BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148484.2 - phase: 0
(192 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g45550 putative protein 63 8e-11
At2g17910 putative non-LTR retroelement reverse transcriptase 60 7e-10
At4g29090 putative protein 59 1e-09
At3g25270 hypothetical protein 58 3e-09
At3g31420 hypothetical protein 56 1e-08
At2g15510 putative non-LTR retroelement reverse transcriptase 56 1e-08
At2g16680 putative non-LTR retroelement reverse transcriptase 55 3e-08
At2g41580 putative non-LTR retroelement reverse transcriptase 54 5e-08
At2g02650 putative reverse transcriptase 54 5e-08
At3g09510 putative non-LTR reverse transcriptase 54 7e-08
At2g25550 putative non-LTR retroelement reverse transcriptase 54 7e-08
At2g45230 putative non-LTR retroelement reverse transcriptase 52 1e-07
At2g34320 putative non-LTR retroelement reverse transcriptase 52 2e-07
At2g31520 putative non-LTR retroelement reverse transcriptase 50 6e-07
At2g01840 putative non-LTR retroelement reverse transcriptase 50 6e-07
At2g15540 putative non-LTR retroelement reverse transcriptase 46 1e-05
At2g33160 putative polygalacturonase 43 9e-05
At2g04420 putative non-LTR retrolelement reverse transcriptase 41 3e-04
At1g24640 hypothetical protein 41 3e-04
At2g06845 putative protein 40 6e-04
>At3g45550 putative protein
Length = 851
Score = 63.2 bits (152), Expect = 8e-11
Identities = 45/148 (30%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSND-DSNIGTVFALLD--MLTTKQRVVFAATVWS 59
H F C FA WRLS S+ SN+ + NI + LL +T Q+++ +W
Sbjct: 717 HALFTCPFATMAWRLSDTPLYRSSILSNNIEDNISNILLLLQNTTITDSQKLIPFWLLWR 776
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEW-QIANTKTPAESRAATTAPPTQLLSNSAE 118
+WK RN V+ ++ E ++ V RA+ EW T+ P TTA
Sbjct: 777 IWKARNNVVFNNLRESPSITVVRAKAETNEWLNATQTQGPRRLPKRTTAA---------- 826
Query: 119 VNSSDDGLVLWQKPTSGRYKCNVDAVFS 146
G W KP KCN DA F+
Sbjct: 827 ------GNTTWVKPQMPYIKCNFDASFN 848
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 60.1 bits (144), Expect = 7e-10
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 22/177 (12%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSNDDSNIGTVFALLDM--LTTKQRVVFAATVWSL 60
H+ F C A QVW ++ L S S +++ +N+ + L L R V +W L
Sbjct: 1074 HILFECPLARQVWAITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWFL 1133
Query: 61 WKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEVN 120
WK+RN ++E + +VD+A EW A T + +
Sbjct: 1134 WKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQTHMQNDEKHLK--------------- 1178
Query: 121 SSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSFPCLH 177
+ W P G KCN+ +S + +G + D +G +L SF +H
Sbjct: 1179 -----ITKWCPPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSRRSFNEVH 1230
>At4g29090 putative protein
Length = 575
Score = 59.3 bits (142), Expect = 1e-09
Identities = 54/188 (28%), Positives = 76/188 (39%), Gaps = 27/188 (14%)
Query: 3 HLFFACSFAIQVWRLS-------GLWSDVSAANSNDDSNIGTVFALLDMLTTKQRVVFAA 55
HL F C+FA W +S G W+D N N+G + K +
Sbjct: 307 HLLFKCTFARLTWAISSIPIPLGGEWADSIYVNLYWVFNLGNGNPQWE----KASQLVPW 362
Query: 56 TVWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSN 115
+W LWK+RN V+ A V+ RA + EW+I +T AES
Sbjct: 363 LLWRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWRI---RTEAES-----------CGT 408
Query: 116 SAEVNSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSFPC 175
+VN S G W+ P KCN DA ++ + R GIG + +E+G + P
Sbjct: 409 KPQVNRSSCGR--WRPPPHQWVKCNTDATWNRDNERCGIGWVLRNEKGEVKWMGARALPK 466
Query: 176 LHQVTVGE 183
L V E
Sbjct: 467 LKSVLEAE 474
>At3g25270 hypothetical protein
Length = 343
Score = 58.2 bits (139), Expect = 3e-09
Identities = 43/168 (25%), Positives = 70/168 (41%), Gaps = 16/168 (9%)
Query: 3 HLFFACSFAIQVWRLSGL-WSDVSAANSNDDSNIGTVFALLDMLTTKQRVVFAATV---W 58
HLFF C +A QVWR SG+ ++ ++ + + L L +Q +F + W
Sbjct: 68 HLFFDCFYAQQVWRASGIPHQELRTTGITMETKMELL--LSSCLANRQPQLFNLAIWILW 125
Query: 59 SLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAE 118
LWK RN V++ + + RAR + EW+ NT + ++ +S+
Sbjct: 126 RLWKSRNQLVFQQKSISWQNTLQRARNDVQEWEDTNTYVQSLNQQV----------HSSR 175
Query: 119 VNSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFV 166
WQ+P S K N D F+ G + DE G ++
Sbjct: 176 HQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRNAKAGWLMRDENGVYM 223
>At3g31420 hypothetical protein
Length = 1491
Score = 55.8 bits (133), Expect = 1e-08
Identities = 45/165 (27%), Positives = 66/165 (39%), Gaps = 15/165 (9%)
Query: 3 HLFFACSFAIQVWRLSGLWSDV-SAANSNDDSNIGTVFALLDMLTTKQRVVFAATVWSLW 61
HLFF C +A WR +GL + + + + +F T R + +W LW
Sbjct: 1218 HLFFECDYAKATWRGAGLPNLIFQDSIVTLEEKFRAMFTFNPSTTNYWRQLPFWILWRLW 1277
Query: 62 KHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEVNS 121
+ RN+ ++ V V A+ EWQ E R P ++ SN N
Sbjct: 1278 RSRNILTFQQKHIPWEVTVQLAKQDALEWQ------DIEDRVQVINPLSRRHSNRYAANR 1331
Query: 122 SDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFV 166
W +P G KCN D +S+ N + G I DE G F+
Sbjct: 1332 -------WTRPVCGWKKCNYDGSYSTIIN-SKAGWVIRDEHGQFI 1368
>At2g15510 putative non-LTR retroelement reverse transcriptase
Length = 1138
Score = 55.8 bits (133), Expect = 1e-08
Identities = 44/174 (25%), Positives = 73/174 (41%), Gaps = 17/174 (9%)
Query: 3 HLFFACSFAIQVWRLSGLWS-DVSAANSNDDSNIGTVFALLDMLTTKQRVV--FAATVWS 59
H+ F CS A QVW LSG+ + + N++ +NI +F L M+ V + +W
Sbjct: 872 HVLFTCSMARQVWALSGVPTPEFGFQNASIFANIQFLFELKKMILVPDLVKRSWPWVLWR 931
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEV 119
LWK+RN ++ +T + + + EW A ++ +S S E
Sbjct: 932 LWKNRNKLFFDGITFCPLNSIVKIQEDTLEWFQAQSQIR--------------VSESEEG 977
Query: 120 NSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSF 173
W+ P G KCN+ + +S G + DE G+ +L +F
Sbjct: 978 QRVIPFTHSWEPPPEGWVKCNIGSAWSGKKKVCGGAWVLRDEHGSVILHSRRAF 1031
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 54.7 bits (130), Expect = 3e-08
Identities = 42/173 (24%), Positives = 68/173 (39%), Gaps = 23/173 (13%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSNDDSNIGTVFALLDM--LTTKQRVVFAATVWSL 60
HL F C FA QVW LS + + + ++ SNI V + R V +W +
Sbjct: 1048 HLLFQCPFARQVWALSLIQAPATGFGTSIFSNINHVIQNSQNFGIPRHMRTVSPWLLWEI 1107
Query: 61 WKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEVN 120
WK+RN +++ ++ +V +A W A K +S V+
Sbjct: 1108 WKNRNKTLFQGTGLTSSEIVAKAYEECNLWINAQEK------------------SSGGVS 1149
Query: 121 SSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSF 173
S+ W P +G KCN+ +S G+ + D G +L S+
Sbjct: 1150 PSEH---KWNPPPAGELKCNIGVAWSRQKQLAGVSWVLRDSMGQVLLHSRRSY 1199
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 53.9 bits (128), Expect = 5e-08
Identities = 41/173 (23%), Positives = 68/173 (38%), Gaps = 23/173 (13%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSNDDSNIGTVFALLDM--LTTKQRVVFAATVWSL 60
H+ F C A QVW L+ + S + +N+ V L+ R V +W L
Sbjct: 825 HILFQCPLARQVWALTPMQSPNHGFGDSIFTNVNHVIGNCHNTELSPHLRYVSPWIIWIL 884
Query: 61 WKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEVN 120
WK+RN +++E + V+ +V +A EW A+ + PT+ L+
Sbjct: 885 WKNRNKRLFEGIGSVSLSIVGKALEDCKEWLKAH-------ELICSKEPTKDLT------ 931
Query: 121 SSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSF 173
W P KCN+ +S G+ + + +G +L SF
Sbjct: 932 --------WIPPLMNELKCNIGIAWSKKHQMAGVSWVVRNWKGRVLLHSRCSF 976
>At2g02650 putative reverse transcriptase
Length = 365
Score = 53.9 bits (128), Expect = 5e-08
Identities = 51/197 (25%), Positives = 77/197 (38%), Gaps = 21/197 (10%)
Query: 3 HLFFACSFAIQVWRLSGLW-SDVSAANSNDDSNIGTVFALLDMLTTKQRVVFAA--TVWS 59
H+ F C + VWR + + + S+ + N+ + L TT F +W
Sbjct: 87 HIMFNCPYTQSVWRSANIIIGNQWGPPSSFEDNLNRLIQLSKTQTTNSLDRFLPFWIMWR 146
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEV 119
LWK RN+ +++ + + TEW AN T + T P +S++
Sbjct: 147 LWKSRNVFLFQQKCQSPDYEARKGIQDATEWLNANETTENTNVHVATNPIQTSRRDSSQ- 205
Query: 120 NSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVL---AKMTSFPC- 175
W P G KCN D+ ++ T G I + G VL AK+ S C
Sbjct: 206 ---------WNPPPEGWVKCNFDSGYTQGSPYTRSGWTIRECNGHIVLCGNAKLQSSTCS 256
Query: 176 LHQVTVGEAMGLFEAFQ 192
LH EA+G A Q
Sbjct: 257 LH----AEALGFLHALQ 269
>At3g09510 putative non-LTR reverse transcriptase
Length = 484
Score = 53.5 bits (127), Expect = 7e-08
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSND-DSNIGTVFALLDMLTTK--QRVVFAATVWS 59
H F C FA WRLS + SND + NI + + T +++ +W
Sbjct: 212 HALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWR 271
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEV 119
+WK RN V+ E + V A+ +W A +S T +P Q+ N E
Sbjct: 272 IWKARNNVVFNKFRESPSKTVLSAKAETHDWLNA-----TQSHKKTPSPTRQIAENKIE- 325
Query: 120 NSSDDGLVLWQKPTSGRYKCNVDAVF 145
W+ P + KCN DA F
Sbjct: 326 ---------WRNPPATYVKCNFDAGF 342
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 53.5 bits (127), Expect = 7e-08
Identities = 40/146 (27%), Positives = 58/146 (39%), Gaps = 18/146 (12%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSND-DSNIGTVFALLDMLTTK--QRVVFAATVWS 59
H F C FA WRLS + SND + NI + + T +++ +W
Sbjct: 1478 HALFTCPFATMAWRLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWR 1537
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEV 119
+WK RN V+ E + V A+ +W A +S T +P Q+ N E
Sbjct: 1538 IWKARNNVVFNKFRESPSKTVLSAKAETHDWLNA-----TQSHKKTPSPTRQIAENKIE- 1591
Query: 120 NSSDDGLVLWQKPTSGRYKCNVDAVF 145
W+ P + KCN DA F
Sbjct: 1592 ---------WRNPPATYVKCNFDAGF 1608
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 52.4 bits (124), Expect = 1e-07
Identities = 44/192 (22%), Positives = 70/192 (35%), Gaps = 29/192 (15%)
Query: 3 HLFFACSFAIQVWRLS-------GLWSDVSAANSNDDSNIGTVFALLDMLTTKQRVVFAA 55
HL F C FA W +S G W++ N + ++ + +
Sbjct: 1104 HLLFKCPFARLTWAISPLPAPPGGEWAESLFRNMHHVLSVHKS----QPEESDHHALIPW 1159
Query: 56 TVWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSN 115
+W LWK+RN V++ A V+ +A + W N K P ++T
Sbjct: 1160 ILWRLWKNRNDLVFKGREFTAPQVILKATEDMDAWN--NRKEPQPQVTSSTR-------- 1209
Query: 116 SAEVNSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSFPC 175
D V WQ P+ G KCN D +S + G+G + + G + + + P
Sbjct: 1210 --------DRCVKWQPPSHGWVKCNTDGAWSKDLGNCGVGWVLRNHTGRLLWLGLRALPS 1261
Query: 176 LHQVTVGEAMGL 187
V E L
Sbjct: 1262 QQSVLETEVEAL 1273
>At2g34320 putative non-LTR retroelement reverse transcriptase
Length = 292
Score = 52.0 bits (123), Expect = 2e-07
Identities = 52/192 (27%), Positives = 72/192 (37%), Gaps = 27/192 (14%)
Query: 3 HLFFACSFAIQVWRLS-------GLWSDVSAANSNDDSNIGTVFALLDMLTTKQRVVFAA 55
HL F C FA VW +S G W+D AN N+ L + +
Sbjct: 24 HLLFKCCFARLVWAISPIPAYPEGEWTDSLYANLYWVLNLEVEIPKLGKIGN----LVPW 79
Query: 56 TVWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSN 115
+W LWK RN +++ A V+ RA EW +T+ E +A+
Sbjct: 80 LLWRLWKSRNELMFKGKEYDAPEVLRRAMEDFEEW---STRRELEGKAS---------GP 127
Query: 116 SAEVNSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSFPC 175
E N S V W+ P KCN DA + R GIG + +E G + + P
Sbjct: 128 QVERNLS----VQWKAPPYQWVKCNTDATWQLENPRCGIGWILRNESGGVLWMGARALPR 183
Query: 176 LHQVTVGEAMGL 187
V E L
Sbjct: 184 TKNVLEAELEAL 195
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 50.4 bits (119), Expect = 6e-07
Identities = 39/146 (26%), Positives = 57/146 (38%), Gaps = 18/146 (12%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSND-DSNIGTVFALLDMLTTKQ--RVVFAATVWS 59
H F C FA W LS + SND + NI + + T +++ +W
Sbjct: 1252 HALFTCPFATMAWWLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWR 1311
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEV 119
+WK RN V+ E + V A+ +W A +S T +P Q+ N E
Sbjct: 1312 IWKARNNVVFNKFRESPSKTVLSAKAETHDWLNA-----TQSHKKTPSPTRQIAENKIE- 1365
Query: 120 NSSDDGLVLWQKPTSGRYKCNVDAVF 145
W+ P + KCN DA F
Sbjct: 1366 ---------WRNPPATYVKCNFDAGF 1382
>At2g01840 putative non-LTR retroelement reverse transcriptase
Length = 1715
Score = 50.4 bits (119), Expect = 6e-07
Identities = 45/194 (23%), Positives = 70/194 (35%), Gaps = 16/194 (8%)
Query: 3 HLFFACSFAIQVWRLSGL-WSDVSAANSNDDSNIGTVFA--LLDMLTTKQRVVFAATVWS 59
H+ F CS+A VWR + S+ N + NI + L ++ +W
Sbjct: 1438 HIIFTCSYAQVVWRSANFSGSNRLCFTDNLEENIRLILQGKKNQNLPILNGLMPFWIMWR 1497
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEV 119
LWK RN +++ + V +A TEW T T + N+A+
Sbjct: 1498 LWKSRNEYLFQQLDRFPWKVAQKAEQEATEW------------VETMVNDTAISHNTAQS 1545
Query: 120 NSSD-DGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSFPCLHQ 178
N W P G KCN D+ + + T G + D G + + +
Sbjct: 1546 NDRPLSRSKQWSSPPEGFLKCNFDSGYVQGRDYTSTGWILRDCNGRVLHSGCAKLQQSYS 1605
Query: 179 VTVGEAMGLFEAFQ 192
EA+G A Q
Sbjct: 1606 ALQAEALGFLHALQ 1619
>At2g15540 putative non-LTR retroelement reverse transcriptase
Length = 1225
Score = 46.2 bits (108), Expect = 1e-05
Identities = 34/120 (28%), Positives = 54/120 (44%), Gaps = 20/120 (16%)
Query: 3 HLFFACSFAIQVWRLSGLWSDVSAANSNDDSNIGTVFALLDMLTTKQRV---------VF 53
HL F C + Q+W LS + S N ++F D L ++ + +F
Sbjct: 976 HLLFLCPPSRQIWALSPIPSSEYIFPRN------SLFYNFDFLLSRGKEFDIAEDIMEIF 1029
Query: 54 AATVWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLL 113
+W +WK RN ++E+V E V++D A W+ AN+K AT PP Q++
Sbjct: 1030 PWILWYIWKSRNRFIFENVIESPQVILDFAIQEANVWKQANSK-----EVATEYPPPQVV 1084
>At2g33160 putative polygalacturonase
Length = 664
Score = 43.1 bits (100), Expect = 9e-05
Identities = 39/171 (22%), Positives = 68/171 (38%), Gaps = 19/171 (11%)
Query: 24 VSAANSNDDSNIGTVFALLDMLTTKQRVVFAATV-WSLWKHRNLKVWEDVTEVAAVVVDR 82
++ +NS + + +F L + T++ + W LW RN+ ++ +
Sbjct: 413 ITDSNSTLEDKMQGIFQLANTTQTQRFHQLPLWILWRLWNSRNILYFQRRHVPWETTLQL 472
Query: 83 ARVMITEWQIANTKTPAESRAATTAPPTQLLSNSAEVNSSDDGLVLWQKPTSGRYKCNVD 142
A++ + EW A T P+ + S+ + S + W++PT+G KCNVD
Sbjct: 473 AQMDLQEWNEAVT-------------PSHINSHGTTIRSH---IPNWRRPTNGWVKCNVD 516
Query: 143 AVF-SSNFNRTGIGICIHDEEGAFVLAKMTSFPCLHQVTVGEAMGLFEAFQ 192
F + N G G + D G + A C+ E L A Q
Sbjct: 517 GSFINGNIPGKG-GWIVRDHNGRYEFAGQAIGNCIDNALECEFQALLMAMQ 566
>At2g04420 putative non-LTR retrolelement reverse transcriptase
Length = 221
Score = 41.2 bits (95), Expect = 3e-04
Identities = 32/136 (23%), Positives = 53/136 (38%), Gaps = 10/136 (7%)
Query: 57 VWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNS 116
+W LW+ RN V++ + RA+ + EW+ N + +S T
Sbjct: 1 MWRLWRSRNQLVFQHQNLSWQSTLKRAKDDVQEWE--NAQEYIQSLNHYTV--------R 50
Query: 117 AEVNSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGICIHDEEGAFVLAKMTSFPCL 176
N+ + W++P G KCN D F+ +T G I D++G + A +
Sbjct: 51 EGCNNRESTHQKWEQPPMGWIKCNYDGSFNYRTQQTNSGWLIRDDKGFYKGAAQAVGGTM 110
Query: 177 HQVTVGEAMGLFEAFQ 192
+ E L A Q
Sbjct: 111 NNALESELQALVMAMQ 126
>At1g24640 hypothetical protein
Length = 1270
Score = 41.2 bits (95), Expect = 3e-04
Identities = 39/137 (28%), Positives = 59/137 (42%), Gaps = 18/137 (13%)
Query: 3 HLFFACSFAIQVWRLSGL-WSDVSAANSNDDSNIGTVFALLDMLTTKQ-----RVVFAAT 56
H F C + Q+W LS + +N + SNI LL+ K+ R +F
Sbjct: 1035 HTLFLCPLSRQIWALSDYPFPPDGFSNGSIYSNINH---LLENKDNKEWPINLRKIFPWI 1091
Query: 57 VWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATTAPPTQLLSNS 116
+W +WK+RN ++E ++ A V + R + EW A + + PP LSN
Sbjct: 1092 LWRIWKNRNSFIFEGISYPATDTVIKIRDDVVEWFEAQC---LDGEGSALNPP---LSNG 1145
Query: 117 AE-VNSSDDGLVLWQKP 132
V S + LW KP
Sbjct: 1146 VHFVGSVSEN--LWIKP 1160
>At2g06845 putative protein
Length = 315
Score = 40.4 bits (93), Expect = 6e-04
Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 3/99 (3%)
Query: 3 HLFFACSFAIQVWRLSGL---WSDVSAANSNDDSNIGTVFALLDMLTTKQRVVFAATVWS 59
H+ F C FA VW + W+ V A + + G A L + WS
Sbjct: 89 HMLFHCQFAQLVWSPTPFARHWASVGAGSVREGLITGCKLACLPPTGIASGPLAPWICWS 148
Query: 60 LWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTP 98
LWK RN KV+ + +A EW A K+P
Sbjct: 149 LWKSRNQKVFSTRFFTPEETLLKAITNAKEWLAAQGKSP 187
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.321 0.130 0.402
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,209,543
Number of Sequences: 26719
Number of extensions: 154604
Number of successful extensions: 600
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 493
Number of HSP's gapped (non-prelim): 80
length of query: 192
length of database: 11,318,596
effective HSP length: 94
effective length of query: 98
effective length of database: 8,807,010
effective search space: 863086980
effective search space used: 863086980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC148484.2