BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148406.1 + phase: 0 
         (114 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g26731 unknown protein                                              78  6e-16
At5g56950 nucleosome assembly protein                                  28  0.74
At5g06320 NDR1/HIN1-like protein 3 (NHL3)                              28  0.74
At5g16690 unknown protein                                              28  0.97
At3g59850 polygalacturonase-like protein                               28  0.97
At3g20960 cytochrome P450 like protein                                 28  0.97
At1g54120 unknown protein                                              27  1.7
At4g26110 nucleosome assembly protein I-like protein                   26  3.7
At4g11260 Sgt1 like protein                                            26  3.7
At5g46670 putative protein                                             25  4.8
At5g65300 unknown protein                                              25  6.3

>At5g26731 unknown protein
          Length = 99

 Score = 78.2 bits (191), Expect = 6e-16
 Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 5/90 (5%)

Query: 9  LFRTESFG-YYNFPDQNYTMIEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLKLRY 67
          +FR+ S G YY  P   Y  +EKRQLFLRSYQF RK+S  E++  S+ R K+VV  +LR 
Sbjct: 6  VFRSTSGGDYYGAPYGEY--MEKRQLFLRSYQFSRKQSFAEKVSRSVTRVKRVVLTRLRS 63

Query: 68 ARGLRRKLVFFPRFKCGFYYRRRRFSQLLN 97
          A  L+R  V + R +  FYYRRRRF +LL+
Sbjct: 64 APKLKR--VVWSRLRSAFYYRRRRFFRLLH 91


>At5g56950 nucleosome assembly protein
          Length = 374

 Score = 28.1 bits (61), Expect = 0.74
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 6/43 (13%)

Query: 44  KSLTERIKGSLVRAKKVVWLKLRYARGLRRKLVFF----PRFK 82
           + +TER +G+L+  K + W K+   +G   KL FF    P FK
Sbjct: 142 EEITERDEGALIYLKDIKWCKIEEPKGF--KLEFFFDQNPYFK 182


>At5g06320 NDR1/HIN1-like protein 3 (NHL3)
          Length = 231

 Score = 28.1 bits (61), Expect = 0.74
 Identities = 13/41 (31%), Positives = 21/41 (50%)

Query: 43  KKSLTERIKGSLVRAKKVVWLKLRYARGLRRKLVFFPRFKC 83
           +K L E +   + R    + LK+R+  GL +   F P+ KC
Sbjct: 166 RKDLNEDVNSQIYRIDAKLRLKIRFKFGLIKSWRFKPKIKC 206


>At5g16690 unknown protein
          Length = 734

 Score = 27.7 bits (60), Expect = 0.97
 Identities = 16/44 (36%), Positives = 23/44 (51%), Gaps = 5/44 (11%)

Query: 21  PDQNYTMIEKRQLFLRSYQFCRKKSLTERIKGSLVRAKKVVWLK 64
           P   +T+  K  LF+RSY  C+  +LT     S VR  K+  L+
Sbjct: 318 PCSGFTVSHKVALFMRSYFLCQDGTLT-----SFVRTLKIACLQ 356


>At3g59850 polygalacturonase-like protein
          Length = 388

 Score = 27.7 bits (60), Expect = 0.97
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 11/56 (19%)

Query: 27  MIEKRQLFLRSYQF----CRKKSLTERIKGSLVR-------AKKVVWLKLRYARGL 71
           ++ K +  LRS  F    C++KS+T RI+G+LV         K+  W+  ++  G+
Sbjct: 59  LVPKGRFLLRSIIFDGSKCKRKSVTFRIQGTLVAPSDYRVIGKENYWILFQHLDGI 114


>At3g20960 cytochrome P450 like protein
          Length = 418

 Score = 27.7 bits (60), Expect = 0.97
 Identities = 22/71 (30%), Positives = 33/71 (45%), Gaps = 3/71 (4%)

Query: 40  FCRKKSLTERIKGSLVRAKKVVWLKLRYARGLRR--KLVFFPRFKCGFYYRRRRFSQLLN 97
           F  +    ER++G LV     +  K+ +A  LRR  K +  P FK        RF++LL 
Sbjct: 99  FSEENGEAERVRG-LVAESYALAKKIFFASVLRRLLKKLRIPLFKKDIMDVSNRFNELLE 157

Query: 98  NSGSSHHRKVD 108
                H+ K+D
Sbjct: 158 KILVEHNEKLD 168


>At1g54120 unknown protein
          Length = 124

 Score = 26.9 bits (58), Expect = 1.7
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 54 LVRAKKVVWLKLRYARGLRRKLVFF 78
          +VR  K+ WLKL Y R +++  VF+
Sbjct: 49 MVRRMKLRWLKLHYVRVVKKIKVFY 73


>At4g26110 nucleosome assembly protein I-like protein
          Length = 372

 Score = 25.8 bits (55), Expect = 3.7
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 6/43 (13%)

Query: 44  KSLTERIKGSLVRAKKVVWLKLRYARGLRRKLVFF----PRFK 82
           + +TER +G+L   K + W K+   +G   KL FF    P FK
Sbjct: 143 EEVTERDEGALKYLKDIKWCKIEEPKGF--KLEFFFDTNPYFK 183


>At4g11260 Sgt1 like protein
          Length = 358

 Score = 25.8 bits (55), Expect = 3.7
 Identities = 9/30 (30%), Positives = 18/30 (60%)

Query: 41  CRKKSLTERIKGSLVRAKKVVWLKLRYARG 70
           CR + L+ +++  L +A+ + W  L Y +G
Sbjct: 221 CRFEVLSTKVEIRLAKAEIITWASLEYGKG 250


>At5g46670 putative protein
          Length = 332

 Score = 25.4 bits (54), Expect = 4.8
 Identities = 10/20 (50%), Positives = 14/20 (70%)

Query: 14  SFGYYNFPDQNYTMIEKRQL 33
           SFG Y+F D++Y  I+ R L
Sbjct: 270 SFGVYSFEDRDYNWIDVRAL 289


>At5g65300 unknown protein
          Length = 150

 Score = 25.0 bits (53), Expect = 6.3
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 44  KSLTERIKGSLVRAKKVVWLKLRYARG 70
           K  TE++K + V+ K   W KL + +G
Sbjct: 106 KKKTEKLKSTTVKKKTGFWTKLLHLKG 132


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.329    0.140    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,572,387
Number of Sequences: 26719
Number of extensions: 91002
Number of successful extensions: 222
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 211
Number of HSP's gapped (non-prelim): 11
length of query: 114
length of database: 11,318,596
effective HSP length: 90
effective length of query: 24
effective length of database: 8,913,886
effective search space: 213933264
effective search space used: 213933264
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 52 (24.6 bits)