BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148404.5 - phase: 0
(192 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g33280 hypothetical protein 119 1e-27
At4g34400 putative protein 72 1e-13
At5g66980 putative protein 64 4e-11
At3g06220 hypothetical protein 64 5e-11
At3g06160 hypothetical protein 63 8e-11
At5g60130 putative protein 62 1e-10
At3g53310 unknown protein 60 9e-10
At3g18990 unknown protein 59 2e-09
At1g49475 putative protein 58 4e-09
At5g60140 putative protein 55 2e-08
At5g57720 putative protein 55 2e-08
At3g18960 unknown protein 53 1e-07
At4g01580 hypothetical protein 52 1e-07
At2g16210 unknown protein 52 3e-07
At2g35310 Unknown protein 48 3e-06
At3g17010 hypothetical protein 46 1e-05
At5g18000 putative protein 46 1e-05
At5g18090 unknown protein 45 2e-05
At1g16640 Unknown protein 45 2e-05
At4g31640 unknown protein (At4g31640) 45 2e-05
>At4g33280 hypothetical protein
Length = 461
Score = 119 bits (298), Expect = 1e-27
Identities = 62/138 (44%), Positives = 88/138 (62%), Gaps = 8/138 (5%)
Query: 4 ILIWKFILLLQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG-FVYFVDGWQQF 62
I I F LLQ +P+ FS + +KLP+ VTLK PSGVT+N+ + D + F GW +F
Sbjct: 96 IKITTFCNLLQVIPRKFSTHCKRKLPQIVTLKSPSGVTYNVGVEEDDEKTMAFRFGWDKF 155
Query: 63 MNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQG-------G 115
+ DHSL+ ND LV K++G S FEVL+FDG++ CEK SYFV KCGHA+ +G
Sbjct: 156 VKDHSLEENDLLVFKFHGVSEFEVLVFDGQTLCEKPTSYFVRKCGHAEKTKGIIDFNATS 215
Query: 116 SNASETNNSIEEVDTDSN 133
S + + + + ++V+T N
Sbjct: 216 SRSPKRHFNPDDVETTPN 233
>At4g34400 putative protein
Length = 389
Score = 72.4 bits (176), Expect = 1e-13
Identities = 36/103 (34%), Positives = 53/103 (50%), Gaps = 1/103 (0%)
Query: 2 FLILIWKFILLLQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQ 61
F + + F +P ++ D++ + P+ V L+GP G +W + +D V F GW +
Sbjct: 17 FTVFVSHFSSEFMVIPVSYYDHIPHRFPKTVILRGPGGCSWKVATEIKDDEVLFSQGWPK 76
Query: 62 FMNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASYFVE 104
F+ D++L DFL YNG FEV IF G C KE S E
Sbjct: 77 FVRDNTLNDGDFLTFAYNGAHIFEVSIFRGYDAC-KEISEVTE 118
>At5g66980 putative protein
Length = 334
Score = 64.3 bits (155), Expect = 4e-11
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG----FVYFVDGWQQFMNDHSLKAN 71
+P F D L K LP+ L G W + T D V+F GWQ F ND SL+
Sbjct: 25 IPPAFIDMLEKPLPKEAFLVDEIGRLWCVETKTEDTEERFCVFFTKGWQSFANDQSLEFG 84
Query: 72 DFLVCKYNGESHFEVLIFDGESFCEKE 98
DFLV Y+G+S F V IF + C+K+
Sbjct: 85 DFLVFSYDGDSRFSVTIFANDG-CKKD 110
>At3g06220 hypothetical protein
Length = 175
Score = 63.9 bits (154), Expect = 5e-11
Identities = 37/138 (26%), Positives = 63/138 (44%), Gaps = 3/138 (2%)
Query: 13 LQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKAND 72
L+ +P+++ ++L ++LP+ L G G W + + ++ VY GW+ F+ D+ LK +
Sbjct: 23 LKLIPRSYYEHLPRRLPKTAILTGTGGRVWKVAMMSKREQVYLARGWENFVADNELKDGE 82
Query: 73 FLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQG---GSNASETNNSIEEVD 129
FL ++G +EV I+ S E A VE+ + GS T EE
Sbjct: 83 FLTFVFDGYKSYEVSIYGRGSCKETRAVVHVEEISDESESDNDSLGSLVDVTPMPAEENS 142
Query: 130 TDSNGGDSPEQFTDDAVP 147
D+ G + D P
Sbjct: 143 DDTEGDNDSCDSVVDVTP 160
>At3g06160 hypothetical protein
Length = 330
Score = 63.2 bits (152), Expect = 8e-11
Identities = 35/122 (28%), Positives = 59/122 (47%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P+++ + L + LP+ L G G W + +T++ VYF GW F+ D+ LK +FL
Sbjct: 40 IPRSYYNLLPRPLPKTAILIGTGGRFWKVAMTSKQEQVYFEQGWGNFVADNQLKEGEFLT 99
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
++G +EV I+ E A VE+ S S +N S++ + DS+
Sbjct: 100 FVFDGHKSYEVSIYGRGDCKETRAVIQVEEISDDTEDDNVSLHSPSNVSLDSLSNDSHHS 159
Query: 136 DS 137
S
Sbjct: 160 TS 161
>At5g60130 putative protein
Length = 300
Score = 62.4 bits (150), Expect = 1e-10
Identities = 43/137 (31%), Positives = 69/137 (49%), Gaps = 9/137 (6%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDG------FVYFVDGWQQFMNDHSLK 69
LP +F+ L K LPE VT++ SG W + L G FV V+GW++ + D LK
Sbjct: 3 LPISFTRFLPKSLPETVTVRSISGNIWKLELKKCCGDDDTEKFV-MVNGWKRIVKDEDLK 61
Query: 70 ANDFLVCKYNGESHFEVLIFDGESFCEK--EASYFVEKCGHAQTAQGGSNASETNNSIEE 127
DFL +++G S F I++ + C+K +S E+ + + AS+ S++E
Sbjct: 62 GGDFLEFEFDGSSCFHFCIYEHRTMCKKIRRSSDQSEEIKVESDSDEQNQASDDVLSLDE 121
Query: 128 VDTDSNGGDSPEQFTDD 144
D DS+ + +DD
Sbjct: 122 DDDDSDYNCGEDNDSDD 138
>At3g53310 unknown protein
Length = 286
Score = 59.7 bits (143), Expect = 9e-10
Identities = 37/148 (25%), Positives = 60/148 (40%), Gaps = 3/148 (2%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F L LP+ V L+G G W + L G Y GW +F +H LK +F+
Sbjct: 26 IPLPFMAFLADPLPKTVKLQGLGGKLWTVSLKKISGAAYLTRGWPKFAEEHELKNGEFMT 85
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
Y+G FEV +FD E A + + S + +S + V+ D +
Sbjct: 86 FVYDGHRTFEVSVFDRWGSKEVRAEI---QAIPLSDSDSDSVVEDEKDSTDVVEDDDDED 142
Query: 136 DSPEQFTDDAVPKTTAIQSPFIPTGKRT 163
+ ++ D + + I P + T
Sbjct: 143 EDEDEDDDGSFDEDEEISQSLYPIDEET 170
>At3g18990 unknown protein
Length = 341
Score = 58.9 bits (141), Expect = 2e-09
Identities = 47/174 (27%), Positives = 72/174 (41%), Gaps = 21/174 (12%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F +L V L P G W + L D ++F DGWQ+F++ +S++ L+
Sbjct: 22 VPDKFVSKFKDELSVAVALTVPDGHVWRVGLRKADNKIWFQDGWQEFVDRYSIRIGYLLI 81
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
+Y G S F V IF + E +Y G +A + +E+ D +
Sbjct: 82 FRYEGNSAFSVYIF---NLSHSEINY--HSTGLMDSAHNHFKRARLFEDLEDEDAEVIFP 136
Query: 136 DS--PEQFTDDAVP-----KTTAIQSPF---------IPTGKRTKRRRRSPKAA 173
S P + VP ++AIQ+ F PT K K+R R K A
Sbjct: 137 SSVYPSPLPESTVPANKGYASSAIQTLFTGPVKAEEPTPTPKIPKKRGRKKKNA 190
>At1g49475 putative protein
Length = 250
Score = 57.8 bits (138), Expect = 4e-09
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 19/142 (13%)
Query: 3 LILIWKFILLLQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQF 62
+IL+ + I + +P F KL +NVTL+ P G +IR+ V+F GW +F
Sbjct: 37 IILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGDEVWFEKGWSEF 95
Query: 63 MNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETN 122
HSL FL Y G+S F V+IFD + E Y ++ +T+
Sbjct: 96 AEAHSLSDGHFLFFHYEGDSCFRVVIFDVSA---SEIEYPLD---------------DTD 137
Query: 123 NSIEEVDTDSNGGDSPEQFTDD 144
++ EEV D G + + +DD
Sbjct: 138 DNREEVMDDDEQGFTGFESSDD 159
>At5g60140 putative protein
Length = 328
Score = 55.5 bits (132), Expect = 2e-08
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFV---YFVDGWQQFMNDHSLKAND 72
LP +F+ L K LP+ VT++ SG W + G V V GW++ + D +L D
Sbjct: 30 LPISFNSCLPKSLPKTVTVRSISGNIWKLGFKKCGGEVERFVMVSGWKKIVRDENLNGGD 89
Query: 73 FLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEV---- 128
L +++G F IFD E+ C++ + + GS+ E + + ++V
Sbjct: 90 LLSFEFDGSHFFNFSIFDHETTCKRLKRSSEQS---KDIIKVGSDCEEESQASDDVIVLN 146
Query: 129 DTDSNGGDSPEQFTDDAV 146
DS+ D+ DD V
Sbjct: 147 SDDSDDSDNDYSVEDDNV 164
>At5g57720 putative protein
Length = 300
Score = 55.1 bits (131), Expect = 2e-08
Identities = 41/147 (27%), Positives = 63/147 (41%), Gaps = 10/147 (6%)
Query: 13 LQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLT-TRDGFVYFVDGWQQFMNDHSLKAN 71
L +P++++ LP+ LK P G WN++ T +++ + +GW +F+ D+ L
Sbjct: 25 LLVIPRSYNRYYPNPLPQTAVLKNPEGRFWNVQWTKSQEVIISLQEGWVKFVKDNGLIDR 84
Query: 72 DFLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTD 131
DFL+ Y+G F V I E A +++ + G EE DTD
Sbjct: 85 DFLLFTYDGSRSFWVRIHRNGLPLEPTAPIKIQEISDDEDETNGDGDPHME---EEGDTD 141
Query: 132 SNG------GDSPEQFTDDAVPKTTAI 152
N G S E DD TAI
Sbjct: 142 ENMIVSLSLGSSDEVGDDDDDDYDTAI 168
>At3g18960 unknown protein
Length = 209
Score = 52.8 bits (125), Expect = 1e-07
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 13 LQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKAND 72
+ +P F KL E VTL+ P+G +I+L ++F +GW +F HS++
Sbjct: 43 MMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGH 102
Query: 73 FLVCKYNGESHFEVLIFDGESFCE 96
FL+ +Y S F V+IF+ S CE
Sbjct: 103 FLLFEYKENSSFRVIIFN-VSACE 125
>At4g01580 hypothetical protein
Length = 190
Score = 52.4 bits (124), Expect = 1e-07
Identities = 29/84 (34%), Positives = 44/84 (51%), Gaps = 1/84 (1%)
Query: 13 LQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKAND 72
+ +P F KL E VTL P+G +I+L ++F +GW +F HS++
Sbjct: 43 MMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGEEIWFHEGWSEFAEAHSIEEGH 102
Query: 73 FLVCKYNGESHFEVLIFDGESFCE 96
FL+ +Y S F V+IF+ S CE
Sbjct: 103 FLLFEYKKNSSFRVIIFNA-SACE 125
>At2g16210 unknown protein
Length = 291
Score = 51.6 bits (122), Expect = 3e-07
Identities = 46/166 (27%), Positives = 79/166 (46%), Gaps = 27/166 (16%)
Query: 14 QALPKTFSDNL-NKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVD--GWQQFMNDHSLKA 70
+ALP FS + +K+L + ++ G +W + ++ F YF++ GW++F+ D++L
Sbjct: 34 RALPHDFSRSFTDKELSRKMKIRAQWGNSWEVGISKNPRF-YFMEKSGWEKFVRDNALGN 92
Query: 71 NDFLVCKYNGESHFEVLIF--DGESFCE-KEASYFVEKCGHAQTAQGGSNASETNNSIEE 127
++ L + G+ HF V IF DG+ + ++ F +T Q E N+ EE
Sbjct: 93 SELLTFTHKGKMHFTVNIFKLDGKEMMQPPQSRSFFASSSRIKTEQ------EENDIKEE 146
Query: 128 VDTDSNGGDSPEQFTDDAVPKTTAIQSP--FIPTGKRTKRRRRSPK 171
V SN G +TTA +S + GKR + +S K
Sbjct: 147 VVVSSNRG------------QTTAAESKGRKLNLGKRAAKESQSSK 180
>At2g35310 Unknown protein
Length = 288
Score = 48.1 bits (113), Expect = 3e-06
Identities = 36/129 (27%), Positives = 64/129 (48%), Gaps = 13/129 (10%)
Query: 13 LQALPKTFSDNL-NKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVD--GWQQFMNDHSLK 69
++ALP F + N +L + +K G +W + + F YF++ GW++F++D++L
Sbjct: 33 MRALPYDFVRSFSNNELSRKMKIKARWGSSWEVEICKNPRF-YFMEKSGWEKFVSDNALG 91
Query: 70 ANDFLVCKYNGESHFEVLIF--DGESFCEKEASY-FVEKCGHAQTAQGGSNASETNNSIE 126
A++FL + G F V IF DG+ + S F+ + QG + + T
Sbjct: 92 ASEFLTFTHKGNMRFTVNIFMQDGKEMLQPPQSMSFMASSRPPKREQGIPSLATT----- 146
Query: 127 EVDTDSNGG 135
+ +SNGG
Sbjct: 147 -IAAESNGG 154
>At3g17010 hypothetical protein
Length = 302
Score = 46.2 bits (108), Expect = 1e-05
Identities = 28/128 (21%), Positives = 57/128 (43%), Gaps = 7/128 (5%)
Query: 13 LQALPKTFSDNLNKK-LPENVTLKGPSGVTWNIRLTTRDGFVYF-VDGWQQFMNDHSLKA 70
++ALP +F +++K + ++ G TW++ ++ + Y GW F++D++L
Sbjct: 35 MRALPYSFISKVSEKDFSYKMVIRAQWGKTWDVEVSKNPTYYYIETRGWDLFVSDNALGQ 94
Query: 71 NDFLVCKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDT 130
N+F+ + G F V I++ ++ F G E NS+ +V
Sbjct: 95 NEFITFTHRGNMVFHVNIYEQNGLEMRKPRKF-----QTMGPSSGIKKEEGENSLIDVKK 149
Query: 131 DSNGGDSP 138
+ +SP
Sbjct: 150 EEESDESP 157
Score = 33.9 bits (76), Expect = 0.054
Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 2/96 (2%)
Query: 2 FLILIWKFILLLQALPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQ 61
F I I K L A+PK F D+ + T++ P+G +W + R+ F G+ +
Sbjct: 202 FKITIRKSYLKFLAIPKHFVDDHIPNKSKIFTIRHPNGGSWKVLCLVREIRTIFSGGYSK 261
Query: 62 FMNDHSLKANDFLVCKYNGESHFEVLIFDGESFCEK 97
+ L D C + FE ++ + EK
Sbjct: 262 LAREFPLMVGD--KCTFKLIKPFEFVLLTSKKNREK 295
>At5g18000 putative protein
Length = 307
Score = 45.8 bits (107), Expect = 1e-05
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 32 VTLKGPSGVTWNIRLTTRDGFVYFVD-GWQQFMNDHSLKANDFLVCKYNGESHFEVLIFD 90
+ L+ P G +W ++++ F Y D GW QF+ND+ L N++L + F V IF+
Sbjct: 54 MVLRVPWGRSWQVKISKNPNFHYMEDRGWNQFVNDNGLGENEYLTFTHEANMCFNVTIFE 113
Query: 91 GE 92
+
Sbjct: 114 AD 115
>At5g18090 unknown protein
Length = 301
Score = 45.4 bits (106), Expect = 2e-05
Identities = 40/166 (24%), Positives = 76/166 (45%), Gaps = 20/166 (12%)
Query: 12 LLQALPKTFSDNLNKK-LPENVTLKGPSGVTWNIRLTTRDGFVYFVD--GWQQFMNDHSL 68
+++ +P F +++++ L + LK G +W I++ F YF++ GW QF++D+ L
Sbjct: 31 IMRGIPLNFIKSISEEELSAKMLLKVSWGSSWPIKICRNPSF-YFMEKKGWDQFLSDNGL 89
Query: 69 KANDFLVCKYNGESHFEVLIF--DGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIE 126
++FL + G F V I+ DG+ S + + G N E N+I
Sbjct: 90 GNDEFLTFTHQGNMCFTVDIYQIDGKELLTPRRSATI-------ASSSGRNKREQRNNIY 142
Query: 127 EVDTDSNGGDSPEQFTDDAVPKTTAIQSPFIPTGKRTKRRRRSPKA 172
+ D + E +++ + P +S TG+R + + KA
Sbjct: 143 K---DVKEEEDIESWSESSYPGHKTAES----TGRRQRLSLSNKKA 181
>At1g16640 Unknown protein
Length = 134
Score = 45.4 bits (106), Expect = 2e-05
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 1/82 (1%)
Query: 16 LPKTFSDNLNKKLPENVTLKGPSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
+P F++ P V L SG +W +R+ R V+ GW+ F+ D++L+ +L
Sbjct: 24 IPLGFNEYFPAPFPITVDLLDYSGRSWTVRMKKRGEKVFLTVGWENFVKDNNLEDGKYLQ 83
Query: 76 CKYNGESHFEVLIFDGESFCEK 97
Y+ + F V+I+ G + C +
Sbjct: 84 FIYDRDRTFYVIIY-GHNMCSE 104
>At4g31640 unknown protein (At4g31640)
Length = 352
Score = 45.1 bits (105), Expect = 2e-05
Identities = 35/129 (27%), Positives = 57/129 (44%), Gaps = 13/129 (10%)
Query: 18 KTFSDNLNKKLPEN-VTLKG-PSGVTWNIRLTTRDGFVYFVDGWQQFMNDHSLKANDFLV 75
K FS ++ K N V L+ PS TW +++ +GW++F+ H L+ DF+V
Sbjct: 31 KFFSKHIEGKHEGNTVYLRSYPSRRTWKVKMEGHK----LTEGWKEFVEAHDLRVGDFVV 86
Query: 76 CKYNGESHFEVLIFDGESFCEKEASYFVEKCGHAQTAQGGSNASETNNSIEEVDTDSNGG 135
K+ G+ F V G S CE + + H + + + N E + N
Sbjct: 87 FKHKGDMLFHVTAI-GPSCCEVQ---YAPSRSHDRNEESDEIGESSRN---EKIIEENVK 139
Query: 136 DSPEQFTDD 144
P+QF+ D
Sbjct: 140 TEPDQFSPD 148
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.317 0.134 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,841,943
Number of Sequences: 26719
Number of extensions: 212576
Number of successful extensions: 752
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 687
Number of HSP's gapped (non-prelim): 75
length of query: 192
length of database: 11,318,596
effective HSP length: 94
effective length of query: 98
effective length of database: 8,807,010
effective search space: 863086980
effective search space used: 863086980
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)
Medicago: description of AC148404.5