BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148360.12 + phase: 0 /pseudo
         (102 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g11780 putative protein                                             47  2e-06
At3g14970 hypothetical protein                                         27  1.3
At5g26740 unknown protein                                              27  1.7
At1g23390 unknown protein                                              27  2.2
At2g25440 putative disease resistance protein                          26  2.9
At5g59810 subtilisin-like protease - like protein                      26  3.8
At3g07690 putative glycerol-3-phosphate dehydrogenase                  26  3.8
At3g11830 putative T-complex protein 1, ETA subunit                    25  5.0
At1g42650 unknown protein                                              25  6.5
At1g31840 hypothetical protein                                         25  8.5

>At5g11780 putative protein
          Length = 494

 Score = 46.6 bits (109), Expect = 2e-06
 Identities = 31/105 (29%), Positives = 53/105 (49%), Gaps = 14/105 (13%)

Query: 7   PPFDVIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASVGGSKSIALLAP---- 62
           PP +++W YSAI+F   K    D  + +      FQLI + S S  G K ++LL+P    
Sbjct: 57  PPLELVWFYSAIRFYSSKLAFRD--DSVRLTSCFFQLIVSFSDSFSGVKKVSLLSPVVYQ 114

Query: 63  ------KAMKEVKSLVDMILGFMSICC--SKISEEKDLDLVLSFS 99
                    ++  SL++ I+ ++S+ C     +E+ D+ +V  FS
Sbjct: 115 LSRLVISRRRDALSLLEGIVSYISMYCVDEPGNEDDDVLMVSGFS 159


>At3g14970 hypothetical protein
          Length = 220

 Score = 27.3 bits (59), Expect = 1.3
 Identities = 14/37 (37%), Positives = 22/37 (58%), Gaps = 2/37 (5%)

Query: 61  APKAMKEVKSLVDMILGFMSICCSKISEEKDLDLVLS 97
           AP+ +  V  L+D IL      C KIS  K++D+V++
Sbjct: 95  APRYIDVVTELIDAILDLKK--CDKISNVKEVDVVIN 129


>At5g26740 unknown protein
          Length = 422

 Score = 26.9 bits (58), Expect = 1.7
 Identities = 15/51 (29%), Positives = 29/51 (56%), Gaps = 1/51 (1%)

Query: 23  RKSLKGDILEQISAAKALFQLISACSASVGGSKSIAL-LAPKAMKEVKSLV 72
           + S+  D + ++  A  ++  +S C A VGG  S+ L L+ +++K   SL+
Sbjct: 66  KSSIYFDSIREVYEAWVIYNFLSLCLAWVGGPGSVVLSLSGRSLKPSWSLM 116


>At1g23390 unknown protein
          Length = 394

 Score = 26.6 bits (57), Expect = 2.2
 Identities = 13/33 (39%), Positives = 19/33 (57%)

Query: 25 SLKGDILEQISAAKALFQLISACSASVGGSKSI 57
          S+ GDILE I +   L  L SAC  S   ++++
Sbjct: 19 SIDGDILESILSYLPLLDLDSACQVSKSWNRAV 51


>At2g25440 putative disease resistance protein
          Length = 671

 Score = 26.2 bits (56), Expect = 2.9
 Identities = 25/62 (40%), Positives = 34/62 (54%), Gaps = 7/62 (11%)

Query: 11  VIWVYSAIKFGCRKSLKGDILEQISAAKALFQLISACSASVGG-SKSIALLAPKAMKEVK 69
           V+  YSAI F  R  L+G+I E I   KAL  L  + +A  G   +S+A L     KE++
Sbjct: 487 VLTSYSAIDFS-RNLLEGNIPESIGLLKALIALNLSNNAFTGHIPQSLANL-----KELQ 540

Query: 70  SL 71
           SL
Sbjct: 541 SL 542


>At5g59810 subtilisin-like protease - like protein
          Length = 778

 Score = 25.8 bits (55), Expect = 3.8
 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 24  KSLKGDILEQISAAKALFQLISACSASV-GGSKSIALLAPKAMKEVKSLVDMIL 76
           +S KG  L +    + ++ LISA  A+V  G+ + ALL  K   + K +   IL
Sbjct: 373 QSFKGTSLSKPLPEEKMYSLISAADANVANGNVTDALLCKKGSLDPKKVKGKIL 426


>At3g07690 putative glycerol-3-phosphate dehydrogenase
          Length = 455

 Score = 25.8 bits (55), Expect = 3.8
 Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)

Query: 25  SLKGD-ILEQISAAKALFQLISACSASVGGSKSIALLAPKAMKEVKSLVDMILGFMSICC 83
           S+KG  +++ +SA KA F+L++  S S+   +    + P  +  +  ++  IL      C
Sbjct: 359 SIKGKGMIQGVSAVKAFFELLNQSSLSLQHPEEGKPVTPAELCPILKMLYRILITREFSC 418

Query: 84  SKISE 88
             I E
Sbjct: 419 EAILE 423


>At3g11830 putative T-complex protein 1, ETA subunit
          Length = 557

 Score = 25.4 bits (54), Expect = 5.0
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 36  AAKALFQLISACSASVG-GSKSIALLAPKAMKEVKSLVD 73
           AAK L  +  +  + VG G+ ++ LLA + +KE K  ++
Sbjct: 78  AAKILVDIAKSQDSEVGDGTTTVVLLAAEFLKEAKPFIE 116


>At1g42650 unknown protein
          Length = 593

 Score = 25.0 bits (53), Expect = 6.5
 Identities = 12/36 (33%), Positives = 19/36 (52%)

Query: 67  EVKSLVDMILGFMSICCSKISEEKDLDLVLSFSSLG 102
           E   +VDM + F  +C  K +  K  D+V++   LG
Sbjct: 28  ERDDVVDMAVVFYEVCILKGAHAKAKDVVITVKKLG 63


>At1g31840 hypothetical protein
          Length = 845

 Score = 24.6 bits (52), Expect = 8.5
 Identities = 11/26 (42%), Positives = 14/26 (53%)

Query: 22  CRKSLKGDILEQISAAKALFQLISAC 47
           C K LKG  ++QI  A  L  L+  C
Sbjct: 255 CNKVLKGLSVDQIEVASRLLSLVLDC 280


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.321    0.135    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,119,547
Number of Sequences: 26719
Number of extensions: 62732
Number of successful extensions: 164
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 158
Number of HSP's gapped (non-prelim): 10
length of query: 102
length of database: 11,318,596
effective HSP length: 78
effective length of query: 24
effective length of database: 9,234,514
effective search space: 221628336
effective search space used: 221628336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)