BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148345.6 + phase: 0 
         (570 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g57620 putative protein                                            697  0.0
At1g14430 hypothetical protein                                        598  e-171
At1g19900 unknown protein                                             567  e-162
At1g75620 unknown protein                                             565  e-161
At3g53950 unknown protein                                             434  e-122
At5g19580 putative protein                                            431  e-121
At1g67290 unknown protein                                             427  e-120
At1g70280 NHL repeat-containing protein                                35  0.15
At5g32640 putative protein                                             34  0.19
At1g23880 unknown protein                                              32  1.2
At5g41960 unknown protein                                              31  2.1
At2g05220 40S ribosomal protein S17                                    31  2.1
rpoC2 -chloroplast genome- RNA polymerase beta' subunit-2              30  2.8
At5g55020 putative transcription factor MYB120 (MYB120)                30  2.8
At4g02070 G/T DNA mismatch repair enzyme                               30  2.8
At3g19120 unknown protein                                              30  3.6
At3g02150 unknown protein                                              30  3.6
At5g27820 putative protein                                             30  4.7
At4g29880 putative protein                                             30  4.7
At5g26780 glycine hydroxymethyltransferase - like protein              29  6.2

>At3g57620 putative protein
          Length = 547

 Score =  697 bits (1799), Expect = 0.0
 Identities = 336/523 (64%), Positives = 412/523 (78%), Gaps = 17/523 (3%)

Query: 51  WELIQPTIGISAMHMQLSHNNKIIIFDRTDFGPSNLPLSNGRCRMDPFDTALKIDCTAHS 110
           WE++ P+IGISAMHMQL HN  +I+FDRTDFG SN+ L  G CR DP DTA K DC+AHS
Sbjct: 37  WEMLLPSIGISAMHMQLLHNGMVIMFDRTDFGTSNVSLPGGICRYDPTDTAEKFDCSAHS 96

Query: 111 VLYDIATNTFRSLTVQTDTWCSSGSVLSNGTLVQTGGFNDGERRIRMFTPC-FNENCDWI 169
           VLYD+ +NT+R L VQTDTWCSSG+VL NGTLVQTGG+NDGER  RMF+PC +++ CDWI
Sbjct: 97  VLYDVVSNTYRPLNVQTDTWCSSGAVLPNGTLVQTGGYNDGERAARMFSPCGYSDTCDWI 156

Query: 170 EFPSYLSERRWYATNQILPDNRIIIIGGRRQFNYEFIPKTTTSSSSSSSSSIHLSFLQET 229
           EFP YLS+RRWYATNQILPD RII++GGRRQFNYE  P+  + S SS      L FL+ET
Sbjct: 157 EFPQYLSQRRWYATNQILPDGRIIVVGGRRQFNYELFPRHDSRSRSS-----RLEFLRET 211

Query: 230 NDPS-ENNLYPFVHLLPNGNLFIFANTRSILFDYKQNVVVKEFPEIPGGDPHNYPSSGSS 288
           +D S ENNLYPF+HLLP+GNLF+FANTRSI+FDYK+N +VKEFPEIPGGDP NYPSSGSS
Sbjct: 212 SDGSNENNLYPFIHLLPDGNLFVFANTRSIVFDYKKNRIVKEFPEIPGGDPRNYPSSGSS 271

Query: 289 VLLPLDE-NQISMEATIMICGGAPRGSFEAAKGKNFMPALKTCGFLKVTDSNPSWIIENM 347
           +L PLD+ N  ++E  IM+CGG+P+G F     + F  A  TCG LK++D +PSW +E M
Sbjct: 272 ILFPLDDTNDANVEVEIMVCGGSPKGGF----SRGFTRATSTCGRLKLSDQSPSWEMETM 327

Query: 348 PMARVMGDMLILPNGDVIIINGAGSGTAGWENGRQPVLTPVIFRSSETKSDKRFSVMSPA 407
           P+ RVMGDML+LP GDVII+NGAG+GTAGWE  R P++ PVI++      D  F+VMS  
Sbjct: 328 PLPRVMGDMLLLPTGDVIIVNGAGAGTAGWEKARDPIIQPVIYQ----PFDHLFTVMSTP 383

Query: 408 SRPRLYHSSAIVLRDGRVLVGGSNPHVNYNFTGVEFPTDLSLEAFSPPYLSLEFDLVRPT 467
           SRPR+YHSSAI+L DGRVLVGGSNPHV YNFT VE+PTDLSLEA+SPPYL    D +RP 
Sbjct: 384 SRPRMYHSSAILLPDGRVLVGGSNPHVYYNFTNVEYPTDLSLEAYSPPYLFFTSDPIRPK 443

Query: 468 IWHVTNKILGYRVFYYVTFTVAKFASASEVSVRLLAPSFTTHSFGMNQRMVVLKLIGVTM 527
           I   ++K+L Y+  + V F++A+F +   +SVR++APSFTTHSF MNQRMV+LKL+ VT 
Sbjct: 444 ILLTSDKVLSYKRLFNVDFSIAQFLTVDLLSVRIVAPSFTTHSFAMNQRMVILKLLSVTR 503

Query: 528 VNL-DIYYATVVGPSTQEIAPPGYYLLFLVHAGVPSSGEWVQL 569
             L + Y  + +GPST EIAPPGYY++FLVHAG+PSS  WVQ+
Sbjct: 504 DQLTNSYRVSALGPSTAEIAPPGYYMIFLVHAGIPSSAAWVQI 546


>At1g14430 hypothetical protein
          Length = 849

 Score =  598 bits (1543), Expect = e-171
 Identities = 304/567 (53%), Positives = 401/567 (70%), Gaps = 35/567 (6%)

Query: 16  LIPHFHILIVSSSSSSPSPSPLPSLLSSPSSNQGEWELIQPTIGISAMHMQLSHNNKIII 75
           +I  F   + S+S      SPL  L        G W+L+QP++GISAMHMQL HNNK++I
Sbjct: 14  VISFFFFFLCSTSDLLLPRSPLAILTG------GRWDLLQPSVGISAMHMQLLHNNKVVI 67

Query: 76  FDRTDFGPSNLPLSNGRCRMDPFDTALKIDCTAHSVLYDIATNTFRSLTVQTDTWCSSGS 135
           FDRTD+GPSN+ L +  C+      A   DC+AHS+LYD+A+NTFR LT++ DTWCSSGS
Sbjct: 68  FDRTDYGPSNVSLPSQTCQ-----NATVFDCSAHSILYDVASNTFRPLTLRYDTWCSSGS 122

Query: 136 VLSNGTLVQTGGFNDGERRIRMFTPCF----NENCDWIEFPSYLSERRWYATNQILPDNR 191
           + ++G+L+QTGG+ +GER +R+FTPC     + +CDWIE  +YLS RRWY+TNQILPD R
Sbjct: 123 LNASGSLIQTGGYGNGERTVRVFTPCDGGVGSVSCDWIENRAYLSSRRWYSTNQILPDGR 182

Query: 192 IIIIGGRRQFNYEFIPKTTTSSSSSSSSSIHLSFLQETNDPSE-NNLYPFVHLLPNGNLF 250
           III+GGRR FNYEF PK          S  +L FL ET DP+E NNLYPF+HLLP+GNLF
Sbjct: 183 IIIVGGRRAFNYEFYPK------DPGESVFNLRFLAETRDPNEENNLYPFLHLLPDGNLF 236

Query: 251 IFANTRSILFDYKQNVVVKEFPEIPGGDPHNYPSSGSSVLLPL----DENQISMEATIMI 306
           IFAN RSILFD+  + ++KEFP+IPGGD  NYPS+GSSVLLPL    D N+  + A +M+
Sbjct: 237 IFANRRSILFDFVNHRIIKEFPQIPGGDKRNYPSTGSSVLLPLFLTGDINRTKITAEVMV 296

Query: 307 CGGAPRGSF-EAAKG--KNFMPALKTCGFLKVTDSNPSWIIENMPMARVMGDMLILPNGD 363
           CGGAP G+F +AA+   K F+   +TCG LKVTD +P W++E MP  RVM DML+LPNGD
Sbjct: 297 CGGAPPGAFFKAARTIPKIFVAGSRTCGRLKVTDPDPKWVMEQMPSPRVMSDMLLLPNGD 356

Query: 364 VIIINGAGSGTAGWENGRQPVLTPVIFRSSETKSDKRFSVMSPASRPRLYHSSAIVLRDG 423
           V+IINGA +GTAGWE+    VL P+++   E    +RF +++P   PR+YHS++++L DG
Sbjct: 357 VLIINGAANGTAGWEDATNAVLNPILYLPEEPDQTRRFEILTPTRIPRMYHSASLLLSDG 416

Query: 424 RVLVGGSNPHVNYNFTGVEFPTDLSLEAFSPPYLSLEFDLVRPTIWHVTNKILG---YRV 480
           RVLVGGSNPH NYNFT   +PT+LSLEA+ P YL  ++  VRPTI  +T ++ G   Y  
Sbjct: 417 RVLVGGSNPHRNYNFTARPYPTELSLEAYLPRYLDPQYARVRPTI--ITVELAGNMLYGQ 474

Query: 481 FYYVTFTVAKFAS-ASEVSVRLLAPSFTTHSFGMNQRMVVLKLIGVTMVNLDIYYATVVG 539
            + VTF +  F      VSVRL+APSF+THS  MNQR++VL++  V+ +++  Y A V G
Sbjct: 475 AFAVTFAIPAFGMFDGGVSVRLVAPSFSTHSTAMNQRLLVLRVRRVSQLSVFAYKADVDG 534

Query: 540 PSTQEIAPPGYYLLFLVHAGVPSSGEW 566
           P+   +APPGYY++F+VH G+PS   W
Sbjct: 535 PTNSYVAPPGYYMMFVVHRGIPSVAVW 561


>At1g19900 unknown protein
          Length = 548

 Score =  567 bits (1462), Expect = e-162
 Identities = 285/532 (53%), Positives = 369/532 (68%), Gaps = 18/532 (3%)

Query: 45  SSNQGEWELIQPTIGISAMHMQLSHNNKIIIFDRTDFGPSNLPLSNGRCRMDPFDTALKI 104
           S+ +G W+ I P +GISAMHMQL HN++++++DRT+FGPSN+ L NG CR +P D   KI
Sbjct: 27  SAARGLWKYIAPNVGISAMHMQLLHNDRVVMYDRTNFGPSNISLPNGNCRDNPQDAVSKI 86

Query: 105 DCTAHSVLYDIATNTFRSLTVQTDTWCSSGSVLSNGTLVQTGGFNDGERRIRMFTPCFNE 164
           DCTAHS+ YD+ATNT R LTVQ++TWCSSGSV  +G LVQTGG  DGE + R F+PC N 
Sbjct: 87  DCTAHSIEYDVATNTIRPLTVQSNTWCSSGSVRPDGVLVQTGGDRDGELKTRTFSPCNNN 146

Query: 165 NCDWIEFPSYLSERRWYATNQILPDNRIIIIGGRRQFNYEFIPKTTTSSSSSSSSSIHLS 224
            CDW+E  + L +RRWYA+N ILPD + I++GG+ QFNYEF PKTT      + + + L 
Sbjct: 147 QCDWVEMNNGLKKRRWYASNHILPDGKQIVMGGQGQFNYEFFPKTT------NPNVVALP 200

Query: 225 FLQETNDP-SENNLYPFVHLLPNGNLFIFANTRSILFDYKQNVVVKEFPEIPGGDPHNYP 283
           FL ET+D   ENNLYPFV +  +GNLF+FAN R+IL DY +N VVK FP IPGGDP NYP
Sbjct: 201 FLAETHDQGQENNLYPFVFMNTDGNLFMFANNRAILLDYVKNTVVKTFPAIPGGDPRNYP 260

Query: 284 SSGSSVLLPLDENQI-SMEATIMICGGAPRGSFEAAKGKNFMPALKTCGFLKVTDSNPSW 342
           S+GS+VLLPL   +  ++E  +++CGGAP+GS+  A+ K F+ AL TC  +K+ D+ P W
Sbjct: 261 STGSAVLLPLKNLEADNVETEVLVCGGAPKGSYNLARKKTFVKALDTCARIKINDAKPEW 320

Query: 343 IIENMPMARVMGDMLILPNGDVIIINGAGSGTAGWENGRQPVLTPVIFRSSETKSDKRFS 402
            +E MP ARVMGDM+ LPNGDV++ING   GTA WE GR PVL P ++   E     RF 
Sbjct: 321 AVEKMPHARVMGDMIPLPNGDVLLINGGSFGTAAWELGRTPVLAPDLYH-PENPVGSRFE 379

Query: 403 VMSPASRPRLYHSSAIVLRDGRVLVGGSNPHVNYNFTGVEFPTDLSLEAFSPPYLSLEFD 462
            + P + PR+YHS+AI+LRDGRVLVGGSNPH  YN+TGV FPT+LSLEAFSP YL  EF 
Sbjct: 380 SLRPTTIPRMYHSAAILLRDGRVLVGGSNPHAFYNYTGVLFPTELSLEAFSPVYLQREFS 439

Query: 463 LVRPTIWHVTNKILGYRVFYYVTFTVAKFASASEVS----VRLLAPSFTTHSFGMNQRMV 518
            +RP I     +     +  Y T    KF+   EV+    V ++ P+FTTHSF MNQR++
Sbjct: 440 NLRPKIISPEPQ----SMIKYGTNLKLKFSVTGEVTTPAKVTMVFPTFTTHSFAMNQRVL 495

Query: 519 VLKLIGVTMVNLD-IYYATVVGPSTQEIAPPGYYLLFLVHAGVPSSGEWVQL 569
           VL  +  T      +Y   V  P +  IA PGYY++F+V+  +PS G WV+L
Sbjct: 496 VLDNVKFTRKGKSPMYEVQVRTPRSANIAWPGYYMIFVVNQDIPSEGVWVKL 547


>At1g75620 unknown protein
          Length = 547

 Score =  565 bits (1455), Expect = e-161
 Identities = 283/528 (53%), Positives = 366/528 (68%), Gaps = 15/528 (2%)

Query: 45  SSNQGEWELIQPTIGISAMHMQLSHNNKIIIFDRTDFGPSNLPLSNGRCRMDPFDTALKI 104
           S ++G WEL+ P +GISAMH QL HN+++I++DRT+FGPSN+ L NG CR  P D   K 
Sbjct: 31  SGDEGTWELLLPNVGISAMHSQLLHNDRVIMYDRTNFGPSNISLPNGACRSSPGDAVSKT 90

Query: 105 DCTAHSVLYDIATNTFRSLTVQTDTWCSSGSVLSNGTLVQTGGFNDGERRIRMFTPCFNE 164
           DCTAHSV YD+A N  R LTVQ++TWCSSG V  +GTL+QTGG  DGER++R+  PC + 
Sbjct: 91  DCTAHSVEYDVALNRIRPLTVQSNTWCSSGGVTPDGTLLQTGGDLDGERKVRLMDPCDDN 150

Query: 165 NCDWIEFPSYLSERRWYATNQILPDNRIIIIGGRRQFNYEFIPKTTTSSSSSSSSSIHLS 224
           +CDWIE  + L+ RRWYATN ILPD R IIIGGR QFNYEF PKT   +  S      + 
Sbjct: 151 SCDWIEVDNGLAARRWYATNHILPDGRQIIIGGRGQFNYEFFPKTNAPNFYS------IP 204

Query: 225 FLQETNDP-SENNLYPFVHLLPNGNLFIFANTRSILFDYKQNVVVKEFPEIPGGDPHNYP 283
           FL ETNDP  ENNLYPFV L  +GNLFIFAN R+IL DY  N VV+ +PEIPGGDP +YP
Sbjct: 205 FLSETNDPGDENNLYPFVFLNTDGNLFIFANNRAILLDYSTNTVVRTYPEIPGGDPRSYP 264

Query: 284 SSGSSVLLPLDENQISMEATIMICGGAPRGSFEAAKGKNFMPALKTCGFLKVTDSNPSWI 343
           S+GS+VLLP+     ++   +++CGGAP+GS+  +    F+ AL TC  + + D NP WI
Sbjct: 265 STGSAVLLPIK----NLVLEVLVCGGAPKGSYNLSWRNTFVKALDTCARININDVNPQWI 320

Query: 344 IENMPMARVMGDMLILPNGDVIIINGAGSGTAGWENGRQPVLTPVIFRSSETKSDKRFSV 403
           +E MP ARVMGDM++LP+G+V++ING  SGTA WE GR+PVL P ++   +     RF V
Sbjct: 321 VEKMPRARVMGDMMLLPDGNVLLINGGSSGTAAWELGREPVLHPDLYHPDKPVG-SRFEV 379

Query: 404 MSPASRPRLYHSSAIVLRDGRVLVGGSNPHVNYNFTGVEFPTDLSLEAFSPPYLSLEFDL 463
            +P++ PR+YHS A +LRDGR+LVGGSNPH  YNFTGV FPT+L LEAFSP YL  ++  
Sbjct: 380 QNPSTIPRMYHSIATLLRDGRILVGGSNPHAFYNFTGVLFPTELRLEAFSPSYLDTKYSS 439

Query: 464 VRPTIWHV-TNKILGYRVFYYVTFTVAKFASASEVSVRLLAPSFTTHSFGMNQRMVVL-K 521
           +RP+I        + Y     + F V+     S V V +L PSFTTHSF M+QR++VL  
Sbjct: 440 LRPSIVDPRPQTTVNYGRVLRLRFIVSGRVK-SPVKVTMLFPSFTTHSFSMHQRLLVLDH 498

Query: 522 LIGVTMVNLDIYYATVVGPSTQEIAPPGYYLLFLVHAGVPSSGEWVQL 569
           +I   +    IY   V  PS+  +APPGYY++F+V+  +PS G WV+L
Sbjct: 499 VISFKLGISKIYEVRVRTPSSAILAPPGYYMVFVVNQDIPSEGLWVRL 546


>At3g53950 unknown protein
          Length = 545

 Score =  434 bits (1115), Expect = e-122
 Identities = 232/527 (44%), Positives = 317/527 (60%), Gaps = 21/527 (3%)

Query: 49  GEWELIQPTIGISAMHMQLSHNNKIIIFDRTDFGPSNLPLSNGRCRMDPFDTALKIDCTA 108
           G WELI    GI++MH  ++  N +I+ DRT+ GPS   L   RCR DP D ALK DC A
Sbjct: 34  GSWELIVQDAGIASMHTAVTRFNTVILLDRTNIGPSRKALDRHRCRRDPKDAALKRDCYA 93

Query: 109 HSVLYDIATNTFRSLTVQTDTWCSSGSVLSNGTLVQTGGFNDGERRIRMFTPCF-NENCD 167
           HSVL+D+ TN  R L +QTDTWCSSG  LS+G+L+QTGG  DG ++IR F PC  NE CD
Sbjct: 94  HSVLFDLGTNQIRPLMIQTDTWCSSGQFLSDGSLLQTGGDKDGFKKIRKFEPCDPNETCD 153

Query: 168 WIEF-PSYLSERRWYATNQILPDNRIIIIGGRRQFNYEFIPKTTTSSSSSSSSSIHLSFL 226
           W+E   + L   RWYA+NQILPD  +II+GGR     E+ P          + ++   FL
Sbjct: 154 WVELQDTELITGRWYASNQILPDGSVIIVGGRGTNTVEYYP-------PRENGAVPFQFL 206

Query: 227 QETNDPSENNLYPFVHLLPN---GNLFIFANTRSILFDYKQNVVVKEFPEIPGGDPHNYP 283
            +  D   +NLYP+VHLLP+   GNLFIFAN+R++ +D++ N VVKE+P + GG P NYP
Sbjct: 207 ADVEDKQMDNLYPYVHLLPDDDGGNLFIFANSRAVKYDHRINAVVKEYPPLDGG-PRNYP 265

Query: 284 SSGSSVLLPLDENQISMEATIMICGGAPRGSFEAAKGKNFMPALKTCGFLKVTDSNPSWI 343
           S GSS +L +  +  + E  I+ICGGA  G+F A       PA  TCG +  T ++P W+
Sbjct: 266 SGGSSAMLAIQGDFTTAE--ILICGGAQSGAFTARAID--APAHGTCGRIVATAADPVWV 321

Query: 344 IENMPMARVMGDMLILPNGDVIIINGAGSGTAGWENGRQPVLTPVIFRSSETKSDKRFSV 403
            E MP  R+MGDM+ LP G+++IINGA +G+ G+E G  P L P+++R  +     RF  
Sbjct: 322 TEEMPFGRIMGDMVNLPTGEILIINGAQAGSQGFEMGSDPCLYPLLYRPDQ-PIGLRFMT 380

Query: 404 MSPASRPRLYHSSAIVLRDGRVLVGGSNPHVNYNFTGVEFPTDLSLEAFSPPYLSLEFDL 463
           ++P + PR+YHS+A +L DGR+L+ GSNPH  Y F   EFPT+L +EAFSP YLS +   
Sbjct: 381 LNPGTVPRMYHSTANLLPDGRILLAGSNPHYFYKF-NAEFPTELRIEAFSPEYLSPDRAN 439

Query: 464 VRPTIWHVTNKILGYRVFYYVTFTVAKFASASEVSVRLLAPSFTTHSFGMNQRMVVLKLI 523
           +RP I  +   I    VF    F          + +   +  F THSF   QR+V L + 
Sbjct: 440 LRPEIQEIPQIIRYGEVF--DVFVTVPLPVVGIIQMNWGSAPFATHSFSQGQRLVKLTVA 497

Query: 524 GVTMVNLDIYYATVVGPSTQEIAPPGYYLLFLVHAGVPSSGEWVQLM 570
                 +  Y      P    ++PPGYY+ F V+ GVPS   W++++
Sbjct: 498 PSVPDGVGRYRIQCTAPPNGAVSPPGYYMAFAVNQGVPSIARWIRIV 544


>At5g19580 putative protein
          Length = 594

 Score =  431 bits (1107), Expect = e-121
 Identities = 231/529 (43%), Positives = 320/529 (59%), Gaps = 18/529 (3%)

Query: 49  GEWELIQPTIGISAMHMQLSHN-NKIIIFDRTDFGPSNLPLSNG-RCRMDPFDTALKIDC 106
           G+WEL     G+S MH  L    NK+  +D T +  S + L  G  C +    T  K+DC
Sbjct: 77  GKWELFLENSGVSGMHAILMPVINKVQYYDATIWRISKIKLPPGVPCHVVDAKTN-KVDC 135

Query: 107 TAHSVLYDIATNTFRSLTVQTDTWCSSGSVLSNGTLVQTGGFNDGERRIRMFTPCFNENC 166
            AHS+L D+ T   + L + TDTWCSSG +  NGTLV TGG+  G    R  + C  ENC
Sbjct: 136 WAHSILMDVNTGALKPLGLSTDTWCSSGGLTVNGTLVSTGGYGGGANTARYLSSC--ENC 193

Query: 167 DWIEFPSYLSERRWYATNQILPDNRIIIIGGRRQFNYEFIPKTTTSSSSSSSSSIHLSFL 226
            W E+P  L+ +RWY+T   LPD +  +IGGR   NYE+IP+   ++     S +    L
Sbjct: 194 KWEEYPQALAAKRWYSTQATLPDGKFFVIGGRDALNYEYIPEEGQNNRKLFDSLL----L 249

Query: 227 QETNDPSENNLYPFVHLLPNGNLFIFANTRSILFDYKQNVVVKEFPEIPGGDPHNYPSSG 286
           ++T+DP ENNLYPFV L  +GNLFIFAN RSIL   K N V+KEFP++PGG   NYP SG
Sbjct: 250 RQTDDPEENNLYPFVWLNTDGNLFIFANNRSILLSPKTNQVIKEFPQLPGG-ARNYPGSG 308

Query: 287 SSVLLPLD---ENQISMEATIMICGGAPRGSFEAAKGKNFMPALKTCGFLKVTDSNPSWI 343
           SS LLP+    +N   + A +++CGG+ + ++  A  K + PAL+ C  +++  + P W 
Sbjct: 309 SSALLPIQLYVKNPKVIPAEVLVCGGSKQDAYYKAGKKIYEPALQDCARIRINSAKPRWK 368

Query: 344 IENMPMARVMGDMLILPNGDVIIINGAGSGTAGWENGRQPVLTPVIFRSSETKSDKRFSV 403
            E MP  R+M D +ILPNGD++++NGA  G +GW  G+ P   P++++    +  KRF  
Sbjct: 369 TEMMPTPRIMSDTVILPNGDILLVNGAKRGCSGWGYGKDPAFAPLLYKPHAARG-KRFRQ 427

Query: 404 MSPASRPRLYHSSAIVLRDGRVLVGGSNPHVNYNFTGVEFPTDLSLEAFSPPYLSLEFDL 463
           + P + PR+YHSSAI+L DG+VLVGGSN +  Y +  VEFPT+L +E FSPPYL      
Sbjct: 428 LKPTTIPRMYHSSAIILPDGKVLVGGSNTNDGYKY-NVEFPTELRVEKFSPPYLDPALAN 486

Query: 464 VRPTIWHV-TNKILGYRVFYYVTFTV-AKFASASEVSVRLLAPSFTTHSFGMNQRMVVLK 521
           +RP I    T K + Y  F+ V   +  K A+   + V +LAP+FTTHS  MN RM++L 
Sbjct: 487 IRPKIVTTGTPKQVKYGQFFNVKVDLKEKGATKGNLKVTMLAPAFTTHSISMNMRMLILG 546

Query: 522 LIGVTMVNLDIYYATVVGPSTQEIAPPGYYLLFLVHAGVPSSGEWVQLM 570
           +  V       Y    V P    IAPPGYYL+F ++ GVPS+GEW+Q++
Sbjct: 547 VNNVKPAGAG-YDIQAVAPPNGNIAPPGYYLIFAIYKGVPSTGEWIQVV 594


>At1g67290 unknown protein
          Length = 615

 Score =  427 bits (1098), Expect = e-120
 Identities = 242/542 (44%), Positives = 330/542 (60%), Gaps = 21/542 (3%)

Query: 39  SLLSSPSSN-QGEWELIQPTIGISAMHMQLSHN-NKIIIFDRTDFGPSNLPLSNG-RCRM 95
           ++ + P  N  G+WEL     G+SAMH  L    NK+  +D T +  S + L  G  C +
Sbjct: 85  TVAAGPEMNWPGQWELFMKNSGVSAMHAILMPLINKVQFYDATIWRISQIKLPPGVPCHV 144

Query: 96  DPFDTAL-KIDCTAHSVLYDIATNTFRSLTVQTDTWCSSGSVLSNGTLVQTGGFNDGERR 154
             FD    K+DC AHSVL DI T   + L + TDTWCSSG +  NGTLV TGGF  G   
Sbjct: 145 --FDAKKNKVDCWAHSVLVDINTGDIKPLALTTDTWCSSGGLTVNGTLVSTGGFQGGANT 202

Query: 155 IRMFTPCFNENCDWIEFPSYLSERRWYATNQILPDNRIIIIGGRRQFNYEFIPKTTTSSS 214
            R  + C  ENC WIE+P  L+ RRWY+T   LPD   I++GGR   NYE+I     ++ 
Sbjct: 203 ARYLSTC--ENCVWIEYPKALAARRWYSTQATLPDGTFIVVGGRDALNYEYILPEGQNNK 260

Query: 215 SSSSSSIHLSFLQETNDPSENNLYPFVHLLPNGNLFIFANTRSILFDYKQNVVVKEFPEI 274
               S +    L++T+DP ENNLYPFV L  +GNLFIFAN RSIL   K N V+KEFP++
Sbjct: 261 KLYDSQL----LRQTDDPEENNLYPFVWLNTDGNLFIFANNRSILLSPKTNKVLKEFPQL 316

Query: 275 PGGDPHNYPSSGSSVLLPLD---ENQISMEATIMICGGAPRGS-FEAAKGKNFMPALKTC 330
           PGG   NYP S SS LLP+    +N   + A +++CGGA + + F A + K +  ALK C
Sbjct: 317 PGG-ARNYPGSASSALLPIRLYVQNPAIIPADVLVCGGAKQDAYFRAERLKIYDWALKDC 375

Query: 331 GFLKVTDSNPSWIIENMPMARVMGDMLILPNGDVIIINGAGSGTAGWENGRQPVLTPVIF 390
             L +  + P W  E MP +RVM D +ILPNG+++IINGA  G++GW   ++P   P+++
Sbjct: 376 ARLNINSAKPVWKTETMPTSRVMSDTVILPNGEILIINGAKRGSSGWHLAKEPNFAPLLY 435

Query: 391 RSSETKSDKRFSVMSPASRPRLYHSSAIVLRDGRVLVGGSNPHVNYNFTGVEFPTDLSLE 450
           + ++    +RF  ++P++ PR+YHS AI L DG+VLVGGSN +  Y F  VE+PT+L +E
Sbjct: 436 KPNKPLG-QRFKELAPSTIPRVYHSIAIALPDGKVLVGGSNTNNGYQFN-VEYPTELRIE 493

Query: 451 AFSPPYLSLEFDLVRPTIWHV-TNKILGYRVFYYVTFTVAKFASASE-VSVRLLAPSFTT 508
            FSPPYL      +RP I +  T K + Y   + V   + +   A E V V +LAPSFTT
Sbjct: 494 KFSPPYLDPALANMRPRIVNTATPKQIKYGQMFDVKIELKQQNVAKENVMVTMLAPSFTT 553

Query: 509 HSFGMNQRMVVLKLIGVTMVNLDIYYATVVGPSTQEIAPPGYYLLFLVHAGVPSSGEWVQ 568
           HS  MN R+++L +  V  V  D +    V P + ++APPGYYLLF V+ GVPS GEW+Q
Sbjct: 554 HSVSMNMRLLMLGINNVKNVGGDNHQIQAVAPPSGKLAPPGYYLLFAVYNGVPSVGEWIQ 613

Query: 569 LM 570
           ++
Sbjct: 614 IV 615


>At1g70280 NHL repeat-containing protein
          Length = 509

 Score = 34.7 bits (78), Expect = 0.15
 Identities = 20/80 (25%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 208 KTTTSSSSSSSSSIHLS---FLQETNDPSENNLYPF-VHLLPNGNLFIFANTRSILFDYK 263
           KTTT ++ ++ S +       ++   D S+  + P+ + +LPNG L I  +  S ++   
Sbjct: 51  KTTTKTTIATRSMVKFENGYSVETVFDGSKLGIEPYSIEVLPNGELLILDSENSNIYKIS 110

Query: 264 QNVVVKEFPEIPGGDPHNYP 283
            ++ +   P +  G P  YP
Sbjct: 111 SSLSLYSRPRLVTGSPEGYP 130


>At5g32640 putative protein
          Length = 402

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 29/87 (33%), Positives = 42/87 (47%), Gaps = 12/87 (13%)

Query: 7   ILIFFILSSLIPHFHILIVSSSSS---SPSPSPLPSLLSSPSS-NQGEWELIQPTIGISA 62
           I IFF +S   PH    ++S SS    SPS  PLP+ L  P +  +  + ++ PTI   A
Sbjct: 123 IYIFFDVSHSQPHLSTFLISFSSDKAFSPSQPPLPNRLREPDAILKLFFTMVAPTIATQA 182

Query: 63  MHMQLSHNNKIIIFDRTDFGPSNLPLS 89
           +      N   ++     F  S+LPLS
Sbjct: 183 VEC----NGTCLVV----FTSSSLPLS 201


>At1g23880 unknown protein
          Length = 485

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 19/80 (23%), Positives = 37/80 (45%), Gaps = 4/80 (5%)

Query: 208 KTTTSSSSSSSSSIHLS---FLQETNDPSENNLYPF-VHLLPNGNLFIFANTRSILFDYK 263
           KTTT ++  + S +       ++   D S+  + P+ + +L NG L I  +  S ++   
Sbjct: 53  KTTTKTAVPTKSMVKFENGYSVETVLDGSKLGIEPYSIQVLSNGELLILDSQNSNIYQIS 112

Query: 264 QNVVVKEFPEIPGGDPHNYP 283
            ++ +   P +  G P  YP
Sbjct: 113 SSLSLYSRPRLVTGSPEGYP 132


>At5g41960 unknown protein
          Length = 217

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 18/44 (40%), Positives = 27/44 (60%)

Query: 1  MSSITLILIFFILSSLIPHFHILIVSSSSSSPSPSPLPSLLSSP 44
          M+S++ + I  + SS   +    ++SSSSSSPSP PL   L +P
Sbjct: 1  MASLSCLPICGLSSSASLYTKARLLSSSSSSPSPLPLAYPLQNP 44


>At2g05220 40S ribosomal protein S17
          Length = 179

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 16/31 (51%), Positives = 17/31 (54%)

Query: 10 FFILSSLIPHFHILIVSSSSSSPSPSPLPSL 40
          F   S  + H  I I    SSSPSPSP PSL
Sbjct: 7  FLYFSPPLSHLQIEIALCLSSSPSPSPSPSL 37


>rpoC2 -chloroplast genome- RNA polymerase beta' subunit-2
          Length = 1376

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 29/108 (26%), Positives = 45/108 (40%), Gaps = 15/108 (13%)

Query: 200 QFNYEFIPKTTTSSSSSSSSSIHLS---FLQETNDPSENNLYPFVHLLPNGNL------- 249
           Q N  F+     S SS S ++  +S   F  +  DP +  +Y +  L  NGNL       
Sbjct: 499 QMNIPFLSAERKSISSLSVNNDQVSQKFFSSDFADPKKLGIYDYSEL--NGNLGTSHYNL 556

Query: 250 ---FIFANTRSILFDYKQNVVVKEFPEIPGGDPHNYPSSGSSVLLPLD 294
               IF     +L   ++N  +  F  I   +    P SG SV +P++
Sbjct: 557 IYSAIFHENSDLLAKRRRNRFLIPFQSIQEQEKEFIPQSGISVEIPIN 604


>At5g55020 putative transcription factor MYB120 (MYB120)
          Length = 523

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 7/47 (14%)

Query: 26  SSSSSSPSPSPLPSLLSSPSSNQGEWELIQPTIGISAM-HMQLSHNN 71
           S  SS+P P PL S L SP +NQ       PT+ + A+   Q+++NN
Sbjct: 228 SQLSSTPPPPPLSSPLCSPRNNQ------YPTLPLFALPRSQINNNN 268


>At4g02070 G/T DNA mismatch repair enzyme
          Length = 1324

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 16/24 (66%), Positives = 19/24 (78%), Gaps = 2/24 (8%)

Query: 26 SSSSSSPSPSPLPSLLS--SPSSN 47
          +SSSSSPSPSP PSL +  +P SN
Sbjct: 29 ASSSSSPSPSPSPSLSNKKTPKSN 52


>At3g19120 unknown protein
          Length = 446

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 18/37 (48%), Positives = 22/37 (58%), Gaps = 4/37 (10%)

Query: 8  LIFFILSSLIPHFHI----LIVSSSSSSPSPSPLPSL 40
          L+FF L+SL+    +       SSSS SPSPSP P L
Sbjct: 51 LLFFTLASLLSFLAVNRSSTESSSSSESPSPSPPPPL 87


>At3g02150 unknown protein
          Length = 355

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 1/60 (1%)

Query: 13  LSSLIPHFHILIVSSSSSSPSPSPLPSLL-SSPSSNQGEWELIQPTIGISAMHMQLSHNN 71
           L SL+P    ++V   ++SP+ + + SL  SS S+  G  E + P   +S   M L  N+
Sbjct: 231 LHSLVPFPSQILVCPMTTSPTTTTIQSLFPSSSSAGSGTMETLDPRQMVSHFQMPLMGNS 290


>At5g27820 putative protein
          Length = 114

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)

Query: 451 AFSPPYLSLEFDLVRPTI--WHVTNKILGYRVFYYVTFTVAKFASASEVSVR 500
           A  PP L   FD ++P +   H TNK +  +V +  T TVA  AS+ E ++R
Sbjct: 6   AVRPPRL---FDYLKPYVLKMHFTNKFVHAQVIHSPTATVACSASSQEKALR 54


>At4g29880 putative protein
          Length = 404

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 11/107 (10%)

Query: 19  HFHILIVSSSSSSPSPSPLPSLLS--SPSSNQGEWELIQPTIGISAMHMQLSHNNKIIIF 76
           H   +++   S+SP  SPL   LS  SPS N  E E ++  + +S M +Q   N  + + 
Sbjct: 18  HMMTMMMMDLSTSPPSSPLSPSLSPKSPSYNNNEEERLE-VVNLSGMALQSLPNPSLNLA 76

Query: 77  DRTDFGPSNLPLSNGRCRMDPFDTALKIDCTAHSVLYDIATNTFRSL 123
           +        L LSN   +  P     ++    + +  DI +N  ++L
Sbjct: 77  N-----ICKLDLSNNHIKKIPESLTARL---LNLIALDIHSNQIKAL 115


>At5g26780 glycine hydroxymethyltransferase - like protein
          Length = 533

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 12/36 (33%), Positives = 22/36 (60%), Gaps = 1/36 (2%)

Query: 256 RSILFDYKQNVVVKEFPEIPGGDPHNYPSSGSSVLL 291
           + +++DY+  +    FP + GG PHN+  +G +V L
Sbjct: 310 KEVMYDYEDRINQAVFPGLQGG-PHNHTITGLAVAL 344


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.136    0.412 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,819,421
Number of Sequences: 26719
Number of extensions: 645140
Number of successful extensions: 2584
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2484
Number of HSP's gapped (non-prelim): 42
length of query: 570
length of database: 11,318,596
effective HSP length: 105
effective length of query: 465
effective length of database: 8,513,101
effective search space: 3958591965
effective search space used: 3958591965
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)