BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148342.20 - phase: 0
(129 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g37640 polyubiquitin 4 91 1e-19
At5g20620 polyubiquitin 4 UBQ4 91 2e-19
At5g03240 polyubiquitin (ubq3) 91 2e-19
At4g05320 polyubiquitin (ubq10) 91 2e-19
At4g05050 91 2e-19
At4g02890 polyubiquitin 91 2e-19
At3g62250 ubiquitin extension protein (UBQ5) 90 3e-19
At3g52590 ubiquitin / ribosomal protein CEP52 90 3e-19
At2g47110 putative ubiquitin extension protein (UBQ6) 90 3e-19
At2g36170 putative ubiquitin/ribosomal protein CEP52 90 3e-19
At1g65350 90 3e-19
At1g31340 putative ubiquitin (AtRUB1) 90 3e-19
At1g23410 ubiquitin extension protein, putative 90 3e-19
At1g55060 ubiquitin-like (UBQ12) 89 6e-19
At3g09790 polyubiquitin 88 1e-18
At1g53960 unknown protein 69 9e-13
At1g53930 hypothetical protein 65 9e-12
At1g11980 unknown protein 53 5e-08
At1g53950 hypothetical protein 52 1e-07
At5g42220 unknown protein 50 2e-07
>At5g37640 polyubiquitin 4
Length = 322
Score = 91.3 bits (225), Expect = 1e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +G+P QRLIFA QLD RTLADYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 139 IQKESTLHLVLRLRG 153
Score = 82.8 bits (203), Expect = 4e-17
Identities = 48/92 (52%), Positives = 59/92 (63%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFV+ L KT L+V+SS VK I + +GIP QRL
Sbjct: 138 NIQKESTLHLVLRLRGGMQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRL 197
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 198 IFAGKQLEDGRTLADYNIQKESTLHLVLRLCG 229
Score = 79.0 bits (193), Expect = 6e-16
Identities = 50/93 (53%), Positives = 59/93 (62%), Gaps = 1/93 (1%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFV L GKT TL+V+SS I VK I + + I QRL
Sbjct: 214 NIQKESTLHLVLRLCGGMQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRL 273
Query: 97 IFARMQL-DGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL DG TLADYN+ KESTLHLVLRL G
Sbjct: 274 IFAGEQLEDGYYTLADYNIQKESTLHLVLRLRG 306
Score = 70.9 bits (172), Expect = 2e-13
Identities = 40/77 (51%), Positives = 49/77 (62%)
Query: 52 VQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLAD 111
+ MQI K L KT T+ V SS I VK I + +GIP+ QRLIF+ LD RTLAD
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 112 YNVTKESTLHLVLRLLG 128
Y++ K+S LHL LRL G
Sbjct: 61 YSIQKDSILHLALRLRG 77
>At5g20620 polyubiquitin 4 UBQ4
Length = 382
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At5g03240 polyubiquitin (ubq3)
Length = 306
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At4g05320 polyubiquitin (ubq10)
Length = 464
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 212 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 271
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 272 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 303
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 288 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 347
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 348 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 379
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 34.7 bits (78), Expect = 0.014
Identities = 22/51 (43%), Positives = 30/51 (58%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFEND 87
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +
Sbjct: 364 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
>At4g05050
Length = 229
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At4g02890 polyubiquitin
Length = 229
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 151
Score = 90.5 bits (223), Expect = 2e-19
Identities = 52/92 (56%), Positives = 62/92 (66%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At3g62250 ubiquitin extension protein (UBQ5)
Length = 157
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At3g52590 ubiquitin / ribosomal protein CEP52
Length = 128
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At2g47110 putative ubiquitin extension protein (UBQ6)
Length = 157
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At2g36170 putative ubiquitin/ribosomal protein CEP52
Length = 128
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At1g65350
Length = 294
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 87.4 bits (215), Expect = 2e-18
Identities = 51/92 (55%), Positives = 61/92 (65%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + + IP QRL
Sbjct: 135 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRL 194
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 195 IFAGKQLEDGRTLADYNIQKESTLHLVLRLRG 226
Score = 83.2 bits (204), Expect = 3e-17
Identities = 51/92 (55%), Positives = 61/92 (65%), Gaps = 1/92 (1%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 60 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRL 119
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA QL+ RTLAD N+ KESTLHLVLRL G
Sbjct: 120 IFAGKQLEDGRTLAD-NIQKESTLHLVLRLRG 150
Score = 56.6 bits (135), Expect = 3e-09
Identities = 34/69 (49%), Positives = 43/69 (62%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GIP QRL
Sbjct: 211 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRL 270
Query: 97 IFARMQLDG 105
IFA QL+G
Sbjct: 271 IFAGKQLEG 279
>At1g31340 putative ubiquitin (AtRUB1)
Length = 156
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
Score = 58.9 bits (141), Expect = 7e-10
Identities = 32/73 (43%), Positives = 44/73 (59%)
Query: 56 IFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYNVT 115
I VK L GK + ++ + I ++KE + E +GIP QRLI+A QL ++T DYN+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 116 KESTLHLVLRLLG 128
S LHLVL L G
Sbjct: 139 GGSVLHLVLALRG 151
>At1g23410 ubiquitin extension protein, putative
Length = 156
Score = 90.1 bits (222), Expect = 3e-19
Identities = 49/75 (65%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I VK I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 61 IQKESTLHLVLRLRG 75
>At1g55060 ubiquitin-like (UBQ12)
Length = 230
Score = 89.0 bits (219), Expect = 6e-19
Identities = 48/75 (64%), Positives = 55/75 (73%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIFVK L GKT TL+V+SS I +K I + +GIP QRLIFA QL+ RTLADYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 137 IQKESTLHLVLRLRG 151
Score = 84.7 bits (208), Expect = 1e-17
Identities = 50/92 (54%), Positives = 60/92 (64%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRL 96
NI + ++L + MQIFVK L GKT TL+V+SS I VK I + +GI QRL
Sbjct: 136 NIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRL 195
Query: 97 IFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
IFA Q + RTLADYN+ KESTLHLVLRL G
Sbjct: 196 IFAGKQHEDGRTLADYNIQKESTLHLVLRLRG 227
Score = 82.0 bits (201), Expect = 7e-17
Identities = 44/75 (58%), Positives = 53/75 (70%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIF+K L GKTK L+V+SS I VK I + +GIP RLIFA QL+ RTLADYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 114 VTKESTLHLVLRLLG 128
V ++STLHL+LR G
Sbjct: 61 VQEDSTLHLLLRFRG 75
>At3g09790 polyubiquitin
Length = 631
Score = 88.2 bits (217), Expect = 1e-18
Identities = 52/98 (53%), Positives = 64/98 (65%)
Query: 31 LLINSLNISLKFCCIVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIP 90
L + NI + ++L + MQIFV+ L GKT TL+VKSS I VK I + +GI
Sbjct: 56 LTLADYNIQKESTLHLVLRLRGGMQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGIL 115
Query: 91 VQDQRLIFARMQLDGNRTLADYNVTKESTLHLVLRLLG 128
+ QRLIFA QL+ RTLADYN+ KESTLHLVLRL G
Sbjct: 116 PRQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLCG 153
Score = 78.2 bits (191), Expect = 1e-15
Identities = 43/75 (57%), Positives = 51/75 (67%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
+QI+ K L KT TL V++S I VK I +GIP+ QRLIFA QL+ TLADYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 114 VTKESTLHLVLRLLG 128
+ KESTLHLVLRL G
Sbjct: 63 IQKESTLHLVLRLRG 77
Score = 68.6 bits (166), Expect = 9e-13
Identities = 39/73 (53%), Positives = 48/73 (65%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
MQIF+K L GKT L+V+SS I VKE I +GI Q LIF QL+ TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 114 VTKESTLHLVLRL 126
+ K+STL+LVLRL
Sbjct: 612 IHKKSTLYLVLRL 624
Score = 64.3 bits (155), Expect = 2e-11
Identities = 38/79 (48%), Positives = 45/79 (56%)
Query: 48 LAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNR 107
L +V+ MQIFVK GK TL+V SS I VK I + G P Q L+F QL R
Sbjct: 387 LHLVLGMQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGR 446
Query: 108 TLADYNVTKESTLHLVLRL 126
TL DYN+ ESTLHL +
Sbjct: 447 TLGDYNIRNESTLHLFFHI 465
Score = 63.2 bits (152), Expect = 4e-11
Identities = 44/100 (44%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 37 NISLKFCCIVLLAIVVQMQIFVKGLDGK-----TKTLKVKSSYRIPKVKEMIFENDGIPV 91
NI + ++L + MQIFV GK T TLKV+SS I VK I + +G+
Sbjct: 138 NIQKESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRP 197
Query: 92 QDQRLIFARMQL--DGNRTLADYNVTKESTLHLVLRLLGD 129
QRLIF +L + NRTLADY + STL L LRL GD
Sbjct: 198 DHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGD 237
Score = 61.2 bits (147), Expect = 1e-10
Identities = 38/73 (52%), Positives = 46/73 (62%), Gaps = 2/73 (2%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQD--QRLIFARMQLDGNRTLAD 111
MQIFVK L K L+V+S I VK M+ + +GI Q QRLIF +L TLAD
Sbjct: 319 MQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCTLAD 378
Query: 112 YNVTKESTLHLVL 124
Y++ KESTLHLVL
Sbjct: 379 YSIQKESTLHLVL 391
Score = 58.2 bits (139), Expect = 1e-09
Identities = 36/77 (46%), Positives = 46/77 (58%), Gaps = 5/77 (6%)
Query: 54 MQIFVKGLD-----GKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRT 108
M IFVK L G+ L+V+SS I VK + + + IP+ RLIFA L+G RT
Sbjct: 238 MYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRT 297
Query: 109 LADYNVTKESTLHLVLR 125
LA YN+ K STL+LV R
Sbjct: 298 LAHYNIQKGSTLYLVTR 314
Score = 57.8 bits (138), Expect = 2e-09
Identities = 37/75 (49%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 54 MQIFVKGLDG-------KTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGN 106
MQIFVK KT TL+V+SS I VK I GIP+ QRLIF L G+
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 107 RTLADYNVTKESTLH 121
RTL DYN+ K ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
>At1g53960 unknown protein
Length = 144
Score = 68.6 bits (166), Expect = 9e-13
Identities = 34/75 (45%), Positives = 48/75 (63%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
M IF+K L G+T T +VK S I ++K E +GIPV+ QRLIF L+ ++ ++DYN
Sbjct: 69 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGRVLEDSKAISDYN 128
Query: 114 VTKESTLHLVLRLLG 128
+ ESTLH+ L G
Sbjct: 129 IKHESTLHITLHQCG 143
>At1g53930 hypothetical protein
Length = 158
Score = 65.1 bits (157), Expect = 9e-12
Identities = 34/73 (46%), Positives = 45/73 (61%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
M IF+K L G+ L+V++ I +K I + GIPV QRLIF QL+ TLADYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 114 VTKESTLHLVLRL 126
+ +S LHL+ RL
Sbjct: 146 IQNDSILHLIKRL 158
>At1g11980 unknown protein
Length = 78
Score = 52.8 bits (125), Expect = 5e-08
Identities = 29/75 (38%), Positives = 44/75 (58%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
M+I VK L K ++++ + I ++KE I E +GIP QR+++ QL + T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 114 VTKESTLHLVLRLLG 128
+ + S LHLVL L G
Sbjct: 61 LERGSVLHLVLALRG 75
>At1g53950 hypothetical protein
Length = 121
Score = 51.6 bits (122), Expect = 1e-07
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 45 IVLLAIVVQMQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLD 104
++ L V M+IFV + KT L+VK S I K+K MI + G PV Q L +L
Sbjct: 37 VLRLGPAVLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLK 96
Query: 105 GNRTLADYNVTKESTL 120
N T++DYN+ ++ L
Sbjct: 97 NNATISDYNIKPDANL 112
>At5g42220 unknown protein
Length = 879
Score = 50.4 bits (119), Expect = 2e-07
Identities = 25/72 (34%), Positives = 41/72 (56%)
Query: 54 MQIFVKGLDGKTKTLKVKSSYRIPKVKEMIFENDGIPVQDQRLIFARMQLDGNRTLADYN 113
+++ +K LD +T T +V + + KE I G+PV QRLIF L + L++Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 114 VTKESTLHLVLR 125
+ TLHL++R
Sbjct: 84 LENGHTLHLIVR 95
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.330 0.145 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,301,762
Number of Sequences: 26719
Number of extensions: 79556
Number of successful extensions: 359
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 275
Number of HSP's gapped (non-prelim): 89
length of query: 129
length of database: 11,318,596
effective HSP length: 88
effective length of query: 41
effective length of database: 8,967,324
effective search space: 367660284
effective search space used: 367660284
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 54 (25.4 bits)
Medicago: description of AC148342.20