BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148291.6 - phase: 0
(1161 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g37060 Athila retroelment ORF 1, putative 598 e-171
At4g07660 putative athila transposon protein 541 e-154
At2g06320 putative retroelement pol polyprotein 525 e-149
At2g14040 putative retroelement pol polyprotein 467 e-131
At2g13060 pseudogene 446 e-125
At2g12040 T10J7.2 306 4e-83
At2g07410 putative retroelement pol polyprotein 269 8e-72
At4g07610 229 7e-60
At4g07600 224 3e-58
At4g07590 217 4e-56
At2g15410 putative retroelement pol polyprotein 206 8e-53
At1g20390 hypothetical protein 203 4e-52
At4g07640 putative athila transposon protein 203 5e-52
At2g11680 putative retroelement pol polyprotein 177 2e-44
At1g35370 hypothetical protein 163 5e-40
At2g15100 putative retroelement pol polyprotein 154 4e-37
At1g37200 hypothetical protein 148 2e-35
At4g07370 147 5e-35
At2g10620 putative Athila retroelement ORF1 protein 144 2e-34
At2g10690 putative retroelement pol polyprotein 142 1e-33
>At1g37060 Athila retroelment ORF 1, putative
Length = 1734
Score = 598 bits (1542), Expect = e-171
Identities = 291/531 (54%), Positives = 377/531 (70%), Gaps = 39/531 (7%)
Query: 620 LNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHAALKYLLTKGDSKPRLLRWI 679
+++ QV YATTEKELLAV+FA EKFRSYL+GSKV ++TDHAAL+++ K D+KPRLLRWI
Sbjct: 1219 MDDAQVRYATTEKELLAVVFAFEKFRSYLVGSKVTIYTDHAALRHIYAKKDTKPRLLRWI 1278
Query: 680 LLLQEFDLEIRDKKGVENVVADHLSRLDNKEVTKKKGAIMAEFPDEKLFAIGER-----P 734
LLLQEFD+EI DKKG+EN VADHLSR+ ++ I P+E+L AI + P
Sbjct: 1279 LLLQEFDMEIVDKKGIENGVADHLSRMRIEDEV----LIDDSMPEEQLMAIQQLNEKKLP 1334
Query: 735 WFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAGEEAHS 794
W+AD N+ P + +++KKFFKD NH+ WD+PYL+ + D + R CV+ +E
Sbjct: 1335 WYADHVNYLVSGEEPPNLSSYEKKKFFKDINHFYWDEPYLYTLCKDKIYRTCVSEDEIEG 1394
Query: 795 IMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISKRNEMP 854
I+ HCH AYGGH + +T +K+LQ+GFWWP++FKD +F+++CD
Sbjct: 1395 ILLHCHGFAYGGHFATFKTMSKILQAGFWWPSMFKDAQEFISKCDS-------------- 1440
Query: 855 LTGIIEVEPFDCWGIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCVANDAKTVVSFLQK 914
E FD WGIDFMGPFPSSY +ILV +DYV+KWVEAI NDA+ V+ +
Sbjct: 1441 ------FENFDVWGIDFMGPFPSSYGNKYILVAIDYVSKWVEAIASHTNDARVVLKLFKT 1494
Query: 915 NIFTRFGTPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQTSAQVEVSNRQLKQI 974
IF RFG PR++ISDGGKHF N EN+LKK+ ++HK TS QVE+SNR++K I
Sbjct: 1495 IIFPRFGVPRIVISDGGKHFINKGFENLLKKHGVKHK--------TSGQVEISNREIKAI 1546
Query: 975 LEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACHLPVELEHKAYWAIKA 1034
LEKT+ S RKDWS KL+D LWAYRTAFKT +G +P+ L+YGK+CHLPVELE+KA WA+K
Sbjct: 1547 LEKTVGSTRKDWSAKLNDTLWAYRTAFKTPIGTTPFNLLYGKSCHLPVELEYKAMWAVKL 1606
Query: 1035 LNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQLVLLYN 1094
LNFD A +KRL++LN+L ++RL AYE++ IYK RTK +HDK +VSRD G VLL+N
Sbjct: 1607 LNFDIKTAEEKRLIQLNDLNKIRLEAYESSKIYKERTKSFHDKKIVSRDFKVGDQVLLFN 1666
Query: 1095 SRLKLFPGKLKSKWSGPFLVKSVLPHGAVELMTPEGDRSFKVNGQRVKPYL 1145
SRL+LFPGKLKS+WSGPF V +V P+GA+ L GD F VNGQR+K Y+
Sbjct: 1667 SRLRLFPGKLKSRWSGPFSVTAVRPYGAITLAGKNGD--FTVNGQRLKKYM 1715
Score = 492 bits (1267), Expect = e-139
Identities = 268/571 (46%), Positives = 365/571 (62%), Gaps = 10/571 (1%)
Query: 38 IPSYVKLPYPHLAKKKKKEEGQFKKFMQL-FSQLQVNIPFGEALDQMPVYAKFMKEMLTG 96
IP K P P + KK ++K ++ L+V +P + L +P K++K+M+T
Sbjct: 509 IPPPYKPPLPFPGRFKKVMIQKYKALLEKQLKNLEVTMPLVDCLALIPDSNKYVKDMITE 568
Query: 97 RRKPKDDENISLSENCSAILQRKL-PPKLKDPGAFTIPCSIGPIDIGRALCDLGASINLM 155
R K + LS CSAI+Q+K+ P KL DPG+FT+PC++GP+ + LCDLGAS++LM
Sbjct: 569 RIKEVQGM-VVLSHECSAIIQQKIIPKKLGDPGSFTLPCALGPLAFSKCLCDLGASVSLM 627
Query: 156 PLSMMKKIGGGEPKPTRMTLTLADRSISYPFGVLEDVLVKVNDLIFPGDFVILDMAEDED 215
PL + KK+G + KP ++L LADRS+ G+LED+ V + + P DFV+L+M E+
Sbjct: 628 PLPVAKKLGFNKYKPCNISLILADRSVRISHGLLEDLPVMIGVVEVPTDFVVLEMDEEPK 687
Query: 216 MPLILGRPFLATGRALIDVEMGQLMLRFHNE-QVVLNIFEAMKHRAENPKCYRIDVIDEI 274
PLILGRPFLA RA+IDV+ G++ L + ++ +I MK + I+ +D +
Sbjct: 688 DPLILGRPFLARARAIIDVKKGKIDLNLGRDLKMTFDITNTMKKPTIEGNIFWIEEMDML 747
Query: 275 VEDDSRAPQPTQPLERTIVNSLESCDLDEDLEVKECIKQLEASKQELGPVKIEEILGEIS 334
+ T L+ + + DL + E I ++ V L S
Sbjct: 748 ADKMLEELGETDHLQSALTKDSKEGDLHLETLGGEYILD-HITRPTAHSVYSTTSLDHNS 806
Query: 335 KGPQ---SSRKEEEKNP--ELKELPSNLKYVFLSKDTSKPAIISSTLTLLEEEKLMRVLR 389
S E K P +LK LP L+YVFL +++ P I++ LT + L+ L
Sbjct: 807 SSEANLVSDDWSEIKAPKVDLKPLPKGLRYVFLGLNSTYPVIVNDELTADQVNLLITELM 866
Query: 390 ENQGALGWKISDLKGISPAYCMHRIHMEAEYKPVVQPQRRLNPTMKEVVKKEVLKLLNAG 449
+ + A+G+ + D+KGISP C HRIH+E E ++PQRRLNP +KEVVKKE+LKLL+AG
Sbjct: 867 KYRKAIGYSLDDIKGISPTLCTHRIHLENESYSSIEPQRRLNPNLKEVVKKEILKLLDAG 926
Query: 450 MIYPISDSSWVSPVHVVPKKGGMTVVANDKNELIPTRTVTGWRMCIDYRRLNSATRKDHF 509
+IYPISDS+WVSPVH VPKKGGMTVV N K+ELIPTRT+TG RMCI+YR+LN A+RK+HF
Sbjct: 927 VIYPISDSTWVSPVHCVPKKGGMTVVKNSKDELIPTRTITGHRMCIEYRKLNVASRKEHF 986
Query: 510 PLPFMDQMIERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTAFTCPFGVFAYRRMPFGLCG 569
PLPF+D M+ERLA +YCFLD YS + QI + P DQ KT FTCP+G FAY+RMPFGLC
Sbjct: 987 PLPFIDHMLERLANHPYYCFLDSYSGFFQIPIHPNDQGKTTFTCPYGTFAYKRMPFGLCN 1046
Query: 570 APATFQRCMLSIFSDMIEKNIEVFMDDFSAF 600
APATFQRCM SIFSD+IE+ +EVFMDDFS +
Sbjct: 1047 APATFQRCMTSIFSDLIEEMVEVFMDDFSVY 1077
>At4g07660 putative athila transposon protein
Length = 724
Score = 541 bits (1394), Expect = e-154
Identities = 317/714 (44%), Positives = 434/714 (60%), Gaps = 102/714 (14%)
Query: 114 AILQRKL-PPKLKDPGAFTIPCSIGPIDIGRALCDLGASINLMPLSMMKKIGGGEPKPTR 172
AI Q+K+ P KL DPG+FT+PCS+GP+ R LCDLGA ++LMPLS+ K++G + K
Sbjct: 3 AITQKKIVPKKLIDPGSFTLPCSLGPLAFKRCLCDLGALVSLMPLSVAKRLGFTQYKSCN 62
Query: 173 MTLTLADRSISYPFGVLEDVLVKVNDLIFPGDFVILDMAEDEDMPLILGRPFLATGRALI 232
++L LADRS+ P + E++ +++ + P DFV+L+M E+ PLILGRPFLAT A+
Sbjct: 63 ISLILADRSVRIPHSLFENLPIRIGAVDIPTDFVVLEMDEEPKDPLILGRPFLATAGAMN 122
Query: 233 DVEMGQLMLRFHNE-QVVLNIFEAMKHRAENPKCYRIDVIDEIVED--DSRAPQP----- 284
DV+ G++ L ++ ++ +AMK + + I+ ID++ ++ + RA +
Sbjct: 123 DVKKGKIDLNLGKYCRMTFDVKDAMKKPTIKGQLFWIEEIDQLADELLEERAEEDHLYSA 182
Query: 285 -TQPLERTIVNSLESCDLDEDLEVKECIKQLEASKQELGPVKIEEILGE----------- 332
T+ E ++ LE+ + L+ + +++ E ++ GP ++ E
Sbjct: 183 LTKRGEDGFLH-LETLGYQKLLDSHKAMEESEPFEELNGPETEVMVMSEEGSTQVQPAHS 241
Query: 333 -----------ISKG-----PQSSRKEEEKNP--ELKELPSNLKYVFLSKDTSKPAIISS 374
IS P S E K P +LK LP L+YVF +++ P II+
Sbjct: 242 RTYSTNNSTSTISNSGELIIPTSDDWSELKAPKVDLKSLPKGLRYVFFGPNSTYPVIINV 301
Query: 375 TLTLLEEEKLMRVLRENQGALGWKISDLKGISPAYCMHRIHMEAEYKPVVQPQRRLNPTM 434
L E L+ LR+ + A+G+ +SD+K ISP+ C HRIH+E E ++PQRRLN +
Sbjct: 302 ELNDNEVNLLLSELRKYKRAIGYSLSDIKRISPSLCNHRIHLENESYSSIEPQRRLNLNL 361
Query: 435 KEVVKKEVLKLLNAGMIYPISDSSWVSPVHVVPKKGGMTVVANDKNELIPTRTVTGWRMC 494
KEVVKKE+LKLL+AG+IYPISDS+WV PVH VPKKGGMTVV N+K+ELIPTRT+TG R+C
Sbjct: 362 KEVVKKEILKLLDAGVIYPISDSTWVFPVHCVPKKGGMTVVKNEKDELIPTRTITGHRVC 421
Query: 495 IDYRRLNSATRKDHFPLPFMDQMIERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTAFTCP 554
IDYR+LN+A+RKDHFPLPF +QM+E LA + CFLDGYS + QI + P DQEKT FTCP
Sbjct: 422 IDYRKLNAASRKDHFPLPFTNQMLEGLANHLYNCFLDGYSGFFQIPIHPNDQEKTTFTCP 481
Query: 555 FGVFAYRRMPFGLCGAPATFQRCMLSIFSDMIEKNIE-------VFMDDFSA-------- 599
+G FAY+RMPFGLC AP TFQRCM SIFSD+IEK +E V+ FS+
Sbjct: 482 YGTFAYKRMPFGLCNAPTTFQRCMTSIFSDLIEKMVEVFMDDFSVYGPSFSSCLLNLGRV 541
Query: 600 -----------------------FVLGQRKN--------------------KFFHAIYYA 616
VLG + + K IYYA
Sbjct: 542 LTKWEETNLVLNWEKCYFMVKEGIVLGHKISEKGIEVDKEKIKVMMQLQPPKTVKDIYYA 601
Query: 617 SKVLNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHAALKYLLTKGDSKPRLL 676
S+ L+E Q YATTEKELL V+FA +KFRSYL+ SKV V+TDHAAL+++ K D+KPRLL
Sbjct: 602 SRTLDEAQGRYATTEKELLVVVFAFKKFRSYLVESKVTVYTDHAALRHMYAKKDTKPRLL 661
Query: 677 RWILLLQEFDLEIRDKKGVENVVADHLSRLDNKEVTKKKGAIMAEFPDEKLFAI 730
R ILLLQEFD+EI +KKG+EN ADHLSR+ +E I P+E+L +
Sbjct: 662 RGILLLQEFDMEIVEKKGIENGAADHLSRMRIEEPI----LIDDSMPEEQLMVV 711
>At2g06320 putative retroelement pol polyprotein
Length = 466
Score = 525 bits (1353), Expect = e-149
Identities = 245/431 (56%), Positives = 317/431 (72%), Gaps = 2/431 (0%)
Query: 731 GERPWFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAGE 790
G PW+AD N+ A I P + ++RK FF+D +HY WD+PYL+ + D + R V+ +
Sbjct: 35 GGSPWYADHVNYLACGIEPPNLTSYERKNFFRDIHHYYWDEPYLYTLCKDKIYRSYVSED 94
Query: 791 EAHSIMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISKR 850
E I+ HCH SAYGGH + +T +K+LQ+GFWWPT+FKD +FV++CD CQR G+IS+R
Sbjct: 95 EVEGILLHCHDSAYGGHFATFKTVSKILQAGFWWPTMFKDAQEFVSKCDSCQRKGNISRR 154
Query: 851 NEMPLTGIIEVEPFDCWGIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCVANDAKTVVS 910
NEMP I+EV+ FD WGIDFMGPFPSSY +ILV VDYV+KWVEAI NDAK V+
Sbjct: 155 NEMPQNPILEVDIFDVWGIDFMGPFPSSYGNKYILVVVDYVSKWVEAIASPTNDAKVVLK 214
Query: 911 FLQKNIFTRFGTPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQTSAQVEVSNRQ 970
+ IF RFG V+ISDGGKHF N + EN+LKK+ ++HKVATPYHPQTS QVE+SNR+
Sbjct: 215 LFKTIIFPRFGVSWVVISDGGKHFINKVFENLLKKHGVKHKVATPYHPQTSGQVEISNRE 274
Query: 971 LKQILEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACHLPVELEHKAYW 1030
+K ILEKT+ RKDWS KLDDALWAY+TAFKT +G +P+ L+ K+CHL VELE+KA W
Sbjct: 275 IKTILEKTVGITRKDWSTKLDDALWAYKTAFKTPIGTTPFNLLCVKSCHLHVELEYKAMW 334
Query: 1031 AIKALNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQLV 1090
A+K LNFD A +KRL++L+EL+E+RL AYE++ IYK RTK +HDK ++++D G V
Sbjct: 335 AVKLLNFDIKTAEEKRLIQLSELDEIRLEAYESSKIYKERTKLFHDKKIITKDFQVGDQV 394
Query: 1091 LLYNSRLKLFPGKLKSKWSGPFLVKSVLPHGAVELMTPEGDRSFKVNGQRVKPYLGGDLP 1150
LL+NSRLK+FPGKLKS+WSGPF + V P+GAV L G F VNGQR+K YL +
Sbjct: 395 LLFNSRLKIFPGKLKSRWSGPFCITEVRPYGAVTLAGKSG--VFTVNGQRLKKYLANQIL 452
Query: 1151 KERVGLVLKDL 1161
E + L++L
Sbjct: 453 PEVTSIHLQEL 463
>At2g14040 putative retroelement pol polyprotein
Length = 841
Score = 467 bits (1201), Expect = e-131
Identities = 264/587 (44%), Positives = 356/587 (59%), Gaps = 51/587 (8%)
Query: 23 KSKSQILKDGDKPQIIPSYV-KLPYPHLAKKKKKEEGQFKKFMQLFSQLQVNIPFGEALD 81
K + Q L++ K ++P YV KLP+P +K ++E+ ++ F ++ QLQ
Sbjct: 2 KLRKQTLEEKAKKTVLPPYVPKLPFPGRQRKIQREK-EYSLFDEIMRQLQ---------- 50
Query: 82 QMPVYAKFMKEMLTGRRKPKDDENISLSENCSAILQRKLPPKLKDPGAFTIPCSIGPIDI 141
S CSAILQ +P K +DPG+F +P IG
Sbjct: 51 -------------------------RYSPECSAILQNVIPVKREDPGSFVLPSRIGEYTF 85
Query: 142 GRALCDLGASINLMPLSMMKKIGGGEPKPTRMTLTLADRSISYPFGVLEDVLVKVNDLIF 201
R LCDLGA ++LMP S+ K++G PT+M+L L DRSIS+P GV EDV V+V +
Sbjct: 86 DRCLCDLGAGVSLMPFSVAKRLGDTNFTPTKMSLVLGDRSISFPVGVAEDVQVRVGNFYI 145
Query: 202 PGDFVILDMAEDEDMPLILGRPFLATGRALIDVEMGQLMLRFHNEQVVLNIFEAMKHRAE 261
P DFVI+++ E+ LILGRPFL ALIDV ++ LR + N+ M
Sbjct: 146 PTDFVIIELDEEPRHRLILGRPFLNIVAALIDVRKSKINLRIGDIVQEFNMERIMSKPTT 205
Query: 262 NPKCYRIDVIDEIVEDDSRAPQPTQPLERTIVNSLESCDLDEDLEVKECIKQLEASKQ-- 319
+ + +D++DE+V + PL+ T++ ES + L++S
Sbjct: 206 ECQTFWVDIMDELVNELLAELNTEDPLQ-TVLTKEESEFGYLGEATTRFARILDSSSPMT 264
Query: 320 ------ELGPVKIEEILGEISKGPQSSRKEEEKNP---ELKELPSNLKYVFLSKDTSKPA 370
ELG ++E+ L + P+ E N ELK LP+ L+ FL +++
Sbjct: 265 KVVAFAELGDNEVEKAL--VVSSPKDCDDWSELNAPKMELKPLPARLRVAFLGPNSTYLV 322
Query: 371 IISSTLTLLEEEKLMRVLRENQGALGWKISDLKGISPAYCMHRIHMEAEYKPVVQPQRRL 430
II+ L +E L+ LR+ + ALG+ + D+ GISP CMH IH+E E V+ QRRL
Sbjct: 323 IINPELNNVESALLLCELRKYRKALGYSLDDITGISPTLCMHMIHLEGESITSVEHQRRL 382
Query: 431 NPTMKEVVKKEVLKLLNAGMIYPISDSSWVSPVHVVPKKGGMTVVANDKNELIPTRTVTG 490
N +++VVKKE++KLL+AG+IYPISDS+WVSPVHVVPKKGG+ V+ N+KNELIPTRTVTG
Sbjct: 383 NSNLRDVVKKEIMKLLDAGIIYPISDSTWVSPVHVVPKKGGVIVIKNEKNELIPTRTVTG 442
Query: 491 WRMCIDYRRLNSATRKDHFPLPFMDQMIERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTA 550
RMCIDYR+LNSATRKD+FPL F+DQM+ERL+ Q +YCFLDGY + QI + P+DQEKT
Sbjct: 443 HRMCIDYRKLNSATRKDNFPLSFIDQMLERLSNQPYYCFLDGYLGFFQILIHPDDQEKTT 502
Query: 551 FTCPFGVFAYRRMPFGLCGAPATFQRCMLSIFSDMIEKNIEVFMDDF 597
FTCP+G FAYRRMPFGLC APATFQ CM IFSDMIE +EVF+DDF
Sbjct: 503 FTCPYGTFAYRRMPFGLCNAPATFQHCMKYIFSDMIEDFMEVFIDDF 549
Score = 121 bits (304), Expect = 2e-27
Identities = 76/184 (41%), Positives = 100/184 (54%), Gaps = 49/184 (26%)
Query: 601 VLGQRKNKFFHAIYYASKVLNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHA 660
VLGQRK+K HAIYYAS+ L+ G++VIV T HA
Sbjct: 675 VLGQRKDKKLHAIYYASRTLD----------------------------GAQVIVHTVHA 706
Query: 661 ALKYLLTKGDSKPRLLRWILLLQEFDLEIRDKKGVENVVADHLSRLDNKEVTKKK----G 716
AL+YLL+K D+KPRLLRWILLLQ+FDLEI+DKKG+EN VAD+LSRL +E + G
Sbjct: 707 ALRYLLSKKDAKPRLLRWILLLQDFDLEIKDKKGIENEVADNLSRLRVQEEVLMRDILPG 766
Query: 717 AIMAEFPDEKLFAIG-----------------ERPWFADMANFKAGNIVPDDFEYHQRKK 759
+A D + +G PW+AD AN+ + + P DF + +KK
Sbjct: 767 ENLASIEDCYMDEVGRLRVSTLELMTLHTGESNLPWYADFANYLSCEVPPPDFTGYFKKK 826
Query: 760 FFKD 763
K+
Sbjct: 827 LLKE 830
>At2g13060 pseudogene
Length = 930
Score = 446 bits (1148), Expect = e-125
Identities = 202/360 (56%), Positives = 268/360 (74%), Gaps = 6/360 (1%)
Query: 734 PWFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAGEEAH 793
PW+AD+ N+ A ++ PD+F + +K+F ++ Y WD+PYL+K S DG+ RRC+A E
Sbjct: 137 PWYADIVNYLAADVEPDNFTDYNKKRFLREIRRYQWDEPYLYKHSYDGIYRRCIAATEVP 196
Query: 794 SIMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISKRNEM 853
SI+ HCHSS+YGGH + +T +KVLQ+ FWWPT+F+D F+++CD CQR G ISKRNEM
Sbjct: 197 SILSHCHSSSYGGHFATFKTVSKVLQADFWWPTMFRDTQKFISQCDPCQRRGKISKRNEM 256
Query: 854 PLTGIIEVEPFDCWGIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCVANDAKTVVSFLQ 913
P +EVE FD WGIDFMGPFP S L+ILV VDYV+KWVEAI + ND+ V+ +
Sbjct: 257 PPNFRLEVEVFDRWGIDFMGPFPPSNKNLYILVDVDYVSKWVEAIASLKNDSAVVMKLFK 316
Query: 914 KNIFTRFGTPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQTSAQVEVSNRQLKQ 973
IF RFG PR++ISDG KHF N +LE +L +Y ++H+VATPYHPQTS QVEVSNRQ+K+
Sbjct: 317 SIIFPRFGVPRIVISDGDKHFINKILEKLLLQYGVQHRVATPYHPQTSGQVEVSNRQIKE 376
Query: 974 ILEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACHLPVELEHKAYWAIK 1033
ILEKT+ +K+WS KL DALWAY+TAFKT LG +P+ L+YGKACHLPVELEHKA WA+K
Sbjct: 377 ILEKTVGKAKKEWSYKLYDALWAYKTAFKTPLGTTPFHLLYGKACHLPVELEHKAAWAVK 436
Query: 1034 ALNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQLVLLY 1093
+NFD +AG+ +EL+E+R+ AY+N+ +YK RTK YHDK +++R +L +
Sbjct: 437 MMNFDIKSAGE------SELDEIRIHAYDNSKLYKERTKAYHDKKILTRTFEPNDQILRF 490
Score = 69.3 bits (168), Expect = 1e-11
Identities = 32/41 (78%), Positives = 37/41 (90%)
Query: 666 LTKGDSKPRLLRWILLLQEFDLEIRDKKGVENVVADHLSRL 706
+ K D+KPRLL WILLLQEFD+E+RDKKGVEN VADHLSR+
Sbjct: 1 MQKKDAKPRLLIWILLLQEFDIEVRDKKGVENGVADHLSRI 41
>At2g12040 T10J7.2
Length = 976
Score = 306 bits (784), Expect = 4e-83
Identities = 167/382 (43%), Positives = 224/382 (57%), Gaps = 41/382 (10%)
Query: 734 PWFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAGEEAH 793
PW+AD+ + ++ D+F + +K+F ++ Y WD PYL ++ GE
Sbjct: 459 PWYADIVIYLGADVELDNFIDYNKKRFLREIRRYYWDKPYL----PISIVLMEFIGE--- 511
Query: 794 SIMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISKRNEM 853
M C+ + S R SG C + D CQR G IS NEM
Sbjct: 512 --MHCCNRDSI--QSSSSRLLVAYNVSG---------CSEIHIASDPCQRRGKISNCNEM 558
Query: 854 PLTGIIEVEPFDCWGIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCVANDAKTVVSFLQ 913
P I+EV+ FDCWGI+FMGP P S L+ILV VDYV+KWVEAI ND+ V+ +
Sbjct: 559 PQKFILEVKVFDCWGINFMGPIPPSNKNLYILVVVDYVSKWVEAIASPKNDSAVVMKLFK 618
Query: 914 KNIFTRFGTPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQTSAQVEVSNRQLKQ 973
IF FG PR++ISDGGKHF N +L +L +Y ++H+VATPYHPQTS QVEVSNRQ+K+
Sbjct: 619 CIIFPHFGVPRIVISDGGKHFINKILTKLLLQYGVQHRVATPYHPQTSGQVEVSNRQIKE 678
Query: 974 ILEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACHLPVELEHKAYWAIK 1033
ILEKT+ AFKT LG +P+ L+YGKACHLPVELEHKA W +K
Sbjct: 679 ILEKTV--------------------AFKTPLGTTPFHLLYGKACHLPVELEHKAAWTVK 718
Query: 1034 ALNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQLVLLY 1093
LNFD +AG++RL++LNEL+E+++ AY+N+ +YK RTK YHDK +++R
Sbjct: 719 MLNFDIKSAGERRLIQLNELDEIQIHAYDNSKLYKERTKAYHDKKILTRTFEPKDQKKKK 778
Query: 1094 NSRLKLFPGK-LKSKWSGPFLV 1114
K F G+ KS+ G L+
Sbjct: 779 TRETKPFKGRGKKSERVGSLLI 800
Score = 164 bits (415), Expect = 3e-40
Identities = 80/106 (75%), Positives = 92/106 (86%)
Query: 601 VLGQRKNKFFHAIYYASKVLNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHA 660
VLGQRK+K HAIYYAS+ L++ + NYATTEKE LAV+FA EKFRSYL+G KVIV TDHA
Sbjct: 255 VLGQRKDKKLHAIYYASRTLDDAKRNYATTEKEFLAVVFAFEKFRSYLVGLKVIVHTDHA 314
Query: 661 ALKYLLTKGDSKPRLLRWILLLQEFDLEIRDKKGVENVVADHLSRL 706
ALKYL+ D+KPRLLRWILLLQEFD+E+RDKKGVE VADHLSR+
Sbjct: 315 ALKYLMQNKDAKPRLLRWILLLQEFDIEVRDKKGVEKCVADHLSRI 360
Score = 38.5 bits (88), Expect = 0.023
Identities = 17/26 (65%), Positives = 22/26 (84%)
Query: 575 QRCMLSIFSDMIEKNIEVFMDDFSAF 600
+R M+SIF+DMIE +EVFMDDFS +
Sbjct: 79 ERGMMSIFTDMIEDIMEVFMDDFSVY 104
Score = 35.8 bits (81), Expect = 0.15
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 411 MHRIHMEAEYKPVVQPQRRLNPTMKEVVKKEVL 443
MHRIH+E E K V+ QRRLN K+ ++K +L
Sbjct: 1 MHRIHLEDESKSSVEHQRRLNLIQKKRLRKRLL 33
>At2g07410 putative retroelement pol polyprotein
Length = 411
Score = 269 bits (687), Expect = 8e-72
Identities = 146/287 (50%), Positives = 183/287 (62%), Gaps = 38/287 (13%)
Query: 872 MGPFPSSYSFLHILVCVDYVTKWVEAIPCVANDAKTVVSFLQKNIFTRFGTPRVLISDGG 931
MG FPSSY +ILV VDYV+KWVEAI NDAK V+ + IFTRFG V+ISDG
Sbjct: 1 MGSFPSSYGNKYILVAVDYVSKWVEAIVSPTNDAKVVLKLFKTIIFTRFGVHMVVISDGR 60
Query: 932 KHFCNNLLENVLKKYNIRHKVATPYHPQTSAQVEVSNRQLKQILEKTIASNRKDWSKKLD 991
KHF N EN+LKK+ ++HKVAT YHPQTS QVE+SNR++K ILEKT+ RKD S KLD
Sbjct: 61 KHFINKAFENLLKKHGVKHKVATSYHPQTSGQVEISNREIKAILEKTVGVTRKDLSAKLD 120
Query: 992 DALWAYRTAFKTH----LGFSPYQLVYGKACHLPVELEHKAYWAIKALNFDQLAAGKKRL 1047
DALWAY+TAFKT +G +P+ L+Y K+ HLP+ELE KA WA+K +NFD A ++RL
Sbjct: 121 DALWAYKTAFKTAFKTPIGTTPFNLLYAKSGHLPIELEFKAMWAVKLMNFDIKTAEEERL 180
Query: 1048 LKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQLVLLYNSRLKLFPGKLKSK 1107
++LN+L+E+RL AYE++ YK + K LKS+
Sbjct: 181 IQLNDLDEIRLEAYESSKNYKGKRK-------------------------------LKSR 209
Query: 1108 WSGPFLVKSVLPHGAVELMTPEGDRSFKVNGQRVKPYLGGD-LPKER 1153
GPF V + P+GAV L GD F VNGQR+K YL LPK +
Sbjct: 210 LFGPFCVTEIRPYGAVTLAVKSGD--FTVNGQRLKKYLEDQILPKNK 254
>At4g07610
Length = 276
Score = 229 bits (584), Expect = 7e-60
Identities = 122/278 (43%), Positives = 166/278 (58%), Gaps = 34/278 (12%)
Query: 682 LQEFDLEIRDKKGVENVVADHLSRLDNKEVTKKKGAIMAEFPDEKLFAIGERPWFADMAN 741
++ FD+EI DKK +EN ADHLSR+ +E +++ +E+L +
Sbjct: 5 IRGFDIEIVDKKDIENGAADHLSRMRIEERIPIDDSML----EEQLMVV----------E 50
Query: 742 FKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAGEEAHSIMWHCHS 801
F G+ E+HQ N P+ R V+ +E I+ HCH
Sbjct: 51 FFGGSY--SGKEFHQ-------LNVVEGRSPW-----------RYVSEDEVEGILLHCHC 90
Query: 802 SAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISKRNEMPLTGIIEV 861
S YGG+ + +T +K+LQ+GFWWPT+FK+ +FV +CD C R G+ISKRNEMP I+EV
Sbjct: 91 STYGGNFTTFKTVSKILQAGFWWPTMFKEAQEFVLKCDSCHRKGNISKRNEMPQNPILEV 150
Query: 862 EPFDCWGIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCVANDAKTVVSFLQKNIFTRFG 921
E FD WGIDF+GPFPSSY +ILV VDYV+KW+EA NDAK V+ + IF+RFG
Sbjct: 151 ELFDVWGIDFIGPFPSSYGNKYILVAVDYVSKWIEATASPTNDAKVVLKLFKTIIFSRFG 210
Query: 922 TPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQ 959
PRV+ISDGGKHF N + EN+LKK+ ++H V + Q
Sbjct: 211 VPRVVISDGGKHFINKVFENLLKKHGVKHGVYVMFKTQ 248
>At4g07600
Length = 630
Score = 224 bits (570), Expect = 3e-58
Identities = 107/162 (66%), Positives = 125/162 (77%), Gaps = 9/162 (5%)
Query: 447 NAG-MIYPISDSSW-------VSPVHVVPKKGGMTVVANDKNELIPTRTVTGWRMCIDYR 498
N+G I P SD W VSPV +PKKGG+TV+ N+K+ELIP RT+TG RMCIDYR
Sbjct: 304 NSGEQIIPTSDD-WSKLKAPKVSPVQCIPKKGGITVIKNEKDELIPIRTITGLRMCIDYR 362
Query: 499 RLNSATRKDHFPLPFMDQMIERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTAFTCPFGVF 558
LN+A+R DHFPLPF DQM+ERLA +YCFLDGYS + QI + P D EKT FTCP+G F
Sbjct: 363 NLNAASRNDHFPLPFTDQMLERLANHPYYCFLDGYSGFFQIPIHPNDHEKTTFTCPYGTF 422
Query: 559 AYRRMPFGLCGAPATFQRCMLSIFSDMIEKNIEVFMDDFSAF 600
AY RMPFGLC APATFQRCM SIFSD+IE+ +EVFMDDFS +
Sbjct: 423 AYERMPFGLCNAPATFQRCMTSIFSDIIEEMVEVFMDDFSVY 464
Score = 141 bits (355), Expect = 2e-33
Identities = 79/217 (36%), Positives = 134/217 (61%), Gaps = 3/217 (1%)
Query: 63 FMQLFSQLQVNIPFGEALDQMPVYAKFMKEMLTGRRKPKDDENISLSENCSAILQRKL-P 121
F + ++++ IP +AL + KF+K+++ R + + LS CSAI+Q+K+ P
Sbjct: 2 FAKNIKEVELRIPLVDALALILDTHKFLKDLIVERIQEVQGM-VVLSHECSAIIQKKIVP 60
Query: 122 PKLKDPGAFTIPCSIGPIDIGRALCDLGASINLMPLSMMKKIGGGEPKPTRMTLTLADRS 181
KL DPG+FT+PC +G + R LCDLGA ++ MPLS+ K++G + K ++L LADRS
Sbjct: 61 KKLSDPGSFTLPCFLGTVAFNRCLCDLGALVSPMPLSIAKRLGFTQYKSCNISLILADRS 120
Query: 182 ISYPFGVLEDVLVKVNDLIFPGDFVILDMAEDEDMPLILGRPFLATGRALIDVEMGQLML 241
+ G+L+++ +++ DFVIL+M E+ PLIL RPFLAT A+IDV+ G++ L
Sbjct: 121 VRISHGLLKNLPIRIGAAEISTDFVILEMDEEPKDPLILRRPFLATAGAMIDVKKGKIDL 180
Query: 242 RFHNE-QVVLNIFEAMKHRAENPKCYRIDVIDEIVED 277
+ ++ +I +AMK + + I+ +D++ ++
Sbjct: 181 NLGKDFRMTFDIKDAMKKPNIEGQLFWIEEMDQLADE 217
Score = 45.8 bits (107), Expect = 1e-04
Identities = 22/34 (64%), Positives = 26/34 (75%)
Query: 601 VLGQRKNKFFHAIYYASKVLNENQVNYATTEKEL 634
VLGQ+ +K H IYYAS+ L+E Q YATTEKEL
Sbjct: 597 VLGQKIDKKLHVIYYASRTLDEAQGRYATTEKEL 630
>At4g07590
Length = 860
Score = 217 bits (552), Expect = 4e-56
Identities = 104/183 (56%), Positives = 134/183 (72%), Gaps = 2/183 (1%)
Query: 970 QLKQILEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACHLPVELEHKAY 1029
++K ILEKT+ RKDWS KLDDALWAY TAFKT +G + ++L+YGK+CHLPVELE+KA
Sbjct: 26 EIKTILEKTVGITRKDWSAKLDDALWAYMTAFKTPIGTTSFKLLYGKSCHLPVELEYKAM 85
Query: 1030 WAIKALNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQL 1089
W +K LNFD A +KRL++L +L+E+RL AYE + IYK TK +HDK ++++D G
Sbjct: 86 WTVKLLNFDIKTAEEKRLIQLRDLDEIRLEAYERSKIYKEGTKLFHDKKIITKDFQVGDQ 145
Query: 1090 VLLYNSRLKLFPGKLKSKWSGPFLVKSVLPHGAVELMTPEGDRSFKVNGQRVKPYLGGDL 1149
VLL+NSRLKLFPGKLKS+WSG F + + P+GAV L GD F VN QR+K YL +
Sbjct: 146 VLLFNSRLKLFPGKLKSRWSGLFCITEIRPYGAVTLAGKSGD--FTVNDQRLKKYLADQI 203
Query: 1150 PKE 1152
E
Sbjct: 204 LPE 206
>At2g15410 putative retroelement pol polyprotein
Length = 1787
Score = 206 bits (523), Expect = 8e-53
Identities = 123/398 (30%), Positives = 192/398 (47%), Gaps = 5/398 (1%)
Query: 735 WFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAGEEAHS 794
W ++ ++ A IVP D ++ R+ + A Y +L + S G++ C+ EEA
Sbjct: 1376 WIEEIRSYIADRIVPKD-KWAARRLRARSAQ-YTLPHEHLLRWSATGVLLSCLDDEEAQQ 1433
Query: 795 IMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISKRNEMP 854
+M H A G H G K+ + G +WPT+ DC FVARC+KCQ
Sbjct: 1434 VMREIHEGAGGNHSGGRALALKIRKHGQYWPTMNADCEKFVARCEKCQGHAPFIHIPSEV 1493
Query: 855 LTGIIEVEPFDCWGIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCVANDAKTVVSFLQK 914
L + PF W +D + PFP+S +ILV DY TKW EA +K V +F+ K
Sbjct: 1494 LQTAMPPYPFMRWAMDIIRPFPASRQKKYILVMTDYFTKWFEAESYARIQSKEVQNFVWK 1553
Query: 915 NIFTRFGTPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQTSAQVEVSNRQLKQI 974
NI G P +++D G F + E K+ IR +TP +PQ + Q E +N+ +
Sbjct: 1554 NIICHHGLPYEIVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQAEATNKTILDG 1613
Query: 975 LEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACHLPVELEHKAYWAIKA 1034
L+K + + W+ +LD LW+YRT + +P+ L YG P E
Sbjct: 1614 LKKRLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCEAGLPTVRRSML 1673
Query: 1035 LNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQLVL--L 1092
+N D + L L+ LEE R +A Y+ ++++K + +R G LVL +
Sbjct: 1674 IN-DPTLNDQMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVKNRLFAEGDLVLRKV 1732
Query: 1093 YNSRLKLFPGKLKSKWSGPFLVKSVLPHGAVELMTPEG 1130
+ + ++ GKL + W GP+L+ V+ G EL+T +G
Sbjct: 1733 FENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDG 1770
Score = 159 bits (401), Expect = 1e-38
Identities = 86/263 (32%), Positives = 135/263 (50%), Gaps = 23/263 (8%)
Query: 381 EEKLMRVLRENQGALGWKISDLKGISPAYCMHRIHMEAEYKPVVQPQRRLNPTMKEVVKK 440
+ +L+ LR+N W + D+ GI A H ++++ YKP+ Q +R+L P + V +
Sbjct: 741 QNELVNFLRQNAATFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDRTKDVNE 800
Query: 441 EVLKLLNAGMIYPISDSSWVSPVHVVPKKGGMTVVANDKNELIPTRTVTGWRMCIDYRRL 500
EV KLL+AG I + W+ VV KK G WR+CID+ L
Sbjct: 801 EVKKLLDAGSIVEVRYPDWLRNPVVVKKKNGK------------------WRVCIDFTDL 842
Query: 501 NSATRKDHFPLPFMDQMIERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTAFTCPFGVFAY 560
N A KD FPLP +D+++E AG F+D +S YNQI + D+EKT F G + Y
Sbjct: 843 NKACPKDSFPLPHIDRLVEATAGNELLSFMDAFSGYNQILMHQNDREKTVFITDQGTYCY 902
Query: 561 RRMPFGLCGAPATFQRCMLSIFSDMIEKNIEVFMDDFSAFVLGQRKN-----KFFHAIYY 615
+ MPFGL A AT+ R + +F+D ++ ++EV++DD L ++ + F +
Sbjct: 903 KVMPFGLKNAGATYPRLVNQMFTDQLDHSMEVYIDDMLVKSLRAEEHITHLRQCFQVLNR 962
Query: 616 ASKVLNENQVNYATTEKELLAVI 638
+ LN ++ + T E L +
Sbjct: 963 YNMKLNPSKCTFGVTSGEFLGYL 985
Score = 48.5 bits (114), Expect = 2e-05
Identities = 26/82 (31%), Positives = 42/82 (50%), Gaps = 1/82 (1%)
Query: 611 HAIYYASKVLNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHAALKYLLTKGD 670
H I+Y SK L+ ++ Y T EK AV+ + K R Y V V T+ L+ +L
Sbjct: 1083 HPIFYVSKTLDGAELRYPTLEKLAFAVVISARKLRPYFKSYTVEVLTNQ-PLRTILHSPS 1141
Query: 671 SKPRLLRWILLLQEFDLEIRDK 692
RL +W + L E+D+ +++
Sbjct: 1142 QSGRLAKWAVELSEYDIAYKNR 1163
>At1g20390 hypothetical protein
Length = 1791
Score = 203 bits (517), Expect = 4e-52
Identities = 134/468 (28%), Positives = 225/468 (47%), Gaps = 14/468 (2%)
Query: 666 LTKGDSKPRLLRWILLLQEFDLEIRDKKGVENVVADHLSRLDNKEVTKKKGAIMAEFPDE 725
+ +GD+ P L L D ++R VE++ + D E+ + A P +
Sbjct: 1318 IPRGDNAPADALAALALTS-DSDLRRIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPAD 1376
Query: 726 KLFAIGERPWFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRR 785
W ++ ++ + +P D ++ R+ K A + + + +L KVS G M
Sbjct: 1377 PT------DWRVEIRDYLSDGTLPSD-KWTARRLRIKAAKYTLMKE-HLLKVSAFGAMLN 1428
Query: 786 CVAGEEAHSIMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTG 845
C+ G E + IM H A G H G K+ + GF+WPT+ DC F A+C++CQR
Sbjct: 1429 CLHGTEINEIMKETHEGAAGNHSGGRALALKLKKLGFYWPTMISDCKTFTAKCEQCQRHA 1488
Query: 846 -SISKRNEMPLTGIIEVEPFDCWGIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCVAND 904
+I + E+ G+ PF W +D +GP P+S ILV DY TKWVEA
Sbjct: 1489 PTIHQPTELLRAGVAPY-PFMRWAMDIVGPMPASRQKRFILVMTDYFTKWVEAESYATIR 1547
Query: 905 AKTVVSFLQKNIFTRFGTPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQTSAQV 964
A V +F+ K I R G P +I+D G F + EN + IR +TP +PQ + Q
Sbjct: 1548 ANDVQNFVWKFIICRHGLPYEIITDNGSQFISLSFENFCASWKIRLNKSTPRYPQGNGQA 1607
Query: 965 EVSNRQLKQILEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACHLPVEL 1024
E +N+ + L+K + + W+ +LD LW+YRT ++ +P+ YG P E+
Sbjct: 1608 EATNKTILSGLKKRLDEKKGAWADELDGVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEV 1667
Query: 1025 EHKAYWAIKALNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVSRDI 1084
+ + + +L + L +L++LEE+R A Y+ +++++ + +R
Sbjct: 1668 GYSSLRRSMMVKNPEL-NDRMMLDRLDDLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHF 1726
Query: 1085 NSGQLVL--LYNSRLKLFPGKLKSKWSGPFLVKSVLPHGAVELMTPEG 1130
+ G LVL ++ + ++ GKL + W G + V ++ G EL+T G
Sbjct: 1727 DVGDLVLRKVFENTAEINAGKLGANWEGSYQVSKIVRPGDYELLTMSG 1774
Score = 163 bits (413), Expect = 5e-40
Identities = 88/261 (33%), Positives = 133/261 (50%), Gaps = 23/261 (8%)
Query: 383 KLMRVLRENQGALGWKISDLKGISPAYCMHRIHMEAEYKPVVQPQRRLNPTMKEVVKKEV 442
+L+ +L+ N W I D+KGI PA H ++++ +KPV Q +R+L P V +EV
Sbjct: 738 ELIALLKRNSKTFAWSIEDMKGIDPAITAHELNVDPTFKPVKQKRRKLGPERARAVNEEV 797
Query: 443 LKLLNAGMIYPISDSSWVSPVHVVPKKGGMTVVANDKNELIPTRTVTGWRMCIDYRRLNS 502
KLL AG I + W++ VV KK G WR+C+DY LN
Sbjct: 798 EKLLKAGQIIEVKYPEWLANPVVVKKKNGK------------------WRVCVDYTDLNK 839
Query: 503 ATRKDHFPLPFMDQMIERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTAFTCPFGVFAYRR 562
A KD +PLP +D+++E +G F+D +S YNQI + +DQEKT+F G + Y+
Sbjct: 840 ACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTDRGTYCYKV 899
Query: 563 MPFGLCGAPATFQRCMLSIFSDMIEKNIEVFMDDFSAFVLG-----QRKNKFFHAIYYAS 617
M FGL A AT+QR + + +D I + +EV++DD L + +K F +
Sbjct: 900 MSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKCFDVLNTYG 959
Query: 618 KVLNENQVNYATTEKELLAVI 638
LN + + T E L +
Sbjct: 960 MKLNPTKCTFGVTSGEFLGYV 980
Score = 52.4 bits (124), Expect = 2e-06
Identities = 31/95 (32%), Positives = 48/95 (49%), Gaps = 2/95 (2%)
Query: 613 IYYASKVLNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHAALKYLLTKGDSK 672
I+Y SK L E + Y EK LAV+ + K R Y + V TD L+ L
Sbjct: 1100 IFYTSKSLVEAETRYPVIEKAALAVVTSARKLRPYFQSHTIAVLTDQ-PLRVALHSPSQS 1158
Query: 673 PRLLRWILLLQEFDLEIRDKKGVEN-VVADHLSRL 706
R+ +W + L E+D++ R + +++ V+AD L L
Sbjct: 1159 GRMTKWAVELSEYDIDFRPRPAMKSQVLADFLIEL 1193
>At4g07640 putative athila transposon protein
Length = 866
Score = 203 bits (516), Expect = 5e-52
Identities = 136/427 (31%), Positives = 227/427 (52%), Gaps = 41/427 (9%)
Query: 29 LKDGDKPQIIPSYV-KLPYPHLAKKKKKEEGQFKKFMQLFSQLQVNIPFGEALDQMPVYA 87
+K+ +K + P Y +LP+P KK ++ + F + ++++ IP +AL +P
Sbjct: 440 VKNKEKVFVPPPYKPELPFPGRHKKALADKYR-AMFAKNIKEVELRIPLVDALALIPDSH 498
Query: 88 KFMKEMLTGRRKPKDDENISLSENCSAILQRKL-PPKLKDPGAFTIPCSIGPIDIGRALC 146
KF+K+++ R + + LS CSAI+Q+K+ P KL DPG+FT+PCS+GP+ R LC
Sbjct: 499 KFLKDLIVERIQEVQGM-VVLSHGCSAIIQKKIIPKKLSDPGSFTLPCSLGPLAFNRCLC 557
Query: 147 DLGASINLMPLSMMKKIGGGEPKPTRMTLTLADRSISYPFGVLEDVLVKVNDLIFPGDFV 206
DLGAS++LM LS+ K++G + K + ++L LADRS+ P G+L++ + + + P DFV
Sbjct: 558 DLGASVSLMALSVAKRLGFTQYKSSNISLILADRSVRIPHGLLKNFGITIGAVEIPTDFV 617
Query: 207 ILDMAEDEDMPLILGRPFLATGRALIDVEMGQLMLRFHNE-QVVLNIFEAMKHRAENPKC 265
+L+M E+ PLILGRPFLAT A+IDV+ G++ L + ++ ++ +AMK +
Sbjct: 618 VLEMDEEPKDPLILGRPFLATAGAMIDVKKGKIDLSLGKDFRMTFDVKDAMKKPTIEGQL 677
Query: 266 YRIDVIDEIVEDDSRAPQPTQPLERTIVNSLES-------------CDLDEDLEVKECIK 312
+ I +D++ ++ L + S E D ++ +E E +
Sbjct: 678 FWIKEMDQLADELLEELAEEDHLNSALTKSGEDGFLHLETFGYQKLLDSNKAMEESEPFE 737
Query: 313 QLEASKQEL------GPVKIEEILGEISKG---------------PQSSRKEEEKNP--E 349
+L E+ G +++ L P S E K P +
Sbjct: 738 ELNEPATEVMVMSEEGSTRVQPALSRTYSTSHSTLSANESGEPIIPTSDDWSELKAPKVD 797
Query: 350 LKELPSNLKYVFLSKDTSKPAIISSTLTLLEEEKLMRVLRENQGALGWKISDLKGISPAY 409
LK LP L+Y FL +++ P II++ L E L+ LR+ + A+G+ +SD+KGISP+
Sbjct: 798 LKPLPKGLRYAFLGPNSTYPVIINAELNSDEVNLLLSELRKYRRAIGYSLSDIKGISPSL 857
Query: 410 CMHRIHM 416
C RI +
Sbjct: 858 CNQRISL 864
>At2g11680 putative retroelement pol polyprotein
Length = 301
Score = 177 bits (450), Expect = 2e-44
Identities = 97/200 (48%), Positives = 127/200 (63%), Gaps = 27/200 (13%)
Query: 591 EVFMDDFS---AFVLGQRKNKFFHAIYYASKVLNENQVNYATTEKELLAVIFALEKFRSY 647
E+ DD VLGQ+ ++ H IYYAS +++ QV YATTEKELLAV+FA EKFRSY
Sbjct: 106 EIMCDDSDYAVGAVLGQKIDRKLHVIYYASGTMDDTQVRYATTEKELLAVVFAFEKFRSY 165
Query: 648 LIGSKVIVFTDHAALKYLLTKGDSKPRLLRWILLLQEFDLEIRDKKGVENVVADHLSRLD 707
L+GSKV V+TDHAAL+++ K D+KPRLLRWILLLQEFD+EI DKKG+EN VADHLSR+
Sbjct: 166 LVGSKVTVYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGVADHLSRMR 225
Query: 708 NKEVTKKKGAIMAEFPDEKLFAI--------------------GERPWFADMANFKAGNI 747
++ + I P+E+L AI + W+AD + G
Sbjct: 226 IED----EVPIDDSMPEEQLMAIQQLNESAQINKSLDQVCAVEDKLMWYADHVKYLFGGE 281
Query: 748 VPDDFEYHQRKKFFKDANHY 767
P + +++KKFFKD NH+
Sbjct: 282 EPPNLSSYEKKKFFKDINHF 301
>At1g35370 hypothetical protein
Length = 1447
Score = 163 bits (413), Expect = 5e-40
Identities = 144/519 (27%), Positives = 236/519 (44%), Gaps = 51/519 (9%)
Query: 611 HAIYYASKVLNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHAALKYLLTKGD 670
H + Y S+ L Q++ + EKELLA IFA+ K+R YL+ S I+ TD +LKYLL +
Sbjct: 887 HPLAYISRQLKGKQLHLSIYEKELLAFIFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRL 946
Query: 671 SKPRLLRWILLLQEFDLEIRDKKGVENVVADHLSRLDNKEVTKKKGAIM-AEFPDEKLFA 729
+ P +W+ L EFD EI+ ++G EN+VAD LSR++ EV +I+ +F E A
Sbjct: 947 NTPVQQQWLPKLLEFDYEIQYRQGKENLVADALSRVEGSEVLHMALSIVECDFLKEIQVA 1006
Query: 730 IGERPWFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAG 789
+++ ++ D Q+ K HY W L + S +
Sbjct: 1007 ------------YESDGVLKDIISALQQHPDAK--KHYSWSQDILRRKSKIVVPNDV--- 1049
Query: 790 EEAHSIMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISK 849
E + ++ H S GG SG + + ++S F+W + KD F+ C CQ+ K
Sbjct: 1050 EITNKLLQWLHCSGMGG-RSGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQ----CK 1104
Query: 850 RNEMPLTGIIEVEPF--DCW---GIDFMGPFPSSYSFLHILVCVDYVTKWVEAIPCV-AN 903
+ G+++ P W +DF+ P+S I+V VD ++K +
Sbjct: 1105 SDNAAYPGLLQPLPIPDKIWCDVSMDFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPY 1164
Query: 904 DAKTVVSFLQKNIFTRFGTPRVLISDGGKHFCNNLLENVLKKYNIRHKVATPYHPQTSAQ 963
A TV N++ G P ++SD F ++ + K + ++++ YHPQ+ Q
Sbjct: 1165 SALTVAQAFLDNVYKHHGCPTSIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQ 1224
Query: 964 VEVSNRQLKQILEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKA--CHLP 1021
EV NR L+ L + W+K L A + Y T + + +P++LVYG+A HLP
Sbjct: 1225 TEVVNRCLENYLRCMCHARPHLWNKWLPLAEYWYNTNYHSSSQMTPFELVYGQAPPIHLP 1284
Query: 1022 VELEHKAYWAIKALNFDQLAAGKKRLLKLNELEEMRLRAYENALIYKARTKRYHDKNLVS 1081
L K+ A+ A + L E E M L + + + R K++ D++
Sbjct: 1285 Y-LPGKSKVAVVARS-------------LQERENMLLFLKFHLMRAQHRMKQFADQHRTE 1330
Query: 1082 RDINSGQLVLL------YNSRLKLFPGKLKSKWSGPFLV 1114
R + G V + S + KL K+ GP+ +
Sbjct: 1331 RTFDIGDFVYVKLQPYRQQSVVLRVNQKLSPKYFGPYKI 1369
Score = 108 bits (271), Expect = 1e-23
Identities = 65/185 (35%), Positives = 94/185 (50%), Gaps = 19/185 (10%)
Query: 412 HRIHMEAEYKPVVQPQRRLNPTMKEVVKKEVLKLLNAGMIYPISDSSWVSPVHVVPKKGG 471
H+I + PV Q R K+ + K V ++ +G I +S S + SPV +V KK G
Sbjct: 570 HKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMIKSGTIQ-VSSSPFASPVVLVKKKDG 628
Query: 472 MTVVANDKNELIPTRTVTGWRMCIDYRRLNSATRKDHFPLPFMDQMIERLAGQAFYCFLD 531
WR+C+DY LN T KD F +P ++ +++ L G + +D
Sbjct: 629 T------------------WRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSVVFSKID 670
Query: 532 GYSRYNQIAVAPEDQEKTAFTCPFGVFAYRRMPFGLCGAPATFQRCMLSIFSDMIEKNIE 591
+ Y+Q+ + P+D +KTAF G F Y M FGL APATFQ M S+F D + K +
Sbjct: 671 LRAGYHQVRMDPDDIQKTAFKTHNGHFEYLVMLFGLTNAPATFQSLMNSVFRDFLRKFVL 730
Query: 592 VFMDD 596
VF DD
Sbjct: 731 VFFDD 735
>At2g15100 putative retroelement pol polyprotein
Length = 1329
Score = 154 bits (388), Expect = 4e-37
Identities = 101/367 (27%), Positives = 170/367 (45%), Gaps = 26/367 (7%)
Query: 775 FKVSTDGLMRR--------CVAGEEAHSIMWHCHSSAYGGHHSGERTTAKVLQSGFWWPT 826
F ++ D L RR C+ GE+ ++M H G H G KV + G++WPT
Sbjct: 961 FCIANDILYRRIFSAPDAVCIFGEQTRTVMKEVHDGTCGNHTGGRSLAFKVRKYGYYWPT 1020
Query: 827 LFKDCHDFVARCDKCQRTGSISKRNEMPLTGIIEVEPFDCWGIDFMGPFPSSYSFLHILV 886
L DC + +C++CQ+ + + LT + PF W +D +GP LH+
Sbjct: 1021 LVADCEAYARKCEQCQKHAPLILQPAELLTTVSAPYPFMKWLMDIVGP-------LHVS- 1072
Query: 887 CVDYVTKWVEAIPCVANDAKTVVSFLQKNIFTRFGTPRVLISDGGKHFCNNLLENVLKKY 946
T+ VEA V +F+ K+I R G P +++D G F + E +++
Sbjct: 1073 -----TRGVEAAAYSNITHVQVWNFIWKDIICRHGLPYEIVTDNGSQFISEQFEVFCEEW 1127
Query: 947 NIRHKVATPYHPQTSAQVEVSNRQLKQILEKTIASNRKDWSKKLDDALWAYRTAFKTHLG 1006
IR +TP +PQ + Q E N+ + L+K + + + W +L + LWA RT +
Sbjct: 1128 QIRLSHSTPRYPQGNGQAEAMNKTIISNLKKKLNAYKGAWFGELQNVLWAVRTTPRRATD 1187
Query: 1007 FSPYQLVYGKACHLPVELEHKAYWAIKALNFDQLAAGKKRLLK-LNELEEMRLRAYENAL 1065
+P+ L+YG +P E+ K A + N + ++ ++ ++E R RA
Sbjct: 1188 ETPFSLIYGMEAVIPAEI--KVPSARRIRNPQNETENNEMIIDVIDTIDERRNRALARMQ 1245
Query: 1066 IYKARTKRYHDKNLVSRDINSGQLVL--LYNSRLKLFPGKLKSKWSGPFLVKSVLPHGAV 1123
Y RY++ N+ +R G LVL + ++ + GKL W GP+ + V+ +G
Sbjct: 1246 NYHNAGARYYNSNVRNRSFEVGTLVLRRVQQNKAEKGAGKLGISWEGPYKITHVVRNGVY 1305
Query: 1124 ELMTPEG 1130
L+ EG
Sbjct: 1306 RLINMEG 1312
Score = 123 bits (309), Expect = 5e-28
Identities = 65/179 (36%), Positives = 94/179 (52%), Gaps = 20/179 (11%)
Query: 399 ISDLKGISPAYCMHRIHMEAEYKPVVQPQRRLNPTMKEVVKKEVLKLLNAGMIYPISDSS 458
+ + GIS H ++++ +KPV Q +R+L P + V EV++LL G I +
Sbjct: 409 VGKMTGISTEVISHELNVDPTFKPVKQKRRKLGPDRAQAVNIEVVRLLEVGRIREVKYPE 468
Query: 459 WVSPVHVVPKKGGMTVVANDKNELIPTRTVTGWRMCIDYRRLNSATRKDHFPLPFMDQMI 518
W++ VV KK G WR+C+D+ LN A KD FPLP +D+++
Sbjct: 469 WLANPVVVKKKNGK------------------WRVCVDFTDLNKACSKDFFPLPHIDRLV 510
Query: 519 ERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTAFTCPFGVFAYRRMPFGLCGAPATFQRC 577
E G F+D +S YNQI + PEDQEKT+F G + Y+ MPFGL A + RC
Sbjct: 511 ESTTGHEMLSFMDAFSGYNQILMNPEDQEKTSFITECGTYYYKVMPFGL--KNAVYFRC 567
Score = 41.2 bits (95), Expect = 0.003
Identities = 24/76 (31%), Positives = 36/76 (46%), Gaps = 1/76 (1%)
Query: 624 QVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHAALKYLLTKGDSKPRLLRWILLLQ 683
+ Y EK LAV+ A K R Y ++V T L+ +L RL +W + L
Sbjct: 691 KTRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTS-LPLRTILHSPTQSGRLGKWAIELS 749
Query: 684 EFDLEIRDKKGVENVV 699
EFDLE R + + + +
Sbjct: 750 EFDLEFRARTSLNSTM 765
>At1g37200 hypothetical protein
Length = 1564
Score = 148 bits (374), Expect = 2e-35
Identities = 89/280 (31%), Positives = 143/280 (50%), Gaps = 29/280 (10%)
Query: 318 KQELGPVKIEEILGEISKGPQSSRKEEEKNPELKELPSNLKYVFLSKDTSKPAI-ISSTL 376
K EL + IE+ L E+ S + P+ S++ V++ + K + + L
Sbjct: 586 KAELVVLMIEDKLAEMKTVRSSD--PSQCGPQ----KSSITQVYIDESDPKQCVGVGQDL 639
Query: 377 TLLEEEKLMRVLRENQGALGWKISDLKGISPAYCMHRIHMEAEYKPVVQPQRRLNPTMKE 436
E + L+EN+ + W ++L+GIS H ++++ Y+P+ Q +R+L P +
Sbjct: 640 DPAIREDFITFLKENKDSFAWSSANLQGISLEVTSHELNVDPTYRPIKQKRRKLGPERAK 699
Query: 437 VVKKEVLKLLNAGMIYPISDSSWVSPVHVVPKKGGMTVVANDKNELIPTRTVTGWRMCID 496
V+ EV +LL G I + W++ VV K G WR+CID
Sbjct: 700 AVQDEVDRLLKIGSIREVKYPDWLANPVVVKNKNGK------------------WRVCID 741
Query: 497 YRRLNSATRKDHFPLPFMDQMIERLAGQAFYCFLDGYSRYNQIAVAPEDQEKTAFTCPFG 556
+ LN A KD FPLP +D++++ AG F+D +S YNQI + P+DQEKTAF
Sbjct: 742 FMDLNKACPKDSFPLPHIDRLVKATAGHELLSFMDAFSGYNQILMRPDDQEKTAFITD-- 799
Query: 557 VFAYRRMPFGLCGAPATFQRCMLSIFSDMIEKNIEVFMDD 596
Y+ MPFGL AT+QR + +F+D + K +E+++DD
Sbjct: 800 --CYKVMPFGLKNTGATYQRLVNRMFADQLGKTMELYIDD 837
Score = 73.9 bits (180), Expect = 5e-13
Identities = 58/214 (27%), Positives = 86/214 (40%), Gaps = 23/214 (10%)
Query: 735 WFADMANFKAGNIVPDDFEYHQRKKFFKDANHYVWDDPYLFKVSTDGLMRRCVAGEEAHS 794
W + ++ I P D ++ RK + A + + + L K S G C G++
Sbjct: 1248 WRIPIIDYIERGITPPD-KWETRKLKAQSARYCIMEGR-LMKRSVAGPYMVCTYGQQTKD 1305
Query: 795 IMWHCHSSAYGGHHSGERTTAKVLQSGFWWPTLFKDCHDFVARCDKCQRTGSISKRNEMP 854
+M H G H+SG +L DC RCDKCQR +
Sbjct: 1306 LMKSMHEGQCGSHYSGRTLRCIMLA----------DCIAHSLRCDKCQRHAPTLHQPPEE 1355
Query: 855 LTGIIEVEPFDCWGIDFMGPFPSSYS---FLHILVCVDYVTKWVEAIPCVANDAKTVVSF 911
++ I PF W +D + P +S ++LV DY TKW+E K V F
Sbjct: 1356 MSSISSPYPFMKWSMDVVRPMEASGGKKRLKNLLVLTDYSTKWIEGKAFQQVTEKQVEVF 1415
Query: 912 LQKNIFTRFGTPRVLISDGG--------KHFCNN 937
L +NI R G P +++D G KHF +
Sbjct: 1416 LLENIVYRHGIPYEIVTDNGLTSPREKSKHFATS 1449
Score = 55.1 bits (131), Expect = 2e-07
Identities = 35/108 (32%), Positives = 53/108 (48%), Gaps = 7/108 (6%)
Query: 613 IYYASKVLNENQVNYATTEKELLAVIFALEKFRSYLIGSKVIVFTDHAALKYLLTKGDSK 672
IYY SK L + + +Y EK LAV+ + K R YL ++V T ++ +L
Sbjct: 934 IYYVSKTLIDAETHYRAMEKLALAVVMSARKLRQYLQSHPIVVMTSQ-PIRTILHSTTQS 992
Query: 673 PRLLRWILLLQEFDLEIRDKKGVE-NVVADH-----LSRLDNKEVTKK 714
RL +W + L E+D+E R + + V+AD L+ LD KK
Sbjct: 993 SRLAKWAIELSEYDIEYRTRTSFKAQVLADFVIELPLADLDGTNSNKK 1040
Score = 39.7 bits (91), Expect = 0.010
Identities = 22/76 (28%), Positives = 40/76 (51%), Gaps = 2/76 (2%)
Query: 1053 LEEMRLRAYENALIYKARTKRYHDKNLVSRDINSGQLVL--LYNSRLKLFPGKLKSKWSG 1110
++E R A Y+ RY++ N+ R G+LVL ++++ +L GKL + W G
Sbjct: 1467 IDERRDHAMIQVQNYQQPAVRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTNWEG 1526
Query: 1111 PFLVKSVLPHGAVELM 1126
P+ + V+ G +L+
Sbjct: 1527 PYRITEVVRDGIYKLV 1542
>At4g07370
Length = 531
Score = 147 bits (370), Expect = 5e-35
Identities = 104/329 (31%), Positives = 171/329 (51%), Gaps = 33/329 (10%)
Query: 38 IPSYVKLPYPHLAKKKKKEEGQFKK-FMQLFSQLQVNIPFGEALDQMPVYAKFMKEMLTG 96
IP K P P + KK+ E +++ F + ++++ IP +AL +P KF+K+++
Sbjct: 142 IPPPYKPPLPFPGRHKKEVEDKYRAMFAKNIKKVELRIPLADALTHIPDSQKFLKDLIME 201
Query: 97 RRKPKDDENISLSENCSAILQRK-LPPKLKDPGAFTIPCSIGPIDIGRALCDLGASINLM 155
R + + LS CSAI+Q + KL DPG+FT+PCS+G + + LCDLG S+NLM
Sbjct: 202 RIQEVQKTTV-LSHECSAIIQENDVSEKLGDPGSFTLPCSLGSLTFNKCLCDLGPSVNLM 260
Query: 156 PLSMMKKIGGGEPKPTRMTLTLADRSISYPFGVLEDVLVKVNDLIFPGDFVILDMAEDED 215
PLS+ K RS+ P G+LED+ +K+ ++ P DFV+L+M E+
Sbjct: 261 PLSVAK------------------RSVRLPHGLLEDLPIKIRNVEVPTDFVVLNMDEEPK 302
Query: 216 MPLILGRPFLATGRALIDVEMGQLMLRF-HNEQVVLNIFEAMKHRAENPKCYRIDVIDEI 274
PLILGRPFLAT +IDV+ G++ L N ++ +I +AMK + + + +D +
Sbjct: 303 DPLILGRPFLATVGVIIDVKQGKIDLNLGKNFEMKFDINDAMKKPTIEEQTFLVKEVDRL 362
Query: 275 VEDDSRAPQPTQPLERTIVNSLESCDLDEDLEVKECIKQLEASKQELGPVKIEEILGEIS 334
+ P E ++S +S + + + K L S ++ +K E +
Sbjct: 363 AGELQSGKPGYLPSE--TLSSEKSLESHKAAVGSQVYKGLMESDTKI--IKANE--DKAI 416
Query: 335 KGPQSSRKE-----EEKNPELKELPSNLK 358
+ P KE +E N +L ++P N+K
Sbjct: 417 QRPTHIVKELKDQIKELNRKLNQVPLNIK 445
>At2g10620 putative Athila retroelement ORF1 protein
Length = 451
Score = 144 bits (364), Expect = 2e-34
Identities = 84/237 (35%), Positives = 142/237 (59%), Gaps = 7/237 (2%)
Query: 25 KSQILKDGDKPQIIPSYVKLPYPHLAKKKKKEEGQFKK--FMQLFSQLQVNIPFGEALDQ 82
K ++K+ +K + P Y P+P + KK + F + ++++ IP +AL
Sbjct: 192 KPVVVKNKEKVFVPPPYK--PHPSFPGRHKKALAHKYRVMFAKNIKEVELQIPLVDALAL 249
Query: 83 MPVYAKFMKEMLTGRRKPKDDENISLSENCSAILQRKL-PPKLKDPGAFTIPCSIGPIDI 141
+ KF+K+++ R + + LS+ CSAI+Q+K+ KL DPG+FT+PCS+GP+
Sbjct: 250 IMDSHKFLKDLIVERIQELQGM-VVLSDECSAIIQKKIIHKKLSDPGSFTLPCSLGPLAF 308
Query: 142 GRALCDLGASINLMPLSMMKKIGGGEPKPTRMTLTLADRSISYPFGVLEDVLVKVNDLIF 201
+ LCDLGAS +LMPLS+ K++G + K ++L LADRS+ P LE++ +++ +
Sbjct: 309 NKCLCDLGASASLMPLSVTKRLGFTQYKSCNISLILADRSVRIPHDFLENIPIRIRAVEI 368
Query: 202 PGDFVILDMAEDEDMPLILGRPFLATGRALIDVEMGQLMLRFHNE-QVVLNIFEAMK 257
P DFV+L+M E+ LILGRPFL T A+I ++ G++ L + ++ ++ + MK
Sbjct: 369 PTDFVVLEMDEEPKDHLILGRPFLTTVGAMIYIKKGKINLNLGKDFRMTFDVKDTMK 425
>At2g10690 putative retroelement pol polyprotein
Length = 622
Score = 142 bits (358), Expect = 1e-33
Identities = 83/182 (45%), Positives = 108/182 (58%), Gaps = 40/182 (21%)
Query: 591 EVFMDDFS---AFVLGQRKNKFFHAIYYASKVLNENQVNYATTEKELLAVIFALEKFRSY 647
E+ D F VL Q+ + H IYYAS+ ++E Q YAT EKELLAV+FA EK RSY
Sbjct: 351 EIMCDAFDYAVGAVLDQKIDDKLHVIYYASRTMDEAQTRYATIEKELLAVVFAFEKIRSY 410
Query: 648 LIGSKVIVFTDHAALKYLLTKGDSKPRLLRWILLLQEFDLEIRDKKGVENVVADHLSRL- 706
L+G KV V+ DHAAL+++ K ++K RLLRWILLLQEFD+EI DKKGVEN VADHLSR+
Sbjct: 411 LVGFKVKVYIDHAALRHIYAKKETKSRLLRWILLLQEFDMEIIDKKGVENGVADHLSRMR 470
Query: 707 --------------------------DNKEVTKKKGAIMAEFPDEKLFAIGERPWFADMA 740
D K++ ++ A+ +EKL PW+AD+
Sbjct: 471 IEDSVPIDDTMPEEQLMFYDLVNKSFDTKDMPEEADAV----EEEKL------PWYADLV 520
Query: 741 NF 742
N+
Sbjct: 521 NY 522
Score = 128 bits (322), Expect = 2e-29
Identities = 58/98 (59%), Positives = 78/98 (79%)
Query: 960 TSAQVEVSNRQLKQILEKTIASNRKDWSKKLDDALWAYRTAFKTHLGFSPYQLVYGKACH 1019
TS QVEVSNRQ+K IL K + +++DWS KLD+ LWAYRTA+KT +G +P+Q++YGK+CH
Sbjct: 524 TSGQVEVSNRQMKDILTKVVGVSKRDWSTKLDETLWAYRTAYKTPIGRTPFQMLYGKSCH 583
Query: 1020 LPVELEHKAYWAIKALNFDQLAAGKKRLLKLNELEEMR 1057
LPVE+E+KA WA K LN + A +KR + L+ELEE+R
Sbjct: 584 LPVEVEYKAIWATKLLNLEIKGAQEKRPIDLHELEEIR 621
Score = 85.5 bits (210), Expect = 2e-16
Identities = 39/55 (70%), Positives = 44/55 (79%)
Query: 546 QEKTAFTCPFGVFAYRRMPFGLCGAPATFQRCMLSIFSDMIEKNIEVFMDDFSAF 600
++KT FTCP G FAY+RM FGLC AP TFQR M SIFSD IE+ +EVFMDDFS F
Sbjct: 163 KKKTTFTCPNGTFAYKRMSFGLCNAPGTFQRSMTSIFSDFIEEIMEVFMDDFSGF 217
Score = 35.0 bits (79), Expect = 0.25
Identities = 23/70 (32%), Positives = 36/70 (50%), Gaps = 2/70 (2%)
Query: 328 EILGEISKGPQSSRKEEEKNP--ELKELPSNLKYVFLSKDTSKPAIISSTLTLLEEEKLM 385
E+L + S E K P +LK LP L+Y FL + + P II+ L+ + +L+
Sbjct: 81 EMLDHGGENISSDDLSELKAPKLDLKPLPKGLRYAFLGPNDTYPVIINDGLSDEQVNQLL 140
Query: 386 RVLRENQGAL 395
LR+ +G L
Sbjct: 141 NELRKYRGQL 150
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.138 0.413
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,051,308
Number of Sequences: 26719
Number of extensions: 1230665
Number of successful extensions: 3632
Number of sequences better than 10.0: 145
Number of HSP's better than 10.0 without gapping: 110
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 3289
Number of HSP's gapped (non-prelim): 291
length of query: 1161
length of database: 11,318,596
effective HSP length: 110
effective length of query: 1051
effective length of database: 8,379,506
effective search space: 8806860806
effective search space used: 8806860806
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Medicago: description of AC148291.6