BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148289.14 - phase: 0
(497 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g17930 unknown protein 40 0.003
At1g05320 unknown protein 34 0.16
At1g57690 32 0.81
At3g48520 cytochrome P450-like protein 30 2.4
At3g44630 putative disease resistance protein 30 3.1
At5g41140 putative protein 30 4.0
At2g39380 hypothetical protein 30 4.0
At5g63480 unknown protein 29 5.2
At3g15620 6-4 photolyase (UVR3) 29 5.2
At3g48860 putative protein 28 8.9
At1g09470 hypothetical protein 28 8.9
>At1g17930 unknown protein
Length = 478
Score = 40.0 bits (92), Expect = 0.003
Identities = 59/223 (26%), Positives = 96/223 (42%), Gaps = 21/223 (9%)
Query: 72 NIEKGCLETLVQFYDPAYHCFTFPDYQLMPTLEEYSHLIGLPVLDKVPFTGLEPFPKAAT 131
++ + LV+ + + F FP ++ TL+E S ++GL V D P G++ + +
Sbjct: 61 SLNNSLISALVERWRRETNTFHFPCGEMTITLDEVSLILGLAV-DGKPVVGVKEKDEDPS 119
Query: 132 IANALHLKTSLIKEKLTLKGNLPSLPTKFLYQQASEFSKTNNV-EAFYSILALLIY--GL 188
L L L K +L+ GN + K+L + +E K + E Y A LIY G
Sbjct: 120 QV-CLRLLGKLPKGELS--GN--RVTAKWLKESFAECPKGATMKEIEYHTRAYLIYIVGS 174
Query: 189 VLFPNID-NYVDIHAIQIFLTKNPV------PTLLADIYHSIHDRTQVGRGAILGCAPLL 241
+F D + + + + +F LA +Y I + +Q + I GC LL
Sbjct: 175 TIFATTDPSKISVDYLILFEDFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCLTLL 234
Query: 242 YKWFTSHL----PQTHSFQANPENLSWPKRIMSLTPSDITWYR 280
W HL P+ + Q P L W R S + +D+ YR
Sbjct: 235 QCWSYFHLNIDRPKRTTRQF-PLALLWKGRQQSRSKNDLFKYR 276
>At1g05320 unknown protein
Length = 841
Score = 34.3 bits (77), Expect = 0.16
Identities = 19/67 (28%), Positives = 35/67 (51%)
Query: 412 VEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQ 471
+EE + ++ + V+ T K + +EA+LK+ T+ IE+ E E L +K N ++ Q
Sbjct: 455 IEEHKRQVLEASGVADTRKVEVEEALLKLNTLESTIEELEKENGDLAEVNIKLNQKLANQ 514
Query: 472 STRLSQF 478
+ F
Sbjct: 515 GSETDDF 521
>At1g57690
Length = 330
Score = 32.0 bits (71), Expect = 0.81
Identities = 38/138 (27%), Positives = 53/138 (37%), Gaps = 22/138 (15%)
Query: 37 FRKLDLENLKKLAFEVTSLENFRDRHGNLL--GVLWTNIEK-----------------GC 77
FR + ++ V SL + D H + GV WT+++K GC
Sbjct: 114 FRSNKIPRFYEINSSVKSLSHRLDLHDVIPRHGVSWTSLKKFSLSYCGLPDESAKILSGC 173
Query: 78 --LETLVQFYDPAYHCFTFPDYQLMPTLEEYSHLIGLPVLDKVPFTGLEPFPKAATIANA 135
LE +Q P HC + QL TL + S L VLD + F + A
Sbjct: 174 PILEWPMQIVAPQIHCLKLRNTQLPCTLVDVSSLTEAEVLDIIIFPVNLSYNADFLHATM 233
Query: 136 LHLKTSLIK-EKLTLKGN 152
L + L EKLT G+
Sbjct: 234 LEMLKKLKNVEKLTFSGS 251
>At3g48520 cytochrome P450-like protein
Length = 506
Score = 30.4 bits (67), Expect = 2.4
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 12/105 (11%)
Query: 393 PRYLSSTTPAPALPLAPATVEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEH 452
P L T P L A T E + A +E + A WK K +L V + K+ +
Sbjct: 196 PDCLDLTRPVNPLVEAFDTAAEISARRA-TEPIYAVWKTK---RVLNVGS-ERKLREAIR 250
Query: 453 EVHKLRRQIV---KKNVQI----RAQSTRLSQFISAGERWEFFKD 490
VH L +IV KK+++I A+ LS+F++AG E +D
Sbjct: 251 TVHVLVSEIVRAKKKSLEIGTGAEAKQDLLSRFLAAGHNGEAVRD 295
>At3g44630 putative disease resistance protein
Length = 1214
Score = 30.0 bits (66), Expect = 3.1
Identities = 17/46 (36%), Positives = 26/46 (55%)
Query: 100 MPTLEEYSHLIGLPVLDKVPFTGLEPFPKAATIANALHLKTSLIKE 145
+ TL +LI L +LD + L+ FP+ +T + L LK + IKE
Sbjct: 894 LETLPTNINLISLRILDLTDCSQLKSFPEISTHISELRLKGTAIKE 939
>At5g41140 putative protein
Length = 983
Score = 29.6 bits (65), Expect = 4.0
Identities = 13/64 (20%), Positives = 29/64 (45%)
Query: 413 EECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQS 472
EE Q + E V K + + A+ + + + E E+ LR+Q+V+ ++ +
Sbjct: 763 EELQRIIDEKEAVITALKSQLETAIAPCDNLKHSLSNNESEIENLRKQVVQVRSELEKKE 822
Query: 473 TRLS 476
++
Sbjct: 823 EEMA 826
>At2g39380 hypothetical protein
Length = 637
Score = 29.6 bits (65), Expect = 4.0
Identities = 25/105 (23%), Positives = 40/105 (37%), Gaps = 13/105 (12%)
Query: 167 EFSKTNNVEAFYSILALLIYGLVLFPNIDNYVDIHAIQIFLTKNPVPTLLADIYHSIHDR 226
E N+ + + +LI+ L ++Y D+ +FL N + D S H R
Sbjct: 424 EDEHNNHAVSVHLAWLILIFLCKLDIKAESYKDVSLSYLFLVNNI--QFVVDTVRSTHLR 481
Query: 227 TQVGRGAILGCAPLLYKWFTSHLPQTHSFQANPENLSWPKRIMSL 271
+G W T H + S+ AN E +W +SL
Sbjct: 482 NLLGDD-----------WLTKHEAKLRSYAANYEIAAWANVYISL 515
>At5g63480 unknown protein
Length = 189
Score = 29.3 bits (64), Expect = 5.2
Identities = 13/41 (31%), Positives = 23/41 (55%)
Query: 446 KIEQQEHEVHKLRRQIVKKNVQIRAQSTRLSQFISAGERWE 486
+IE+ E + LR +I KKNV ++ +L + I+ W+
Sbjct: 144 EIEKLEEQALSLRMEIAKKNVHVKELIDKLRELIADISTWQ 184
>At3g15620 6-4 photolyase (UVR3)
Length = 556
Score = 29.3 bits (64), Expect = 5.2
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 3/60 (5%)
Query: 401 PAPALPLAPATVEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEHEVHKLRRQ 460
P P + L + +EC+ K+ + ++ K DE L+ + K+++ EHE K+R Q
Sbjct: 495 PKPMV-LHDSASKECKRKMGEAYALNKKMDGKVDEENLR--DLRRKLQKDEHEESKIRNQ 551
>At3g48860 putative protein
Length = 609
Score = 28.5 bits (62), Expect = 8.9
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 393 PRYLSSTTPAPALPLAPATVEECQEKLARSECVSATWKRKYDEAMLKVETISGKIEQQEH 452
P +S TP PL P T + A V++ K EA + + E+ E+
Sbjct: 171 PSRVSVKTPVSIPPLDPPTRSRDKRFFADVPSVNSKEKGDQREASALRDELDMLQEENEN 230
Query: 453 EVHKLRRQIVKKNVQIRAQSTRL-SQFISAGE 483
+ KLRR +K V+ A++ L Q S GE
Sbjct: 231 VLEKLRR-AEEKRVEAEARAKELEKQVASLGE 261
>At1g09470 hypothetical protein
Length = 359
Score = 28.5 bits (62), Expect = 8.9
Identities = 14/45 (31%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 435 EAMLKVETISGKIEQQEHEVHKLRRQIVKKNVQIRAQSTRLSQFI 479
EAM + E + ++++ E E+H+L +++ +K QIRA +F+
Sbjct: 52 EAMSRQEAET-RVKRMEDEMHELAKELNEKVEQIRASDVATEKFV 95
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.137 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,355,222
Number of Sequences: 26719
Number of extensions: 500594
Number of successful extensions: 1317
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1310
Number of HSP's gapped (non-prelim): 14
length of query: 497
length of database: 11,318,596
effective HSP length: 103
effective length of query: 394
effective length of database: 8,566,539
effective search space: 3375216366
effective search space used: 3375216366
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)
Medicago: description of AC148289.14