Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148289.1 + phase: 0 
         (340 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g16530 auxin efflux carrier -like protein                          465  e-131
At5g15100 auxin transport protein - like                              256  2e-68
At2g01420 auxin transporter splice variant b (PIN4)                   178  3e-45
At1g70940 auxin transport like protein                                177  7e-45
At1g23080 auxin transport protein (PIN7)                              175  4e-44
At1g73590 auxin transporter splice variant b, putative                171  4e-43
At5g57090 root gravitropism control protein (PIN2)                    171  5e-43
At1g77110 auxin transport protein (PIN6)                              146  2e-35
At5g37010 serine-rich protein - like                                   29  4.2
At2g39210 nodulin-like protein                                         28  5.5
At4g39110 putative receptor-like protein kinase                        28  9.4

>At5g16530 auxin efflux carrier -like protein
          Length = 351

 Score =  465 bits (1197), Expect = e-131
 Identities = 235/340 (69%), Positives = 274/340 (80%), Gaps = 12/340 (3%)

Query: 1   MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
           MI   DVYKVI A+VPLY ALILGYGSV+WW IFTR+QCDAIN+LVCYFTLPLF  EFTA
Sbjct: 1   MINCGDVYKVIEAMVPLYVALILGYGSVKWWHIFTRDQCDAINRLVCYFTLPLFTIEFTA 60

Query: 61  HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
           H+DPF MN+ FI AD LSK+IIV V+ALWAK S+K SY WSITSFSLCTLTNSLVVG+P+
Sbjct: 61  HVDPFNMNYRFIAADVLSKVIIVTVLALWAKYSNKGSYCWSITSFSLCTLTNSLVVGVPL 120

Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFRRTGIEGTITTLKPKASSISNVTCEG 180
            K MYG   VDLVVQ+SV QAI+WLTLLLFVLEFR+ G           +++IS+V  + 
Sbjct: 121 AKAMYGQQAVDLVVQSSVFQAIVWLTLLLFVLEFRKAGF---------SSNNISDVQVDN 171

Query: 181 EESKDVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRWNLELPS 240
              +  +   +V    S   FL++M  VWLKL  NPN Y C++GI+WAFISNRW+LELP 
Sbjct: 172 INIESGKRETVVVGEKS---FLEVMSLVWLKLATNPNCYSCILGIAWAFISNRWHLELPG 228

Query: 241 MVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAMAISAFI 300
           ++EGSILIMSKAGTGTAMF+MGIFMALQEK+I CG SLTV G+VLKFIAGPAAMAI + +
Sbjct: 229 ILEGSILIMSKAGTGTAMFNMGIFMALQEKLIVCGTSLTVMGMVLKFIAGPAAMAIGSIV 288

Query: 301 VGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLSTA 340
           +GL GDVLR+AIIQAA+PQSITSFIFAKEY LHA+VLSTA
Sbjct: 289 LGLHGDVLRVAIIQAALPQSITSFIFAKEYGLHADVLSTA 328


>At5g15100 auxin transport protein - like
          Length = 367

 Score =  256 bits (653), Expect = 2e-68
 Identities = 126/345 (36%), Positives = 205/345 (58%), Gaps = 6/345 (1%)

Query: 1   MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
           MI W D+Y V+ A VPLY ++ LG+ S R  K+F+ EQC  INK V  F++PL +F+  +
Sbjct: 1   MISWLDIYHVVSATVPLYVSMTLGFLSARHLKLFSPEQCAGINKFVAKFSIPLLSFQIIS 60

Query: 61  HIDPFKMNFLFIGADTLSKLIIVAVIAL----WAKCSSKVS-YSWSITSFSLCTLTNSLV 115
             +PFKM+   I +D L K ++V V+A+    W     +     W IT  S+  L N+L+
Sbjct: 61  ENNPFKMSPKLILSDILQKFLVVVVLAMVLRFWHPTGGRGGKLGWVITGLSISVLPNTLI 120

Query: 116 VGIPMVKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFRRT-GIEGTITTLKPKASSIS 174
           +G+P++  +YG     ++ Q  V+Q++IW T+LLF+ E      +  +  +L+   +   
Sbjct: 121 LGMPILSAIYGDEAASILEQIVVLQSLIWYTILLFLFELNAARALPSSGASLEHTGNDQE 180

Query: 175 NVTCEGEESKDVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRW 234
               E E  ++ +   +    +  +  ++++ + W KLI NPN+Y  +IGI WA +  R 
Sbjct: 181 EANIEDEPKEEEDEEEVAIVRTRSVGTMKILLKAWRKLIINPNTYATLIGIIWATLHFRL 240

Query: 235 NLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAM 294
              LP M++ SI ++S  G G AMFS+G+FMA Q  +I+CG  + +  ++LKF+ GPA M
Sbjct: 241 GWNLPEMIDKSIHLLSDGGLGMAMFSLGLFMASQSSIIACGTKMAIITMLLKFVLGPALM 300

Query: 295 AISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
             SA+ + L+  + ++AI+QAA+PQ +  F+FAKEY LH E++ST
Sbjct: 301 IASAYCIRLKSTLFKVAILQAALPQGVVPFVFAKEYNLHPEIIST 345


>At2g01420 auxin transporter splice variant b (PIN4)
          Length = 612

 Score =  178 bits (452), Expect = 3e-45
 Identities = 83/155 (53%), Positives = 109/155 (69%)

Query: 1   MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
           MI W D+Y V+ AVVPLY A+IL YGSV+WWKIF+ +QC  IN+ V  F +PL +F F +
Sbjct: 1   MITWHDLYTVLTAVVPLYVAMILAYGSVQWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
             DP+ MNF F+ ADTL K+I++ ++ALWA  +   S  W IT FSL TL N+LV+GIP+
Sbjct: 61  TNDPYAMNFRFVAADTLQKIIMLVLLALWANLTKNGSLEWMITIFSLSTLPNTLVMGIPL 120

Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
           +  MYG     L+VQ  V+Q IIW TLLLF+ E+R
Sbjct: 121 LIAMYGTYAGSLMVQVVVLQCIIWYTLLLFLFEYR 155



 Score =  162 bits (410), Expect = 2e-40
 Identities = 79/167 (47%), Positives = 113/167 (67%), Gaps = 1/167 (0%)

Query: 174 SNVTCEGEESK-DVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISN 232
           SN T E E +  D   NN      + +    ++  VW KLI NPN+Y  +IG+ WA ++ 
Sbjct: 424 SNSTAELEAAGGDGGGNNGTHMPPTSVMTRLILIMVWRKLIRNPNTYSSLIGLIWALVAY 483

Query: 233 RWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPA 292
           RW++ +P +++ SI I+S AG G AMFS+G+FMALQ K+I+CG S+  F + ++FI GPA
Sbjct: 484 RWHVAMPKILQQSISILSDAGLGMAMFSLGLFMALQPKIIACGNSVATFAMAVRFITGPA 543

Query: 293 AMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
            MA++   +GL GD+LRIAI+QAA+PQ I  F+FAKEY +H  +LST
Sbjct: 544 IMAVAGIAIGLHGDLLRIAIVQAALPQGIVPFVFAKEYNVHPTILST 590


>At1g70940 auxin transport like protein
          Length = 640

 Score =  177 bits (449), Expect = 7e-45
 Identities = 83/155 (53%), Positives = 109/155 (69%)

Query: 1   MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
           MI W D+Y V+ AV+PLY A+IL YGSVRWWKIF+ +QC  IN+ V  F +PL +F F +
Sbjct: 1   MISWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
             +P+ MN  FI ADTL K+I+++++ LWA  +   S  WSIT FSL TL N+LV+GIP+
Sbjct: 61  TNNPYAMNLRFIAADTLQKIIMLSLLVLWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
           +  MYG     L+VQ  V+Q IIW TLLLF+ EFR
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEFR 155



 Score =  163 bits (412), Expect = 1e-40
 Identities = 71/132 (53%), Positives = 102/132 (76%)

Query: 208 VWLKLIANPNSYGCVIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMAL 267
           VW KLI NPN+Y  +IG+ WA ++ RW++ +P +++ SI I+S AG G AMFS+G+FMAL
Sbjct: 487 VWRKLIRNPNTYSSLIGLIWALVAFRWHVAMPKIIQQSISILSDAGLGMAMFSLGLFMAL 546

Query: 268 QEKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFA 327
           Q K+I+CG S+  F + ++F+ GPA MA++A  +GLRGD+LR+AI+QAA+PQ I  F+FA
Sbjct: 547 QPKLIACGNSVATFAMAVRFLTGPAVMAVAAIAIGLRGDLLRVAIVQAALPQGIVPFVFA 606

Query: 328 KEYELHAEVLST 339
           KEY +H  +LST
Sbjct: 607 KEYNVHPAILST 618


>At1g23080 auxin transport protein (PIN7)
          Length = 619

 Score =  175 bits (443), Expect = 4e-44
 Identities = 82/155 (52%), Positives = 108/155 (68%)

Query: 1   MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
           MI W D+Y V+ AV+PLY A+IL YGSVRWWKIF+ +QC  IN+ V  F +PL +F F +
Sbjct: 1   MITWHDLYTVLTAVIPLYVAMILAYGSVRWWKIFSPDQCSGINRFVAIFAVPLLSFHFIS 60

Query: 61  HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
             +P+ MN  FI ADTL KLI++ ++ +WA  +   S  WSIT FSL TL N+LV+GIP+
Sbjct: 61  SNNPYAMNLRFIAADTLQKLIMLTLLIIWANFTRSGSLEWSITIFSLSTLPNTLVMGIPL 120

Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
           +  MYG     L+VQ  V+Q IIW TLLLF+ E+R
Sbjct: 121 LIAMYGEYSGSLMVQIVVLQCIIWYTLLLFLFEYR 155



 Score =  162 bits (410), Expect = 2e-40
 Identities = 79/170 (46%), Positives = 112/170 (65%), Gaps = 7/170 (4%)

Query: 175 NVTCEGEESKDVEANNIVEYTSSRLPFLQLMKR-----VWLKLIANPNSYGCVIGISWAF 229
           N T E    + +E    V      +P   +M R     VW KLI NPN+Y  +IG+ WA 
Sbjct: 430 NSTAELNPKEAIETGETVPV--KHMPPASVMTRLILIMVWRKLIRNPNTYSSLIGLIWAL 487

Query: 230 ISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIA 289
           ++ RW++ +P +++ SI I+S AG G AMFS+G+FMALQ K+I+CG S   F + ++F  
Sbjct: 488 VAFRWDVAMPKIIQQSISILSDAGLGMAMFSLGLFMALQPKLIACGNSTATFAMAVRFFT 547

Query: 290 GPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
           GPA MA++A  +GLRGD+LR+AI+QAA+PQ I  F+FAKEY +H  +LST
Sbjct: 548 GPAVMAVAAMAIGLRGDLLRVAIVQAALPQGIVPFVFAKEYNVHPAILST 597


>At1g73590 auxin transporter splice variant b, putative
          Length = 622

 Score =  171 bits (434), Expect = 4e-43
 Identities = 81/155 (52%), Positives = 109/155 (70%)

Query: 1   MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
           MI   D Y V+ A+VPLY A+IL YGSV+WWKIFT +QC  IN+ V  F +PL +F F A
Sbjct: 1   MITAADFYHVMTAMVPLYVAMILAYGSVKWWKIFTPDQCSGINRFVALFAVPLLSFHFIA 60

Query: 61  HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
             +P+ MN  F+ AD+L K+I+++++ LW K S   S  W+IT FSL TL N+LV+GIP+
Sbjct: 61  ANNPYAMNLRFLAADSLQKVIVLSLLFLWCKLSRNGSLDWTITLFSLSTLPNTLVMGIPL 120

Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
           +K MYG    DL+VQ  V+Q IIW TL+LF+ E+R
Sbjct: 121 LKGMYGNFSGDLMVQIVVLQCIIWYTLMLFLFEYR 155



 Score =  160 bits (404), Expect = 1e-39
 Identities = 85/192 (44%), Positives = 122/192 (63%), Gaps = 19/192 (9%)

Query: 168 PKASSISNVTCEGEE----SKDVEA--------NNIVEYTSSR--LPFLQLMKR-----V 208
           P+ +S  N   E EE    +KD ++        NNI   T+    +P   +M R     V
Sbjct: 410 PQGNSNDNQYVEREEFSFGNKDDDSKVLATDGGNNISNKTTQAKVMPPTSVMTRLILIMV 469

Query: 209 WLKLIANPNSYGCVIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMALQ 268
           W KLI NPNSY  + GI+W+ IS +WN+E+P+++  SI I+S AG G AMFS+G+FMAL 
Sbjct: 470 WRKLIRNPNSYSSLFGITWSLISFKWNIEMPALIAKSISILSDAGLGMAMFSLGLFMALN 529

Query: 269 EKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFAK 328
            ++I+CG     F   ++F+ GPA M ++++ VGLRG +L +AIIQAA+PQ I  F+FAK
Sbjct: 530 PRIIACGNRRAAFAAAMRFVVGPAVMLVASYAVGLRGVLLHVAIIQAALPQGIVPFVFAK 589

Query: 329 EYELHAEVLSTA 340
           EY +H ++LSTA
Sbjct: 590 EYNVHPDILSTA 601


>At5g57090 root gravitropism control protein (PIN2)
          Length = 647

 Score =  171 bits (433), Expect = 5e-43
 Identities = 80/155 (51%), Positives = 110/155 (70%)

Query: 1   MIGWEDVYKVIVAVVPLYFALILGYGSVRWWKIFTREQCDAINKLVCYFTLPLFAFEFTA 60
           MI  +D+Y V+ A+VPLY A+IL YGSVRWW IFT +QC  IN+ V  F +PL +F F +
Sbjct: 1   MITGKDMYDVLAAMVPLYVAMILAYGSVRWWGIFTPDQCSGINRFVAVFAVPLLSFHFIS 60

Query: 61  HIDPFKMNFLFIGADTLSKLIIVAVIALWAKCSSKVSYSWSITSFSLCTLTNSLVVGIPM 120
             DP+ MN+ F+ AD+L K++I+A + LW   S + S  W IT FSL TL N+LV+GIP+
Sbjct: 61  SNDPYAMNYHFLAADSLQKVVILAALFLWQAFSRRGSLEWMITLFSLSTLPNTLVMGIPL 120

Query: 121 VKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEFR 155
           ++ MYG    +L+VQ  V+Q+IIW TL+LF+ EFR
Sbjct: 121 LRAMYGDFSGNLMVQIVVLQSIIWYTLMLFLFEFR 155



 Score =  162 bits (411), Expect = 2e-40
 Identities = 69/133 (51%), Positives = 104/133 (77%)

Query: 208 VWLKLIANPNSYGCVIGISWAFISNRWNLELPSMVEGSILIMSKAGTGTAMFSMGIFMAL 267
           VW KLI NPN+Y  + G++W+ +S +WN+++P+++ GSI I+S AG G AMFS+G+FMAL
Sbjct: 494 VWRKLIRNPNTYSSLFGLAWSLVSFKWNIKMPTIMSGSISILSDAGLGMAMFSLGLFMAL 553

Query: 268 QEKVISCGPSLTVFGLVLKFIAGPAAMAISAFIVGLRGDVLRIAIIQAAVPQSITSFIFA 327
           Q K+I+CG S+  F + ++F+ GPA +A ++  +G+RGD+L IAI+QAA+PQ I  F+FA
Sbjct: 554 QPKIIACGKSVAGFAMAVRFLTGPAVIAATSIAIGIRGDLLHIAIVQAALPQGIVPFVFA 613

Query: 328 KEYELHAEVLSTA 340
           KEY +H ++LSTA
Sbjct: 614 KEYNVHPDILSTA 626


>At1g77110 auxin transport protein (PIN6)
          Length = 429

 Score =  146 bits (368), Expect = 2e-35
 Identities = 72/160 (45%), Positives = 108/160 (67%)

Query: 180 GEESKDVEANNIVEYTSSRLPFLQLMKRVWLKLIANPNSYGCVIGISWAFISNRWNLELP 239
           G+++  V A    E  S+ +    ++  V  KL  NPN+Y  ++G+ W+ IS +WN+ +P
Sbjct: 248 GKDTTPVAAIGKQEMPSAIVMMRLILTVVGRKLSRNPNTYSSLLGLVWSLISFKWNIPMP 307

Query: 240 SMVEGSILIMSKAGTGTAMFSMGIFMALQEKVISCGPSLTVFGLVLKFIAGPAAMAISAF 299
           ++V+ SI I+S AG G AMFS+G+FMALQ K+I CG      G++++FI+GP  MA ++ 
Sbjct: 308 NIVDFSIKIISDAGLGMAMFSLGLFMALQPKMIPCGAKKATMGMLIRFISGPLFMAGASL 367

Query: 300 IVGLRGDVLRIAIIQAAVPQSITSFIFAKEYELHAEVLST 339
           +VGLRG  L  AI+QAA+PQ I  F+FA+EY LH ++LST
Sbjct: 368 LVGLRGSRLHAAIVQAALPQGIVPFVFAREYNLHPDLLST 407


>At5g37010 serine-rich protein - like
          Length = 637

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 14/44 (31%), Positives = 26/44 (58%)

Query: 149 LFVLEFRRTGIEGTITTLKPKASSISNVTCEGEESKDVEANNIV 192
           +FV++ RR+  + + TT  P+ SS+S+V   G     V+ + I+
Sbjct: 73  VFVIKHRRSHEKSSKTTTDPEDSSVSDVKSTGSNHNPVDVDAIL 116


>At2g39210 nodulin-like protein
          Length = 601

 Score = 28.5 bits (62), Expect = 5.5
 Identities = 25/102 (24%), Positives = 45/102 (43%), Gaps = 14/102 (13%)

Query: 95  KVSYSWSITSFSLCTLTNSLVVGIPMVKPMYGPMGVDLVVQASVVQAIIWLTLLLFVLEF 154
           KV Y++   S  L T    +++    +  + G    +    A+VV  ++ L +++ +LE 
Sbjct: 214 KVFYNFLYISLGLATFLMVVII----INKLSGFTQSEFGGSAAVVIVLLLLPIIVVILEE 269

Query: 155 RRTGIEG----------TITTLKPKASSISNVTCEGEESKDV 186
           ++   E            + T KPK  S      +GEESK+V
Sbjct: 270 KKLWKEKQVALNDPAPINVVTEKPKLDSSEFKDDDGEESKEV 311


>At4g39110 putative receptor-like protein kinase
          Length = 878

 Score = 27.7 bits (60), Expect = 9.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 273 SCGPSLTVFGLVLKFIAGPAAMAISAFIVG 302
           S  PS+ +   +L F++GP+A A++A  VG
Sbjct: 18  SSKPSMALLLAILLFLSGPSASAVAAAAVG 47


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.326    0.139    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,953,534
Number of Sequences: 26719
Number of extensions: 267569
Number of successful extensions: 861
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 841
Number of HSP's gapped (non-prelim): 17
length of query: 340
length of database: 11,318,596
effective HSP length: 100
effective length of query: 240
effective length of database: 8,646,696
effective search space: 2075207040
effective search space used: 2075207040
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 60 (27.7 bits)


Medicago: description of AC148289.1