BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC148236.2 - phase: 0 /pseudo
         (362 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g38180 unknown protein (At4g38180)                                 244  7e-65
At4g15090 unknown protein                                             202  2e-52
At1g76320 putative phytochrome A signaling protein                    173  1e-43
At2g27110 Mutator-like transposase                                    169  2e-42
At3g22170 far-red impaired response protein, putative                 167  1e-41
At5g18960 FAR1 - like protein                                         165  3e-41
At3g06250 unknown protein                                             164  7e-41
At1g52520 F6D8.26                                                     149  3e-36
At1g80010 hypothetical protein                                        142  2e-34
At2g32250 Mutator-like transposase                                    139  2e-33
At1g10240 unknown protein                                             139  2e-33
At5g28530 far-red impaired response protein (FAR1) - like             127  9e-30
At4g19990 putative protein                                            118  4e-27
At4g38170 hypothetical protein                                        106  2e-23
At3g47280 putative protein                                             67  2e-11
At5g34890 putative protein                                             65  4e-11
At3g59470 unknown protein                                              65  6e-11
At2g15150 putative transposase of FARE2.2 (CDS1)                       63  2e-10
At3g32060 hypothetical protein                                         62  6e-10
At2g23500 Mutator-like transposase                                     62  6e-10

>At4g38180 unknown protein (At4g38180)
          Length = 788

 Score =  244 bits (622), Expect = 7e-65
 Identities = 129/358 (36%), Positives = 201/358 (56%), Gaps = 6/358 (1%)

Query: 4   DWNPKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHR-KKDGSVSSCRFVCCKEGMRKP 62
           D  P   + F S + A  F+N+Y  + GF  R   + R ++DG++   +FVC KEG R  
Sbjct: 70  DLEPYDGLEFESEEAAKAFYNSYARRIGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNM 129

Query: 63  DKR---DYKTKNPRLETRTNCEARLGLKNVD-GKLMVHDFVEDHNHELLLPETTHMLSSQ 118
           +++   D + K PR  TR  C+A L +K  D GK +V  FV+DHNHEL+ P+  H L S 
Sbjct: 130 NEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWLVSGFVKDHNHELVPPDQVHCLRSH 189

Query: 119 RKVSEIHCQQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSLVQG 178
           R++S      I+   + G+  ++    L KE GG + +GF  +D +NY+R  R++S ++G
Sbjct: 190 RQISGPAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQKS-IEG 248

Query: 179 EAGYLLQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCT 238
           E   LL Y ++   +NP F+++ Q   +  + NVFWAD + ++D+++FGD V+ D+TY +
Sbjct: 249 EIQLLLDYLRQMNADNPNFFYSVQGSEDQSVGNVFWADPKAIMDFTHFGDTVTFDTTYRS 308

Query: 239 NSSHRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAK 298
           N    P A  +G NHH   ++FG A + +ET  S+ WLF T+L A     P ++ TD   
Sbjct: 309 NRYRLPFAPFTGVNHHGQPILFGCAFIINETEASFVWLFNTWLAAMSAHPPVSITTDHDA 368

Query: 299 SMAKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
            +  A+  V P A H  C WH+++   + L ++      F SDF KC+   E VE FE
Sbjct: 369 VIRAAIMHVFPGARHRFCKWHILKKCQEKLSHVFLKHPSFESDFHKCVNLTESVEDFE 426


>At4g15090 unknown protein
          Length = 768

 Score =  202 bits (515), Expect = 2e-52
 Identities = 109/347 (31%), Positives = 187/347 (53%), Gaps = 12/347 (3%)

Query: 12  FFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKDGSVSSCRFVCCKEGMRKPDKRDYKTKN 71
           F  +++N W F  +          K+    KK       +F C + G+    +    +  
Sbjct: 7   FIRNMQNLWVFTTSI---------KNSRRSKKTKDFIDAKFACSRYGVTPESESSGSSSR 57

Query: 72  PRLETRTNCEARLGLKN-VDGKLMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHCQQIE 130
                +T+C+A + +K   DGK ++H+FV+DHNHELL P   +    QR V       I+
Sbjct: 58  RSTVKKTDCKASMHVKRRPDGKWIIHEFVKDHNHELL-PALAYHFRIQRNVKLAEKNNID 116

Query: 131 LADSVGVQQKKSFDLLSKEVGGRTNLG-FIRLDQKNYLRKKRERSLVQGEAGYLLQYFQR 189
           +  +V  + KK +  +S++ GG  N+G  ++ D  + + K R  +L +G++  LL+YF+R
Sbjct: 117 ILHAVSERTKKMYVEMSRQSGGYKNIGSLLQTDVSSQVDKGRYLALEEGDSQVLLEYFKR 176

Query: 190 KTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLAIIS 249
              ENP F++A  L+ + ++ N+FWADA+   DY  F DVVS D+TY   +   PLA+  
Sbjct: 177 IKKENPKFFYAIDLNEDQRLRNLFWADAKSRDDYLSFNDVVSFDTTYVKFNDKLPLALFI 236

Query: 250 GFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAEVMP 309
           G NHH   ++ G AL+ DE+ E++ WL +T+L A   + P+ + TDQ K +  A++E++P
Sbjct: 237 GVNHHSQPMLLGCALVADESMETFVWLIKTWLRAMGGRAPKVILTDQDKFLMSAVSELLP 296

Query: 310 EAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
              H    WH+++   ++  ++MK    FL  F KC++     ++F+
Sbjct: 297 NTRHCFALWHVLEKIPEYFSHVMKRHENFLLKFNKCIFRSWTDDEFD 343


>At1g76320 putative phytochrome A signaling protein
          Length = 670

 Score =  173 bits (439), Expect = 1e-43
 Identities = 108/349 (30%), Positives = 169/349 (47%), Gaps = 13/349 (3%)

Query: 11  MFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKDGS-VSSCRFVCCKEGMRKPDKRDYKT 69
           M F + ++A+ F+  Y    GFG  K  + R +        +F C + G ++        
Sbjct: 1   MEFETHEDAYLFYKDYAKSVGFGTAKLSSRRSRASKEFIDAKFSCIRYGSKQQSD---DA 57

Query: 70  KNPRLETRTNCEARLGLKN-VDGKLMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHCQQ 128
            NPR   +  C+A + +K   DGK  V+ FV++HNH+LL PE  H   S R    +    
Sbjct: 58  INPRASPKIGCKASMHVKRRPDGKWYVYSFVKEHNHDLL-PEQAHYFRSHRNTELVKSND 116

Query: 129 IELADSVGVQQKKSFDLLS-KEVGGRTNLGFIRLDQKNYLRKKRERSLVQGEAGYLLQYF 187
             L      ++KK+  L   K +    +L FI    +N   K R   L  G+A  LL++ 
Sbjct: 117 SRL------RRKKNTPLTDCKHLSAYHDLDFIDGYMRNQHDKGRRLVLDTGDAEILLEFL 170

Query: 188 QRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLAI 247
            R   ENP F+ A     +  + NVFW DA+ + DY  F DVVS +++Y  +    PL +
Sbjct: 171 MRMQEENPKFFFAVDFSEDHLLRNVFWVDAKGIEDYKSFSDVVSFETSYFVSKYKVPLVL 230

Query: 248 ISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAEV 307
             G NHH   V+ G  LL D+T  +Y WL +++L A   + P+ + TDQ  ++  A+A V
Sbjct: 231 FVGVNHHVQPVLLGCGLLADDTVYTYVWLMQSWLVAMGGQKPKVMLTDQNNAIKAAIAAV 290

Query: 308 MPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
           +PE  H  C WH++    ++L      +  F+    KC+Y     E+F+
Sbjct: 291 LPETRHCYCLWHVLDQLPRNLDYWSMWQDTFMKKLFKCIYRSWSEEEFD 339


>At2g27110 Mutator-like transposase
          Length = 851

 Score =  169 bits (428), Expect = 2e-42
 Identities = 112/350 (32%), Positives = 172/350 (49%), Gaps = 25/350 (7%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKDGSVSSCRFVCCKEGMRKPDKRD 66
           P V M F S K A  F++ Y  + GF  +      + DGSVS   FVC     R   KR 
Sbjct: 49  PCVGMEFNSEKEAKSFYDEYSRQLGFTSK---LLPRTDGSVSVREFVCSSSSKRS--KR- 102

Query: 67  YKTKNPRLETRTNCEARLGLKNVDGKLMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHC 126
                 RL    +   R+ L+  + K +V  FV++H H L      H L  +R  +    
Sbjct: 103 ------RLSESCDAMVRIELQGHE-KWVVTKFVKEHTHGLASSNMLHCLRPRRHFANSEK 155

Query: 127 QQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSLVQGEAGYLLQY 186
              +     GV        +S +   R          +N       +  +  +A  LL+Y
Sbjct: 156 SSYQ----EGVNVPSGMMYVSMDANSR--------GARNASMATNTKRTIGRDAHNLLEY 203

Query: 187 FQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLA 246
           F+R   ENP F++A QLD ++Q++NVFWAD+R  V Y++FGD V+LD+ Y  N    P A
Sbjct: 204 FKRMQAENPGFFYAVQLDEDNQMSNVFWADSRSRVAYTHFGDTVTLDTRYRCNQFRVPFA 263

Query: 247 IISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAE 306
             +G NHH  A++FG AL+ DE+  S+ WLF+TFL A + + P ++ TDQ +++  A  +
Sbjct: 264 PFTGVNHHGQAILFGCALILDESDTSFIWLFKTFLTAMRDQPPVSLVTDQDRAIQIAAGQ 323

Query: 307 VMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
           V P A H +  W +++ G + L ++      F  +   C+   E +E+FE
Sbjct: 324 VFPGARHCINKWDVLREGQEKLAHVCLAYPSFQVELYNCINFTETIEEFE 373


>At3g22170 far-red impaired response protein, putative
          Length = 814

 Score =  167 bits (422), Expect = 1e-41
 Identities = 106/364 (29%), Positives = 164/364 (44%), Gaps = 38/364 (10%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKDG-SVSSCRFVCCKEGMRKPDKR 65
           P   M F S   A+ F+  Y    GF      + R K        +F C + G ++   +
Sbjct: 70  PLNGMEFESHGEAYSFYQEYSRAMGFNTAIQNSRRSKTTREFIDAKFACSRYGTKREYDK 129

Query: 66  DYKTKNPRLE-------------TRTNCEARLGLKN-VDGKLMVHDFVEDHNHELLLPET 111
            +     R                +T+C+A + +K   DGK ++H FV +HNHELL    
Sbjct: 130 SFNRPRARQSKQDPENMAGRRTCAKTDCKASMHVKRRPDGKWVIHSFVREHNHELLP--- 186

Query: 112 THMLSSQRKVSEIHCQQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKR 171
                               A +V  Q +K +  ++K+      +  ++ D K+   K R
Sbjct: 187 --------------------AQAVSEQTRKIYAAMAKQFAEYKTVISLKSDSKSSFEKGR 226

Query: 172 ERSLVQGEAGYLLQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVS 231
             S+  G+   LL +  R    N  F++A  L  + ++ NVFW DA+   +Y  F DVVS
Sbjct: 227 TLSVETGDFKILLDFLSRMQSLNSNFFYAVDLGDDQRVKNVFWVDAKSRHNYGSFCDVVS 286

Query: 232 LDSTYCTNSSHRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQT 291
           LD+TY  N    PLAI  G N H   ++ G AL+ DE+A +Y WL ET+L A   + P+ 
Sbjct: 287 LDTTYVRNKYKMPLAIFVGVNQHYQYMVLGCALISDESAATYSWLMETWLRAIGGQAPKV 346

Query: 292 VFTDQAKSMAKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYED 351
           + T+    M   + E+ P   H L  WH++    ++LG ++K    F+  FEKC+Y    
Sbjct: 347 LITELDVVMNSIVPEIFPNTRHCLFLWHVLMKVSENLGQVVKQHDNFMPKFEKCIYKSGK 406

Query: 352 VEQF 355
            E F
Sbjct: 407 DEDF 410


>At5g18960 FAR1 - like protein
          Length = 788

 Score =  165 bits (418), Expect = 3e-41
 Identities = 112/357 (31%), Positives = 171/357 (47%), Gaps = 47/357 (13%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKK-DGSVSSCRFVCCKEGMRKPDKR 65
           P   + F S   A +F+  Y    GF VR     R K DGS++S RFVC +EG + P   
Sbjct: 211 PYAGLEFGSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSREGFQHP--- 267

Query: 66  DYKTKNPRLETRTNCEARLGLKNVD-GKLMVHDFVEDHNHELLLPETTHMLSSQRKVSEI 124
                     +R  C A + +K  D G  +V    +DHNH+L                  
Sbjct: 268 ----------SRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL------------------ 299

Query: 125 HCQQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQ--KNYLRKKRERSLVQGEAGY 182
                E         KK  D      GG  ++  I L+    N+++K RE  + +     
Sbjct: 300 -----EPGKKNDAGMKKIPD---DGTGGLDSVDLIELNDFGNNHIKKTRENRIGKEWYPL 351

Query: 183 LLQYFQRKTVENPTFYHAYQLDIED-QITNVFWADARMLVDYSYFGDVVSLDSTYCTNSS 241
           LL YFQ +  E+  F++A +LD+ +    ++FWAD+R     S FGD V  D++Y   S 
Sbjct: 352 LLDYFQSRQTEDMGFFYAVELDVNNGSCMSIFWADSRARFACSQFGDSVVFDTSYRKGSY 411

Query: 242 HRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMA 301
             P A I GFNHHR  V+ G A++ DE+ E++ WLF+T+L A   + P+++  DQ   + 
Sbjct: 412 SVPFATIIGFNHHRQPVLLGCAMVADESKEAFLWLFQTWLRAMSGRRPRSIVADQDLPIQ 471

Query: 302 KALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFEDV 358
           +AL +V P A+H    W + +   K   NL+   S F  ++EKC+Y  + + +F+ V
Sbjct: 472 QALVQVFPGAHHRYSAWQIRE---KERENLIPFPSEFKYEYEKCIYQTQTIVEFDSV 525



 Score = 62.0 bits (149), Expect = 5e-10
 Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 15/102 (14%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKK-DGSVSSCRFVCCKEGMRKPDKR 65
           P V + F + + A EF+N Y  + GF VR    +R + DG+VSS RFVC KEG       
Sbjct: 43  PYVGLEFDTAEEAREFYNAYAARTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF------ 96

Query: 66  DYKTKNPRLETRTNCEARLGLKNVD-GKLMVHDFVEDHNHEL 106
                  +L +RT C A + ++  D GK ++    ++HNHEL
Sbjct: 97  -------QLNSRTGCTAFIRVQRRDTGKWVLDQIQKEHNHEL 131


>At3g06250 unknown protein
          Length = 764

 Score =  164 bits (415), Expect = 7e-41
 Identities = 108/353 (30%), Positives = 165/353 (46%), Gaps = 46/353 (13%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKK-DGSVSSCRFVCCKEGMRKPDKR 65
           P   + F S   A +F+  Y    GF VR     R K DGS++S RFVC KEG + P   
Sbjct: 190 PYAGLEFNSANEACQFYQAYAEVVGFRVRIGQLFRSKVDGSITSRRFVCSKEGFQHP--- 246

Query: 66  DYKTKNPRLETRTNCEARLGLKNVD-GKLMVHDFVEDHNHELLLPETTHMLSSQRKVSEI 124
                     +R  C A + +K  D G  +V    +DHNH+L   E     +  +K+++ 
Sbjct: 247 ----------SRMGCGAYMRIKRQDSGGWIVDRLNKDHNHDL---EPGKKNAGMKKITD- 292

Query: 125 HCQQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRL-DQKNYLRKKRERSLVQGEAGYL 183
                                     GG  ++  I L D  N++   RE ++ +     L
Sbjct: 293 -----------------------DVTGGLDSVDLIELNDLSNHISSTRENTIGKEWYPVL 329

Query: 184 LQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHR 243
           L YFQ K  E+  F++A +LD      ++FWAD+R     S FGD V  D++Y       
Sbjct: 330 LDYFQSKQAEDMGFFYAIELDSNGSCMSIFWADSRSRFACSQFGDAVVFDTSYRKGDYSV 389

Query: 244 PLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKA 303
           P A   GFNHHR  V+ G AL+ DE+ E++ WLF+T+L A   + P+++  DQ   + +A
Sbjct: 390 PFATFIGFNHHRQPVLLGGALVADESKEAFSWLFQTWLRAMSGRRPRSMVADQDLPIQQA 449

Query: 304 LAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
           +A+V P  +H    W +     K   NL    + F  ++EKC+Y  +   +F+
Sbjct: 450 VAQVFPGTHHRFSAWQIRS---KERENLRSFPNEFKYEYEKCLYQSQTTVEFD 499



 Score = 58.2 bits (139), Expect = 7e-09
 Identities = 35/102 (34%), Positives = 56/102 (54%), Gaps = 15/102 (14%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKK-DGSVSSCRFVCCKEGMRKPDKR 65
           P V + F + + A +++N+Y  + GF VR    +R + DG+VSS RFVC KEG       
Sbjct: 28  PYVGLEFDTAEEARDYYNSYATRTGFKVRTGQLYRSRTDGTVSSRRFVCSKEGF------ 81

Query: 66  DYKTKNPRLETRTNCEARLGLKNVD-GKLMVHDFVEDHNHEL 106
                  +L +RT C A + ++  D GK ++    ++HNH+L
Sbjct: 82  -------QLNSRTGCPAFIRVQRRDTGKWVLDQIQKEHNHDL 116


>At1g52520 F6D8.26
          Length = 703

 Score =  149 bits (375), Expect = 3e-36
 Identities = 108/359 (30%), Positives = 166/359 (46%), Gaps = 30/359 (8%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKDGSVSSCRFVCCKEGMRKPDKRD 66
           P V M F S  +A+ ++N Y  + GF VR   +  K+         +CC     +  KR 
Sbjct: 85  PAVGMEFESYDDAYNYYNCYASEVGFRVRVKNSWFKRRSKEKYGAVLCCSS---QGFKRI 141

Query: 67  YKTKNPRLETRTNCEARLGLKNVDGKLM-VHDFVEDHNHELLLPETTHMLSSQRKVSEIH 125
                 R ETRT C A + ++ VD K   V +   DHNH LL  +    +  +RK     
Sbjct: 142 NDVNRVRKETRTGCPAMIRMRQVDSKRWRVVEVTLDHNH-LLGCKLYKSVKRKRK----- 195

Query: 126 CQQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERS--------LVQ 177
           C    ++D+  +   K +     + G   N         + L KK + S        L +
Sbjct: 196 CVSSPVSDAKTI---KLYRACVVDNGSNVN-------PNSTLNKKFQNSTGSPDLLNLKR 245

Query: 178 GEAGYLLQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYC 237
           G++  +  YF R  + NP F++   ++ E Q+ NVFWADA   V  SYFGDV+ +DS+Y 
Sbjct: 246 GDSAAIYNYFCRMQLTNPNFFYLMDVNDEGQLRNVFWADAFSKVSCSYFGDVIFIDSSYI 305

Query: 238 TNSSHRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQA 297
           +     PL   +G NHH    +     L  ET ESY WL + +L   K + PQT+ TD+ 
Sbjct: 306 SGKFEIPLVTFTGVNHHGKTTLLSCGFLAGETMESYHWLLKVWLSVMK-RSPQTIVTDRC 364

Query: 298 KSMAKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
           K +  A+++V P ++      H+M+   + LG L   ++     F K +Y    V +FE
Sbjct: 365 KPLEAAISQVFPRSHQRFSLTHIMRKIPEKLGGLHNYDA-VRKAFTKAVYETLKVVEFE 422


>At1g80010 hypothetical protein
          Length = 696

 Score =  142 bits (359), Expect = 2e-34
 Identities = 104/360 (28%), Positives = 171/360 (46%), Gaps = 17/360 (4%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKDGSVSSCRFVCCK-EGMRKPDKR 65
           P   M F S  +A+ F+N+Y  + GF +R   +  K++        +CC  +G +    +
Sbjct: 66  PTPGMEFESYDDAYSFYNSYARELGFAIRVKSSWTKRNSKEKRGAVLCCNCQGFKL--LK 123

Query: 66  DYKTKNPRLETRTNCEARLGLKNVDGKLMVHDFVE-DHNHELLLPETTHMLSSQRKVSEI 124
           D  ++  R ETRT C+A + L+ +       D V+ DHNH    P+  H   S +K S  
Sbjct: 124 DAHSR--RKETRTGCQAMIRLRLIHFDRWKVDQVKLDHNHSFD-PQRAHNSKSHKKSSSS 180

Query: 125 HCQQI----ELADSVGVQQKKSFDLLSKE----VGGRTNLGFIRLDQKNYLRKKRERSLV 176
                    E    V V+  K +  L+ +    +G   + G       ++ +  R   L 
Sbjct: 181 ASPATKTNPEPPPHVQVRTIKLYRTLALDTPPALGTSLSSGETSDLSLDHFQSSRRLEL- 239

Query: 177 QGEAGYLLQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTY 236
           +G    L  +F +  + +P F +   L  +  + NVFW DAR    YS+FGDV+  D+T 
Sbjct: 240 RGGFRALQDFFFQIQLSSPNFLYLMDLADDGSLRNVFWIDARARAAYSHFGDVLLFDTTC 299

Query: 237 CTNSSHRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQ 296
            +N+   PL    G NHH   ++ G  LL D++ E+Y WLF  +L     + PQ   T+Q
Sbjct: 300 LSNAYELPLVAFVGINHHGDTILLGCGLLADQSFETYVWLFRAWLTCMLGRPPQIFITEQ 359

Query: 297 AKSMAKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
            K+M  A++EV P A+H L   H++ N  + +  L   + + ++   + +YG   VE+FE
Sbjct: 360 CKAMRTAVSEVFPRAHHRLSLTHVLHNICQSVVQLQDSDLFPMA-LNRVVYGCLKVEEFE 418


>At2g32250 Mutator-like transposase
          Length = 684

 Score =  139 bits (351), Expect = 2e-33
 Identities = 98/349 (28%), Positives = 158/349 (45%), Gaps = 47/349 (13%)

Query: 11  MFFCSLKNAWEFWNTYXGKXGFGVRKDYTHR-KKDGSVSSCRFVCCKEGMRKPDKRDYKT 69
           M F S + A+ F+  Y    GFG+    + R K+ G     +  C + G     KR+  T
Sbjct: 42  MDFESKEAAYYFYREYARSVGFGITIKASRRSKRSGKFIDVKIACSRFGT----KREKAT 97

Query: 70  K-NPRLETRTNCEARLGLKNV-DGKLMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHCQ 127
             NPR   +T C+A L +K   D K ++++FV++HNHE+  P+  +              
Sbjct: 98  AINPRSCPKTGCKAGLHMKRKEDEKWVIYNFVKEHNHEIC-PDDFY-------------- 142

Query: 128 QIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSLVQGEAGYLLQYF 187
                  V V+ K      +K  G               ++K  + +L + +   LL++F
Sbjct: 143 -------VSVRGK------NKPAGALA------------IKKGLQLALEEEDLKLLLEHF 177

Query: 188 QRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLAI 247
                + P F++A   D + ++ NVFW DA+   DY  F DVV  D+ Y  N    P A 
Sbjct: 178 MEMQDKQPGFFYAVDFDSDKRVRNVFWLDAKAKHDYCSFSDVVLFDTFYVRNGYRIPFAP 237

Query: 248 ISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAEV 307
             G +HHR  V+ G AL+ + +  +Y WLF T+L+A   + P  + TDQ K ++  + EV
Sbjct: 238 FIGVSHHRQYVLLGCALIGEVSESTYSWLFRTWLKAVGGQAPGVMITDQDKLLSDIVVEV 297

Query: 308 MPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
            P+  H  C W ++    + L   +  +  F+  F  C+      E FE
Sbjct: 298 FPDVRHIFCLWSVLSKISEMLNPFVSQDDGFMESFGNCVASSWTDEHFE 346


>At1g10240 unknown protein
          Length = 680

 Score =  139 bits (350), Expect = 2e-33
 Identities = 101/360 (28%), Positives = 161/360 (44%), Gaps = 13/360 (3%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKD-GSVSSCRFVCCKEGMRKPDKR 65
           P +   F +   A+EF++T+  + GF +R+  T  K   G   + R+  C      P K 
Sbjct: 48  PYLGQIFLTHDTAYEFYSTFAKRCGFSIRRHRTEGKDGVGKGLTRRYFVCHRAGNTPIKT 107

Query: 66  --DYKTKNPRLETRTNCEARLGLKNV----DGKLMVHDFVEDHNHELLLPETTHMLSSQR 119
             + K +  R  +R  C+A L +  +      +  V  F   HNHELL P     L + R
Sbjct: 108 LSEGKPQRNRRSSRCGCQAYLRISKLTELGSTEWRVTGFANHHNHELLEPNQVRFLPAYR 167

Query: 120 KVSEIHCQQIELADSVGVQQKKSFDLLSKEVGGRTN-LGFIRLDQKNYLRKKRERSLVQG 178
            +S+    +I +    G+  ++   LL  E       L F   D +N L+  ++    + 
Sbjct: 168 SISDADKSRILMFSKTGISVQQMMRLLELEKCVEPGFLPFTEKDVRNLLQSFKKLD-PED 226

Query: 179 EAGYLLQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCT 238
           E    L+  Q    ++P F   + LD  D++ N+ W+ A  +  Y  FGD V  D+T+  
Sbjct: 227 ENIDFLRMCQSIKEKDPNFKFEFTLDANDKLENIAWSYASSIQSYELFGDAVVFDTTHRL 286

Query: 239 NSSHRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAK 298
           ++   PL I  G N++     FG  LL DE   S+ W  + F      K PQT+ TD   
Sbjct: 287 SAVEMPLGIWVGVNNYGVPCFFGCVLLRDENLRSWSWALQAFTGFMNGKAPQTILTDHNM 346

Query: 299 SMAKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESY--FLSDFEKCMYGYEDVEQFE 356
            + +A+A  MP   H LC W ++        N   GE Y  + ++F + +Y  E VE+FE
Sbjct: 347 CLKEAIAGEMPATKHALCIW-MVVGKFPSWFNAGLGERYNDWKAEFYR-LYHLESVEEFE 404


>At5g28530 far-red impaired response protein (FAR1) - like
          Length = 700

 Score =  127 bits (319), Expect = 9e-30
 Identities = 90/334 (26%), Positives = 154/334 (45%), Gaps = 19/334 (5%)

Query: 5   WNPKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKKDGSVSSCRFVCCKEGMRKPDK 64
           + P V   F +   A+E+++T+  K GF +RK  +   ++  V    FVC + G  +P K
Sbjct: 68  FTPYVGQIFTTDDEAFEYYSTFARKSGFSIRKARSTESQNLGVYRRDFVCYRSGFNQPRK 127

Query: 65  R-DYKTKNPRLETRTNCEARLGLKN--VDG--KLMVHDFVEDHNHELLLPETTHMLSSQR 119
           + + +    R   R  C+ +L L    VDG     V  F   HNHELL  +   +L + R
Sbjct: 128 KANVEHPRERKSVRCGCDGKLYLTKEVVDGVSHWYVSQFSNVHNHELLEDDQVRLLPAYR 187

Query: 120 KVSEIHCQQIELADSVGVQQKKSFDLLSKEVGGRTN-LGFIRLDQKNYLRKKRERSLVQG 178
           K+ +   ++I L    G    +   LL  E G  +  L FI  D +N++R  ++   VQ 
Sbjct: 188 KIQQSDQERILLLSKAGFPVNRIVKLLELEKGVVSGQLPFIEKDVRNFVRACKKS--VQE 245

Query: 179 EAGYLLQYFQRKTVE-----------NPTFYHAYQLDIEDQITNVFWADARMLVDYSYFG 227
              ++ +  +  T+E           +  F +    D   ++ N+ WA    +  YS FG
Sbjct: 246 NDAFMTEKRESDTLELLECCKGLAERDMDFVYDCTSDENQKVENIAWAYGDSVRGYSLFG 305

Query: 228 DVVSLDSTYCTNSSHRPLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQK 287
           DVV  D++Y +      L +  G +++  A++ G  LL DE+  S+ W  +TF+   + +
Sbjct: 306 DVVVFDTSYRSVPYGLLLGVFFGIDNNGKAMLLGCVLLQDESCRSFTWALQTFVRFMRGR 365

Query: 288 MPQTVFTDQAKSMAKALAEVMPEAYHGLCTWHLM 321
            PQT+ TD    +  A+   MP   H +   H++
Sbjct: 366 HPQTILTDIDTGLKDAIGREMPNTNHVVFMSHIV 399


>At4g19990 putative protein
          Length = 672

 Score =  118 bits (296), Expect = 4e-27
 Identities = 91/362 (25%), Positives = 155/362 (42%), Gaps = 72/362 (19%)

Query: 13  FCSLKNAWEFWNTYXGKXGFG-VRKDYTHRKKDGSVSSCRFVCCKEGMRKPD-------- 63
           F S + A+EF+  Y    GF  + K     +  G     +FVC + G +K D        
Sbjct: 27  FESKEEAFEFYKEYANSVGFTTIIKASRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTD 86

Query: 64  -----KRDYKTKNPRLETRTNCEARLGLKN-VDGKLMVHDFVEDHNHELLLPETTHM--L 115
                +   + +  R  ++T+C+A L +K   DG+ +V   V++HNHE+   +   +  L
Sbjct: 87  GFNIPQARKRGRINRSSSKTDCKAFLHVKRRQDGRWVVRSLVKEHNHEIFTGQADSLREL 146

Query: 116 SSQRKVSEIHCQQIELADSVGVQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSL 175
           S +RK+ +++                    + KEV                    + R L
Sbjct: 147 SGRRKLEKLN------------------GAIVKEV--------------------KSRKL 168

Query: 176 VQGEAGYLLQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDST 235
             G+   LL +F                D++  + N+FW DA+   DY+ F DVVS+D+T
Sbjct: 169 EDGDVERLLNFFT---------------DMQS-LRNIFWVDAKGRFDYTCFSDVVSIDTT 212

Query: 236 YCTNSSHRPLAIISGFNHHRGAVIFG-AALLYDETAESYEWLFETFLEAHKQKMPQTVFT 294
           +  N    PL   +G NHH   ++ G   LL DE+   + WLF  +L+A     P+ + T
Sbjct: 213 FIKNEYKLPLVAFTGVNHHGQFLLLGFGLLLTDESKSGFVWLFRAWLKAMHGCRPRVILT 272

Query: 295 DQAKSMAKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQ 354
              + + +A+ EV P + H    W  +    + LG++++ E   + +    +YG    E 
Sbjct: 273 KHDQMLKEAVLEVFPSSRHCFYMWDTLGQMPEKLGHVIRLEKKLVDEINDAIYGSCQSED 332

Query: 355 FE 356
           FE
Sbjct: 333 FE 334


>At4g38170 hypothetical protein
          Length = 531

 Score =  106 bits (264), Expect = 2e-23
 Identities = 56/176 (31%), Positives = 95/176 (53%), Gaps = 5/176 (2%)

Query: 182 YLLQYFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSS 241
           ++L Y +R+ +ENP F +A    IED   NVFWAD    ++Y+YFGD +  D+TY     
Sbjct: 6   HVLNYLKRRQLENPGFLYA----IEDDCGNVFWADPTCRLNYTYFGDTLVFDTTYRRGKR 61

Query: 242 HR-PLAIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSM 300
           ++ P A  +GFNHH   V+FG AL+ +E+  S+ WLF+T+L+A     P ++  +  + +
Sbjct: 62  YQVPFAAFTGFNHHGQPVLFGCALILNESESSFAWLFQTWLQAMSAPPPPSITVEPDRLI 121

Query: 301 AKALAEVMPEAYHGLCTWHLMQNGIKHLGNLMKGESYFLSDFEKCMYGYEDVEQFE 356
             A++ V  +         + +   + L ++ +    F S+F  C+   E   +FE
Sbjct: 122 QVAVSRVFSQTRLRFSQPLIFEETEEKLAHVFQAHPTFESEFINCVTETETAAEFE 177


>At3g47280 putative protein
          Length = 739

 Score = 66.6 bits (161), Expect = 2e-11
 Identities = 56/247 (22%), Positives = 100/247 (39%), Gaps = 5/247 (2%)

Query: 79  NCEARLGLKNVDGK--LMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHCQQIELADSVG 136
           NC  RL      G    ++  +V  H+ +  L   +H  +S R +  +     E    + 
Sbjct: 216 NCSWRLRATRAGGSESYVIRKYVSHHSCDSSLRNVSHRQASARTLGRLISNHFE-GGKLP 274

Query: 137 VQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSLVQGEAGYLLQYFQRKTVENPT 196
           ++ K+  ++  K+ G   N       QK+    +  R L       L ++F R  V NP 
Sbjct: 275 LRPKQLIEIFRKDHGVGINYSKAWRVQKH--AAELARGLPDDSFEVLPRWFHRVQVTNPG 332

Query: 197 FYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLAIISGFNHHRG 256
               ++ D  ++    F A    +  Y     V+S+D  + T+     L   S  + +  
Sbjct: 333 SITFFKKDSANKFKYAFLAFGASIRGYKLMRKVISIDGAHLTSKFKGTLLGASAQDGNFN 392

Query: 257 AVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAEVMPEAYHGLC 316
                 A++  E   S++W  +  L     +      +D+A S+A  L+   P A+HGLC
Sbjct: 393 LYPIAFAIVDSENDASWDWFLKCLLNIIPDENDLVFVSDRAASIASRLSGNYPLAHHGLC 452

Query: 317 TWHLMQN 323
           T+HL +N
Sbjct: 453 TFHLQKN 459


>At5g34890 putative protein
          Length = 681

 Score = 65.5 bits (158), Expect = 4e-11
 Identities = 57/257 (22%), Positives = 103/257 (39%), Gaps = 5/257 (1%)

Query: 79  NCEARLGLKNVDGK--LMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHCQQIELADSVG 136
           NC  RL      G    ++  +V  H+ +  L   +H  +S R +  +     E    + 
Sbjct: 199 NCSWRLRATRAGGSESYVIRKYVSHHSCDSSLRNVSHRQASARTLGRLISNHFE-GGKLP 257

Query: 137 VQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSLVQGEAGYLLQYFQRKTVENPT 196
           +  K+  ++  K+ G   N       Q++    +  R L       L ++F R  V NP 
Sbjct: 258 LIPKQLIEIFRKDHGVGINYSKAWRVQEH--AAELARGLRDDSFEVLPRWFHRVQVTNPG 315

Query: 197 FYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLAIISGFNHHRG 256
               ++ D  ++    F A    +  Y     V+S+D  + T+     L   S  + +  
Sbjct: 316 SITFFKKDSANKFKYAFLAFGASIRGYKLMRKVISIDGAHLTSKFKGTLLGASAQDGNFN 375

Query: 257 AVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAEVMPEAYHGLC 316
                 A++  E   S++W  +  L     +      +D+A S+A  L+   P A+HGLC
Sbjct: 376 LYPIAFAIVDSENDASWDWFLKCLLNITPDENDLVFVSDRAASIASGLSGNYPLAHHGLC 435

Query: 317 TWHLMQNGIKHLGNLMK 333
           T+HL +N   H  ++ K
Sbjct: 436 TFHLQKNLETHFRDVRK 452


>At3g59470 unknown protein
          Length = 251

 Score = 65.1 bits (157), Expect = 6e-11
 Identities = 42/103 (40%), Positives = 54/103 (51%), Gaps = 3/103 (2%)

Query: 7   PKVDMFFCSLKNAWEFWNTYXGKXGFGVRKDYTHRKK-DGSVSSCRFVCCKEGMRKPDKR 65
           P V   F S   A  F+N Y  K GF +R     R + DGS    + VC KEG R P KR
Sbjct: 70  PYVGQEFESEAAAHGFYNAYATKVGFVIRVSKLSRSRHDGSPIGRQLVCNKEGYRLPSKR 129

Query: 66  DYKTKNPRLETRTNCEARLGL-KNVDGKLMVHDFVEDHNHELL 107
           D K    R ETR  C+A + + K   GK ++  FV++HNH L+
Sbjct: 130 D-KVIRQRAETRVGCKAMILIRKENSGKWVITKFVKEHNHSLM 171


>At2g15150 putative transposase of FARE2.2 (CDS1)
          Length = 607

 Score = 63.2 bits (152), Expect = 2e-10
 Identities = 54/247 (21%), Positives = 99/247 (39%), Gaps = 5/247 (2%)

Query: 79  NCEARLGLKNVDGK--LMVHDFVEDHNHELLLPETTHMLSSQRKVSEIHCQQIELADSVG 136
           NC  RL      G     +  +V  H+ +  L   +H  +S R +  +     E    + 
Sbjct: 93  NCSWRLRATRAGGSESYAIRKYVSHHSCDSSLRNVSHRQASARTLGRLISNHFE-GGKLP 151

Query: 137 VQQKKSFDLLSKEVGGRTNLGFIRLDQKNYLRKKRERSLVQGEAGYLLQYFQRKTVENPT 196
           ++ K+  ++  K+ G   N       Q++    +  R L       L ++F R  V NP 
Sbjct: 152 LRPKQLIEIFRKDHGVGINYSKAWRVQEH--AAELARGLPDDSFEVLPRWFHRVQVTNPG 209

Query: 197 FYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPLAIISGFNHHRG 256
               ++ D  ++    F A    +  Y     V+S+D  + T+     L   S  + +  
Sbjct: 210 SITFFKKDSANKFKYAFLAFGASIRGYKLMRKVISIDGAHLTSKFKGTLLGASAQDGNFN 269

Query: 257 AVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALAEVMPEAYHGLC 316
                 A++  E   S++W  +  L     +      +++A S+A  L+   P A+HGLC
Sbjct: 270 LYPIAFAIVDSENDASWDWFLKCLLNIIPDENDLVFVSERAASIASGLSGNYPLAHHGLC 329

Query: 317 TWHLMQN 323
           T+HL +N
Sbjct: 330 TFHLQKN 336


>At3g32060 hypothetical protein
          Length = 487

 Score = 61.6 bits (148), Expect = 6e-10
 Identities = 45/175 (25%), Positives = 70/175 (39%), Gaps = 12/175 (6%)

Query: 186 YFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPL 245
           Y  +K  +    Y   +LD  D+   VF A    +  +     V+ +D+T+  N     L
Sbjct: 225 YMLKKVNDGTVTY--LKLDENDKFQYVFVALGASIEGFRVMRKVLIVDATHLKNGYGGVL 282

Query: 246 AIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALA 305
              S  + +R   I   A+L  E   S+EW FE               TD+  S+ KA+ 
Sbjct: 283 VFASAQDPNRHHYIIAFAVLDGENDASWEWFFEKLKTVVPDTSELVFMTDRNASLIKAIR 342

Query: 306 EVMPEAYHGLCTWHLMQNGIKHLGNLMK----------GESYFLSDFEKCMYGYE 350
            V   A+HG C WHL QN   H  +  +             Y ++DF +   G++
Sbjct: 343 NVYTAAHHGYCIWHLSQNVKGHATHTNRDVLAWKFQELSRVYVVADFNRAYDGFK 397


>At2g23500 Mutator-like transposase
          Length = 784

 Score = 61.6 bits (148), Expect = 6e-10
 Identities = 45/175 (25%), Positives = 70/175 (39%), Gaps = 12/175 (6%)

Query: 186 YFQRKTVENPTFYHAYQLDIEDQITNVFWADARMLVDYSYFGDVVSLDSTYCTNSSHRPL 245
           Y  +K  +    Y   +LD  D+   VF A    +  +     V+ +D+T+  N     L
Sbjct: 355 YMLKKVNDGTVTY--LKLDENDKFQYVFVALGASIEGFRVMRKVLIVDATHLKNGYGGVL 412

Query: 246 AIISGFNHHRGAVIFGAALLYDETAESYEWLFETFLEAHKQKMPQTVFTDQAKSMAKALA 305
              S  + +R   I   A+L  E   S+EW FE               TD+  S+ KA+ 
Sbjct: 413 VFASAQDPNRHHYIIAFAVLDGENDASWEWFFEKLKTVVPDTSELVFMTDRNASLIKAIR 472

Query: 306 EVMPEAYHGLCTWHLMQNGIKHLGNLMK----------GESYFLSDFEKCMYGYE 350
            V   A+HG C WHL QN   H  +  +             Y ++DF +   G++
Sbjct: 473 NVYTAAHHGYCIWHLSQNVKGHATHTNRDVLAWKFQELSRVYVVADFNRAYDGFK 527


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.136    0.418 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,355,889
Number of Sequences: 26719
Number of extensions: 344731
Number of successful extensions: 953
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 65
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 834
Number of HSP's gapped (non-prelim): 94
length of query: 362
length of database: 11,318,596
effective HSP length: 101
effective length of query: 261
effective length of database: 8,619,977
effective search space: 2249813997
effective search space used: 2249813997
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)