BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC148098.6 - phase: 0
(556 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g13210 calcium-transporting ATPase like protein 47 4e-05
At1g68710 ATPase, putative 45 8e-05
At5g48880 peroxisomal-3-keto-acyl-CoA thiolase 1 (PKT1) 45 1e-04
At3g27870 P-type ATPase, putative 45 1e-04
At1g26130 P-type transporting ATPase like protein 44 2e-04
At2g33150 3-ketoacyl-CoA thiolase 44 3e-04
At1g04710 acetyl-CoA acyltransferase like protein 44 3e-04
At3g25610 ATPase II, putative 43 4e-04
At1g72700 putative P-type transporting ATPase 43 5e-04
At1g53345 unknown protein 42 0.001
At1g17500 P-type ATPase, putative 42 0.001
At3g13900 putative ATPase 41 0.002
At1g54280 hypothetical protein 40 0.003
At1g59820 hypothetical protein 37 0.022
At5g04930 ATPase 31 1.6
At1g29010 hypothetical protein 29 6.0
>At1g13210 calcium-transporting ATPase like protein
Length = 1203
Score = 46.6 bits (109), Expect = 4e-05
Identities = 38/130 (29%), Positives = 57/130 (43%), Gaps = 12/130 (9%)
Query: 76 DQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQIIFLKE------VE 129
D+ K WV T D MET +NIG CSLL M III TP I L++ +E
Sbjct: 716 DKLAQAGIKIWVLTGDKMETAINIGFACSLLRQEMKQIIINLETPHIKALEKAGEKDAIE 775
Query: 130 DMSTAANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSLESFYEILDRLPI 189
S + + M+ + S ++FA++ + G + +LE ++ L +
Sbjct: 776 HASRESVVNQMEEGKALLTASSSASSHEAFALI-----IDGKSLTYALEDDFK-KKFLDL 829
Query: 190 LFNCVSAPCC 199
C S CC
Sbjct: 830 ATGCASVICC 839
>At1g68710 ATPase, putative
Length = 1200
Score = 45.4 bits (106), Expect = 8e-05
Identities = 25/60 (41%), Positives = 31/60 (51%)
Query: 76 DQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQIIFLKEVEDMSTAA 135
D+ K WV T D MET +NIG CSLL M III TP+I L++ + A
Sbjct: 724 DKLAQAGIKIWVLTGDKMETAINIGFACSLLRQDMKQIIINLETPEIQSLEKTGEKDVIA 783
>At5g48880 peroxisomal-3-keto-acyl-CoA thiolase 1 (PKT1)
Length = 414
Score = 44.7 bits (104), Expect = 1e-04
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 134 AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
A + LM+R + + +G PIL +F+SFA+ GV +VMG+GP+ ++
Sbjct: 256 AGAVLLMKRSLAMKKGLPILGVFRSFAVTGVEPSVMGIGPAVAI 299
>At3g27870 P-type ATPase, putative
Length = 1174
Score = 44.7 bits (104), Expect = 1e-04
Identities = 32/114 (28%), Positives = 49/114 (42%)
Query: 84 KPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQIIFLKEVEDMSTAANMCLMQRR 143
K WV T D ET +NIG CSLL GM I++ + I L++ D A + +
Sbjct: 714 KIWVLTGDKTETAINIGYACSLLREGMKQILVTLDSSDIEALEKQGDKEAVAKLREGMSQ 773
Query: 144 MTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSLESFYEILDRLPILFNCVSAP 197
+ E + F +V ++ SK + F E+ R + C S+P
Sbjct: 774 TAAVTDNSAKENSEMFGLVIDGKSLTYALDSKLEKEFLELAIRCNSVICCRSSP 827
>At1g26130 P-type transporting ATPase like protein
Length = 1184
Score = 44.3 bits (103), Expect = 2e-04
Identities = 26/57 (45%), Positives = 31/57 (53%), Gaps = 5/57 (8%)
Query: 66 IPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQI 122
+P ++KLA K WV T D MET +NIG CSLL M III TP+I
Sbjct: 714 VPDCINKLAQ-----AGIKIWVLTGDKMETAINIGFACSLLRRDMKQIIINLETPEI 765
>At2g33150 3-ketoacyl-CoA thiolase
Length = 462
Score = 43.5 bits (101), Expect = 3e-04
Identities = 18/44 (40%), Positives = 32/44 (71%)
Query: 134 AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
A + LM+R + + +G P+L +F++FA VGV A+MG+GP+ ++
Sbjct: 298 AGAVLLMKRSVAMQKGLPVLGVFRTFAAVGVDPAIMGIGPAVAI 341
>At1g04710 acetyl-CoA acyltransferase like protein
Length = 443
Score = 43.5 bits (101), Expect = 3e-04
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 134 AANMCLMQRRMTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSL 177
A + LM+R + + +G PIL +F++F+ VGV A+MGVGP+ ++
Sbjct: 290 AGAVLLMRRNVAMQKGLPILGVFRTFSAVGVDPAIMGVGPAVAI 333
>At3g25610 ATPase II, putative
Length = 1202
Score = 43.1 bits (100), Expect = 4e-04
Identities = 45/142 (31%), Positives = 58/142 (40%), Gaps = 23/142 (16%)
Query: 66 IPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQIIFL 125
+P + KLA K WV T D MET +NIG SLL M III TPQI
Sbjct: 712 VPECIDKLAQ-----AGIKIWVLTGDKMETAINIGFASSLLRQEMKQIIINLETPQI--- 763
Query: 126 KEVEDMSTAANMCLMQRR---MTIDRGSPILEMFKSFAIVGVAHAVMGVGPSKSLESFYE 182
K +E + L R M + G +L A + A + KSL Y
Sbjct: 764 KSLEKSGGKDEIELASRESVVMQLQEGKALLA-----ASGASSEAFALIIDGKSLT--YA 816
Query: 183 ILDRLPILF-----NCVSAPCC 199
+ D + +F +C S CC
Sbjct: 817 LEDEIKKMFLDLATSCASVICC 838
>At1g72700 putative P-type transporting ATPase
Length = 1228
Score = 42.7 bits (99), Expect = 5e-04
Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 5/52 (9%)
Query: 66 IPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICS 117
+P + KLA K WV T D MET +NIG CSLL GM I I S
Sbjct: 733 VPQCIDKLAQ-----AGLKLWVLTGDKMETAINIGFACSLLRQGMRQICITS 779
>At1g53345 unknown protein
Length = 325
Score = 41.6 bits (96), Expect = 0.001
Identities = 30/99 (30%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 3 SLSHKQTLIDDCVSLSYEIAV-GTAFYCHCLKVLVGTALLDLKGALTHQLVTQIWKVQLR 61
SLS K LI + + SYEI + G + CL V + +L+ L +QL + + LR
Sbjct: 206 SLSKKHKLIHEVLEQSYEIVLGGDEEFGRCLAV-NADEITELRSELGNQLAEKSKNLSLR 264
Query: 62 CIGSIPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIG 100
+G++ Y+V +L ++ +L +S + V DT + G
Sbjct: 265 GVGAVVYRVPELGDENKLKISLRS-VAEEDTTPVSQRFG 302
>At1g17500 P-type ATPase, putative
Length = 1218
Score = 41.6 bits (96), Expect = 0.001
Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 5/50 (10%)
Query: 66 IPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIII 115
+P + KLA K WV T D MET +NIG +CSLL GM I I
Sbjct: 722 VPQCIDKLAQ-----AGLKLWVLTGDKMETAINIGYSCSLLRQGMKQICI 766
>At3g13900 putative ATPase
Length = 1243
Score = 41.2 bits (95), Expect = 0.002
Identities = 23/50 (46%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 66 IPYKVSKLANDQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYIII 115
+P + KLA K WV T D MET +NIG CSLL GM I I
Sbjct: 740 VPQCIDKLAQ-----AGLKIWVLTGDKMETAINIGYACSLLRQGMKQIYI 784
>At1g54280 hypothetical protein
Length = 1240
Score = 40.4 bits (93), Expect = 0.003
Identities = 20/35 (57%), Positives = 21/35 (59%)
Query: 84 KPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICST 118
K WV T D MET +NIG CSLL GM I I T
Sbjct: 755 KIWVLTGDKMETAINIGYACSLLRQGMKQISISLT 789
>At1g59820 hypothetical protein
Length = 1213
Score = 37.4 bits (85), Expect = 0.022
Identities = 29/117 (24%), Positives = 48/117 (40%), Gaps = 2/117 (1%)
Query: 84 KPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTTPQIIFLKEVEDMSTAANMCLMQRR 143
K WV T D MET +NI C+L+ M +I S T I +E D A + + +
Sbjct: 703 KIWVLTGDKMETAINIAYACNLINNEMKQFVISSETDAIREAEERGDQVEIARVIKEEVK 762
Query: 144 MTIDRG-SPILEMFKSFAIVGVAHAVMGVGPSKSLESFYEILDRLPILFNCVSAPCC 199
+ + + A ++ + G +L+ ++ L + NC S CC
Sbjct: 763 RELKKSLEEAQHSLHTVAGPKLSLVIDGKCLMYALDPSLRVM-LLSLSLNCTSVVCC 818
>At5g04930 ATPase
Length = 1158
Score = 31.2 bits (69), Expect = 1.6
Identities = 15/36 (41%), Positives = 20/36 (54%)
Query: 84 KPWVFTSDTMETTLNIGSTCSLLGPGMHYIIICSTT 119
K WV T D ET ++IG + LL M I+I S +
Sbjct: 739 KVWVLTGDKQETAISIGFSSRLLTRNMRQIVINSNS 774
>At1g29010 hypothetical protein
Length = 220
Score = 29.3 bits (64), Expect = 6.0
Identities = 12/45 (26%), Positives = 26/45 (57%)
Query: 70 VSKLANDQQLNMSSKPWVFTSDTMETTLNIGSTCSLLGPGMHYII 114
V+K ++++++ + +PW F +DT + ++ +T S P II
Sbjct: 148 VTKFLDEEKISSAKRPWHFMADTAKCSVGPSTTISSFLPANDQII 192
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.326 0.137 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,873,657
Number of Sequences: 26719
Number of extensions: 474806
Number of successful extensions: 1379
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1363
Number of HSP's gapped (non-prelim): 17
length of query: 556
length of database: 11,318,596
effective HSP length: 104
effective length of query: 452
effective length of database: 8,539,820
effective search space: 3859998640
effective search space used: 3859998640
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 63 (28.9 bits)
Medicago: description of AC148098.6