BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147714.8 + phase: 0 /pseudo
(2334 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g14380 putative retroelement pol polyprotein 80 2e-14
At4g03800 79 3e-14
At2g13330 F14O4.9 74 8e-13
At4g04050 putative transposon protein 72 3e-12
At1g20390 hypothetical protein 72 5e-12
At4g20490 putative protein 68 7e-11
At1g34080 putative protein 65 4e-10
At2g10670 pseudogene 54 1e-06
At4g03770 hypothetical protein 52 5e-06
At2g15100 putative retroelement pol polyprotein 49 5e-05
At3g31520 hypothetical protein 47 1e-04
At1g37180 hypothetical protein 47 1e-04
At2g14400 putative retroelement pol polyprotein 45 4e-04
At3g31530 hypothetical protein 44 0.001
At3g30655 hypothetical protein, 3' partial 43 0.002
At2g06160 putative Athila retroelement ORF1 protein 43 0.002
At1g37200 hypothetical protein 42 0.004
At4g08050 42 0.006
At3g32890 Athila ORF 1, putative 41 0.009
At2g07480 F9A16.15 41 0.009
>At2g14380 putative retroelement pol polyprotein
Length = 764
Score = 79.7 bits (195), Expect = 2e-14
Identities = 55/195 (28%), Positives = 86/195 (43%), Gaps = 27/195 (13%)
Query: 781 EQAYVDHEVTVDHFGSIVGNITAC---------------SNLW------------FSEDE 813
+Q + D V I+G +TAC + LW F+ ++
Sbjct: 277 DQQHNDAPVPRRRVNMIMGGLTACRDSFRSIKEYIKSGAATLWSSPATKEMTPLTFTSED 336
Query: 814 LPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRSTFLVK 873
L HN L I ++ ++ +L+DTGSS+NV+ K L ++ ++ S +
Sbjct: 337 LFGVDLPHNDPLVIELHIGESEVTRILIDTGSSVNVVFKDVLQKMKVHDRHIKPSVRPLT 396
Query: 874 AFNGTRKSVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKL 933
F+G G I LPI +G F V+D Y+ +LG PWIHD A+ S+ HQ +
Sbjct: 397 GFDGNTMMTNGTIKLPIYLGGAATWHKFVVVDKPTIYNIILGTPWIHDMQAIPSSYHQCI 456
Query: 934 KFAKSGKLVTIHGEE 948
K S + TI G +
Sbjct: 457 KIPTSIGIETIRGNQ 471
>At4g03800
Length = 637
Score = 79.0 bits (193), Expect = 3e-14
Identities = 51/144 (35%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 804 CSNLWFSEDELPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGT 863
CS++ F E+E + H+ AL I+++ + IS +LVDTGSS++++ + G
Sbjct: 182 CSSVSFDEEETRHIERPHDDALIITLDVANFKISRILVDTGSSVDLI---------FLGP 232
Query: 864 PLRRSTFLVKAFNGTRKSVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAG 923
P + AF LG I LP+ G + ++ F V D A+Y+ +LG PWI
Sbjct: 233 PSP-----LVAFTSESAMSLGTIKLPVLAGKMSKIVDFVVFDKPATYNIILGTPWIFQMK 287
Query: 924 AVTSTLHQKLKFAKSGKLVTIHGE 947
AV ST HQ LKF S + TI G+
Sbjct: 288 AVPSTYHQWLKFPTSNGVETIWGD 311
>At2g13330 F14O4.9
Length = 889
Score = 74.3 bits (181), Expect = 8e-13
Identities = 48/152 (31%), Positives = 75/152 (48%), Gaps = 6/152 (3%)
Query: 809 FSEDELPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRS 868
F E E+ + K H+ AL I ++ + +S ++VDTGSS++V+ + + + L+
Sbjct: 49 FWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSKLQGR 108
Query: 869 TFLVKAFNGTRKSVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTST 928
+ F G +G I LP L F V+D A ++ +LGRPW+H AV ST
Sbjct: 109 KTPLTGFAGDTTFSIGTIQLPTIARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKAVPST 168
Query: 929 LHQKLKFAKSGKLVTIHGEEAYLVSQLSSFSC 960
HQ +KF + ++G SQ SS C
Sbjct: 169 YHQCIKFPSYKGIAVVYG------SQRSSRKC 194
>At4g04050 putative transposon protein
Length = 681
Score = 72.4 bits (176), Expect = 3e-12
Identities = 42/141 (29%), Positives = 71/141 (49%)
Query: 809 FSEDELPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRS 868
F E E + K H+ AL I ++ + +S++++DTGSS++V+ ++ + + L+
Sbjct: 523 FWESETTDLNKPHDDALVIRIDVGNYELSHIMIDTGSSVDVLFYDAFKRMGHLDSELQGR 582
Query: 869 TFLVKAFNGTRKSVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTST 928
+ F G LG I LP L +F V++ A ++ +LGRPW+H AV ST
Sbjct: 583 KTPLTGFAGDTTFSLGTIQLPTIARGVRRLTSFLVVNKKAPFNAILGRPWLHAMKAVPST 642
Query: 929 LHQKLKFAKSGKLVTIHGEEA 949
HQ +KF + + A
Sbjct: 643 YHQCIKFPSDKGIAVVSAANA 663
>At1g20390 hypothetical protein
Length = 1791
Score = 71.6 bits (174), Expect = 5e-12
Identities = 46/176 (26%), Positives = 81/176 (45%), Gaps = 7/176 (3%)
Query: 809 FSEDELPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRS 868
F++ +L HN L + + ++ VL+DTGSS++++ K L ++ ++
Sbjct: 555 FTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPV 614
Query: 869 TFLVKAFNGTRKSVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTST 928
+ + F+G +G I LPI +G + F V+ A Y+ +LG PWIH A+ ST
Sbjct: 615 SKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIPST 674
Query: 929 LHQKLKFAKSGKLVTIHG-------EEAYLVSQLSSFSCIEAGSAEGTAFQGLTVE 977
HQ +KF + T+ +Y S+L + ++ T G+ E
Sbjct: 675 YHQCVKFPTHNGIFTLRAPKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAE 730
Score = 46.6 bits (109), Expect = 2e-04
Identities = 45/220 (20%), Positives = 92/220 (41%), Gaps = 5/220 (2%)
Query: 133 KTMEEMMEELAKELRHEIKANQGNADSFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQ 192
+T+ EM ++ + + ++ ++ +T ++ V + KI + YNG P+
Sbjct: 126 RTISEMSSKIHRATSTAPELDRVLEETQQTPFTRRITNVSIRGAQKIK-LESYNGRNDPK 184
Query: 193 NHIIKY---VRKMGNYKDN-DSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKS 248
+ + + + DN D+ F + L A W++ L N I +F +L ++F
Sbjct: 185 EFLTSFNVAINRAELTIDNFDAGRCQIFIEHLTGPAHNWFSRLKPNSIDSFHQLTSSFLK 244
Query: 249 HYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKGAAARITPALDEEEMTQTFLKTLKKD 308
HY I + + L S+S +ES R + R+K IT + +
Sbjct: 245 HYAPLIENQTSNADLWSISQGAKESLRSFVDRFKLVVTNITVPDEAAIVALRNAVWYDSR 304
Query: 309 YVERMIIAAPNNFSEMVTMGTRLEEAVREGIIVFEKAESS 348
+ + + + AP+ + + +R E E +I+ K S+
Sbjct: 305 FRDDITLHAPSTLEDALHRASRFIELEEEKLILARKHNST 344
>At4g20490 putative protein
Length = 853
Score = 67.8 bits (164), Expect = 7e-11
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 14/155 (9%)
Query: 809 FSEDELPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRS 868
F+ ++ HN AL I + + + +L+DTGSS+N+M TL ++ + +
Sbjct: 465 FTSEDASGIQHPHNDALVIKLVMEDFDVERILIDTGSSVNLMFLKTLFKMGISESKIMPK 524
Query: 869 TFLVKAFNGTRKSVLGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTST 928
+ ++G K +GEI L + +G T F V+D Y+ +LG PWI+ A+ ST
Sbjct: 525 IRPMTGYDGEAKMSIGEIKLQVQVGGITQKTKFVVIDSEPIYNAILGSPWIYSMKAIPST 584
Query: 929 --------------LHQKLKFAKSGKLVTIHGEEA 949
L + + AK G L+ I G A
Sbjct: 585 NLHTIRQPEGLTDMLRDREEAAKEGNLIAIKGRRA 619
>At1g34080 putative protein
Length = 811
Score = 65.5 bits (158), Expect = 4e-10
Identities = 37/112 (33%), Positives = 63/112 (56%)
Query: 824 ALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRSTFLVKAFNGTRKSVL 883
AL IS++ + + +L+DTGSS++++ TL ++ ++ + + +F L
Sbjct: 476 ALVISLDVGNCEVQRILIDTGSSVDLIFLDTLVRMGISKKDIKGAPSPLVSFTIETSMSL 535
Query: 884 GEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKF 935
G I LP+T +I F V D A+Y+ +LG PW+++ AV ST HQ +KF
Sbjct: 536 GTITLPVTAQGVVKMIEFTVFDRPAAYNIILGTPWLYEMKAVPSTYHQCVKF 587
>At2g10670 pseudogene
Length = 929
Score = 53.9 bits (128), Expect = 1e-06
Identities = 80/318 (25%), Positives = 119/318 (37%), Gaps = 66/318 (20%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ + R G K N D + F SL + A W +L KN I
Sbjct: 84 NKFHGLPMEDPLDHLDELERLCGLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPKNSI 143
Query: 237 HTFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKGAAARITPALDEEE 296
T+D+ AF + + N R R + + K+ ESF E +R+KG T
Sbjct: 144 TTWDDCKMAFLAKFFSNSRTARLRNEISGFTLKQNESFCEAWERFKGYQ---TKCPHHGF 200
Query: 297 MTQTFLKTLKKDYVE--RMIIAAPNNFSEMVTMGTRLEEAVREGIIVFEK-AESSVNASK 353
+ L TL + + RM++ +N G L++ + EG + E A+S N ++
Sbjct: 201 SQASLLNTLYRGVLPKIRMLLDTASN-------GNFLKKDIEEGWELVENLAQSGGNYNE 253
Query: 354 RYGNG----------HHKK----------------------KETEVGMVSAGAGQSMATV 381
YG HH++ E E V G A +
Sbjct: 254 DYGRSIYTSSNTDDKHHREMKALNDKLDKIIQMQQKHVHFISEDEPFQVQEGENDQCAEI 313
Query: 382 ---------APINAAQMPPSYPYVSYSQHPFFPP------FYHQYPLPPGQPQVPVYAIA 426
P AA P+ P+V Y+Q F P Y Q PPG A A
Sbjct: 314 RYVHNQGPSLPSAAAAAEPTKPFVPYNQSLGFVPKQQFQGGYQQQQPPPGFTPHQQQAHA 373
Query: 427 QQMKQQLPVQQQQQNQQA 444
Q + V QQ QA
Sbjct: 374 PQNSDIMTVLQQLIQGQA 391
Score = 33.1 bits (74), Expect = 2.0
Identities = 27/102 (26%), Positives = 49/102 (47%), Gaps = 9/102 (8%)
Query: 837 SNVLVDTGSSLNVMPKSTLDQLSYRGTPLRRSTFLVKAFNGTRKSVLGEI-DLPITIG-- 893
+N L D G+S+++MP S + +L + + + + T K+ G + D+P+ I
Sbjct: 589 NNCLCDLGASVSLMPLSVVKKLGF--VHYKPCDLTLILADRTSKTPFGLLEDVPVMINGV 646
Query: 894 --PETFLITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKL 933
P F++ MD + +LGRP++ GAV K+
Sbjct: 647 EVPTDFVVL--EMDGESKDPLILGRPFLASVGAVIDVKQGKI 686
>At4g03770 hypothetical protein
Length = 464
Score = 51.6 bits (122), Expect = 5e-06
Identities = 50/200 (25%), Positives = 84/200 (42%), Gaps = 21/200 (10%)
Query: 129 IPVTKTMEEMMEELAKELRHEIKANQGNAD-----SFKTQDLCLVSKVDV--PKKFKIPD 181
+ + K EM +L + H ++ N D S T ++S + P K +I
Sbjct: 181 LSLAKAENEM--KLVRSQMHNAVSSAPNIDRILEESHNTPFTHMISNAIISDPGKLRI-- 236
Query: 182 FDRYNGLTCPQNH----IIKYVRKMGNYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIH 237
+ +NG + P+ H II R ++ D+ + H F + L A W+T L N +
Sbjct: 237 -EYFNGSSDPKGHLKLFIISVARAKFRPEERDAGLCHLFVEHLKGPALNWFTRLKGNSVD 295
Query: 238 TFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKGAAARITPALDEEEM 297
+F EL+ F Y I + L SLS + E R++ +++ A++ D
Sbjct: 296 SFQELSTLFLKQYSVLIDPSTSDADLWSLSQQPNEPLRDFLAKFRSTLAKVEGIND---- 351
Query: 298 TQTFLKTLKKDYVERMIIAA 317
L TLKK R ++A
Sbjct: 352 -LAALSTLKKALCLRARLSA 370
>At2g15100 putative retroelement pol polyprotein
Length = 1329
Score = 48.5 bits (114), Expect = 5e-05
Identities = 34/110 (30%), Positives = 53/110 (47%), Gaps = 12/110 (10%)
Query: 845 SSLNVMPKSTLDQLSYRGTPLRR------STFLVKAFNGTRKSVLGEIDLPITIGPETFL 898
S+ N PK+ + + T LR+ +T L + LG + LP+T +
Sbjct: 314 SASNAAPKAPQPATTKKPTELRKPAAGTCTTMLCET-----SMSLGTVVLPVTAQGVVKM 368
Query: 899 ITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKF-AKSGKLVTIHGE 947
+ F V D A+Y+ +LG PW+++ V ST HQ +KF GK+ I E
Sbjct: 369 VEFTVFDRPAAYNVILGTPWLYEMKVVPSTYHQCVKFPTPVGKMTGISTE 418
>At3g31520 hypothetical protein
Length = 528
Score = 47.4 bits (111), Expect = 1e-04
Identities = 30/119 (25%), Positives = 56/119 (46%), Gaps = 7/119 (5%)
Query: 174 PKKFKIPDFDRYNGLTCPQNHIIKYVRKMGNYK----DNDSLMIHCFQDSLMEDAAEWYT 229
P K +I + +NG + P+ H+ ++ + K + D+ + H F + L A W++
Sbjct: 239 PGKLRI---EYFNGSSDPKRHLKSFIISVARTKFRPEERDAGLCHLFVEHLKGPALCWFS 295
Query: 230 SLSKNDIHTFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKGAAARI 288
L N + +F EL+ F Y I L + L SLS + E R++ + + A++
Sbjct: 296 RLEGNSMDSFQELSTLFLKQYSVLIDLGTSDADLWSLSQQPNEPLRDFLAKLRSTLAKV 354
>At1g37180 hypothetical protein
Length = 661
Score = 47.0 bits (110), Expect = 1e-04
Identities = 56/237 (23%), Positives = 97/237 (40%), Gaps = 26/237 (10%)
Query: 74 PSTAAGTSGTANNVLI--PATNVVSINATLPQTTA----AVTEPLVHTMPQSVNINTQHG 127
PS GT+ T N PA N T+ +T A+ P+ + +N++
Sbjct: 205 PSVEVGTTSTQNPTTSSSPAGFAAVSNETIARTLVPLDPAIRLPISDPRQEPSAVNSELQ 264
Query: 128 SIP----VTKTMEEMMEELAKELRHEIKANQGNADSFKTQDLCLVSKVDVP--KKFKIPD 181
S+ A E+ I+A + +T +SK+ + + FK+P
Sbjct: 265 SLQDQIWAMNAKVHQATTSAPEVEKVIEATR------RTPFTPRISKLRIREFRDFKLPV 318
Query: 182 FDRYNGLTCPQNHIIKY---VRKMG-NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIH 237
YNG P H+ + VR++ + D+ + F ++L A W+T L + I
Sbjct: 319 ---YNGKGDPNEHLTSFQVIVRRVPLEPYEEDAGLCKLFSENLSGPALTWFTQLEEGSID 375
Query: 238 TFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKGAAARITPALDE 294
F +L+ AF YG+ I+ L +LS ++ R Y +K +I P+L +
Sbjct: 376 NFKQLSTAFIKQYGYFIKSDITEAHLWNLSQSADDPLRTYIIVFKEIMVQI-PSLSD 431
>At2g14400 putative retroelement pol polyprotein
Length = 1466
Score = 45.4 bits (106), Expect = 4e-04
Identities = 49/206 (23%), Positives = 89/206 (42%), Gaps = 18/206 (8%)
Query: 100 TLPQTTAAVTEPLV-HTMPQSVN-INTQHG--SIPVTKTMEEMMEELAKELRHE-IKANQ 154
T P T A +P T P+ N QH + +TM+E+ EL KE+R + ++A
Sbjct: 70 TTPDGTNAENQPEDGETHPEDDNQFGDQHEQENFDQLETMKEVSREL-KEMRSKFLQATS 128
Query: 155 GNAD-------SFKTQDLCLVSKVDVPKKFKIPDFDRYNGLTCPQNHIIKYVRKMG---- 203
D + +T ++ + + K+ + + YNGL P+ ++ ++ G
Sbjct: 129 SEPDINRVIEKARQTPFTPQITSLRIRDSRKL-NLESYNGLEDPKGYLAAFLIAAGRVDL 187
Query: 204 NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFNIRLKPNREFL 263
N D D F ++L A W+T L I F+EL+ F Y + + L
Sbjct: 188 NEADEDVRYCKLFSENLCGQALMWFTQLEPGSISNFNELSVVFLKQYSILMDKSISDTDL 247
Query: 264 RSLS*KKEESFREYAQRWKGAAARIT 289
+LS E+ R + ++K ++++
Sbjct: 248 WNLSQGPNETLRAFITKFKYVLSKLS 273
Score = 39.3 bits (90), Expect = 0.027
Identities = 24/89 (26%), Positives = 49/89 (54%), Gaps = 4/89 (4%)
Query: 805 SNLWFSEDELPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKSTLDQLSYRGTP 864
+++ F E E + H+ AL ++++ + +S +L+DTGSS++++ STL+++
Sbjct: 407 TSILFDEKETQHLERSHDDALVVTLDVANFEVSRILIDTGSSVDLIFLSTLERMGISRAD 466
Query: 865 LRRSTFLVKAFNGTRKSVLGEIDLPITIG 893
+ R V+ K+V E+D + IG
Sbjct: 467 VNRRKLGVE----RAKAVNDEVDKLLKIG 491
>At3g31530 hypothetical protein
Length = 831
Score = 43.9 bits (102), Expect = 0.001
Identities = 23/66 (34%), Positives = 33/66 (49%)
Query: 883 LGEIDLPITIGPETFLITFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFAKSGKLV 942
LG I LP+ T ++ F + D Y+ ++G PW++ AV ST H LKF S +
Sbjct: 3 LGTIKLPVRAKGVTKIVDFSITDQPTVYNAIIGTPWLNQFRAVASTYHLCLKFPTSDSVW 62
Query: 943 TIHGEE 948
G E
Sbjct: 63 EKLGHE 68
>At3g30655 hypothetical protein, 3' partial
Length = 660
Score = 42.7 bits (99), Expect = 0.002
Identities = 31/107 (28%), Positives = 52/107 (47%), Gaps = 6/107 (5%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R G K N D + F SL + A W +L +N I
Sbjct: 52 NKFHGLPMEDPLDHLDEFERLYGLTKINGVSEDGFKLRLFPFSLGDKAHLWEKTLPQNSI 111
Query: 237 HTFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKG 283
+D+ AF + + N R R + + K+ ESF E +R+KG
Sbjct: 112 TAWDDCKKAFLAKFFSNSRTARLRNEISGFTQKQNESFGEAWERFKG 158
>At2g06160 putative Athila retroelement ORF1 protein
Length = 750
Score = 42.7 bits (99), Expect = 0.002
Identities = 58/264 (21%), Positives = 98/264 (36%), Gaps = 30/264 (11%)
Query: 204 NYKDNDSLMIHCFQDSLMEDAAEWYTSLSKNDIHTFDELAAAFKSHYGFNIRLKPNREFL 263
N D F SL + W +L +N I T+D+ AF + + N R R +
Sbjct: 79 NGVSEDGFKFRLFPFSLGDKTHLWEKTLPQNSITTWDDCKKAFFAKFFSNSRTARLRNEI 138
Query: 264 RSLS*KKEESFREYAQRWKGAAARIT-PALDEEEMTQTFLKTLKKDYVERMIIAAPNNF- 321
+ K+ ESF E +R+KG + P + + T + + + A+ NF
Sbjct: 139 SGFTQKQNESFCEAWERFKGYQTKCPHPGFKQASLLSTLYRGVLPKLRMLLDTASNGNFL 198
Query: 322 SEMVTMGTRLEEAVREGIIVF-EKAESSVNASKRYGNGHHKK------------------ 362
++ V G L E + + + E + S++ S + HH++
Sbjct: 199 NKDVEKGWELVENLAQSDGNYNENYDKSISTSSESDDKHHREIKALNDKIDKLLQVQQKH 258
Query: 363 ----KETEVGMVSAGAGQSMATVAPINAAQMPPSYPYVSYSQHPFFPPFYHQYPLPPGQP 418
E EV + G A ++ + Q + Y +Y +P Y + P
Sbjct: 259 VHFASEHEVFQIQEGENDQCAEISYVQ-NQDGYNKGYNNYRPNPNLS--YRSTNV--ANP 313
Query: 419 QVPVYAIAQQMKQQLPVQQQQQNQ 442
Q VY QQ+ Q P Q+Q
Sbjct: 314 QDQVYPQQQQLNQPKPFVSYNQSQ 337
>At1g37200 hypothetical protein
Length = 1564
Score = 42.0 bits (97), Expect = 0.004
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 908 ASYSCLLGRPWIHDAGAVTSTLHQKLKFAKSGKLVTIHGEEAYLVSQLSSFSC 960
A ++ +LGRPW+H AV ST HQ +KF + I+G SQ SS C
Sbjct: 530 APFNAILGRPWLHAMKAVPSTYHQCIKFPSEKGIAVIYG------SQRSSRRC 576
>At4g08050
Length = 1428
Score = 41.6 bits (96), Expect = 0.006
Identities = 33/107 (30%), Positives = 51/107 (46%), Gaps = 6/107 (5%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R K N D + F SL + A W +LS + I
Sbjct: 52 NKFHGLPMEDPLDHLDEFDRLCNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLSHDSI 111
Query: 237 HTFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKG 283
T+D+ AF S + N R R + S K ESF E +R+KG
Sbjct: 112 TTWDDYKKAFLSKFFSNARTARLRNEIYGFSQKTGESFCEAWERFKG 158
Score = 39.7 bits (91), Expect = 0.021
Identities = 70/319 (21%), Positives = 123/319 (37%), Gaps = 33/319 (10%)
Query: 622 PPVKSLPLKENAEPLVIRLPGPVPYTSDRAIPYKYNATII--ENGVEVPLVSLAVMNNTA 679
P V LP K P + DR +P ++ +I +N V+ S V +
Sbjct: 394 PKVTRLPGKSIQNPKEYATAHAITICHDRELPTRHVLDLITRDNDVQEGEASTQVEASVV 453
Query: 680 EGTSTALRSGRVRPPLFQKKAATPTVPPIDKPTPTDVSPVNRDASQPGRSIEDSNLDEIL 739
E +A + +K A + KPTP P R++ + +
Sbjct: 454 EFNHSAGSRHLTQSTSEEKAAIIERMVKRFKPTPL-----------PLRALPWTFRKAWM 502
Query: 740 RLIKRSDYKIVDQLLQTPSKISILSLLLSSAAHRDTLLKVLEQAYVDHEVTVDHFGSIVG 799
K K +D++ + +L+L+L H+ +LE+ + H D
Sbjct: 503 ERYKSVAAKQLDEIEAVMPLMEVLNLILDP--HKVVRNLILERIKMYH----DSDDESDA 556
Query: 800 NITACSNLWFSEDELPEAGKHHNLALHISVNCKSDMISNVLVDTGSSLNVMPKS---TLD 856
+ ++ +++L + G + L S+ S+ L D G+S+N+MP S L+
Sbjct: 557 TPSRAADKRIVQEKLEDPG---SFTLPCSIG--EFAFSDCLCDLGASVNLMPLSMARRLE 611
Query: 857 QLSYRGTPLRRSTFLVKAFNGTRKSVLGEIDLPITIGPETFLITFQVMDINASYS--CLL 914
+ Y+ L L+ A +RK DLP+ I F V+D+ + +L
Sbjct: 612 FIQYKPCDLT----LILADRSSRKHFGMLKDLPVMINGVEVPTDFVVLDMEVEHKDPLIL 667
Query: 915 GRPWIHDAGAVTSTLHQKL 933
GRP++ GAV K+
Sbjct: 668 GRPFLASVGAVIDVKEGKI 686
>At3g32890 Athila ORF 1, putative
Length = 755
Score = 40.8 bits (94), Expect = 0.009
Identities = 32/107 (29%), Positives = 50/107 (45%), Gaps = 6/107 (5%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ ++ R K N D + F SL + A W +L + I
Sbjct: 5 NKFHGLPMEDPLDHLDEFDRLYNLTKINGVSEDGFKLRLFPFSLGDKAHIWEKNLPHDSI 64
Query: 237 HTFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKG 283
T+D+ AF S + N R R + S K ESF E +R+KG
Sbjct: 65 TTWDDCKKAFLSKFFSNARTARLRNEISGFSQKTRESFCEAWERFKG 111
Score = 34.7 bits (78), Expect = 0.68
Identities = 30/102 (29%), Positives = 46/102 (44%), Gaps = 9/102 (8%)
Query: 837 SNVLVDTGSSLNVMPKST---LDQLSYRGTPLRRSTFLVKAFNGTRKSVLGEIDLPITIG 893
S+ L D G+S+++MP S L+ + Y+ L L+ A RK DLP+ I
Sbjct: 541 SDCLCDLGASVSLMPLSVARRLEFIQYKPCDLT----LILADRSFRKPFGMLKDLPVMIN 596
Query: 894 PETFLITFQVMDINASYS--CLLGRPWIHDAGAVTSTLHQKL 933
F V+D+ + +LGRP + GAV K+
Sbjct: 597 GVEVPTDFVVLDMEVEHKDPLILGRPLLASVGAVIDVREGKI 638
>At2g07480 F9A16.15
Length = 1012
Score = 40.8 bits (94), Expect = 0.009
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 18/191 (9%)
Query: 183 DRYNGLTC--PQNHIIKYVRKMGNYKDN----DSLMIHCFQDSLMEDAAEWYTSLSKNDI 236
++++GL P +H+ + R K N +S + F SL + A W +L I
Sbjct: 47 NKFHGLPMEDPLDHLDNFDRLCSLTKINGVSEESFKLRLFPFSLGDKAHLWEKTLPVKSI 106
Query: 237 HTFDELAAAFKSHYGFNIRLKPNREFLRSLS*KKEESFREYAQRWKGAAARITPALDEEE 296
T+D+ AF + + N R R + + K ESF E +R+KG + P +
Sbjct: 107 DTWDDCKKAFLAKFFSNSRKARLRSEISGFNQKNSESFSEAWERFKGYTTQ-CPHHESLP 165
Query: 297 MTQTFLKTLKKDYVERMIIAAPNNFSEMVTMGTRLEEAVREGIIVFEK-AESSVNASKRY 355
+ L+ L K RM++ +N G L + V EG + E A+S N ++ Y
Sbjct: 166 PQYSILRCLPK---IRMLLDTASN-------GNILNKDVAEGWELVENLAQSHRNYNEDY 215
Query: 356 GNGHHKKKETE 366
+ ++E
Sbjct: 216 DRTNRGSSDSE 226
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.345 0.151 0.521
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,585,373
Number of Sequences: 26719
Number of extensions: 2021805
Number of successful extensions: 10209
Number of sequences better than 10.0: 91
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 60
Number of HSP's that attempted gapping in prelim test: 9884
Number of HSP's gapped (non-prelim): 280
length of query: 2334
length of database: 11,318,596
effective HSP length: 115
effective length of query: 2219
effective length of database: 8,245,911
effective search space: 18297676509
effective search space used: 18297676509
T: 11
A: 40
X1: 15 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.6 bits)
S2: 68 (30.8 bits)
Medicago: description of AC147714.8