BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC147483.2 + phase: 0 
         (384 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g36850 unknown protein                                             195  4e-50
At2g41050 unknown protein                                             127  1e-29
At4g20100 putative protein                                            125  4e-29
At5g59470 unknown protein                                              38  0.008
At4g07390 unknown protein                                              36  0.031
At5g40670 unknown protein                                              30  2.2
At1g04300 unknown protein                                              28  8.4

>At4g36850 unknown protein
          Length = 374

 Score =  195 bits (495), Expect = 4e-50
 Identities = 85/121 (70%), Positives = 105/121 (86%)

Query: 5   YCVKENKECVKWVETYFKDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGI 64
           YC+KE K CV+WVE YF DCLCNL DD+SF+LG+ SL+ WGVAEIPQ+IT FR KSS+G+
Sbjct: 6   YCLKEKKTCVRWVEIYFDDCLCNLNDDVSFALGIASLLCWGVAEIPQVITNFRTKSSNGV 65

Query: 65  SLAFLLTWVAGDICNLVGCLLEPATLPTQFYTALLYASTTIILLLQIVYYDHILRWCKHR 124
           SL+FLL WVAGDI NLVGCLLEPATLPTQFYTALLY  +T++L++Q +YYD+I + C+HR
Sbjct: 66  SLSFLLAWVAGDIFNLVGCLLEPATLPTQFYTALLYTVSTVVLVIQTIYYDYIYKLCRHR 125

Query: 125 Q 125
           +
Sbjct: 126 R 126


>At2g41050 unknown protein
          Length = 376

 Score =  127 bits (319), Expect = 1e-29
 Identities = 58/100 (58%), Positives = 78/100 (78%)

Query: 27  NLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCLLE 86
           + RD +S SLG++S++SWGVAEIPQI+T +  KS+ G+S+ FL TW+ GDI NL+GCL+E
Sbjct: 6   SFRDGLSLSLGIISVISWGVAEIPQIMTNYSEKSTEGLSITFLTTWMIGDIFNLLGCLME 65

Query: 87  PATLPTQFYTALLYASTTIILLLQIVYYDHILRWCKHRQN 126
           PATLPTQFY ALLY  TT +L +Q +YY HI    K+R++
Sbjct: 66  PATLPTQFYMALLYTVTTSVLYVQSIYYGHIYPRLKNRRD 105


>At4g20100 putative protein
          Length = 288

 Score =  125 bits (314), Expect = 4e-29
 Identities = 57/100 (57%), Positives = 78/100 (78%), Gaps = 1/100 (1%)

Query: 28  LRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLVGCLLEP 87
           +RDD+S SLG++S++SW VAEIPQI+T +  KS  G+S+ FL TW+ GDI N+VGCL+EP
Sbjct: 2   IRDDLSLSLGIISVISWSVAEIPQIMTNYNQKSIEGVSITFLTTWMLGDIFNVVGCLMEP 61

Query: 88  ATLPTQFYTALLYASTTIILLLQIVYYDHIL-RWCKHRQN 126
           A+LP QFYTA+LY   T++L +Q +YY HI  R  K+R+N
Sbjct: 62  ASLPVQFYTAVLYTLATLVLYVQSIYYGHIYPRLMKNRRN 101


>At5g59470 unknown protein
          Length = 148

 Score = 38.1 bits (87), Expect = 0.008
 Identities = 29/93 (31%), Positives = 44/93 (47%), Gaps = 5/93 (5%)

Query: 22  KDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLV 81
           KDCL  L   IS  LG   + +    ++PQI+ I  NKS  G+S+      V G   +L 
Sbjct: 23  KDCLLPL---ISKLLGYFLVAASMTVKLPQIMKIVDNKSVKGLSVVAFELEVIGYTISLA 79

Query: 82  GCLLEPATLPTQFYTALLYASTTIILLLQIVYY 114
            CL +   LP   +  L +     ++L+  +YY
Sbjct: 80  YCLNK--DLPFSAFGELAFLLIQALILVACIYY 110


>At4g07390 unknown protein
          Length = 235

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 5/93 (5%)

Query: 22  KDCLCNLRDDISFSLGLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLLTWVAGDICNLV 81
           KDCL  L   IS  LG   + +    ++PQI+ I ++KS  G+S+      V G   +L 
Sbjct: 23  KDCLLPL---ISKLLGYCLVAASITVKLPQIMKIVQHKSVRGLSVVAFELEVVGYTISLA 79

Query: 82  GCLLEPATLPTQFYTALLYASTTIILLLQIVYY 114
            CL +   LP   +  + +     ++L+  +YY
Sbjct: 80  YCLHK--GLPFSAFGEMAFLLIQALILVACIYY 110


>At5g40670 unknown protein
          Length = 270

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 13/41 (31%), Positives = 26/41 (62%), Gaps = 1/41 (2%)

Query: 31 DISFSL-GLMSLVSWGVAEIPQIITIFRNKSSHGISLAFLL 70
          +IS+ + G ++  SW ++  PQ+I  FR +S  G++  F++
Sbjct: 10 EISYEIVGWIAFASWSISFYPQLILNFRRRSVVGLNFDFVM 50


>At1g04300 unknown protein
          Length = 1082

 Score = 28.1 bits (61), Expect = 8.4
 Identities = 22/65 (33%), Positives = 33/65 (49%), Gaps = 6/65 (9%)

Query: 149 LESKTKSSVLWDCNT-KWH--TKRSSSRGVLLHVSK---IVSGECNSTLVYPSKSC*KWS 202
           LE +  SSVLWD +  + H  +   SSRG  + +S    I  G+ +ST+   S +C   S
Sbjct: 539 LEDRDSSSVLWDTDALEIHPPSSEGSSRGRGISISTPNGITEGKSHSTMDDSSSTCSNDS 598

Query: 203 FSLGI 207
              G+
Sbjct: 599 IRSGV 603


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.354    0.155    0.589 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,747,750
Number of Sequences: 26719
Number of extensions: 289743
Number of successful extensions: 1313
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 1307
Number of HSP's gapped (non-prelim): 8
length of query: 384
length of database: 11,318,596
effective HSP length: 101
effective length of query: 283
effective length of database: 8,619,977
effective search space: 2439453491
effective search space used: 2439453491
T: 11
A: 40
X1: 14 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.6 bits)
S2: 61 (28.1 bits)