BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147010.3 - phase: 0 /pseudo
(675 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g73360 putative homeobox protein 292 5e-79
At1g17920 unknown protein 280 1e-75
At4g04890 putative homeotic protein 264 1e-70
At1g05230 homeobox like protein 263 2e-70
At3g03260 unknown protein 262 4e-70
At4g21750 L1 specific homeobox gene ATML1/ovule-specific homeobo... 256 3e-68
At1g34650 hypothetical protein 246 4e-65
At5g17320 homeobox protein 236 4e-62
At4g00730 homeodomain protein AHDP 231 1e-60
At3g61150 homeobox protein 222 6e-58
At1g79840 homeobox protein (GLABRA2) 218 9e-57
At5g52170 homeodomain transcription factor-like 218 1e-56
At2g32370 putative homeodomain transcription factor 202 6e-52
At4g25530 homeodomain-containing transcription factor FWA 180 2e-45
At5g46880 homeobox protein 162 7e-40
At4g17710 GLABRA2 like protein 133 4e-31
At5g07260 unknown protein 74 2e-13
At5g03790 homeodomain -like protein 47 3e-05
At1g69780 homeobox gene 13 protein 46 6e-05
At5g15150 homeobox protein 46 8e-05
>At1g73360 putative homeobox protein
Length = 722
Score = 292 bits (747), Expect = 5e-79
Identities = 158/405 (39%), Positives = 242/405 (59%), Gaps = 15/405 (3%)
Query: 276 TCLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPG 335
T LFP+I+ ++T+ V G G+ +GAL L+ EEM +LSPLV REF +RYC++ + G
Sbjct: 316 TELFPSIIAASKTLAVISSGMGGTHEGALHLLYEEMEVLSPLVATREFCELRYCQQTEQG 375
Query: 336 VWVITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYR 395
W++ +VS+D P S+ ++ PSGC+I++MP+G VTWVEH+E E+K H +YR
Sbjct: 376 SWIVVNVSYDL--PQFVSHSQSYRFPSGCLIQDMPNGYSKVTWVEHIETEEKELVHELYR 433
Query: 396 DLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVK 455
+++ +GA+ W+ LQRMCER +V A + GVI + EG+ S+++LA RM+
Sbjct: 434 EIIHRGIAFGADRWVTTLQRMCERFASLSVPASSSRDLGGVILSPEGKRSMMRLAQRMIS 493
Query: 456 MFCECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQKV 515
+C ++ ++ + G+RV T + +PNGTV+ AATT WLP Q V
Sbjct: 494 NYCLSVSRSNNTRSTVVSELNEVGIRV-----TAHKSPEPNGTVLCAATTFWLPNSPQNV 548
Query: 516 FEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPT-QRQMVILQESFT 574
F FLKD R QW+ LS GN + E+AHISNG + GNCISV++ T M+ILQES T
Sbjct: 549 FNFLKDERTRPQWDVLSNGNAVQEVAHISNGSHPGNCISVLRGSNATHSNNMLILQESST 608
Query: 575 SSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPFGAS----KSI 630
S G++V+Y+P+D +++A+ GED +P+L G + + + GAS ++
Sbjct: 609 DSSGAFVVYSPVDLAALNIAMSGEDPSYIPLLSSGFTISPDGNGSNSEQGGASTSSGRAS 668
Query: 631 EDGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
GSLIT+ Q LN++S+ +N+ + +T+ +K AL
Sbjct: 669 ASGSLITVGFQIMVSNLPTAKLNMESVETVNNLIGTTVHQIKTAL 713
Score = 110 bits (274), Expect = 3e-24
Identities = 55/101 (54%), Positives = 70/101 (68%), Gaps = 1/101 (0%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HPDE QR QL+ ++GL P+QIK WFQN+R LK QHER N L+ ENDKIR EN+
Sbjct: 52 KECPHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQLKAQHERADNSALKAENDKIRCENI 111
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
I+E LK IC +CGG P +D Q+++ ENA L++E
Sbjct: 112 AIREALKHAICPNCGGPPV-SEDPYFDEQKLRIENAHLREE 151
>At1g17920 unknown protein
Length = 687
Score = 280 bits (717), Expect = 1e-75
Identities = 163/404 (40%), Positives = 237/404 (58%), Gaps = 25/404 (6%)
Query: 276 TCLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPG 335
T LFP+IV ++T+ V G RG+ AL LM EE+ +LSPLV REF ++RYC++++ G
Sbjct: 296 TELFPSIVASSKTLAVISSGLRGNHGDALHLMIEELQVLSPLVTTREFCVLRYCQQIEHG 355
Query: 336 VWVITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYR 395
W I +VS++ P SR ++ PSGC+I++M +G VTWVEH E E++ H +++
Sbjct: 356 TWAIVNVSYEF--PQFISQSRSYRFPSGCLIQDMSNGYSKVTWVEHGEFEEQEPIHEMFK 413
Query: 396 DLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVK 455
D+V + +GAE WI LQRMCER A + GVI + EG+ S+++LA RMV
Sbjct: 414 DIVHKGLAFGAERWIATLQRMCERFTNLLEPATSSLDLGGVIPSPEGKRSIMRLAHRMVS 473
Query: 456 MFCECLTMPGQVELNHLT-LDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQK 514
FC + ++ LD G IR T+ +PNG V+ AAT+ WLP+ Q
Sbjct: 474 NFCLSVGTSNNTRSTVVSGLDEFG-----IRVTSHKSRHEPNGMVLCAATSFWLPISPQN 528
Query: 515 VFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSF--IPTQRQMVILQES 572
VF FLKD R QW+ LS GN + E+AHI+NG GNCISV++ F +Q M+ILQES
Sbjct: 529 VFNFLKDERTRPQWDVLSNGNSVQEVAHITNGSNPGNCISVLRGFNASSSQNNMLILQES 588
Query: 573 -FTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPFGASKSIE 631
SS + VIY P+D +++A+ G+D+ +PILP G + +P G+SK
Sbjct: 589 CIDSSSAALVIYTPVDLPALNIAMSGQDTSYIPILPSGFAI---------SPDGSSKG-- 637
Query: 632 DGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
GSLIT+ Q G LN++S+ +N+ + +T+ +K L
Sbjct: 638 GGSLITVGFQIMVSGLQPAKLNMESMETVNNLINTTVHQIKTTL 681
Score = 105 bits (261), Expect = 1e-22
Identities = 53/100 (53%), Positives = 67/100 (67%), Gaps = 1/100 (1%)
Query: 3 ECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLK 62
EC HPDE QR QL+ ++GL P+QIK WFQN+R K QHER N L+ ENDKIR EN+
Sbjct: 42 ECQHPDEKQRNQLSRELGLAPRQIKFWFQNRRTQKKAQHERADNCALKEENDKIRCENIA 101
Query: 63 IKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
I+E +K IC CG SP +D Q+++ ENAQL+ E
Sbjct: 102 IREAIKHAICPSCGDSPV-NEDSYFDEQKLRIENAQLRDE 140
>At4g04890 putative homeotic protein
Length = 743
Score = 264 bits (674), Expect = 1e-70
Identities = 158/410 (38%), Positives = 236/410 (57%), Gaps = 19/410 (4%)
Query: 276 TCLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPG 335
+C+F IV++A T++V G G+ +GAL +M E + SPLV RE +RYCK+ G
Sbjct: 332 SCVFSGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDG 391
Query: 336 VWVITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYR 395
W + DVS DS RP+T P+ R + PSGC+I+E+P+G VTW+EH+EV+D+ H +Y+
Sbjct: 392 SWAVVDVSLDSLRPST-PILRTRRRPSGCLIQELPNGYSKVTWIEHMEVDDR-SVHNMYK 449
Query: 396 DLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVK 455
LV +GA+ W+ L+R CER S IP + + VI + EGR S++KLA+RMV
Sbjct: 450 PLVQSGLAFGAKRWVATLERQCERLASSMASNIPGD--LSVITSPEGRKSMLKLAERMVM 507
Query: 456 MFCECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQKV 515
FC + ++ VRV R + DD +P G V++AAT+ W+P+ ++V
Sbjct: 508 SFCSGVGASTAHAWTTMSTTGSDDVRVMTRKSMDDPG-RPPGIVLSAATSFWIPVAPKRV 566
Query: 516 FEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIK--SFIPTQRQMVILQESF 573
F+FL+D R +W+ LS G + E+AHI+NG GNC+S+++ S +Q M+ILQES
Sbjct: 567 FDFLRDENSRKEWDILSNGGMVQEMAHIANGHEPGNCVSLLRVNSGNSSQSNMLILQESC 626
Query: 574 TSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVC--------SKNQANLNAPFG 625
T + GSYVIYAP+D M+V L G D + +LP G + NQ
Sbjct: 627 TDASGSYVIYAPVDIVAMNVVLSGGDPDYVALLPSGFAILPDGSVGGGDGNQHQEMVSTT 686
Query: 626 ASKSIEDGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
+S S GSL+T+A Q L++ S+ +NS + T+ +K A+
Sbjct: 687 SSGSC-GGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAV 735
Score = 92.4 bits (228), Expect = 7e-19
Identities = 46/101 (45%), Positives = 64/101 (62%), Gaps = 1/101 (0%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HPD+ QR +L+ + LEP Q+K WFQNKR +K Q ER N L+ +NDK+R EN
Sbjct: 82 KECPHPDDKQRKELSRDLNLEPLQVKFWFQNKRTQMKAQSERHENQILKSDNDKLRAENN 141
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
+ KE L C +CGG P + + Q ++ ENA+L++E
Sbjct: 142 RYKEALSNATCPNCGG-PAAIGEMSFDEQHLRIENARLREE 181
>At1g05230 homeobox like protein
Length = 721
Score = 263 bits (672), Expect = 2e-70
Identities = 153/400 (38%), Positives = 232/400 (57%), Gaps = 15/400 (3%)
Query: 278 LFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVW 337
+F +V++A T+ V G G+ +GAL +M+ E + SPLV RE RYCK+ G W
Sbjct: 327 IFAGMVSRAMTLAVLSTGVAGNYNGALQVMSAEFQVPSPLVPTRETYFARYCKQQGDGSW 386
Query: 338 VITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDL 397
+ D+S DS +PN P +R + SGC+I+E+P+G VTWVEHVEV+D+ H +Y+ +
Sbjct: 387 AVVDISLDSLQPN--PPARCRRRASGCLIQELPNGYSKVTWVEHVEVDDR-GVHNLYKHM 443
Query: 398 VGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVKMF 457
V + +GA+ W+ L R CER I E +GVI EGR S++KLA+RMV F
Sbjct: 444 VSTGHAFGAKRWVAILDRQCERLASVMATNISSGE-VGVITNQEGRRSMLKLAERMVISF 502
Query: 458 CECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQKVFE 517
C ++ L+ VRV R + DD +P G V++AAT+ W+P+P ++VF+
Sbjct: 503 CAGVSASTAHTWTTLSGTGAEDVRVMTRKSVDDPG-RPPGIVLSAATSFWIPVPPKRVFD 561
Query: 518 FLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIK--SFIPTQRQMVILQESFTS 575
FL+D R++W+ LS G + E+AHI+NG GNC+S+++ S +Q M+ILQES T
Sbjct: 562 FLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTD 621
Query: 576 SVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPFGASKSIEDGSL 635
S+VIYAP+D M++ L G D + +LP G + AN AP G + GSL
Sbjct: 622 PTASFVIYAPVDIVAMNIVLNGGDPDYVALLPSGFAILPDGNANSGAPGG-----DGGSL 676
Query: 636 ITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
+T+A Q L++ S+ +N+ +A T+ +K ++
Sbjct: 677 LTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASM 716
Score = 100 bits (248), Expect = 3e-21
Identities = 47/101 (46%), Positives = 68/101 (66%), Gaps = 1/101 (0%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HPD+ QR QL+ ++ LEP Q+K WFQNKR +K+ HER N LR EN+K+RN+NL
Sbjct: 84 KECPHPDDKQRKQLSRELNLEPLQVKFWFQNKRTQMKNHHERHENSHLRAENEKLRNDNL 143
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
+ +E L C +CGG P + + +++ ENA+L++E
Sbjct: 144 RYREALANASCPNCGG-PTAIGEMSFDEHQLRLENARLREE 183
>At3g03260 unknown protein
Length = 699
Score = 262 bits (670), Expect = 4e-70
Identities = 163/422 (38%), Positives = 245/422 (57%), Gaps = 49/422 (11%)
Query: 278 LFPTIVTKAETIKVFEIGS--RGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPG 335
LFPTIV KA TI V G RG+ + L +M E++HILSPLV REF ++R C++++ G
Sbjct: 295 LFPTIVNKANTIHVLGSGLPIRGNCN-VLQVMWEQLHILSPLVPAREFMVVRCCQEIEKG 353
Query: 336 VWVITDVS----FDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTH 391
+W+I DVS FD + +K PSGC+I+ +P V W+EHVEV+ K+ TH
Sbjct: 354 IWIIADVSHRANFDFGN------AACYKRPSGCLIQALPDAHSKVMWIEHVEVDHKLDTH 407
Query: 392 YVYRDLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLAD 451
+YRDL+ + YGA+ WI L+RMCER S+++ +P + VI T E R SV+KL +
Sbjct: 408 KIYRDLLSGGSGYGAKRWIVTLERMCERMALSSIQTLPPSDRSEVITTGEARRSVMKLGE 467
Query: 452 RMVKMFCECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLP 511
RMVK F E LTM G+++ S GVRVSIR +A QP G VV+A+++L +PL
Sbjct: 468 RMVKNFNEMLTMSGKIDFPQ---QSKNGVRVSIRMNI--EAGQPPGIVVSASSSLAIPLT 522
Query: 512 AQKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQRQ------ 565
+VF FL++ R QW+ LS G ++EIA I G NC+++++ PT +
Sbjct: 523 PLQVFAFLQNLDTRQQWDILSYGTVVNEIARIVTGSSETNCVTILRVH-PTHEENNDKMV 581
Query: 566 --------MVILQESFTSSVGSYVIYAPIDRKTMDVALRGE-DSKELPILPYGLIVCSKN 616
M++LQ+ + ++G ++YAP+D TM A+ GE D +PILP G ++ S
Sbjct: 582 VQDSCKDDMLMLQDCYMDALGGMIVYAPMDMATMHFAVSGEVDPSHIPILPSGFVISSD- 640
Query: 617 QANLNAPFGASKSIED-GSLITLAAQTYAIGQV-----LNVDSLNDINSQLASTILNVKD 670
G ++ED G+L+T+A Q G+ +N S++ +++ ++STI +K
Sbjct: 641 --------GRRSTVEDGGTLLTVAFQILVSGKANRSREVNEKSVDTVSALISSTIQRIKG 692
Query: 671 AL 672
L
Sbjct: 693 LL 694
Score = 98.6 bits (244), Expect = 1e-20
Identities = 47/99 (47%), Positives = 67/99 (67%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HPDE QR QL ++ LEP QIK WFQNKR K Q +R TN LR EN+ ++++N
Sbjct: 43 KECPHPDERQRNQLCRELKLEPDQIKFWFQNKRTQSKTQEDRSTNVLLRGENETLQSDNE 102
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLK 100
+ + LK+ +C CGG PF ++ + +Q+++ ENA+LK
Sbjct: 103 AMLDALKSVLCPACGGPPFGREERGHNLQKLRFENARLK 141
>At4g21750 L1 specific homeobox gene ATML1/ovule-specific homeobox
protein A20
Length = 762
Score = 256 bits (654), Expect = 3e-68
Identities = 160/420 (38%), Positives = 236/420 (56%), Gaps = 30/420 (7%)
Query: 278 LFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVW 337
+F IV++A T++V G G+ +GAL +M E + SPLV RE +RYCK+ G+W
Sbjct: 343 VFCGIVSRALTLEVLSTGVAGNYNGALQVMTAEFQVPSPLVPTRENYFVRYCKQHSDGIW 402
Query: 338 VITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDL 397
+ DVS DS RP+ P++R + PSGC+I+E+ +G VTWVEH+EV+D+ H +Y+ L
Sbjct: 403 AVVDVSLDSLRPS--PITRSRRRPSGCLIQELQNGYSKVTWVEHIEVDDR-SVHNMYKPL 459
Query: 398 VGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVKMF 457
V +GA+ W+ L R CER S IP + + VI + EGR S++KLA+RMV F
Sbjct: 460 VNTGLAFGAKRWVATLDRQCERLASSMASNIPACD-LSVITSPEGRKSMLKLAERMVMSF 518
Query: 458 CECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQKVFE 517
C + L+ VRV R + DD +P G V++AAT+ W+P+ ++VF+
Sbjct: 519 CTGVGASTAHAWTTLSTTGSDDVRVMTRKSMDDPG-RPPGIVLSAATSFWIPVAPKRVFD 577
Query: 518 FLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIK--SFIPTQRQMVILQESFTS 575
FL+D RS+W+ LS G + E+AHI+NG GN +S+++ S Q M+ILQES T
Sbjct: 578 FLRDENSRSEWDILSNGGLVQEMAHIANGRDPGNSVSLLRVNSGNSGQSNMLILQESCTD 637
Query: 576 SVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQA-----NLNAPFGA---- 626
+ GSYVIYAP+D M+V L G D + +LP G + A + NA GA
Sbjct: 638 ASGSYVIYAPVDIIAMNVVLSGGDPDYVALLPSGFAILPDGSARGGGGSANASAGAGVEG 697
Query: 627 ---SKSIE--------DGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
++E GSL+T+A Q L++ S+ +NS + T+ +K AL
Sbjct: 698 GGEGNNLEVVTTTGSCGGSLLTVAFQILVDSVPTAKLSLGSVATVNSLIKCTVERIKAAL 757
Score = 96.7 bits (239), Expect = 4e-20
Identities = 47/101 (46%), Positives = 66/101 (64%), Gaps = 1/101 (0%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HPD+ QR +L+ ++ LEP Q+K WFQNKR +K QHER N L+ ENDK+R EN
Sbjct: 82 KECPHPDDKQRKELSRELSLEPLQVKFWFQNKRTQMKAQHERHENQILKSENDKLRAENN 141
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
+ K+ L C +CGG P + + Q ++ ENA+L++E
Sbjct: 142 RYKDALSNATCPNCGG-PAAIGEMSFDEQHLRIENARLREE 181
>At1g34650 hypothetical protein
Length = 708
Score = 246 bits (627), Expect = 4e-65
Identities = 159/440 (36%), Positives = 245/440 (55%), Gaps = 36/440 (8%)
Query: 246 ILKVHMCAKNLP----NIQDW*RLVA*SWLACFSTCLFPTIVTKAETIKVFEIGSRGSRD 301
++ V M A+NL N + W RL FPTIVT+A+TI V + R
Sbjct: 289 VVVVQMDARNLVDMFLNTEKWARL-------------FPTIVTEAKTIHVLDSMDH-PRQ 334
Query: 302 GALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVWVITDVSF---DSSRPNTAPLSRGW 358
++ E++HILSPLV PREF I+R C+++ +W+I DVS + +TAP+
Sbjct: 335 TFSRVVYEQLHILSPLVLPREFIILRTCQQMKEDLWLIADVSCYLQNVEFESTAPICT-- 392
Query: 359 KHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDLVGEYNLYGAESWIKELQRMCE 418
K PSG +I+ +PHG VTW+EHVEV DK+ H +YRDL+ YGA W LQRMCE
Sbjct: 393 KRPSGVLIQALPHGRSKVTWIEHVEVTDKVWPHQLYRDLLYGGFGYGARRWTATLQRMCE 452
Query: 419 RSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVKMFCECLTMPGQVELNHLTLDSIG 478
R ++ P + GV++T+EGR SV+ L +RM+K F + M +++L + +
Sbjct: 453 RLSLYSMTDFPPTDYPGVVKTIEGRRSVMSLGERMLKNFAWIMKMSDKLDLPQQSGANNS 512
Query: 479 GVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQKVFEFLKDPTKRSQWNGLSCGNPMH 538
GVR+S+R T+ A QP G +V A ++L LPLP +V++FL++ R QW+ GNP+
Sbjct: 513 GVRISVRTNTE--AGQPPGLIVCAGSSLSLPLPPLQVYDFLRNLEVRHQWDVHCQGNPVT 570
Query: 539 EIAHISNGPYHGNCISVIKSFIPTQRQMVILQESFTSSVGSYVIYAPIDRKTMDVALRGE 598
E A GP N ++ ++ + +++ILQ+ F ++G V+YAP++ T A+ G+
Sbjct: 571 EAARFVTGPDQKNNVTFLQPSSVGEYKLMILQDGFIDALGGMVVYAPMNLNTAYSAISGQ 630
Query: 599 -DSKELPILPYGLIVCSKNQANLNAPFGASKSIEDGSLITLAAQTYAIGQV----LNV-D 652
D +PILP G I+ + + + G S +L+TLA Q + G LN+ D
Sbjct: 631 VDPSTIPILPSGFIISRDSHPSSSEVDGGSM-----TLLTLAFQIFVTGPSYYTDLNLKD 685
Query: 653 SLNDINSQLASTILNVKDAL 672
S +N+ ++S + +K L
Sbjct: 686 SATTVNTLVSSAVQRIKAML 705
Score = 75.5 bits (184), Expect = 9e-14
Identities = 40/100 (40%), Positives = 61/100 (61%), Gaps = 1/100 (1%)
Query: 3 ECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLK 62
EC HPD++QR QL ++ L+ KQIK WFQN+R + +E+ N LR EN KIR N
Sbjct: 37 ECPHPDDSQRRQLGNELNLKHKQIKFWFQNRRTQARIHNEKADNIALRVENMKIRCVNEA 96
Query: 63 IKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
+++ L+ +C CGG P ++ +Q+++ +N LK E
Sbjct: 97 MEKALETVLCPPCGG-PHGKEEQLCNLQKLRTKNVILKTE 135
>At5g17320 homeobox protein
Length = 718
Score = 236 bits (601), Expect = 4e-62
Identities = 159/444 (35%), Positives = 243/444 (53%), Gaps = 41/444 (9%)
Query: 246 ILKVHMCAKNLPNIQDW*RLVA*SWLACFSTCLFPTIVTKAETIKVFE-IGSRGSRDGAL 304
++ V M A NL +I L A W LFPTIV +A+TI V + + RG +
Sbjct: 296 VVVVQMDAGNLIDIF----LTAEKWAR-----LFPTIVNEAKTIHVLDSVDHRGKTFSRV 346
Query: 305 LLMNEEMHILSPLVRPREFNIIRYCKKVDPGVWVITDVS-------FDSSRPNTAPLSRG 357
+ E++HILSPLV PREF I+R C++++ VW+I DVS FD S P
Sbjct: 347 IY--EQLHILSPLVPPREFMILRTCQQIEDNVWMIADVSCHLPNIEFDLSFPICT----- 399
Query: 358 WKHPSGCIIREMPHGGCLVTWVEHVEVED-KIHTHYVYRDLVGEYNLYGAESWIKELQRM 416
K PSG +I+ +PHG VTW+EHV V D ++ H +YRDL+ YGA W L+R
Sbjct: 400 -KRPSGVLIQALPHGFSKVTWIEHVVVNDNRVRPHKLYRDLLYGGFGYGARRWTVTLERT 458
Query: 417 CERSLGS-NVEAIPVEETIGVIQTLEGRNSVIKLADRMVKMFCECLTMPGQVELNHLTLD 475
CER + S +V A+P + GV+QT+ GRNSV+ L +RM++ F + M +++ + +
Sbjct: 459 CERLIFSTSVPALPNNDNPGVVQTIRGRNSVMHLGERMLRNFAWMMKMVNKLDFSPQSET 518
Query: 476 SIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQKVFEFLKDPTKRSQWNGLSCGN 535
+ G+R+ +R +++A QP G +V A ++L LPLP +V++FLK+ R QW+ L GN
Sbjct: 519 NNSGIRIGVRI--NNEAGQPPGLIVCAGSSLSLPLPPVQVYDFLKNLEVRHQWDVLCHGN 576
Query: 536 PMHEIAHISNGPYHGNCISVIK-SFIPTQRQMVILQESFTSSVGSYVIYAPIDRKTMDVA 594
P E A G N +S ++ S +++ILQ+SF ++G V YAP+D T A
Sbjct: 577 PATEAARFVTGSNPRNTVSFLEPSIRDINTKLMILQDSFKDALGGMVAYAPMDLNTACAA 636
Query: 595 LRGE-DSKELPILPYGLIVCSKNQANLNAPFGASKSIEDGSLITLAAQTYAIGQVLNVD- 652
+ G+ D +PILP G ++ + + G S +L+T+A Q G + D
Sbjct: 637 ISGDIDPTTIPILPSGFMISRDGRPSEGEAEGGSY-----TLLTVAFQILVSGPSYSPDT 691
Query: 653 ----SLNDINSQLASTILNVKDAL 672
S +N+ ++ST+ +K L
Sbjct: 692 NLEVSATTVNTLISSTVQRIKAML 715
Score = 94.0 bits (232), Expect = 2e-19
Identities = 46/101 (45%), Positives = 61/101 (59%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HPDE QR L ++ L+PKQIK WFQNKR K +E+ N LR EN KIR EN
Sbjct: 46 KECPHPDEFQRRLLGEELNLKPKQIKFWFQNKRTQAKSHNEKADNAALRAENIKIRRENE 105
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
+++ L +C CGG +D +Q+++ +NA LK E
Sbjct: 106 SMEDALNNVVCPPCGGRGPGREDQLRHLQKLRAQNAYLKDE 146
>At4g00730 homeodomain protein AHDP
Length = 590
Score = 231 bits (588), Expect = 1e-60
Identities = 141/404 (34%), Positives = 222/404 (54%), Gaps = 13/404 (3%)
Query: 276 TCLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPG 335
T +FP V +A T V G G+ +GAL LMN E+ +LSPLV R N +R+CK+ G
Sbjct: 189 TEMFPCNVARATTTDVISGGMAGTINGALQLMNAELQVLSPLVPVRNVNFLRFCKQHAEG 248
Query: 336 VWVITDVSFDSSRPNT--APLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYV 393
VW + DVS D R N+ AP+ R + PSGC+++++ +G VTWVEH E ++ H +
Sbjct: 249 VWAVVDVSIDPVRENSGGAPVIR--RLPSGCVVQDVSNGYSKVTWVEHAEYDEN-QIHQL 305
Query: 394 YRDLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRM 453
YR L+ +G++ W+ LQR CE ++ + + T GR S++KLA RM
Sbjct: 306 YRPLLRSGLGFGSQRWLATLQRQCECLAILISSSVTSHDNTSI--TPGGRKSMLKLAQRM 363
Query: 454 VKMFCECLTMPGQVELNHLTLDSIG-GVRVSIRATTDDDASQPNGTVVTAATTLWLPLPA 512
FC ++ P + LT+ ++ VRV R + DD +P G V++AAT++WLP
Sbjct: 364 TFNFCSGISAPSVHNWSKLTVGNVDPDVRVMTRKSVDDPG-EPPGIVLSAATSVWLPAAP 422
Query: 513 QKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQRQMVILQES 572
Q++++FL++ R +W+ LS G PM E+AHI+ G G + + Q M+ILQE+
Sbjct: 423 QRLYDFLRNERMRCEWDILSNGGPMQEMAHITKGQDQGVSLLRSNAMNANQSSMLILQET 482
Query: 573 FTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQAN-LNAPFGASKSIE 631
+ G+ V+YAP+D M V + G DS + +LP G V + + G + +
Sbjct: 483 CIDASGALVVYAPVDIPAMHVVMNGGDSSYVALLPSGFAVLPDGGIDGGGSGDGDQRPVG 542
Query: 632 DGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
GSL+T+A Q L V+S+ +N+ ++ T+ ++ AL
Sbjct: 543 GGSLLTVAFQILVNNLPTAKLTVESVETVNNLISCTVQKIRAAL 586
Score = 30.0 bits (66), Expect = 4.4
Identities = 17/53 (32%), Positives = 26/53 (48%), Gaps = 1/53 (1%)
Query: 61 LKIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQEASEFIYLINLF 113
+ I+E ++ IC +CGG P + D ++ ENA+LK E L F
Sbjct: 1 MSIREAMRNPICTNCGG-PAMLGDVSLEEHHLRIENARLKDELDRVCNLTGKF 52
>At3g61150 homeobox protein
Length = 808
Score = 222 bits (565), Expect = 6e-58
Identities = 134/416 (32%), Positives = 225/416 (53%), Gaps = 34/416 (8%)
Query: 278 LFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVW 337
+FP++V++ T ++ G G R+GAL LM+ E+ +LSPLV R+ + +R+CK+ GVW
Sbjct: 401 MFPSMVSRTSTTEIISSGM-GGRNGALHLMHAELQLLSPLVPVRQVSFLRFCKQHAEGVW 459
Query: 338 VITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDL 397
+ DVS DS R ++ R + PSGC++++M +G VTW+EH E ++ H H +YR L
Sbjct: 460 AVVDVSIDSIREGSSSSCR--RLPSGCLVQDMANGYSKVTWIEHTEYDEN-HIHRLYRPL 516
Query: 398 VGEYNLYGAESWIKELQRMCE-------RSLGSNVEAIPVEETIGVIQTLEGRNSVIKLA 450
+ +GA W+ LQR CE ++ ++ P+ GR S++KLA
Sbjct: 517 LRCGLAFGAHRWMAALQRQCECLTILMSSTVSTSTNPSPIN--------CNGRKSMLKLA 568
Query: 451 DRMVKMFCECLTMPGQVELNHLTLDSIG-GVRVSIRATTDDDASQPNGTVVTAATTLWLP 509
RM FC + + + L + ++ VR+ R + ++ +P G ++ AAT++W+P
Sbjct: 569 KRMTDNFCGGVCASSLQKWSKLNVGNVDEDVRIMTRKSVNNPG-EPPGIILNAATSVWMP 627
Query: 510 LPAQKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIK--SFIPTQRQMV 567
+ +++F+FL + RS+W+ LS G PM E+AHI+ G N +S+++ + Q M+
Sbjct: 628 VSPRRLFDFLGNERLRSEWDILSNGGPMKEMAHIAKGHDRSNSVSLLRASAINANQSSML 687
Query: 568 ILQESFTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANL------- 620
ILQE+ + G+ V+YAP+D M + G DS + +LP G + QA
Sbjct: 688 ILQETSIDAAGAVVVYAPVDIPAMQAVMNGGDSAYVALLPSGFAILPNGQAGTQRCAAEE 747
Query: 621 -NAPFGASKSIEDGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
N+ E GSL+T+A Q L V+S+ +N+ ++ T+ +K AL
Sbjct: 748 RNSIGNGGCMEEGGSLLTVAFQILVNSLPTAKLTVESVETVNNLISCTVQKIKAAL 803
Score = 98.6 bits (244), Expect = 1e-20
Identities = 47/112 (41%), Positives = 70/112 (61%), Gaps = 1/112 (0%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HPDE QR L+ ++ L+P+Q+K WFQN+R +K Q ER N LR+ENDK+R EN+
Sbjct: 130 KECAHPDEKQRLDLSRRLNLDPRQVKFWFQNRRTQMKTQIERHENALLRQENDKLRAENM 189
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQEASEFIYLINLF 113
++E ++ +C +CGG P + + Q ++ EN++LK E L F
Sbjct: 190 SVREAMRNPMCGNCGG-PAVIGEISMEEQHLRIENSRLKDELDRVCALTGKF 240
>At1g79840 homeobox protein (GLABRA2)
Length = 747
Score = 218 bits (555), Expect = 9e-57
Identities = 135/404 (33%), Positives = 220/404 (54%), Gaps = 14/404 (3%)
Query: 279 FPTIVTKAETIKVFEIGSRGSR-DGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVW 337
F +++KA T+ V G SR DGA+ LM EM +L+P+V RE +R C+++ P W
Sbjct: 343 FACLISKAATVDVIRQGEGPSRIDGAIQLMFGEMQLLTPVVPTREVYFVRSCRQLSPEKW 402
Query: 338 VITDVSF---DSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVY 394
I DVS DS+ A L + K PSGCII + +G VTWVEH++V ++
Sbjct: 403 AIVDVSVSVEDSNTEKEASLLKCRKLPSGCIIEDTSNGHSKVTWVEHLDVSAST-VQPLF 461
Query: 395 RDLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMV 454
R LV +GA W+ LQ CER + +P ++++GV TL GR SV+K+A RM
Sbjct: 462 RSLVNTGLAFGARHWVATLQLHCERLVFFMATNVPTKDSLGVT-TLAGRKSVLKMAQRMT 520
Query: 455 KMFCECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQK 514
+ F + + +T + +RVS R D +P G +V A+++LWLP+
Sbjct: 521 QSFYRAIAASSYHQWTKITTKTGQDMRVSSRKNLHDPG-EPTGVIVCASSSLWLPVSPAL 579
Query: 515 VFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQRQMVILQESFT 574
+F+F +D +R +W+ LS G + IA++S G GN ++ I++ ++ + +LQ+S T
Sbjct: 580 LFDFFRDEARRHEWDALSNGAHVQSIANLSKGQDRGNSVA-IQTVKSREKSIWVLQDSST 638
Query: 575 SSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCS---KNQANLNAPFGASKSIE 631
+S S V+YAP+D T + L G D + ILP G + +++ + ++ +
Sbjct: 639 NSYESVVVYAPVDINTTQLVLAGHDPSNIQILPSGFSIIPDGVESRPLVITSTQDDRNSQ 698
Query: 632 DGSLITLAAQTY---AIGQVLNVDSLNDINSQLASTILNVKDAL 672
GSL+TLA QT + LN++S+ + + ++ T+ N+K +L
Sbjct: 699 GGSLLTLALQTLINPSPAAKLNMESVESVTNLVSVTLHNIKRSL 742
Score = 78.6 bits (192), Expect = 1e-14
Identities = 41/103 (39%), Positives = 58/103 (55%), Gaps = 12/103 (11%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KE HPDE QR QL+ ++GL P+Q+K WFQN+R +K ER N L+ E +K+R EN
Sbjct: 121 KETPHPDEKQRQQLSKQLGLAPRQVKFWFQNRRTQIKAIQERHENSLLKAELEKLREENK 180
Query: 62 KIKEELKA--KICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
++E C +CGG P ++ EN++LK E
Sbjct: 181 AMRESFSKANSSCPNCGGGP----------DDLHLENSKLKAE 213
>At5g52170 homeodomain transcription factor-like
Length = 682
Score = 218 bits (554), Expect = 1e-56
Identities = 139/407 (34%), Positives = 219/407 (53%), Gaps = 24/407 (5%)
Query: 278 LFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVW 337
+F IV A T++V GS GSR+G++LLM E ++SPLV ++ +RYCK+ G+W
Sbjct: 284 MFECIVAVASTLEVISNGSDGSRNGSILLMQAEFQVMSPLVPIKQKKFLRYCKQHGDGLW 343
Query: 338 VITDVSFDSSRPNTAPLSRGWK--HPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYR 395
+ DVS+D +R N S G PSGCII+++ +G VTW+EH E E+ HTH +Y+
Sbjct: 344 AVVDVSYDINRGNENLKSYGGSKMFPSGCIIQDIGNGCSKVTWIEHSEYEES-HTHSLYQ 402
Query: 396 DLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVK 455
L+ GA W+ LQR CE S + E+ G+ G S++KLA RM
Sbjct: 403 PLLSSSVGLGATKWLATLQRQCE----SFTMLLSSEDHTGLSHA--GTKSILKLAQRMKL 456
Query: 456 MFCECLTMPGQVELNHLTLDSIG-GVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQK 514
F +T + L +++G R+ R + +P+G V++AAT+LWLP+ Q+
Sbjct: 457 NFYSGITASCIHKWEKLLAENVGQDTRILTRKSL-----EPSGIVLSAATSLWLPVTQQR 511
Query: 515 VFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQRQ--MVILQES 572
+FEFL D R+QW+ LS G M + G G+C+S++++ Q + M+ILQE+
Sbjct: 512 LFEFLCDGKCRNQWDILSNGASMENTLLVPKGQQEGSCVSLLRAAGNDQNESSMLILQET 571
Query: 573 FTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPF----GASK 628
+ G+ V+YAP+D +M+ + G DS + +LP G + ++ + F G
Sbjct: 572 WNDVSGALVVYAPVDIPSMNTVMSGGDSAYVALLPSGFSILPDGSSSSSDQFDTDGGLVN 631
Query: 629 SIEDGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDAL 672
G L+T+ Q LNV+S+ +N+ +A TI ++ AL
Sbjct: 632 QESKGCLLTVGFQILVNSLPTAKLNVESVETVNNLIACTIHKIRAAL 678
Score = 103 bits (256), Expect = 4e-22
Identities = 52/113 (46%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KEC HP+E QR +L K+ LE KQIK WFQN+R +K Q ER N L++EN+K+R EN
Sbjct: 77 KECPHPNEKQRLELGKKLTLESKQIKFWFQNRRTQMKTQLERHENVILKQENEKLRLENS 136
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQ-EMKQENAQLKQEASEFIYLINLF 113
+KE ++ +C+DCGG+ P +F Q +++ ENA+LK+E L N F
Sbjct: 137 FLKESMRGSLCIDCGGAVIP--GEVSFEQHQLRIENAKLKEELDRICALANRF 187
>At2g32370 putative homeodomain transcription factor
Length = 721
Score = 202 bits (513), Expect = 6e-52
Identities = 134/402 (33%), Positives = 209/402 (51%), Gaps = 30/402 (7%)
Query: 278 LFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVW 337
+F IV +A T + + G+ +G L +M+ E +LSPLV RE +RYCK+ G+W
Sbjct: 334 MFAGIVGRARTHEQIMADAAGNFNGNLQIMSAEYQVLSPLVTTRESYFVRYCKQQGEGLW 393
Query: 338 VITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDL 397
+ D+S D PN R + PSGC+I+EM G VTWVEHVEV+D ++ ++ L
Sbjct: 394 AVVDISIDHLLPNINLKCR--RRPSGCLIQEMHSGYSKVTWVEHVEVDDA-GSYSIFEKL 450
Query: 398 VGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVKMF 457
+ + A W+ L R CER S++ + + + T G+ S++K+A+R+ + F
Sbjct: 451 ICTGQAFAANRWVGTLVRQCERI--SSILSTDFQSVDSAL-TNHGKMSMLKIAERIARTF 507
Query: 458 CECLTMPGQVELNHLTLDSIGGVRVSIRATTD---DDASQPNGTVVTAATTLWLPLPAQK 514
G T+ S G IR T +D +P G ++ AAT+ WLP P
Sbjct: 508 -----FAGMTNATGSTIFS-GVEGEDIRVMTMKSVNDPGKPPGVIICAATSFWLPAPPNT 561
Query: 515 VFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQRQMVILQESFT 574
VF+FL++ T R W+ L G MH+IA I+NG NC S+++ ++ +M+I+QE+ T
Sbjct: 562 VFDFLREATHRHNWDVLCNGEMMHKIAEITNGIDKRNCASLLRHGHTSKSKMMIVQETST 621
Query: 575 SSVGSYVIYAPIDRKTMDVALR-GEDSKELPILPYGLIVCSKNQANLNAPFGASK--SIE 631
S+V+YAP+D +MD+ L G D + ILP G + P G K E
Sbjct: 622 DPTASFVLYAPVDMTSMDITLHGGGDPDFVVILPSGFAI---------FPDGTGKPGGKE 672
Query: 632 DGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKD 670
GSL+T++ Q L+V S+ + + +T+ +KD
Sbjct: 673 GGSLLTISFQMLVESGPEARLSVSSVATTENLIRTTVRRIKD 714
Score = 83.2 bits (204), Expect = 4e-16
Identities = 36/76 (47%), Positives = 51/76 (66%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
+EC HPD+ QR L+ ++GL+P QIK WFQNKR K+Q ER N LR N+ +R+EN
Sbjct: 88 RECPHPDDKQRYDLSAQLGLDPVQIKFWFQNKRTQNKNQQERFENSELRNLNNHLRSENQ 147
Query: 62 KIKEELKAKICLDCGG 77
+++E + +C CGG
Sbjct: 148 RLREAIHQALCPKCGG 163
>At4g25530 homeodomain-containing transcription factor FWA
Length = 686
Score = 180 bits (457), Expect = 2e-45
Identities = 114/403 (28%), Positives = 202/403 (49%), Gaps = 25/403 (6%)
Query: 278 LFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVDPGVW 337
+F IV A T KV GS G++ G+L + E ++SPLV R+ IRYCK++ G+W
Sbjct: 297 VFAPIVPVASTHKVLSTGSGGTKSGSLQQIQAEFQVISPLVPKRKVTFIRYCKEIRQGLW 356
Query: 338 VITDVSFDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHYVYRDL 397
V+ DV+ + P P + PSG II ++ +G VTW+E E + H H +Y+ L
Sbjct: 357 VVVDVT-PTQNPTLLPYGCSKRLPSGLIIDDLSNGYSQVTWIEQAEYNES-HIHQLYQPL 414
Query: 398 VGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADRMVKMF 457
+G GA+ W+ LQR CE SL + E + G+ + +G ++KLA RM +
Sbjct: 415 IGYGIGLGAKRWLATLQRHCE-SLSTLSSTNLTEISPGL--SAKGATEIVKLAQRMTLNY 471
Query: 458 CECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLPLPAQKVFE 517
+T P + + ++++ + ++ + G V++A+T++WLP+ +F
Sbjct: 472 YRGITSPSVDKWQKIQVENVAQNMSFMIRKNVNEPGELTGIVLSASTSVWLPVNQHTLFA 531
Query: 518 FLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQRQMVILQESFTSSV 577
F+ + R +W+ L+ M E I HGN IS++K M++LQE + +
Sbjct: 532 FISHLSFRHEWDILTNDTTMEETIRIQKAKRHGNIISLLKI---VNNGMLVLQEIWNDAS 588
Query: 578 GSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPFGASKSIEDGSLIT 637
G+ V+YAP++ ++++ RGE+S + LP G + P G + S G+
Sbjct: 589 GAMVVYAPVETNSIELVKRGENSDSVKFLPSGFSI---------VPDGVNGSYHRGNTGG 639
Query: 638 LAAQTYAIGQVLNVD--------SLNDINSQLASTILNVKDAL 672
T+ + ++ ++ ++ + + +A TI+ +K AL
Sbjct: 640 GCLLTFGLQILVGINPTAALIQGTVKSVETLMAHTIVKIKSAL 682
Score = 63.9 bits (154), Expect = 3e-10
Identities = 33/101 (32%), Positives = 57/101 (55%), Gaps = 1/101 (0%)
Query: 6 HPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLKIKE 65
HP E QR +L ++ + Q+K+WFQNKR + K ++ N TLR E+D++ +++
Sbjct: 64 HPTEEQRYELGQRLNMGVNQVKNWFQNKRNLEKINNDHLENVTLREEHDRLLATQDQLRS 123
Query: 66 ELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQEASEF 106
+ +C CG + D + VQ++ ENA L++E +F
Sbjct: 124 AMLRSLCNICGKAT-NCGDTEYEVQKLMAENANLEREIDQF 163
>At5g46880 homeobox protein
Length = 783
Score = 162 bits (409), Expect = 7e-40
Identities = 124/411 (30%), Positives = 195/411 (47%), Gaps = 68/411 (16%)
Query: 278 LFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKK-VDPGV 336
+F +IV +A+T+++ G G+ G+LLL +LSPLV RE +RY ++ + G
Sbjct: 411 MFCSIVARAKTVQIISSGVSGA-SGSLLL------VLSPLVPTREAYFLRYVEQNAETGN 463
Query: 337 WVITDVSFDSSRPNTAPLS----RGWKHPSGCIIREMPHGGCLVTWVEHVEVEDKIHTHY 392
W I D DS P++ + PSGCII++MP+G V WVEHVEV++K H H
Sbjct: 464 WAIVDFPIDSFHDQMQPMNTITHEYKRKPSGCIIQDMPNGYSQVKWVEHVEVDEK-HVHE 522
Query: 393 VYRDLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGVIQTLEGRNSVIKLADR 452
+ + V +GA W+ LQR CER I + E R ++++L+ R
Sbjct: 523 TFAEYVKSGMAFGANRWLDVLQRQCER--------IASLMARNITDLGEARRNIMRLSQR 574
Query: 453 MVKMFC-ECLTMPGQ--VELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAATTLWLP 509
+VK FC T GQ L+ T D+ VR++ R + QP G V+ A +T WLP
Sbjct: 575 LVKTFCVNISTAYGQSWTALSETTKDT---VRITTRKMC--EPGQPTGVVLCAVSTTWLP 629
Query: 510 LPAQKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQRQMVIL 569
+VF+ ++D +S L N H + ++L
Sbjct: 630 FSHHQVFDLIRDQHHQS----LVASNSWHNVE-------------------------LML 660
Query: 570 QESFTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPFGASKS 629
QES + GS ++Y+ +D ++ A+ GEDS +PILP G + +N P G S +
Sbjct: 661 QESCIDNSGSLIVYSTVDVDSIQQAMNGEDSSNIPILPLGFSI-----VPVNPPEGISVN 715
Query: 630 IED--GSLITLAAQTYAIGQVL---NVDSLNDINSQLASTILNVKDALMSS 675
L+T+ Q A N+ ++ IN+ L +T+ + AL ++
Sbjct: 716 SHSPPSCLLTVGIQVLASNVPTAKPNLSTVTTINNHLCATVNQITSALSNT 766
Score = 84.7 bits (208), Expect = 2e-16
Identities = 42/101 (41%), Positives = 64/101 (62%), Gaps = 3/101 (2%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KE HPD+ QR +L+ ++GL+P+Q+K WFQN+R +K Q +R N LR END +++EN
Sbjct: 131 KENPHPDDKQRKRLSAELGLKPRQVKFWFQNRRTQMKAQQDRNENVMLRAENDNLKSENC 190
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQE 102
++ EL+ C CGG P + D E+ EN +L++E
Sbjct: 191 HLQAELRCLSCPSCGG-PTVLGDIP--FNEIHIENCRLREE 228
>At4g17710 GLABRA2 like protein
Length = 661
Score = 133 bits (334), Expect = 4e-31
Identities = 116/413 (28%), Positives = 189/413 (45%), Gaps = 85/413 (20%)
Query: 274 FSTCLFPTIVTKAETIKVFEIGSRGSRDGALLLMNEEMHILSPLVRPREFNIIRYCKKVD 333
+S FP IV+ A+T ++ G+ G G LLL N E
Sbjct: 318 WSEMFFP-IVSSAKTAQIISSGASGP-SGTLLLQNAE----------------------- 352
Query: 334 PGVWVITDVSFDSSRPNTAPLSRGWKH-PSGCIIREMPHGGCLVTWVEHVEVEDKIHTHY 392
G W++ D D +P +A + ++ PSGCII+ M +G VTWVEHVEVE+K
Sbjct: 353 EGKWMVVDFPIDRIKPASATTTDQYRRKPSGCIIQAMRNGYSQVTWVEHVEVEEKHVQDE 412
Query: 393 VYRDLVGEYNLYGAESWIKELQRMCERSLGSNVEAIPVEETIGV-------IQTLEGRNS 445
V R+ V +GAE W+ L+R CER +++ A + + G+ I ++E R +
Sbjct: 413 VVREFVESGVAFGAERWLSVLKRQCERM--ASLMATNITDLGGIYITCFTMIPSVEARKN 470
Query: 446 VIKLADRMVKMFC-ECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDASQPNGTVVTAAT 504
++KL+ RMVK FC + GQ T D++ V + G V A +
Sbjct: 471 LMKLSQRMVKTFCLNIINSHGQAP----TKDTVKIVSRKV----------CGGLVPCAVS 516
Query: 505 TLWLPLPAQKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHGNCISVIKSFIPTQR 564
LP Q+VF+ L+D + SQ N H +
Sbjct: 517 VTLLPYSHQQVFDLLRDNQRLSQVE----SNSSHNVE----------------------- 549
Query: 565 QMVILQESFTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYGLIVCSKNQANLNAPF 624
++LQE+ T + GS ++Y+ +D + +A+ GED E+P+LP G V N + +
Sbjct: 550 --LMLQETCTDNSGSLLVYSTVDPVAVQLAMNGEDPSEIPLLPVGFSVVPVNPS--DGVE 605
Query: 625 GASKSIEDGSLITLAAQTYAIG---QVLNVDSLNDINSQLASTILNVKDALMS 674
G+S S L+T+A Q + L++ +++ IN ++ +T+ + AL++
Sbjct: 606 GSSVS-SPSCLLTVAIQVLGSNVTTERLDLSTVSVINHRICATVNRITSALVN 657
Score = 74.7 bits (182), Expect = 2e-13
Identities = 37/111 (33%), Positives = 57/111 (51%), Gaps = 13/111 (11%)
Query: 2 KECHHPDEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENL 61
KE HPD R +L+ K+GL P Q+K WFQNKR +K Q R N L+ EN+ ++ E+
Sbjct: 108 KENAHPDTKTRLRLSKKLGLSPIQVKFWFQNKRTQIKAQQSRSDNAKLKAENETLKTESQ 167
Query: 62 KIKEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQEASEFIYLINL 112
I+ + C CG ++ ENA+L+QE ++++
Sbjct: 168 NIQSNFQCLFCSTCG-------------HNLRLENARLRQELDRLRSIVSM 205
>At5g07260 unknown protein
Length = 541
Score = 74.3 bits (181), Expect = 2e-13
Identities = 76/374 (20%), Positives = 154/374 (40%), Gaps = 41/374 (10%)
Query: 269 SWLACFSTCLFPTIVTKAETIKVF-----EIGSRGSRDGALLLMNEEMHILSPLVRPREF 323
+++ C ++ L ++ K+F ++ + G + M +SPL++ R
Sbjct: 149 AFVPCDASSLVANLMNHVSWQKIFPSIIADVSVESQQRGLQKINVNFMPQISPLIQTRNV 208
Query: 324 NIIRYCKKVDPGVWVITDVS--FDSSRPNTAPLSRGWKHPSGCIIREMPHGGCLVTWVEH 381
++R + ++ W I ++S F S + P + PSG +I+ + +G VT ++H
Sbjct: 209 KLLRRSRHIEDDTWAIAEISMYFSSYAQHLRP--EYMRFPSGYLIQHIANGISKVTILDH 266
Query: 382 VEVEDKIHTHYVYRDLVGEYNL-----YGAESWIKELQR----MCERSLGSNVEAIPVEE 432
+VY++ G +GA+ W+ LQ+ C S+ S I + +
Sbjct: 267 ----------WVYKEEEGMNTFNSNSEFGAQRWLTALQKHYYNTCPVSIPSIGHNIQIFD 316
Query: 433 TIGVIQTLEGRNSVIKLADRMVKMFCECLTMPGQVELNHLTLDSIGGVRVSIRATTDDDA 492
I R +++ L+ MV +FC + G L+++G +IR T +
Sbjct: 317 QIC-------RKNLLNLSSFMVNVFCSGVC--GITGQRWNRLNTVGVSANNIRMFTQESR 367
Query: 493 SQPN--GTVVTAATTLWLPLPAQKVFEFLKDPTKRSQWNGLSCGNPMHEIAHISNGPYHG 550
+V+A + + +F + K+ W+ L M E+ I P
Sbjct: 368 GMSGIPCVLVSATGLARMHTKPEVMFGLINGAEKQEIWSYLESAKDMKELIRIGRHPNSW 427
Query: 551 NCISVIKSFIPTQRQMVILQESFTSSVGSYVIYAPIDRKTMDVALRGEDSKELPILPYG- 609
N +SV ++ ++QE++ G+ +I+ ++ A+ G D + +LP G
Sbjct: 428 NEVSVFSIEWKGSKEWYLIQETYYDESGAMIIHTCVEAPYFAAAINGGDLSGVELLPSGF 487
Query: 610 -LIVCSKNQANLNA 622
+I C + + A
Sbjct: 488 TIIPCESQECFVTA 501
>At5g03790 homeodomain -like protein
Length = 236
Score = 47.0 bits (110), Expect = 3e-05
Identities = 21/61 (34%), Positives = 38/61 (61%)
Query: 8 DEAQRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRRENDKIRNENLKIKEEL 67
D ++ +L+ ++GL+P+QI WFQN+RA K + + +LR+E D + E + +E+
Sbjct: 101 DSDRKVKLSRELGLQPRQIAVWFQNRRARWKAKQLEQLYDSLRQEYDVVSREKQMLHDEV 160
Query: 68 K 68
K
Sbjct: 161 K 161
>At1g69780 homeobox gene 13 protein
Length = 294
Score = 46.2 bits (108), Expect = 6e-05
Identities = 24/64 (37%), Positives = 38/64 (58%), Gaps = 7/64 (10%)
Query: 11 QRCQLAVKIGLEPKQIKSWFQNKRAMLKHQHERETNGTLRR-------ENDKIRNENLKI 63
++ QLA +GL+P+QI WFQN+RA K + + TL+R END ++ N K+
Sbjct: 111 RKMQLARALGLQPRQIAIWFQNRRARWKTKQLEKDYDTLKRQFDTLKAENDLLQTHNQKL 170
Query: 64 KEEL 67
+ E+
Sbjct: 171 QAEI 174
>At5g15150 homeobox protein
Length = 293
Score = 45.8 bits (107), Expect = 8e-05
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 25/102 (24%)
Query: 11 QRCQLAVKIGLEPKQIKSWFQNKRAMLK-HQHERETNG------TLRRENDKIRNENLKI 63
++ QLA +GL+P+QI WFQN+RA K Q ER+ + L+ +ND + N K+
Sbjct: 120 RKMQLAKALGLQPRQIAIWFQNRRARWKTKQLERDYDSLKKQFDVLKSDNDSLLAHNKKL 179
Query: 64 KEELKAKICLDCGGSPFPMKDHQNFVQEMKQENAQLKQEASE 105
EL A +K H ++E+A++K+E +E
Sbjct: 180 HAELVA------------LKKHD------RKESAKIKREFAE 203
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.330 0.142 0.446
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,851,123
Number of Sequences: 26719
Number of extensions: 620373
Number of successful extensions: 2095
Number of sequences better than 10.0: 78
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 1903
Number of HSP's gapped (non-prelim): 111
length of query: 675
length of database: 11,318,596
effective HSP length: 106
effective length of query: 569
effective length of database: 8,486,382
effective search space: 4828751358
effective search space used: 4828751358
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 63 (28.9 bits)
Medicago: description of AC147010.3