BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC147000.7 - phase: 0
(1185 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g58140 hypothetical protein 617 e-177
At3g61330 copia-type polyprotein 614 e-176
At1g48710 hypothetical protein 609 e-174
At4g03810 putative retrotransposon protein 605 e-173
At1g37110 594 e-169
At3g25450 hypothetical protein 575 e-164
At3g60170 putative protein 563 e-160
At2g07550 putative retroelement pol polyprotein 563 e-160
At2g13930 putative retroelement pol polyprotein 562 e-160
At2g15650 putative retroelement pol polyprotein 551 e-157
At1g32590 hypothetical protein, 5' partial 548 e-156
At5g35820 copia-like retrotransposable element 541 e-154
At2g05390 putative retroelement pol polyprotein 540 e-153
At2g21460 putative retroelement pol polyprotein 531 e-150
At3g45520 copia-like polyprotein 530 e-150
At3g59720 copia-type reverse transcriptase-like protein 517 e-146
At4g21360 putative transposable element 513 e-145
At4g17450 retrotransposon like protein 510 e-144
At4g10460 putative retrotransposon 453 e-127
At4g04280 putative transposon protein 379 e-105
>At1g58140 hypothetical protein
Length = 1320
Score = 617 bits (1592), Expect = e-177
Identities = 378/1145 (33%), Positives = 618/1145 (53%), Gaps = 46/1145 (4%)
Query: 60 SLESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNS- 118
++E L+ L+ EE +K++++ V++ TK++ + + G + + R N
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 119 -------NRNKTG-NNSRPQIQQPPKNDA-APPFNCYNCGQADHMARKCRNRTNRPAQ-- 167
N N+ G N+SR + + PK+ CYNCG+ H A +C+ +N+ +
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 168 AHMATDAAPDEPYVAMIT-EINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLL 226
A+ + +E + M + + + + W++D+GAS H+C + MF V L
Sbjct: 306 ANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Query: 227 GDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYT 286
GD +V G G+I ++ + + +V + P ++ N++S L + G+ + + +
Sbjct: 366 GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLS 425
Query: 287 IT--KNGIFVGKGYATDGMFKLNIDMNKISSSAYMLCDFN--IWHSRLCHVN---KRIIS 339
I ++ + + + MF LNI N I+ M +WH R H+N ++S
Sbjct: 426 IRDQESNLITKVPMSKNRMFVLNI-RNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 340 NMSGLGLIPKISLNDFEKCQFCSQAKINKESH--KSVTRITEPFELIHSDLCELDGNLTR 397
+ +P I+ + + C+ C K K S +S +R +P ELIH+D+C +
Sbjct: 485 RKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL 543
Query: 398 NGKRYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGS 457
YF+ FIDD S T VY ++ K+E +IFK++ +E + + IK RSDRG E+ S
Sbjct: 544 GKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
Query: 458 HIFNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTV 517
F +Y ++ GI + T P SP+ NG AERKNRT E+ + + + W E +
Sbjct: 604 KEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACA 663
Query: 518 CYVLNRVP-KTKNKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFI 576
Y+LNR P K+ + +P E R+P +S+ R +G +A+ PD KR KL ++ + FI
Sbjct: 664 VYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFI 723
Query: 577 GYALNSKAYRFYDLKSKTIIESNDVDFYENKFPFKSGDSGGNSGGTDNSVLDQPSEIITS 636
GY NSK Y+ Y+ +K I S ++ F E G+ NS D +
Sbjct: 724 GYDNNSKGYKLYNPDTKKTIISRNIVFDEE------GEWDWNSNEEDYNFFP-------- 769
Query: 637 NENIERDVIEPGRGKRARIAKEYGPEYVAYTIEEDPSSIKEALSSIDADLWQEAINDEMD 696
+ E D EP R + P + E+ + +I+ W+ A+++E+
Sbjct: 770 --HFEEDKPEPTREEPPSEEPTTPPTSPTSSQIEEKCEPMDFQEAIEKKTWRNAMDEEIK 827
Query: 697 SLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLVAKGFRQRENVDFFDTY 756
S+ N+TW LT LP G K IG KW+ K K G +++YKARLVAKG+ QR +D+ + +
Sbjct: 828 SIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLVAKGYSQRAGIDYDEVF 887
Query: 757 SPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCK 816
+PV R+ ++R++ISLAA + +HQMDVK+AFLNG+LEEE+Y++QP+G+++ G+E+KV +
Sbjct: 888 APVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIEQPQGYIVKGEEDKVLR 947
Query: 817 LDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTIICLYVDDLLIFG 876
L K+LYGLKQAP+ W+ + D E +F + +Y K + I CLYVDDL+ G
Sbjct: 948 LKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKEDILIACLYVDDLIFTG 1007
Query: 877 SNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQSHYVEKILRKYNYFYC 936
+N + ++ K + F+M D+G LGI++ + DNGI + Q Y +++L+K+
Sbjct: 1008 NNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDS 1067
Query: 937 KPASTPCDPSVKLF-KNTGDSVRQTEYASIIGSLRYATDCTRPDISYAVGLLCKFTSRPS 995
P TP + +KL K G+ V T + S++GSLRY T CTRPDI YAVG++ ++ P+
Sbjct: 1068 NPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLT-CTRPDILYAVGVVSRYMEHPT 1126
Query: 996 MEHWQAIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLSDDSKATSGYIFSIAGG 1054
H++A +R++RY+K T+ GLHY L GYSD+DW DD K+TSG++F I
Sbjct: 1127 TTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDT 1186
Query: 1055 AVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAA 1114
A +W SKKQ I+ ST E+E +A + A WLR LL E+ L + + + D+ +A
Sbjct: 1187 AFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKIFV--DNKSA 1244
Query: 1115 IAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGLNREKVANTS 1174
IA +N ++ + + I ++ IRE +S V++++V+T++ +AD TK L RE
Sbjct: 1245 IALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADIFTKPLKREDFIKMR 1304
Query: 1175 SRMGL 1179
S +G+
Sbjct: 1305 SLLGV 1309
>At3g61330 copia-type polyprotein
Length = 1352
Score = 614 bits (1584), Expect = e-176
Identities = 378/1161 (32%), Positives = 623/1161 (53%), Gaps = 46/1161 (3%)
Query: 60 SLESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNS- 118
++E L+ L+ EE +K++++ V++ TK++ + + G + + R N
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 119 -------NRNKTG-NNSRPQIQQPPKNDA-APPFNCYNCGQADHMARKCRNRTNRPAQ-- 167
N N+ G N+SR + + PK+ CYNCG+ H A +C+ +N+ +
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 168 AHMATDAAPDEPYVAMIT-EINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLL 226
AH + +E + M + + + + W++D+GAS H+C + MF V L
Sbjct: 306 AHYVEEKIQEEDMLLMASYKKDEQKENHKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Query: 227 GDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYT 286
GD +V G G+I ++ + + +V + P ++ N++S L + G+ + + +
Sbjct: 366 GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLS 425
Query: 287 IT--KNGIFVGKGYATDGMFKLNIDMNKISSSAYMLCDFN--IWHSRLCHVN---KRIIS 339
I ++ + + + MF LNI N I+ M +WH R H+N ++S
Sbjct: 426 IRDQESNLITKVPMSKNRMFVLNI-RNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 340 NMSGLGLIPKISLNDFEKCQFCSQAKINKESH--KSVTRITEPFELIHSDLCELDGNLTR 397
+ +P I+ + + C+ C K K S +S +R +P ELIH+D+C +
Sbjct: 485 RKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL 543
Query: 398 NGKRYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGS 457
YF+ FIDD S T VY ++ K+E +IFK++ +E + + IK RSDRG E+ S
Sbjct: 544 GKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
Query: 458 HIFNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTV 517
F +Y ++ GI + T P SP+ NG ERKNRT E+ + + + W E +
Sbjct: 604 KEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAEAVACA 663
Query: 518 CYVLNRVP-KTKNKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFI 576
Y+LNR P K+ + +P E R+P +S+ R +G +A+ PD KR KL ++ + FI
Sbjct: 664 VYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFI 723
Query: 577 GYALNSKAYRFYDLKSK-TIIESNDVDFYENKFPFKSGDSGGNSGGTDNSVLDQPSEIIT 635
GY NSK Y+ Y+ +K TII N V E ++ + S + N +P+
Sbjct: 724 GYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEP 783
Query: 636 SNENIERDVIEPGRGKRARIAKEYGPEYVA----YTIEEDPSSIK-----------EALS 680
+E P + + E P + + Y + E+ ++ +
Sbjct: 784 PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQK 843
Query: 681 SIDADLWQEAINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLV 740
+I+ W+ A+++E+ S+ N+TW LT LP G K IG KW+ K K G +++YKARLV
Sbjct: 844 AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLV 903
Query: 741 AKGFRQRENVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMD 800
AKG+ QR +D+ + ++PV R+ ++R++ISLAA + +HQMDVK+AFLNG+LEEE+Y++
Sbjct: 904 AKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963
Query: 801 QPEGFVIHGQENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENN 860
QP+G+++ G+E+KV +L K LYGLKQAP+ W+ + D E +F + +Y K +
Sbjct: 964 QPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE 1023
Query: 861 TCTIICLYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQ 920
I CLYVDDL+ G+N + ++ K + F+M D+G LGI++ + DNGI + Q
Sbjct: 1024 DILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQ 1083
Query: 921 SHYVEKILRKYNYFYCKPASTPCDPSVKLF-KNTGDSVRQTEYASIIGSLRYATDCTRPD 979
Y +++L+K+ P TP + +KL K G+ V T + S++GSLRY T CTRPD
Sbjct: 1084 EGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLT-CTRPD 1142
Query: 980 ISYAVGLLCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLS 1038
I YAVG++ ++ P+ H++A +R++RY+K T+ GLHY L GYSD+DW
Sbjct: 1143 ILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDV 1202
Query: 1039 DDSKATSGYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLW 1098
DD K+TSG++F I A +W SKKQ I+ ST E+E +A + A WLR LL E+ L
Sbjct: 1203 DDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLP 1262
Query: 1099 ERPLPAVLIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLA 1158
+ + + D+ +AIA +N ++ + + I ++ IRE +S V++++V+T++ +A
Sbjct: 1263 QEEPTKIFV--DNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVA 1320
Query: 1159 DPLTKGLNREKVANTSSRMGL 1179
D TK L RE S +G+
Sbjct: 1321 DFFTKPLKRENFIKMRSLLGV 1341
>At1g48710 hypothetical protein
Length = 1352
Score = 609 bits (1571), Expect = e-174
Identities = 376/1161 (32%), Positives = 623/1161 (53%), Gaps = 46/1161 (3%)
Query: 60 SLESLITRLRIEEEARKQEQ-------NEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNR 112
++E L+ L+ EE +K+++ N ++ N + ++ G ++ G+ R
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 113 PMNKNS-NRNKTG-NNSRPQIQQPPKNDA-APPFNCYNCGQADHMARKCRNRTNRPAQ-- 167
+ N N+ G N+SR + + PK+ CYNCG+ H A +C+ +N+ +
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFEEK 305
Query: 168 AHMATDAAPDEPYVAMIT-EINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLL 226
A+ + +E + M + + + + W++D+GAS H+C + MF V L
Sbjct: 306 ANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Query: 227 GDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYT 286
GD +V G G+I ++ + + +V + P ++ N++S L + G+ + + +
Sbjct: 366 GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLS 425
Query: 287 IT--KNGIFVGKGYATDGMFKLNIDMNKISSSAYMLCDFN--IWHSRLCHVN---KRIIS 339
I ++ + + + MF LNI N I+ M +WH R H+N ++S
Sbjct: 426 IRDQESNLITKVPMSKNRMFVLNI-RNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 340 NMSGLGLIPKISLNDFEKCQFCSQAKINKESH--KSVTRITEPFELIHSDLCELDGNLTR 397
+ +P I+ + + C+ C K K S +S +R + ELIH+D+C +
Sbjct: 485 RKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPKESSSRAQKSLELIHTDVCGPIKPKSL 543
Query: 398 NGKRYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGS 457
YF+ FIDD S T VY ++ K+E +IFK++ +E + + IK RSDRG E+ S
Sbjct: 544 GKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDRGGEFTS 603
Query: 458 HIFNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTV 517
F +Y ++ GI + T P SP+ NG AERKNRT E+ + + + W E +
Sbjct: 604 KEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACA 663
Query: 518 CYVLNRVP-KTKNKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFI 576
Y+LNR P K+ + +P E R+ +S+ R +G +A+ PD KR KL ++ + FI
Sbjct: 664 VYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSEKYIFI 723
Query: 577 GYALNSKAYRFYDLKSK-TIIESNDVDFYENKFPFKSGDSGGNSGGTDNSVLDQPSEIIT 635
GY NSK Y+ Y+ +K TII N V E ++ + S + N +P+
Sbjct: 724 GYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDEPEPTREEP 783
Query: 636 SNENIERDVIEPGRGKRARIAKEYGPEYVA----YTIEEDPSSIK-----------EALS 680
+E P + + E P + + Y + E+ ++ +
Sbjct: 784 PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQE 843
Query: 681 SIDADLWQEAINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLV 740
+I+ W+ A+++E+ S+ N+TW LT LP G KTIG KW+ K K G +++YKARLV
Sbjct: 844 AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKARLV 903
Query: 741 AKGFRQRENVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMD 800
AKG+ QR +D+ + ++PV R+ ++R++ISLAA + +HQMDVK+AFLNG+LEEE+Y++
Sbjct: 904 AKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963
Query: 801 QPEGFVIHGQENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENN 860
QP+G+++ G+E+KV +L K+LYGLKQAP+ W+ + D E +F + +Y K +
Sbjct: 964 QPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE 1023
Query: 861 TCTIICLYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQ 920
I CLYVDDL+ G+N + ++ K + F+M D+G LGI++ + DNGI + Q
Sbjct: 1024 DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQ 1083
Query: 921 SHYVEKILRKYNYFYCKPASTPCDPSVKLF-KNTGDSVRQTEYASIIGSLRYATDCTRPD 979
Y +++L+K+ P TP + +KL K G+ V T + S++GSLRY T CTRPD
Sbjct: 1084 EGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLT-CTRPD 1142
Query: 980 ISYAVGLLCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLS 1038
I YAVG++ ++ P+ H++A +R++RY+K T+ GLHY L GYSD+DW
Sbjct: 1143 ILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDV 1202
Query: 1039 DDSKATSGYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLW 1098
DD K+TSG++F I A +W SKKQ I+ ST E+E +A + A WLR LL E+ L
Sbjct: 1203 DDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLP 1262
Query: 1099 ERPLPAVLIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLA 1158
+ + + D+ +AIA +N ++ + + I ++ IRE +S V++++V+T++ +A
Sbjct: 1263 QEEPTKIFV--DNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVA 1320
Query: 1159 DPLTKGLNREKVANTSSRMGL 1179
D TK L RE S +G+
Sbjct: 1321 DIFTKPLKREDFIKMRSLLGV 1341
>At4g03810 putative retrotransposon protein
Length = 964
Score = 605 bits (1561), Expect = e-173
Identities = 347/962 (36%), Positives = 541/962 (56%), Gaps = 37/962 (3%)
Query: 250 LILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTITKNGIFVGKGYATDGMFKLNID 309
L LK+ + P I KN++S L+ GF SI + ++ +F G +G+ LN
Sbjct: 3 LELKNCYYVPAINKNIISVSCLDMEGFHFSIKNKCCSFDRDDMFYGSAPLDNGLHVLNQS 62
Query: 310 MN--KISSSAYMLCDFN---IWHSRLCHVNKRIISNMSGLGLIPKISLNDFEKCQFCSQA 364
M I + + D N +WH RL H+N++ I + GL+ +E C+ C
Sbjct: 63 MPIYNIRTKKFKSNDLNPTFLWHCRLGHINEKHIQKLHSDGLLNSFDYESYETCESCLLG 122
Query: 365 KINKESHKSVT-RITEPFELIHSDLCELDGNLTRNGKRYFITFIDDCSDYTHVYLMRNKN 423
K+ K + R ++ LIH+D+C R +YFITF DD S Y +VYLM++K+
Sbjct: 123 KMTKAPFTGHSERASDLLGLIHTDVCGPMSTSARGNYQYFITFTDDFSRYGYVYLMKHKS 182
Query: 424 EALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHETTAPYSPEMNG 483
++ + FK++ E++NQF IK RSDRG EY S +F+++ +E GI+ + T P +P+ NG
Sbjct: 183 KSFENFKEFQNEVQNQFGKSIKALRSDRGGEYLSQVFSDHLRECGIVSQLTPPGTPQWNG 242
Query: 484 KAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRVPKTKNKISPYEILKKRQPN 543
+ER+NRT ++V + M ++ +WG L T ++LNR P + +PYEI + PN
Sbjct: 243 VSERRNRTLLDMVRSMMSHTDLPSPFWGYALETSAFMLNRCPSKSVEKTPYEIWTGKVPN 302
Query: 544 LSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLKSKTIIESNDVDF 603
LS+ + WGC +Y ++ KL ++ +C F+GY +K Y FY + + F
Sbjct: 303 LSFLKIWGCESYAKRLITD--KLGPKSDKCYFVGYPKETKGYYFYHPTDNKVFVVRNGAF 360
Query: 604 YENKFPFKSGDSGGNSGGTDNSVLDQPSEIITSNENIERD---VIEP-------GRGKRA 653
E +F K G SG S V + ++ TS E + D V+EP R +R+
Sbjct: 361 LEREFLSK-GTSG--SKVLLEEVREPQGDVPTSQEEHQLDLRRVVEPILVEPEVRRSERS 417
Query: 654 RIAKEYGPEYVA-----YTIEED-PSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLT 707
R + ++V + IE D P+S +EAL D+D W EA EM+S+ N+ W L
Sbjct: 418 RHEPDRFRDWVMDDHALFMIESDEPTSYEEALMGPDSDKWLEAAKSEMESMSQNKVWTLV 477
Query: 708 DLPPGCKTIGCKWILKKKLKPDGSIDKYKARLVAKGFRQRENVDFFDTYSPVTRITSIRV 767
DLP G K I CKWI KKK+ DG+I YKA LVAKG++Q +D+ +TYSPV + SIR+
Sbjct: 478 DLPDGVKPIECKWIFKKKIDMDGNIQIYKAGLVAKGYKQVHGIDYDETYSPVAMLKSIRI 537
Query: 768 LISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQA 827
L++ AA ++ + QMDVKTAFLNG LEE +YM QPEGF + KVCKL +S+YGLKQA
Sbjct: 538 LLATAAHYDYEIWQMDVKTAFLNGNLEEHVYMTQPEGFTVPEAARKVCKLHRSIYGLKQA 597
Query: 828 PKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTIICLYVDDLLIFGSNLNAIKDVKS 887
+ W+ +F+ + E +F NE + C+Y K + + LYVDD+L+ G+++ ++ VK+
Sbjct: 598 SRSWNLRFNEAIKEFDFIRNEEEPCVYKKTSGSAVAFLVLYVDDILLLGNDIPLLQSVKT 657
Query: 888 LLCHNFDMKDLGKADVILGIKI--TRTDNGISLNQSHYVEKILRKYNYFYCKPASTPCDP 945
L F MKD+G+A ILGI+I R + I L+Q Y++K+L ++N K P
Sbjct: 658 WLGSCFSMKDMGEAAYILGIRIYRDRLNKIIGLSQDTYIDKVLHRFNMHDSKKGFIPMSH 717
Query: 946 SVKLFK-------NTGDSVRQTEYASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEH 998
+ L K + + + + YAS IGS+ YA TRPD++ A+ + ++ S P H
Sbjct: 718 GITLSKTQCPSTHDERERMSKIPYASAIGSIMYAMLYTRPDVACALSMTSRYQSDPGESH 777
Query: 999 WQAIERVMRYLKKTMTLGLHY-QRYPAVLEGYSDADWNNLSDDSKATSGYIFSIAGGAVS 1057
W + + +YL++T L Y V+ GY+DA + DD ++ SG+ F + GGAVS
Sbjct: 778 WIVVRNIFKYLRRTKDKFLVYGGSEELVVSGYTDASFQTDKDDFRSQSGFFFCLNGGAVS 837
Query: 1058 WKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAAIAK 1117
WKS KQ+ +A ST E+E IA + A++E W+R ++E+ + + ++CD+ AIA+
Sbjct: 838 WKSTKQSTVADSTTEAEYIAASEAAKEVVWIRKFITELGVVPSISGPIDLYCDNNGAIAQ 897
Query: 1118 IENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGLNREKVANTSSRM 1177
+ + K + I+R++ IRE + G V++ V T+ N+AD TK L + K + ++ +
Sbjct: 898 AKEPKSHQKSKHIQRRYHLIREIIDRGDVKISRVSTDANVADHFTKPLPQPKHESHTTAI 957
Query: 1178 GL 1179
G+
Sbjct: 958 GI 959
>At1g37110
Length = 1356
Score = 594 bits (1531), Expect = e-169
Identities = 396/1254 (31%), Positives = 629/1254 (49%), Gaps = 103/1254 (8%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
M +++ E +I E+ + + + E+ Q +I++ LP + K L++ K +
Sbjct: 135 MVSTMTIDQNVDEFLRIVAELGSLEIQVDEEVQAILILNSLPASHIQLKHTLKYGNKTLT 194
Query: 61 LESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPA--GKPFKNQNRPMNKNS 118
++ + + + E +E E V + K AVL G+P N+ +
Sbjct: 195 VQDVTSSAKSLE----RELAEAVDL-------DKGQAAVLYTTERGRPLVRNNQKGGQGK 243
Query: 119 NRNKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKCRNRTNRPAQAHMATDAAPDE 178
R+++ NS+ ++ C+ C + H+ + C +R + E
Sbjct: 244 GRSRS--NSKTKVP------------CWYCKKEGHVKKDCYSRKKKMESEGQGEAGVITE 289
Query: 179 PYV-AMITEINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLLGDSHSTDVVGI 237
V + +N D W +D+G + H+ RD F ++ + +LLGD HS + G
Sbjct: 290 KLVFSEALSVNEQMVKDLWILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQ 349
Query: 238 GDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTITKNGIFVGKG 297
G I + IL++V + P +R+NL+S L+K G+ G KN +G
Sbjct: 350 GTIRIDTHGGTIKILENVKYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTALRG 409
Query: 298 YATDGMFKLNID--MNKISSSAYMLCDFNIWHSRLCHVNKRIISNMSGLGLIPKISLNDF 355
++G++ L+ M+++ ++ +WHSRL H++ + ++G GLI + +N+
Sbjct: 410 SLSNGLYVLDGSTVMSELCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINEL 469
Query: 356 EKCQFCSQAKINKESHKSVTRITEP-FELIHSDLCELDGNLTRN--GKRYFITFIDDCSD 412
E C+ C K K S +E +H+DL N+T + GK+YF++ IDD +
Sbjct: 470 EFCEHCVMGKSKKVSFNVGKHTSEDALSYVHADLWG-SPNVTPSISGKQYFLSIIDDKTR 528
Query: 413 YTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHE 472
+Y +++K+E D F ++ +ENQ N ++K R+D G E+ + F+ Y KE GI
Sbjct: 529 KVWLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERH 588
Query: 473 TTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRVPKTK-NKI 531
T Y+P+ NG AER NRT E V + SG +W E T Y++NR P + N
Sbjct: 589 RTCTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHN 648
Query: 532 SPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLK 591
P E+ R+P + R +G +AYV + K L RA + F+GY +K Y+ + L+
Sbjct: 649 VPEEMWLNRKPGYKHLRKFGSIAYVHQDQGK---LKPRALKGFFLGYPAGTKGYKVWLLE 705
Query: 592 SKTIIESNDVDFYE-----------------------------NKFPFKSGDSGGNSGGT 622
+ + S +V F E NKF SG G +
Sbjct: 706 EEKCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQS 765
Query: 623 DNSVLDQPSEIITSNENIE--------------------RDVIEPGRGKRARIAKEYGPE 662
D+ + + + S E +E RD + R +E
Sbjct: 766 DSEPITEGEQSSDSEEEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVT 825
Query: 663 YVAYTIE----EDPSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLTDLPPGCKTIGC 718
+ +E ++P S +EA+ S D + W A +DEMDSLM N TW L D P K IGC
Sbjct: 826 FALVVVENCIVQEPQSYQEAMESQDCEKWDMATHDEMDSLMKNGTWDLVDKPKDRKIIGC 885
Query: 719 KWILKKKLK-PDGSIDKYKARLVAKGFRQRENVDFFDTYSPVTRITSIRVLISLAAIHNL 777
+W+ K K P ++KARLVAKG+ QRE VD+ + ++PV + SIR+L+SL +L
Sbjct: 886 RWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAPVVKHVSIRILMSLVVDKDL 945
Query: 778 IVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQAPKQWHEKFDN 837
+ QMDVKT FL+G+LEEE+YM+QPEGFV ENKVC+L KSLYGLKQ+P+QW+++FD
Sbjct: 946 ELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLKKSLYGLKQSPRQWNKRFDR 1005
Query: 838 LMIENEFKVNESDKCIYSKY-ENNTCTIICLYVDDLLIFGSNLNAIKDVKSLLCHNFDMK 896
M +F +E D C+Y K+ + + LYVDD+LI G++ I VK L F+MK
Sbjct: 1006 FMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGASKAEINRVKEQLSTEFEMK 1065
Query: 897 DLGKADVILGIKITRTDNG--ISLNQSHYVEKILRKYNYFYCKPASTPCDPSVKLFK-NT 953
D+G A ILGI I R G + L+Q Y+ K+L ++N K + P KL
Sbjct: 1066 DMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSGAKMTNAPVGAHFKLAAVRE 1125
Query: 954 GDSVRQTE---YASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEHWQAIERVMRYLK 1010
D T+ Y+S +GS+ YA TRPD++YA+ L+ ++ S+P HW+A++ VMRYLK
Sbjct: 1126 EDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYMSKPGSMHWEAVKWVMRYLK 1185
Query: 1011 KTMTLGLHY-QRYPAVLEGYSDADWNNLSDDSKATSGYIFSIAGGAVSWKSKKQTILAQS 1069
L L + + + GY D+++ D ++ SGY+F+I G VSWK+ Q ++A S
Sbjct: 1186 GAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFTIGGNTVSWKASLQPVVAMS 1245
Query: 1070 TMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAAIAKIENRYYNGKRRQ 1129
T E+E IALA A++EA W++ LL ++ + + V I CDS +AI +N Y+ + +
Sbjct: 1246 TTEAEYIALAEAAKEAMWIKGLLQDMGMQQ---DKVKIWCDSQSAICLSKNSVYHERTKH 1302
Query: 1130 IRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGLNREKVANTSSRMGLMPID 1183
I + + IR+ + +G V V + T+ N D LTK + K + + LM D
Sbjct: 1303 IDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKFKSALGVLKLMKWD 1356
>At3g25450 hypothetical protein
Length = 1343
Score = 575 bits (1481), Expect = e-164
Identities = 351/1046 (33%), Positives = 555/1046 (52%), Gaps = 64/1046 (6%)
Query: 193 SDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLLGDSHSTDVVGIGDIELKFTSEKTLIL 252
++ W++D GAS H+ +R F KV GD ++ G G I + IL
Sbjct: 289 NNAWYLDNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKIL 348
Query: 253 KDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTI--TKNGIFVGKGYATDGMFKLNIDM 310
DV + P ++ N++S ++G + D T+ + + + + + ++K+++++
Sbjct: 349 FDVYYIPDLKSNILSLGQATESGCDIRMREDYLTLHDREGNLLIKAQRSRNRLYKVSLEV 408
Query: 311 NKISSSAYMLCDFN---IWHSRLCHVNKRIISNMSGLGLIPKISLNDFEKCQFCSQAKIN 367
+S L N IWH+RL H++ I M L+ IS + ++ + C
Sbjct: 409 E--NSKCLQLTTTNESTIWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCLFG 466
Query: 368 KESHKSVTRIT-----EPFELIHSDLCELDGNLTRNGKRYFITFIDDCSDYTHVYLMRNK 422
K++ S + T + ELIH DLC T KRY IDD S Y L++ K
Sbjct: 467 KQARHSFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLKEK 526
Query: 423 NEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHETTAPYSPEMN 482
+EA FK++ +E + IK FR+DRG E+ SH F E+ + GI TAPY+P+ N
Sbjct: 527 SEAFGKFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQN 586
Query: 483 GKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRV-PKTKNKISPYEILKKRQ 541
G ER+NRT + + + + + WGE + Y++NRV ++ + +PYE+ K ++
Sbjct: 587 GVVERRNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHKK 646
Query: 542 PNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLKSKTIIESNDV 601
PN+ + R +GC++Y + P KL R+ ++G SKAYR D + I S DV
Sbjct: 647 PNVEHLRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRDV 706
Query: 602 DFYENKFPFKSGDSG----------------GNSGGTDNSVLDQP-----SEIITSNENI 640
F EN+ S GN+G T+N + +P +EI +ENI
Sbjct: 707 VFDENRSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDENI 766
Query: 641 ----------------------ERDVIEPGRGKRARIAKEYGPEYVAYTIEEDPSSIKEA 678
+R VI P K + E E++ + ++P KEA
Sbjct: 767 IEEAETEEHDQSQEEPQPVRRSQRQVIRPNYLKDYVLCAEIEAEHLLLAVNDEPWDFKEA 826
Query: 679 LSSIDADLWQEAINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKAR 738
S + W++A +E+ S+ N TW L DLP G K IG KW+ K K DGSI+KYKAR
Sbjct: 827 NKSKE---WRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSDGSINKYKAR 883
Query: 739 LVAKGFRQRENVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIY 798
LVAKG+ QR VDF + ++PV RI ++R++I+LAA + +H +DVKTAFL+GEL E++Y
Sbjct: 884 LVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFLHGELREDVY 943
Query: 799 MDQPEGFVIHGQENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYE 858
+ QPEGF + KV KL K+LYGL+QAP+ W+ K + ++ E +F+ + +Y K E
Sbjct: 944 VSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHKEPSLYRKQE 1003
Query: 859 NNTCTIICLYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISL 918
++ +YVDDLL+ GSNL+ I + K + F+M DLGK LGI++ ++ +GI+L
Sbjct: 1004 GENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEVLQSKDGITL 1063
Query: 919 NQSHYVEKILRKYNYFYCKPASTPCDPSVKLFKNTGDS-VRQTEYASIIGSLRYATDCTR 977
Q Y +KIL + C +TP S++L K + + +T+Y IG LRY TR
Sbjct: 1064 KQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGCLRYLLH-TR 1122
Query: 978 PDISYAVGLLCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQR-YPAVLEGYSDADWNN 1036
PD+SY VG+L ++ P H A+++++RYL+ T + GL++++ A L GYSD+ N
Sbjct: 1123 PDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIGYSDSSHNV 1182
Query: 1037 LSDDSKATSGYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIP 1096
DD K+T G+IF + ++W S+KQ ++ S+ E+E +A A+++A WL+ LL+E+
Sbjct: 1183 DLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWLQELLAEVI 1242
Query: 1097 LWERPLPAVLIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNEN 1156
E V I D+ +AIA +N ++G+ + I R++ IRE + NG + V+ V
Sbjct: 1243 GTE--CEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEVEHVPGVRQ 1300
Query: 1157 LADPLTKGLNREKVANTSSRMGLMPI 1182
AD LTK L + K +G+ +
Sbjct: 1301 KADILTKALGKIKFLEMRELIGVQGV 1326
>At3g60170 putative protein
Length = 1339
Score = 563 bits (1452), Expect = e-160
Identities = 341/1092 (31%), Positives = 563/1092 (51%), Gaps = 66/1092 (6%)
Query: 145 CYNCGQADHMARKCRNRTNRPAQAHMATDAAPDEPYVAMITEINMIAGSDGWWVDTGASR 204
CY C H +C A + + +E + E N + W++D+G S
Sbjct: 252 CYKCHNLGHFQYECPEWEKNANYAELEEE---EELLLMAYVEQNQANRDEVWFLDSGCSN 308
Query: 205 HVCYDRDMFKTYTACDDQKVLLGDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKN 264
H+ ++ F ++ V LG+ VVG G +++K T ++ +V + P++R N
Sbjct: 309 HMTGSKEWFSELEEGFNRTVKLGNDTRMSVVGKGSVKVKVNGV-TQVIPEVYYVPELRNN 367
Query: 265 LVSGFLLNKAGFTQSIG---ADLYTITKNGIFVGKGYATDGMFKLNIDMNK----ISSSA 317
L+S L + G I +Y +K I F L K + +
Sbjct: 368 LLSLGQLQERGLAILIRDGTCKVYHPSKGAIMETNMSGNRMFFLLASKPQKNSLCLQTEE 427
Query: 318 YMLCDFNIWHSRLCHVNKRIISNMSGLGLIPKISLNDFEK--CQFCSQAKINKESHKSVT 375
M + ++WH R H+N+ + ++ ++ + + K C C K ++ES T
Sbjct: 428 VMDKENHLWHCRFGHLNQEGLKLLAHKKMVIGLPILKATKEICAICLTGKQHRESMSKKT 487
Query: 376 --RITEPFELIHSDLCELDGNLTRNGKRYFITFIDDCSDYTHVYLMRNKNEALDIFKQYV 433
+ + +L+HSD+C ++ +GKRY ++FIDD + T VY + K+EA FK +
Sbjct: 488 SWKSSTQLQLVHSDICGPITPISHSGKRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFK 547
Query: 434 KEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHETTAPYSPEMNGKAERKNRTFT 493
+E + + R+DRG E+ S+ F E+ + GI + TA ++P+ NG AERKNRT
Sbjct: 548 ASVEKEIGAFLTCLRTDRGGEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIM 607
Query: 494 ELVVATMLNSGAAPHWWGEILLTVCYVLNRVPKTKNK-ISPYEILKKRQPNLSYFRTWGC 552
V + + +W E ++ NR P + ++P E R+P + YFR +GC
Sbjct: 608 NAVRSMLSERQVPKMFWSEATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGC 667
Query: 553 LAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLKSKTIIESNDVDFYENK----- 607
+ YV PD KR KL ++ +C F+G + SKA+R YD K I+ S DV F E+K
Sbjct: 668 IGYVHIPDQKRSKLDDKSKKCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWD 727
Query: 608 --------FPFKSGD---------------SGGNSGGTDNSVLDQPSEIITSNE------ 638
+ GD + N G+DN+V P +S
Sbjct: 728 QADVEAKEVTLECGDEDDEKNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAA 787
Query: 639 NIERDVIEPG------RGKRARIAKEYGPEYVAYTIEEDPSSIKEALSSIDADLWQEAIN 692
+ R+ PG G+ I + + E DP +A+ +W+EA+
Sbjct: 788 KVTRERRPPGWMADYETGEGEEIEENLSVMLLMMMTEADPIQFDDAVKD---KIWREAME 844
Query: 693 DEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLVAKGFRQRENVDF 752
E++S++ N TW LT LP G IG KW+ K KL DG +DKYKARLVAKG+ Q +D+
Sbjct: 845 HEIESIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDY 904
Query: 753 FDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQEN 812
+ ++PV R+ ++R ++++++ N + Q+DVK+AFL+GEL+EE+Y+ QPEGF+ G+E
Sbjct: 905 TEVFAPVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEE 964
Query: 813 KVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTIICLYVDDL 872
KV KL K+LYGLKQAP+ W+ + + ++ EF+ S+ +++K I+ LYVDDL
Sbjct: 965 KVYKLRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDL 1024
Query: 873 LIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQSHYVEKILRKYN 932
+ GS+ + K + F+M DLGK LGI++ ++D GI + Q Y ++L ++
Sbjct: 1025 IFTGSDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFG 1084
Query: 933 YFYCKPASTPCDPSVKLFKN-TGDSVRQTEYASIIGSLRYATDCTRPDISYAVGLLCKFT 991
P P KL K+ G+ V +T + ++GSL Y T TRPD+ Y V L+ +F
Sbjct: 1085 MDESNAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLT-VTRPDLMYGVCLISRFM 1143
Query: 992 SRPSMEHWQAIERVMRYLKKTMTLGLHYQR---YPAVLEGYSDADWNNLSDDSKATSGYI 1048
S P M HW A +R++RYLK T+ LG+ Y+R L ++D+D+ +D ++TSG++
Sbjct: 1144 SNPRMSHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFV 1203
Query: 1049 FSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIH 1108
F +A GA+ W SKKQ ++A ST E+E IA A + + WLR +L ++ E+ A +I+
Sbjct: 1204 FLMASGAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEK--SATVIN 1261
Query: 1109 CDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGLNRE 1168
CD+++ I ++ +GK + I + +R+ ++ V++++ T + +AD TK L E
Sbjct: 1262 CDNSSTIQLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLE 1321
Query: 1169 KVANTSSRMGLM 1180
+ + +G++
Sbjct: 1322 QFEKLRALLGMV 1333
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 563 bits (1452), Expect = e-160
Identities = 398/1246 (31%), Positives = 632/1246 (49%), Gaps = 114/1246 (9%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
MS++ SVE E QI ++ + + ++ Q +++ LP A+ K L++ S
Sbjct: 127 MSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLKYS----S 182
Query: 61 LESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNSNR 120
+S++T ++E A E + K + G +K KN+N+ K +
Sbjct: 183 GKSILT---LDEVAAAIYSKELELGSVKKSIKVQAEGLYVKD-----KNENK--GKGEQK 232
Query: 121 NKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKCRNRTNRP--------------A 166
K G + + ++ P C+ CG+ H C N+ N+P
Sbjct: 233 GK-GKGKKGKSKKKP--------GCWTCGEEGHFRSSCPNQ-NKPQFKQSQVVKGESSGG 282
Query: 167 QAHMATDAAPDEPYVAMITEINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLL 226
+ ++A A TE+++ D W +DTG S H+ Y R+ F + V +
Sbjct: 283 KGNLAEAAGYYVSEALSSTEVHL---EDEWILDTGCSYHMTYKREWFHEFNEDAGGSVRM 339
Query: 227 GDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYT 286
G+ + V G+G I +K + T++L +V + P + +NL+S KAG+ +
Sbjct: 340 GNKTVSRVRGVGTIRVKNSDGLTIVLTNVRYIPDMDRNLLSLGTFEKAGYKFESEDGILR 399
Query: 287 ITKNGIFVGKGYATDGMFKLNIDMNKISSSAYM--LCDFNIWHSRLCHVNKRIISNMSGL 344
I + G D ++ LN S A + D +WH RLCH++++ + +
Sbjct: 400 IKAGNQVLLTGRRYDTLYLLNWKPVASESLAVVKRADDTVLWHQRLCHMSQKNMEILVRK 459
Query: 345 GLIPKISLNDFEKCQFCSQAKINKESHKSVTRIT-EPFELIHSDLCELDGNLTRNGK-RY 402
G + K ++ + C+ C K ++S T E E IHSDL GK +Y
Sbjct: 460 GFLDKKKVSSLDVCEDCIYGKAKRKSFSLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQY 519
Query: 403 FITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNE 462
F++ IDD + VY M+ K+EA + F ++V +ENQ + R+K R+D G E+ + +F+
Sbjct: 520 FMSIIDDFTRKVWVYFMKTKDEAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDG 579
Query: 463 YYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLN 522
+ + +GI T Y+P+ NG AER NRT E V + + +SG +W E T ++N
Sbjct: 580 FCESIGIHRHRTCAYTPQQNGVAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLIN 639
Query: 523 RVPKTK-NKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALN 581
+ P + N P + P SY R +GC+A+V D K L RA + IGY +
Sbjct: 640 KTPSSALNFEIPDKKWSGNPPVYSYLRRYGCVAFVHTDDGK---LEPRAKKGVLIGYPVG 696
Query: 582 SKAYRFYDLKSKTIIESNDVDFYEN-----------KFPFKSGDSGGN------------ 618
K Y+ + L + + S ++ F EN + D G+
Sbjct: 697 VKGYKVWILDERKCVVSRNIIFQENAVYKDLMQRQENVSTEEDDQTGSYLEFDLEAERDV 756
Query: 619 -SGGTDNSVLDQP---SEIITS------NENIERDVIEP--------GRGKRA-RIAKEY 659
SGG V P S ++++ N++ + DV + R KR R + +
Sbjct: 757 ISGGDQEMVNTIPAPESPVVSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREIRAPRRF 816
Query: 660 GPE-YVA---YTIEE----DPSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLTDLPP 711
E Y A YT E+ +P + ++A + D W+ A+++E+DS N TW + P
Sbjct: 817 DDEDYYAEALYTTEDGEAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPE 876
Query: 712 GCKTIGCKWILKKKLKPDGSID-KYKARLVAKGFRQRENVDFFDTYSPVTRITSIRVLIS 770
+ IGC+WI K KL G + ++KARLVAKG+ Q+E +D+ + ++PV + SIRVL+S
Sbjct: 877 NQRIIGCRWIFKYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLS 936
Query: 771 LAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQAPKQ 830
+ A +L + Q+DVKTAFL+GEL+E+IYM PEG+ + N+VC L+K+LYGLKQAPKQ
Sbjct: 937 IVAQEDLELEQLDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQ 996
Query: 831 WHEKFDNLMIENEFKVNESDKCIYSK-YENNTCTIICLYVDDLLIFGSNLNAIKDVKSLL 889
W+EKFDN M E F + D C Y+K + + + +YVDD+L+ N AI +K+ L
Sbjct: 997 WNEKFDNFMKEICFVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANL 1056
Query: 890 CHNFDMKDLGKADVILGIKI--TRTDNGISLNQSHYVEKILRKYNYFYCKPASTPCDPSV 947
F+MKDLG A ILG++I RT + L+Q Y+ KIL YN KPA TP
Sbjct: 1057 GMRFEMKDLGAAKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHF 1116
Query: 948 KLFKNT-------GDSVRQTEYASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEHWQ 1000
K T D ++ Y+S +GS+ YA TRPD++Y VG++ +F S+P EHW
Sbjct: 1117 KFQAATEQKLIRDEDFMKSVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWL 1176
Query: 1001 AIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLSDDSKATSGYIFSIAGGAVSWK 1059
++ V+RY+K T+ L Y++ + + GY DAD+ D ++ +G +F++ G +SWK
Sbjct: 1177 GVKWVLRYIKGTLKTRLCYKKSSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWK 1236
Query: 1060 SKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAAIAKIE 1119
S Q ++AQST ESE ++L A +EA WL+ LL + ++ +V I CDS +AIA +
Sbjct: 1237 SGLQRVVAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQK---SVEIFCDSQSAIALSK 1293
Query: 1120 NRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGL 1165
N ++ + + I K+ IRE +S+GTV V + T +N AD TK L
Sbjct: 1294 NNVHHERTKHIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVL 1339
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 562 bits (1448), Expect = e-160
Identities = 379/1246 (30%), Positives = 617/1246 (49%), Gaps = 114/1246 (9%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
M ++K ++ + +I ++ + + ++ Q +++ LP + +++
Sbjct: 102 MQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSNSREK 161
Query: 61 LESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNSNR 120
L + ++ R+ QN V + G+P N NK NR
Sbjct: 162 LRLDDVMVAARDKERELSQNNRPVVEGHF------------ARGRPDGKNNNQGNKGKNR 209
Query: 121 NKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKC-----RNRTNRPA----QAHMA 171
+++ + ++ C+ CG+ H ++C RN++ + ++ +A
Sbjct: 210 SRSKSADGKRV-------------CWICGKEGHFKKQCYKWIERNKSKQQGSDNGESSLA 256
Query: 172 TDAAPDEPYVAMITEINMIAGSDG----WWVDTGASRHVCYDRDMFKTYTACDDQKVLLG 227
P + ++ + +D W +DTG S H+ +D FK + V +G
Sbjct: 257 KSTEAFNPAMVLLATDETLVVTDSIANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMG 316
Query: 228 DSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTI 287
+ + V GIG I+++ + +IL DV + P + +NL+S L G + I
Sbjct: 317 NDTYSPVKGIGSIKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKI 376
Query: 288 TKNGIFVGKGYATDGMFKLN--IDMNKISSSAYMLCDFNIWHSRLCHVNKRIISNMSGLG 345
K + KG D ++ L+ + + SSA + + +WHSRL H++++ + + G
Sbjct: 377 VKGCSTILKGQKRDTLYILDGVTEEGESHSSAEVKDETALWHSRLGHMSQKGMEILVKKG 436
Query: 346 LIPKISLNDFEKCQFCSQAKINKESHKSVTRIT-EPFELIHSDLCELDGNLTRNGK-RYF 403
+ + + + E C+ C K ++ S +T E +HSDL N G +YF
Sbjct: 437 CLRREVIKELEFCEDCVYGKQHRVSFAPAQHVTKEKLAYVHSDLWGSPHNPASLGNSQYF 496
Query: 404 ITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEY 463
I+F+DD S +Y +R K+EA + F ++ K +ENQ + ++K+ R+D G EY +H F ++
Sbjct: 497 ISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKF 556
Query: 464 YKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNR 523
KE GI+ T Y+P+ NG AER NRT + V + + SG +W E T Y++NR
Sbjct: 557 CKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINR 616
Query: 524 VPKTK-NKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNS 582
P T N P E P+LS R +GCLAY+ K L R+ + F Y
Sbjct: 617 SPSTAINFDLPEEKWTGALPDLSSLRKFGCLAYIHADQGK---LNPRSKKGIFTSYPEGV 673
Query: 583 KAYRFYDLKSKTIIESNDVDFYEN-KFPFKSGDSGG------------NSGGTDNSVLDQ 629
K Y+ + L+ K + S +V F E F GDS N D DQ
Sbjct: 674 KGYKVWVLEDKKCVISRNVIFREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQ 733
Query: 630 ---------PSEIITSN---------------ENIERDVIEPGRG-----KRARIAKEYG 660
PSE TS+ E + D +E R R +
Sbjct: 734 GGATQDNSNPSEATTSHNPVLNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKAN 793
Query: 661 PEY-------VAYTIEED----PSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLTDL 709
P+Y AY E+D P S +EAL D + W A+ +EM S+ N TW L
Sbjct: 794 PKYNESNMVGFAYYSEDDGKPEPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTK 853
Query: 710 PPGCKTIGCKWILKKKLK-PDGSIDKYKARLVAKGFRQRENVDFFDTYSPVTRITSIRVL 768
P K IGC+W+ +K P ++ ARLVAKGF Q+E VD+ + +SPV + SIR L
Sbjct: 854 PEKVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYL 913
Query: 769 ISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQAP 828
+S+ +N+ + QMDVKTAFL+G LEEEIYM QPEGF I NKVC L +SLYGLKQ+P
Sbjct: 914 LSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSP 973
Query: 829 KQWHEKFDNLMIENEFKVNESDKCIY-SKYENNTCTIICLYVDDLLIFGSNLNAIKDVKS 887
+QW+ +FD M ++ + D C+Y K +T + LYVDD+LI +N + + ++K
Sbjct: 974 RQWNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQ 1033
Query: 888 LLCHNFDMKDLGKADVILGIKITRTDNG--ISLNQSHYVEKILRKYNYFYCKPASTPCDP 945
LL F+MKDLG A ILG++I+R + ++L+Q YV+K+LR + KP STP
Sbjct: 1034 LLSREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGI 1093
Query: 946 SVKL-------FKNTGDSVRQTEYASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEH 998
KL ++ + ++ YA+ IGS+ Y+ TRPD++Y++G++ +F S+P +H
Sbjct: 1094 HFKLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDH 1153
Query: 999 WQAIERVMRYLKKTMTLGLHYQRY-PAVLEGYSDADWNNLSDDSKATSGYIFSIAGGAVS 1057
WQA++ V+RY++ T L +++ +L GY D+D+ + D ++ +GY+F++ G +S
Sbjct: 1154 WQAVKWVLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTIS 1213
Query: 1058 WKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAAIAK 1117
WKSK Q ++A S+ E+E +AL A +EA WL+ +E+ V +H DS +AI
Sbjct: 1214 WKSKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAEL---GHSQDYVEVHSDSQSAITL 1270
Query: 1118 IENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTK 1163
+N ++ + + I + IR+ + G ++V + T N A+ TK
Sbjct: 1271 AKNSVHHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTK 1316
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 551 bits (1420), Expect = e-157
Identities = 379/1254 (30%), Positives = 613/1254 (48%), Gaps = 109/1254 (8%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEF- 59
M D+ +++ + +L + ++ G I I+ LP + S+L +T++
Sbjct: 127 MYDNDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLE-QTRDLD 185
Query: 60 --SLESLITRLRIEEE---ARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPM 114
++ L+ L+ +E AR++ E F V + + +G N N +
Sbjct: 186 ALTMSELLGILKAQEARVTAREESTKEGAFYVRSKG----------RESGFKQDNTNNRV 235
Query: 115 NKNSNR---NKTGNNSRPQIQQPPKND-----AAPPFNCYNCGQADHMARKCRNRTNRPA 166
N++ +K+ ++ + ++ PKND CY CG+ H A +CR++ A
Sbjct: 236 NQDKKWCGFHKSSKHTEEECREKPKNDDHGKNKRSNIKCYKCGKIGHYANECRSKNKERA 295
Query: 167 QAHMAT-DAAPDEPYVAMITEINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVL 225
+ D D + E + D W VD+G + H+ + F +
Sbjct: 296 HVTLEEEDVNEDHMLFSASEEESTTLREDVWLVDSGCTNHMTKEERYFSNINKSIKVPIR 355
Query: 226 LGDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLY 285
+ + G GDI + T I+K+V P + KNL+S + +G+
Sbjct: 356 VRNGDIVMTAGKGDITV-MTRHGKRIIKNVFLVPGLEKNLLSVPQIISSGYWVRFQDKRC 414
Query: 286 TITK-NGIFVGKGYATDGMFKLNIDMNKISSSAYMLCDFNIWHSRLCHVNKRIISNMSGL 344
I NG + TD FK+ + + + + WH RL HV+ + + M
Sbjct: 415 IIQDANGKEIMNIEMTDKSFKIKLSSVEEEAMTANVQTEETWHKRLGHVSNKRLQQMQDK 474
Query: 345 GLI---PKISLNDFEKCQFCSQAKINKESH--KSVTRITEPFELIHSDLCELDGNLTRNG 399
L+ P+ + E C+ C+ K +++S +S T+ E E++H+D+C + + +G
Sbjct: 475 ELVNGLPRFKVTK-ETCKACNLGKQSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDG 533
Query: 400 KRYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHI 459
RY++ F+DD + VY ++ K+E FK++ +E Q N IK R
Sbjct: 534 SRYYVLFLDDYTHMCWVYFLKQKSETFATFKKFKALVEKQSNCSIKTLRP---------- 583
Query: 460 FNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCY 519
+ ++ GI + T PYSP+ NG AERKNR+ E+ + ++ W E + T Y
Sbjct: 584 MEVFCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAY 643
Query: 520 VLNRVPKT--KNKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIG 577
+ NR+P ++ ++P E +PN+S+ R +G + YV PD KR KL ++A IG
Sbjct: 644 LQNRLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIG 703
Query: 578 YALNSKAYRFYDLKSKTIIESNDVDFYENK-------------FPFKSGD---------- 614
Y+ +K YR + L+ + + S DV F E+K F D
Sbjct: 704 YSNQTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQET 763
Query: 615 -----------SGGNSGGTDNSVLDQPSEIITSNENIERDVIE-PGRGKRARIAKEYGP- 661
+ G T + VL Q N+ ER+ E P + K + E P
Sbjct: 764 SSHDLSQIDDHANNGEGETSSHVLSQV------NDQEERETSESPKKYKSMKEILEKAPR 817
Query: 662 ---EYVAYTIE------EDPSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLTDLPPG 712
+ A IE E+P + EA + W+EA+N+E+ + N TW L D P
Sbjct: 818 MENDEAAQGIEACLVANEEPQTYDEARGDKE---WEEAMNEEIKVIEKNRTWKLVDKPEK 874
Query: 713 CKTIGCKWILKKKLKPDGSIDKYKARLVAKGFRQRENVDFFDTYSPVTRITSIRVLISLA 772
I KWI K K G+ K+KARLVA+GF Q +D+ +T++PV+R +IR L++ A
Sbjct: 875 KNVISVKWIYKIKTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYA 934
Query: 773 AIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQAPKQWH 832
A ++QMDVK+AFLNGELEEE+Y+ QP GFVI G+E KV +L K+LYGLKQAP+ W+
Sbjct: 935 AQMKWRLYQMDVKSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWY 994
Query: 833 EKFDNLMIENEFKVNESDKCIYSKYENNTCTIICLYVDDLLIFGSNLNAIKDVKSLLCHN 892
E+ D+ I+N F + +D +YSK + I+ LYVDDL+I G+N + I K +
Sbjct: 995 ERIDSYFIQNGFARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDE 1054
Query: 893 FDMKDLGKADVILGIKITRTDNGISLNQSHYVEKILRKYNYFYCKPASTPCDPSVKLFKN 952
F+M DLG + LG+++ + D+GI L+Q Y K++ K+ K STP P K
Sbjct: 1055 FEMTDLGLLNYFLGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGV 1114
Query: 953 TGDS---VRQTEYASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEHWQAIERVMRYL 1009
GD T+Y I+G L Y +RPD+ YA L ++ S PS++H+Q +RV+RY+
Sbjct: 1115 EGDDKEFADPTKYRRIVGGLLYLC-ASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYV 1173
Query: 1010 KKTMTLG-LHYQRYPAVLEGYSDADWNNLSDDSKATSGYIFSIAGGAVSWKSKKQTILAQ 1068
K T G L + L GYSD+DW +D K+T+GY+F++ W+S KQ +AQ
Sbjct: 1174 KGTSNFGVLFTSKETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQ 1233
Query: 1069 STMESEMIALAAASEEASWLRCLLSEIPL-WERPLPAVLIHCDSTAAIAKIENRYYNGKR 1127
ST E+E IA+ AA+ +A WL+ L + L ++ +P I CD+ +AIA N + +
Sbjct: 1234 STAEAEYIAVCAATNQAIWLQRLFEDFGLKFKEGIP---ILCDNKSAIAIGRNPVQHRRT 1290
Query: 1128 RQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGLNREKVANTSSRMGLMP 1181
+ I K+ +RE G +++++ + + LAD LTK L+ + ++G+ P
Sbjct: 1291 KHIEIKYHFVREAEHKGLIQLEYCKGEDQLADVLTKALSVSRFEGLRRKLGVKP 1344
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 548 bits (1411), Expect = e-156
Identities = 332/1094 (30%), Positives = 549/1094 (49%), Gaps = 106/1094 (9%)
Query: 145 CYNCGQADHMARKCRNRTNRPAQAHMATDAAPDEPYVAMITEINMIAGSDG--WWVDTGA 202
C+ C + H +C + M D + ++ + I + W++D+G
Sbjct: 212 CFKCHKMGHYKAECPSWEKEANYVEMEED-------LLLMAHVEQIGDEEKQIWFLDSGC 264
Query: 203 SRHVCYDRDMFKTYTACDDQKVLLGDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIR 262
S H+C R+ F + Q V LGD V G G + L+ + ++ DV P ++
Sbjct: 265 SNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDG-RIQVISDVYFVPGLK 323
Query: 263 KNLVSGFLLNKAGFTQSIGADLYTI---TKNGIFVGKGYATDGMFKLNIDMNKISSSAYM 319
NL S L + G I D+ + T+ + + + MF + + K +
Sbjct: 324 NNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVFAAVKKSKETEET 383
Query: 320 LC------DFNIWHSRLCHVNKRIISNMSGLGLI---PKISLNDFEK-CQFCSQAKINKE 369
C N+WH R H+N + + +++ ++ PK L + E C C + K +E
Sbjct: 384 RCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAVCDICLKGKQIRE 443
Query: 370 S--HKSVTRITEPFELIHSDLCELDGNLTRNGKRYFITFIDDCSDYTHVYLMRNKNEALD 427
S +S + T+ +L+H+D+C + +GKRY + FIDD S YL+ K+E
Sbjct: 444 SIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCWTYLLSEKSETFQ 503
Query: 428 IFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHETTAPYSPEMNGKAER 487
FK++ E+E + ++ RSDRG EY S F+EY KE GI + TA Y+P+ NG AER
Sbjct: 504 FFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTAAYTPQQNGVAER 563
Query: 488 KNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRVP-KTKNKISPYEILKKRQPNLSY 546
KNR+ + ++ +W E + Y+LNR P K N I+P E +P++ +
Sbjct: 564 KNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPEEKWSSWKPSVEH 623
Query: 547 FRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLKSKTIIESNDVDF--- 603
R +G LAY P KR+KL ++ +C G + SKAYR YD + I+ S DV F
Sbjct: 624 LRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGKILISRDVQFDEE 683
Query: 604 ---------------YENKFPFKSGDSG---GNSGGTDNSVLDQPSEIITSNENIERDVI 645
++N +G+ G ++G D ++ E + E + +++
Sbjct: 684 RGWEWEDKSLEEELVWDNSDHEPAGEEGPEINHNGQQDQEETEEEEETVA--ETVHQNLP 741
Query: 646 EPGRG------------------KRARIAKEYGPEYVAYTI-EEDPSSIKEALSSIDADL 686
G G R I ++ E +A I +DP +EA ++
Sbjct: 742 AVGTGGVRQRQQPVWMKDYVVGNARVLITQDEEDEVLALFIGPDDPVCFEEAAQ---LEV 798
Query: 687 WQEAINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLVAKGFRQ 746
W++A+ E+ S+ N TW L +LP K IG KWI K K G +DK+KARLVAKG+ Q
Sbjct: 799 WRKAMEAEITSIEENNTWELVELPEEAKVIGLKWIFKTKFNEKGEVDKFKARLVAKGYHQ 858
Query: 747 RENVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFV 806
R VDF++ ++PV + +IR+++ LAA V Q+DVK+AFL+G+L+E+++++QP+GF
Sbjct: 859 RYGVDFYEVFAPVAKWDTIRLILGLAAEKGWSVFQLDVKSAFLHGDLKEDVFVEQPKGFE 918
Query: 807 IHGQENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTIIC 866
+ + +KV KL K+LYGLKQAP+ W+ + + + F+ + ++ K E + ++
Sbjct: 919 VEEESSKVYKLKKALYGLKQAPRAWYSRIEEFFGKEGFEKCYCEHTLFVKKERSDFLVVS 978
Query: 867 LYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQSHYVEK 926
+YVDDL+ GS++ I+ K+ + F M DLGK LG+++ + + GI +NQ Y +
Sbjct: 979 VYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDLGKMKYFLGVEVIQDERGIFINQRKYAAE 1038
Query: 927 ILRKYNYFYCKPASTPCDPSVKLFKNTGDSVRQTEYASIIGSLRYATDCTRPDISYAVGL 986
I++KY C P P KL K G
Sbjct: 1039 IIKKYGMEGCNSVKNPIVPGQKLTK--------------------------------AGA 1066
Query: 987 LCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLSDDSKATS 1045
+ ++ P+ +H A++R++RY++ T+ LG+ Y+R A L G+ D+D+ DD K+TS
Sbjct: 1067 VSRYMESPNEQHLLAVKRILRYVQGTLDLGIQYERGGATELVGFVDSDYAGDVDDRKSTS 1126
Query: 1046 GYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAV 1105
GY+F + GGA++W SKKQ I+ ST E+E ++ + + +A WLR +L EI R
Sbjct: 1127 GYVFMLGGGAIAWASKKQPIVTLSTTEAEFVSASYGACQAVWLRNVLEEIGC--RQEGGT 1184
Query: 1106 LIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGL 1165
L+ CD+++ I +N +G+ + I ++ +RE + GT+R+D+ T + +AD +TK +
Sbjct: 1185 LVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRELVKEGTIRLDYCTTTDQVADIMTKAV 1244
Query: 1166 NREKVANTSSRMGL 1179
RE RMG+
Sbjct: 1245 KREVFEELRGRMGV 1258
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 541 bits (1394), Expect = e-154
Identities = 374/1246 (30%), Positives = 621/1246 (49%), Gaps = 137/1246 (10%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
MS++ ++E ++ ++ ++ + +P++ Q V++ LP + K L++
Sbjct: 132 MSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQFDQLKETLKYCKTTLH 191
Query: 61 LESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNSNR 120
LE + + +R ++ E ++ NN+ G ++ G+ + + + NKN +R
Sbjct: 192 LEEITSAIR----SKILELGASGKLLKNNSD-----GLFVQDRGRS-ETRGKGPNKNKSR 241
Query: 121 NKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKC-----RNRTNRPAQAHMATDAA 175
+K+ + C+ CG+ H ++C RN+ ++ A+
Sbjct: 242 SKSKGAGK---------------TCWICGKEGHFKKQCYVWKERNKQGSTSERGEASTVT 286
Query: 176 PDEPYVAMITEINMIAG-----SDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLLGDSH 230
A + + G D W +DTG S H+ +D + KV +G+
Sbjct: 287 ARVTDAAALVVSRALLGFAEVTPDTWILDTGCSFHMTCRKDWIIDFKETASGKVRMGNDT 346
Query: 231 STDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTITKN 290
++V GIGD+ +K T++L DV + P++ KNL+S L G + TI KN
Sbjct: 347 YSEVKGIGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTLEDKGCWFESKKGILTIFKN 406
Query: 291 GIFVGKGYATDGMFKLN----------IDMNKISSSAYMLCDFNIWHSRLCHVNKRIISN 340
+ V G ++ L ID K +S +WHSRL H+ + +
Sbjct: 407 DLTVLTGKKESTLYFLQGTTLAGEANVIDKEKDETS--------LWHSRLGHIGAKGLQV 458
Query: 341 MSGLGLIPKISLNDFEKCQFCSQAKINKESHKSVTRITEPFELIHSDLCELDGNLTRNGK 400
+ G + K + F + ++ K+ + +HSDL GK
Sbjct: 459 LVSKGHLDKNIMISFGAAKHVTKDKL---------------DYVHSDLWGSTNVPFSIGK 503
Query: 401 -RYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHI 459
+YFITFIDD + T +Y +R K+EA F ++ +IENQ + ++K +D G E+ +
Sbjct: 504 CQYFITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQDKKLKILITDNGLEFCNQE 563
Query: 460 FNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCY 519
F+ + ++ G+I T Y+P+ NG AER NRT V + SG +W E T +
Sbjct: 564 FDSFCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCMLSESGLGKQFWAEAASTAVF 623
Query: 520 VLNRVPKTKNKIS-PYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGY 578
++N+ P + + P E P+ + +G +AY+ K L RA + F+GY
Sbjct: 624 LINKSPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIHSDQGK---LNPRAKKGIFLGY 680
Query: 579 ALNSKAYRFYDLKSKTIIESNDVDFYENKFPFK--------------------------S 612
K ++ + L+ + + S D+ F EN+ + S
Sbjct: 681 PDGVKRFKVWLLEDRKCVVSRDIVFQENQMYKELQKNDMSEEDKQLTEVERTLIELKNLS 740
Query: 613 GDSGGNSGGTDNSVLDQPSEIITSNEN-------IERDVIEPGRGKRARIAKEY-GPEYV 664
D S G DNS +Q S +++++ + D +E R RI ++ P+
Sbjct: 741 ADDENQSEGGDNSNQEQASTTRSASKDKQVEETDSDDDCLENYLLARDRIRRQIRAPQRF 800
Query: 665 ----------AYTIEED-----PSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLTDL 709
A T+ ED P + +EA+ S + + W++A +EMDS+ N+TW + D
Sbjct: 801 VEEDDSLVGFALTMTEDGEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDK 860
Query: 710 PPGCKTIGCKWILKKKLK-PDGSIDKYKARLVAKGFRQRENVDFFDTYSPVTRITSIRVL 768
P G + IGCKWI K+K P +YKARLVAKGF QRE +D+ + +SPV + SIR L
Sbjct: 861 PEGKRVIGCKWIFKRKAGIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYL 920
Query: 769 ISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQAP 828
+S+ ++ + Q+DVKTAFL+G L+E I M QPEG+ KVC L KSLYGLKQ+P
Sbjct: 921 LSIVVQFDMELEQLDVKTAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSP 980
Query: 829 KQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTI-ICLYVDDLLIFGSNLNAIKDVKS 887
+QW+++FD+ MI + ++ ++ + C+Y++ N+ I + LYVDD+LI N + I+ +K
Sbjct: 981 RQWNQRFDSFMINSGYQRSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKE 1040
Query: 888 LLCHNFDMKDLGKADVILGIKITRT-DNGI-SLNQSHYVEKILRKYNYFYCKPASTPCDP 945
L F+MKDLG A ILG++ITR + GI L+QS YV +LR + K + TP
Sbjct: 1041 SLNREFEMKDLGPARKILGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGA 1100
Query: 946 SVKL-------FKNTGDSVRQTEYASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEH 998
KL + ++ Y + IGS+ Y+ +RPD++Y VG++ +F S+PS EH
Sbjct: 1101 HFKLRAANEKTLARDAEYMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEH 1160
Query: 999 WQAIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLSDDSKATSGYIFSIAGGAVS 1057
WQA++ VMRY+K T L +++ + GY D+D+ D ++ +G++F+ G +S
Sbjct: 1161 WQAVKWVMRYMKGTQDTCLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTIS 1220
Query: 1058 WKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAAIAK 1117
WKS Q ++A ST E+E +ALA A +EA WLR L +E+ + AV + CDS +AIA
Sbjct: 1221 WKSGLQRVVALSTTEAEYMALAEAVKEAIWLRGLAAEMGFEQ---DAVEVMCDSQSAIAL 1277
Query: 1118 IENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTK 1163
+N ++ + + I ++ IRE +++G ++V + T N AD TK
Sbjct: 1278 SKNSVHHERTKHIDVRYHFIREKIADGEIQVVKISTTWNPADIFTK 1323
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 540 bits (1392), Expect = e-153
Identities = 347/1092 (31%), Positives = 549/1092 (49%), Gaps = 79/1092 (7%)
Query: 145 CYNCGQADHMARKCRNRTNR--PAQAHMATDAAPDEPYVAMITEINMI------------ 190
CY C + H A +C +R + AQ + DE M+ E+ +
Sbjct: 215 CYRCDKTGHYASECLDRLLKLIKAQEQQQNNEDDDEIESLMMHEVVYLNERSVKPKEFEA 274
Query: 191 AGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLLGDSHSTDVVGIGDIELKFTSEKTL 250
+ W++D GAS H+ + F KV GD D+ G G I L
Sbjct: 275 CSDNSWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRK 334
Query: 251 ILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTI--TKNGIFVGKGYATDGMFKLNI 308
L DV P ++ N++S +AG + D T+ + + + + + ++K+++
Sbjct: 335 TLTDVYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKVDL 394
Query: 309 DMNKISSSAYMLCDFNIWHSRLCHVNKRIISNMSGLGLIPKISLNDFEKCQFCSQAKINK 368
++ + V K ++ +S IPK + E C C K +
Sbjct: 395 NVENVKCLQLEAATM---------VRKELVIGISN---IPK----EKETCGSCLLGKQAR 438
Query: 369 ESHKSVT--RITEPFELIHSDLCELDGNLTRNGKRYFITFIDDCSDYTHVYLMRNKNEAL 426
+ T R ++ EL+H DLC T KRY + IDD + Y L++ K+EA
Sbjct: 439 QPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSEAF 498
Query: 427 DIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHETTAPYSPEMNGKAE 486
+ F+ + ++E + ++IK FR+D+G E+ S F ++ + GI TAPY+P+ NG E
Sbjct: 499 EKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVVE 558
Query: 487 RKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRV-PKTKNKISPYEILKKRQPNLS 545
R+NRT + + + + + WGE + Y++NRV ++ +PYE+ K+R+PN+
Sbjct: 559 RRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNVE 618
Query: 546 YFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLKSKTIIESNDVDF-- 603
+ R +GC+ Y + P KL R+ ++G SKAYR D ++ II+ N+ D
Sbjct: 619 HLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSDSET 678
Query: 604 --YENKFPFKSGDSGGNS-------------GGTDNSVLDQPSEIITSNENIERDVIEPG 648
F G+ G N ++NS ++ E I+ + +P
Sbjct: 679 RDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAEETQPS 738
Query: 649 --------RGKRARIAK-----------EYGPEYVAYTIEEDPSSIKEALSSIDADLWQE 689
R ++ K E E V I ++P KEA + W++
Sbjct: 739 HATPLPTLRRSTRQVGKPNYLDDYVLMAEIEGEQVLLAINDEPWDFKEANKLKE---WRD 795
Query: 690 AINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLVAKGFRQREN 749
A +E+ S+ N+TW L DLP K IG KW+ K K DGSI+KYKARLVAKG+ QR
Sbjct: 796 ACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHG 855
Query: 750 VDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHG 809
+D+ + ++ V RI +IRV+I+LAA + VH +DVKTAFL+GEL E++Y+ QPEGF
Sbjct: 856 IDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKD 915
Query: 810 QENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTIICLYV 869
E KV KL K+LYGLKQAP+ W+ K + ++ E F + +Y + E I+ +YV
Sbjct: 916 NEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYV 975
Query: 870 DDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQSHYVEKILR 929
DDLL+ GS+L+ I K + F+M DLG+ LGI++ NGI L Q Y KI+
Sbjct: 976 DDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIEVLHRKNGIILRQERYAMKIIE 1035
Query: 930 KYNYFYCKPASTPCDPSVKLFKNTGDS-VRQTEYASIIGSLRYATDCTRPDISYAVGLLC 988
+ C P P ++L K + + + +Y +IG LRY TRPD+SY VG+L
Sbjct: 1036 EAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIGCLRYIVH-TRPDLSYCVGVLS 1094
Query: 989 KFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQR-YPAVLEGYSDADWNNLSDDSKATSGY 1047
++ +P H A+++V+RYLK TM+ GL+ +R + + L GYSD+ + DD K+T+G+
Sbjct: 1095 RYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLVGYSDSSHSADLDDGKSTAGH 1154
Query: 1048 IFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLI 1107
IF + ++W S+KQ ++A S+ E+E +A A+++A WL+ L +E+ V+I
Sbjct: 1155 IFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIWLQDLFAEV--CGTTSEKVMI 1212
Query: 1108 HCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGLNR 1167
D+ +AIA +N ++G+ + I R++ IRE + N V VD V E AD LTK L R
Sbjct: 1213 RVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVDHVPGVEQRADILTKPLGR 1272
Query: 1168 EKVANTSSRMGL 1179
K +G+
Sbjct: 1273 IKFREMRELVGV 1284
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 531 bits (1367), Expect = e-150
Identities = 385/1233 (31%), Positives = 620/1233 (50%), Gaps = 115/1233 (9%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
MS++ S+E E +I ++ + + ++ Q +++ LP + + L++ +
Sbjct: 127 MSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDTLKYGLGRVT 186
Query: 61 LESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNSNR 120
L +E ++E+ + SN KK G + G K + + R
Sbjct: 187 LSL--------DEVVAAIYSKELELGSN---KKSIKG---QAEGLFVKEKTETRGRTEQR 232
Query: 121 NKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKCRNRTNRPAQAHMATDAAPDEPY 180
NN + + + K C+ CG++ N ++ ++A+ Y
Sbjct: 233 GNNNNNKKSRSKSRSKK------GCWICGESS-------NGSSNYSEANGL--------Y 271
Query: 181 VAMITEINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLLGDSHSTDVVGIGDI 240
V+ I D W +DTG S H+ Y R+ F+ V +G+ + V GIG I
Sbjct: 272 VSEALSSTDIHLEDEWVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTI 331
Query: 241 ELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTITKNG---IFVGKG 297
+K + + L +V + P++ +NL+S K+G++ + +I + V +
Sbjct: 332 RVKNEAGMVVRLTNVRYIPEMDRNLLSLGTFEKSGYSFKLENGTLSIIAGDSVLLTVRRC 391
Query: 298 YATDGMFKLNIDMNKISSSAYMLCDFNIWHSRLCHVNKRIISNMSGLGLIPKISLNDFEK 357
Y T + + + S D +WH RL H++++ + + GL+ K ++ E
Sbjct: 392 Y-TLYLLQWRPVTEESLSVVKRQDDTILWHRRLGHMSQKNMDLLLKKGLLDKKKVSKLET 450
Query: 358 CQFCSQAKINKESHKSVTRIT-EPFELIHSDLCELDGNLTRNGK-RYFITFIDDCSDYTH 415
C+ C K + T E E +HSDL GK +YFI+FIDD +
Sbjct: 451 CEDCIYGKAKRIGFNLAQHDTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVR 510
Query: 416 VYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHETTA 475
+Y ++ K+EA D F ++ +ENQ + RIK R+D G E+ + F+E+ + GI+ T
Sbjct: 511 IYFLKTKDEAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTC 570
Query: 476 PYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRVPKTKNKISPYE 535
Y+P+ NG AER NRT E V + + +SG +W E T ++N+ P + YE
Sbjct: 571 AYTPQQNGVAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALN---YE 627
Query: 536 ILKKR----QPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLK 591
+ KR P SY R +GC+A+V D K L RA + +GY + K Y+ + L+
Sbjct: 628 VPDKRWSGKSPIYSYLRRFGCIAFVHTDDGK---LNPRAKKGILVGYPIGVKGYKIWLLE 684
Query: 592 SKTIIESNDVDFYEN---KFPFKSGDSGGN---------------------SGGTDNSVL 627
K + S +V F EN K +S D+ + SGG D V
Sbjct: 685 EKKCVVSRNVIFQENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVE 744
Query: 628 DQ------PSEIITSNE--NIERDVIEP--------GRGKRA-RIAKEYGPE-YVA---Y 666
Q P+ T +E N E D+I+ R +R R + E Y+A Y
Sbjct: 745 AQSPFNPSPATTQTYSEGVNSETDIIQSPLSYQLVRDRDRRTIRAPVRFDDEDYLAEALY 804
Query: 667 TIEE----DPSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLTDLPPGCKTIGCKWIL 722
T E+ +P+ EA S++ + W+ A+N+EM+S + N TW + P K IG +WI
Sbjct: 805 TTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKVIGSRWIY 864
Query: 723 KKKLKPDGSID-KYKARLVAKGFRQRENVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQ 781
K KL G + ++KARLVAKG+ QR+ +D+ + ++PV + SIR+L+S+ A +L + Q
Sbjct: 865 KFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQEDLELEQ 924
Query: 782 MDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQAPKQWHEKFDNLMIE 841
+DVKTAFL+GEL+E+IYM PEG+ +E++VC L+KSLYGLKQAPKQW+EKF+ M E
Sbjct: 925 LDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEKFNAYMSE 984
Query: 842 NEFKVNESDKCIYSK-YENNTCTIICLYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGK 900
F + D C Y K + + + LYVDD+L+ N I +K L FDMKDLG
Sbjct: 985 IGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRFDMKDLGA 1044
Query: 901 ADVILGIKI--TRTDNGISLNQSHYVEKILRKYNYFYCKPASTPCDPSVKLFKNTGDSVR 958
A ILG++I R +N + L+Q+ Y+ KIL YN K TP +K+ T +
Sbjct: 1045 AKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRAATVEKQE 1104
Query: 959 QTE-------YASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEHWQAIERVMRYLKK 1011
Q E Y+S +GS+ YA TRPD++Y VG++ ++ S+P+ EHW ++ V+RY+K
Sbjct: 1105 QDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIKG 1164
Query: 1012 TMTLGLHYQRYPAV-LEGYSDADWNNLSDDSKATSGYIFSIAGGAVSWKSKKQTILAQST 1070
++ L Y+R + GY DAD D ++ +G +F++ G +SWKS +Q ++A ST
Sbjct: 1165 SLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQRVVALST 1224
Query: 1071 MESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAAIAKIENRYYNGKRRQI 1130
E+E ++L A +EA W++ LL E ++ +V I CDS +AIA +N ++ + + I
Sbjct: 1225 TEAEYMSLTEAVKEAVWMKGLLKEFGYEQK---SVEIFCDSQSAIALSKNNVHHERTKHI 1281
Query: 1131 RRKHSTIREYLSNGTVRVDFVRTNENLADPLTK 1163
++ IR+ ++NG V + T +N AD TK
Sbjct: 1282 DVRYQYIRDIIANGDGDVVKIDTEKNPADIFTK 1314
>At3g45520 copia-like polyprotein
Length = 1363
Score = 530 bits (1366), Expect = e-150
Identities = 375/1251 (29%), Positives = 618/1251 (48%), Gaps = 117/1251 (9%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
MS++ S+E E I ++ + + ++ Q +++ LP + K L++ + +
Sbjct: 127 MSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLKYSSGK-- 184
Query: 61 LESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNSNR 120
T L ++E A E F + K + G +K K +NR ++ ++
Sbjct: 185 -----TVLSLDEVAAAIYSRELEFGSVKKSIKGQAEGLYVKD-----KAENRGRSEQKDK 234
Query: 121 NKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKCRNRTNRPAQAHMATDAAPDEPY 180
K G S+ + ++ C+ CG+ H+ C N+ N+P + ++
Sbjct: 235 GK-GKRSKSKSKR----------GCWICGEDGHLKSTCPNK-NKPQFKNQGSNKGESSGG 282
Query: 181 VAMITE--INMIAGS----------------DGWWVDTGASRHVCYDRDMFKTYTACDDQ 222
+ E +N + + D W +DTG H+ + R+ + +
Sbjct: 283 KGNLVEGSVNFVESAGMFVSEALSSTDIHLEDEWIMDTGCIYHMTHKREWLEDFDEEAGG 342
Query: 223 KVLLGDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGA 282
V +G+ + V G+G + + + T+ L++V + P + +NL+S KAG
Sbjct: 343 SVRMGNKSISRVKGVGTVRIVNDNGLTVTLQNVRYIPDMDRNLLSLGTFEKAGHKFESEN 402
Query: 283 DLYTITKNGIFVGKGYATDGMFKLNIDMNKISSSAYMLC--DFNIWHSRLCHVNKRIISN 340
+ I + +G D ++ L+ S A D +WH RLCH++++ +S
Sbjct: 403 GMLRIKSGNQVLLEGRRYDTLYILHGKPATDESLAVARANDDTVLWHRRLCHMSQKNMSL 462
Query: 341 MSGLGLIPKISLNDFEKCQFCSQAKINKESHKSVTRITEP-FELIHSDLCELDG-NLTRN 398
+ G + K ++ + C+ C + K T+ E +HSDL ++
Sbjct: 463 LIKKGFLDKKKVSMLDTCEDCIYGRAKKIGFNLAQHDTKKKLEYVHSDLWGAPTVPMSLG 522
Query: 399 GKRYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSH 458
+YFI+FIDD + VY ++ K+EA + F ++ +ENQ R+K R+D G E+ +
Sbjct: 523 NCQYFISFIDDYTRKVWVYFLKTKDEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNR 582
Query: 459 IFNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVC 518
+F+ + +E G T Y+P+ NG ER NRT E V + + +SG +W E T
Sbjct: 583 MFDGFCEEKGFQRHRTCAYTPQQNGVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAV 642
Query: 519 YVLNRVPKTK-NKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIG 577
++N+ P + N P + + P SY R +GC+ +V K L RA + IG
Sbjct: 643 LLINKTPCSAINFEFPDKRWSGKAPIYSYLRRYGCVTFVHTDGGK---LNLRAKKGVLIG 699
Query: 578 YALNSKAYRFYDLKSKTIIESNDVDFYENKFPFKS------------------------- 612
Y K Y+ + ++ K + S +V F EN +K
Sbjct: 700 YPSGVKGYKVWLIEEKKCVVSRNVSFQENAV-YKDLMQRKEQVSCEEDDHAGSYIDLDLE 758
Query: 613 GDSGGNSGGTDNSVLDQPSE---IITSNENIERDVIEPG---------------RGKRAR 654
D +SGG + P+ + ++ E D IE + R
Sbjct: 759 ADKDNSSGGEQSQAQVTPATRGAVTSTPPRYETDDIEETDVHQSPLSYHLVRDRERREIR 818
Query: 655 IAKEYGPE-YVA---YTIEE----DPSSIKEALSSIDADLWQEAINDEMDSLMSNETWHL 706
+ + E Y A YT E+ +P+ KEA+ + D W+ A+N+E++S + N+TW
Sbjct: 819 APRRFDDEDYYAEALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTT 878
Query: 707 TDLPPGCKTIGCKWILKKKLKPDGSID-KYKARLVAKGFRQRENVDFFDTYSPVTRITSI 765
P + IG +WI K K G + ++KARLVAKG+ QRE VD+ + ++PV + SI
Sbjct: 879 VTRPEKQRIIGSRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSI 938
Query: 766 RVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLK 825
R+L+S+ A NL + Q+DVKTAFL+GEL+E+IYM PEG +EN+VC L+KSLYGLK
Sbjct: 939 RILLSIVAQENLELEQLDVKTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLK 998
Query: 826 QAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTIICL-YVDDLLIFGSNLNAIKD 884
QAP+QW+EKF++ M E FK ++ D C Y+K ++ T+ L YVDD+L+ +N+ AI
Sbjct: 999 QAPRQWNEKFNHYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDA 1058
Query: 885 VKSLLCHNFDMKDLGKADVILGIK--ITRTDNGISLNQSHYVEKILRKYNYFYCKPASTP 942
+K L F+MKDLG A ILGI+ I R + L+Q Y+ K+L+ +N KPA TP
Sbjct: 1059 LKKELSIKFEMKDLGAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTP 1118
Query: 943 CDPSVKLFKNTGDSVRQTE-------YASIIGSLRYATDCTRPDISYAVGLLCKFTSRPS 995
+K+ T + + E Y+S +GS+ YA TRPD++Y VG++ +F S+P+
Sbjct: 1119 LGAHLKMKSATEEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPA 1178
Query: 996 MEHWQAIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLSDDSKATSGYIFSIAGG 1054
EHW ++ V+RY+K T+ L Y+R + GY DAD+ D ++ +G +F++ G
Sbjct: 1179 KEHWLGVKWVLRYIKGTVDTRLCYKRNSDFSICGYCDADYAADLDKRRSITGLVFTLGGN 1238
Query: 1055 AVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAA 1114
+SWKS Q ++AQS+ E E ++L A +EA WL+ LL + ++ V I CDS +A
Sbjct: 1239 TISWKSGLQRVVAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQK---NVEIFCDSQSA 1295
Query: 1115 IAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTKGL 1165
IA +N ++ + + I K IRE +++G V V + T +N AD TK L
Sbjct: 1296 IALSKNNVHHERTKHIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVL 1346
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 517 bits (1332), Expect = e-146
Identities = 348/1159 (30%), Positives = 577/1159 (49%), Gaps = 122/1159 (10%)
Query: 60 SLESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNS- 118
++E L+ L+ EE +K++++ V++ TK++ + + G + + R N
Sbjct: 186 TIEQLLGSLQAYEEKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGR 245
Query: 119 -------NRNKTG-NNSRPQIQQPPKNDA-APPFNCYNCGQADHMARKCRNRTNRP--AQ 167
N N+ G N+SR + + PK+ CYNCG+ H A +C+ +N+ +
Sbjct: 246 GWRPHEDNTNQRGENSSRGRGKGHPKSRYDKSSVKCYNCGKFGHYASECKAPSNKKFKEK 305
Query: 168 AHMATDAAPDEPYVAMIT-EINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLL 226
A+ + +E + M + + + + W++D+GAS H+C + MF V L
Sbjct: 306 ANYVEEKIQEEDMLLMASYKKDEQEENHKWYLDSGASNHMCGRKSMFAELDESVRGNVAL 365
Query: 227 GDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVS-GFLLNKAGFTQSIGADLY 285
GD +V G G+I ++ + + +V + P ++ N++S G LL K + +L
Sbjct: 366 GDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMKTNILSLGQLLEKGYDIRLKDNNLS 425
Query: 286 TITKNGIFVGK-GYATDGMFKLNIDMNKISSSAYMLCDFN--IWHSRLCHVN---KRIIS 339
K + K + + MF LNI N I+ M +WH R H+N ++S
Sbjct: 426 IRDKESNLITKVPMSKNRMFVLNI-RNDIAQCLKMCYKEESWLWHLRFGHLNFGGLELLS 484
Query: 340 NMSGLGLIPKISLNDFEKCQFCSQAKINKESH--KSVTRITEPFELIHSDLCELDGNLTR 397
+ +P I+ + + C+ C K S +S +R +P ELIH+D+C +
Sbjct: 485 RKEMVRGLPCIN-HPNQVCEGCLLGNQFKMSFPKESSSRAQKPLELIHTDVCGPIKPKSL 543
Query: 398 NGKRYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGS 457
YF+ FIDD S T VY ++ K+E +IFK++ +E + + IK RSD G E+ S
Sbjct: 544 GKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKKFKAHVEKESGLVIKTMRSDSGGEFTS 603
Query: 458 HIFNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTV 517
F +Y ++ GI + T P SP+ NG AERKNRT E+ + + + W E +
Sbjct: 604 KEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAEAVACA 663
Query: 518 CYVLNRVP-KTKNKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFI 576
Y+LNR P K+ + +P E R+P +S+ R +G +A+ PD KR KL ++ + FI
Sbjct: 664 VYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRNKLDDKSEKYIFI 723
Query: 577 GYALNSKAYRFYDLKSK-TIIESNDVDFYENKFPFKSGDSGGNSGGTDNSVLDQPSEIIT 635
GY NSK Y+ Y+ +K TII N V E ++ + S + N +P+
Sbjct: 724 GYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEEDYNFFPHFEEDKPEPTREEP 783
Query: 636 SNENIERDVIEPGRGKRARIAKEYGPEYVA----YTIEEDPSSIK-----------EALS 680
+E P + + E P + + Y + E+ ++ +
Sbjct: 784 PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLFCLFAECEPMDFQE 843
Query: 681 SIDADLWQEAINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLV 740
+I+ W+ A+++E+ S+ N+TW LT LP G K IG KW+ K K G +++YKARLV
Sbjct: 844 AIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKARLV 903
Query: 741 AKGFRQRENVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMD 800
AKG+ QR +D+ + ++PV R+ ++R++ISLAA + +HQMDVK+AFLNG+LEEE+Y++
Sbjct: 904 AKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEVYIE 963
Query: 801 QPEGFVIHGQENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENN 860
QP+G+++ G+E+KV +L K LYGLKQAP+ W+ + D E +F + +Y K +
Sbjct: 964 QPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKIQKE 1023
Query: 861 TCTIICLYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQ 920
I CLYVDDL+ G+N + ++ K + F+M D+G LGI++ + DNGI + Q
Sbjct: 1024 DILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIFITQ 1083
Query: 921 SHYVEKILRKYNYFYCKPASTPCDPSVKLFKNTGDSVRQTEYASIIGSLRYATDCTRPDI 980
Y +++L+K+ P S++GSLRY T CTRPDI
Sbjct: 1084 EGYAKEVLKKFKMDDSNP-------------------------SLVGSLRYLT-CTRPDI 1117
Query: 981 SYAVGLLCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQRYPAVLEGYSDADWNNLSDD 1040
YAVG++ ++ P+ H++A +R++RY+K T+ GLHY
Sbjct: 1118 LYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHY--------------------- 1156
Query: 1041 SKATSGYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWER 1100
TS Y + A WLR LL E+ L +
Sbjct: 1157 -STTSDYKLVVC-------------------------------HAIWLRNLLKELSLPQE 1184
Query: 1101 PLPAVLIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADP 1160
+ + D+ +AIA +N ++ + + I ++ IRE +S V++++V+T++ +AD
Sbjct: 1185 EPTKIFV--DNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVADI 1242
Query: 1161 LTKGLNREKVANTSSRMGL 1179
TK L RE S +G+
Sbjct: 1243 FTKPLKREDFIKMRSLLGV 1261
>At4g21360 putative transposable element
Length = 1308
Score = 513 bits (1322), Expect = e-145
Identities = 355/1236 (28%), Positives = 591/1236 (47%), Gaps = 155/1236 (12%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
M D+ S++ + E +I E+ + + + E+ Q +I++ LPP++ K L++ K S
Sbjct: 137 MVDNLSIDQNTDEFLRIVAELGSLQIQVGEEVQAILILNSLPPSYIQLKHTLKYGNKTLS 196
Query: 61 LESLITRLR-IEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPF--KNQNRPMNKN 117
++ +++ + +E E +Q++ + PA + RP KN
Sbjct: 197 VQDVVSSAKSLERELSEQKET------------------IRAPASTALYTAERGRPQTKN 238
Query: 118 SNRNKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKC-----RNRTNRPAQAHMAT 172
+ G ++++ C+ C + H+ + C + +A + T
Sbjct: 239 TQGQGKGRG---------RSNSKSRLTCWFCKKEGHVKKDCYAGKRKLENEGQGKAGVIT 289
Query: 173 DAAPDEPYVAMITEINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLLGDSHST 232
+ ++M + D W +D+G + H+ D F + + +LLGD H+
Sbjct: 290 EKLVYSEALSMYDQ----EAKDKWVIDSGCTYHMTSRMDWFSEFNENETTMILLGDDHTV 345
Query: 233 DVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTITKN-- 290
+ G G +++ +LK+V P +R+NL+S L+K G+ G K
Sbjct: 346 ESKGSGTVKVNTHGGSIRVLKNVRFVPNLRRNLISTGTLDKLGYKHEGGDGKVRFYKENK 405
Query: 291 ----GIFVGKGYATDGMFKLNIDMNKISSSAYMLCDFNIWHSRLCHVNKRIISNMSGLGL 346
G V Y DG +N + N S+ +WH RL H++ + ++ GL
Sbjct: 406 TALCGNLVNGLYVLDGHTVVNENCNVEGSNEKT----ELWHCRLGHMSLNNMKILAEKGL 461
Query: 347 IPKISLNDFEKCQFCSQAKINKESHKSVTRIT-EPFELIHSDLCELDGNLTRNGKRYFIT 405
+ K + + C+ C K K S IT E IH+DL GK+YF++
Sbjct: 462 LEKKDIKELSFCENCVMGKSKKLSFNVGKHITDEVLGYIHADLW---------GKQYFLS 512
Query: 406 FIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYK 465
IDD S + ++ K+E + F ++ + +ENQ N ++K R+D G E+ + F+E+ K
Sbjct: 513 IIDDKSRKVWLMFLKTKDETFERFCEWKELVENQVNKKVKILRTDNGLEFCNLKFDEFCK 572
Query: 466 ELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRVP 525
+ GI T Y+P+ NG A+R NRT E V + SG +W E T Y++NR P
Sbjct: 573 QNGIERHRTCTYTPQQNGVAKRMNRTLMEKVRCLLNESGLEEVFWAEAAATAAYLVNRSP 632
Query: 526 KTK-NKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKA 584
+ + P E+ ++P + R +GC+AYV K L RA + F+GY +K
Sbjct: 633 ASAVDHNVPEELWLDKKPGYKHLRRFGCIAYVHLDQGK---LKPRALKGVFLGYPQGTKG 689
Query: 585 YRFYDLKSKTIIESNDVDFYENKF--------------------------PFKSGDSGGN 618
Y+ + L + + S ++ F EN+ K
Sbjct: 690 YKVWLLDEEKCVISRNIVFNENQVYKDIRESSEQSVKDISDLEGYNEFQVSVKEHGECSK 749
Query: 619 SGG-----------TDNSVLDQP--SEIITSNENIERDVIEPGRGKRARIAKEYGPEYVA 665
+GG ++NSV +P + I SN RD R +RA + +Y
Sbjct: 750 TGGVTIEEIDQESDSENSVTQEPLIASIDLSNYQSARD-----RERRAPNPPQKLADYTH 804
Query: 666 YTI---------EEDPSSIKEALSSIDADLWQEAINDEMDSLMSNETWHLTDLPPGCKTI 716
+ + E+P +A W + +E+DSL+ N TW + + P K I
Sbjct: 805 FALALVMAEEIESEEPQCYHDAKKDKHWIKWNGGMKEEIDSLLKNGTWDIVEWPKEQKVI 864
Query: 717 GCKWILKKKLK-PDGSIDKYKARLVAKGFRQRENVDFFDTYSPVTRITSIRVLISLAAIH 775
C+W+ K K P +YKARLVA+GF Q++ +D+ + ++PV + SIR+L+S
Sbjct: 865 SCRWLFKLKPGIPGVEAQRYKARLVARGFTQQKGIDYEEVFAPVVKHISIRILMSAVVKD 924
Query: 776 NLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQENKVCKLDKSLYGLKQAPKQWHEKF 835
++ + QMDVKT FL+GEL++ +YM+QPEGF ++ ++++VC L KSLYGLKQAP+QW++KF
Sbjct: 925 DMELEQMDVKTTFLHGELDQVLYMEQPEGFEVNPEKDQVCLLKKSLYGLKQAPRQWNKKF 984
Query: 836 DNLMIENEFKVNESDKCIYSKYEN-NTCTIICLYVDDLLIFGSNLNAIKDVKSLLCHNFD 894
M+ +F +E D C+Y K N + LYVDD+L+ + + I +K L F+
Sbjct: 985 HAFMLSLQFARSEHDSCVYVKEVNPGEFVYLLLYVDDMLLAAKSKSEISKLKEALSLKFE 1044
Query: 895 MKDLGKADVILGIKI--TRTDNGISLNQSHYVEKILRKYNYFYCKPASTPCDPSVKLFKN 952
MKD+G A ILGI I R + + L+Q+ YV+K+++++ K STP KL +
Sbjct: 1045 MKDMGAASRILGIDIIRNRKEGTLRLSQTRYVDKVIQRFRMADAKVVSTPMGAHFKL-TS 1103
Query: 953 TGDSVRQTE-----YASIIGSLRYATDCTRPDISYAVGLLCKFTSRPSMEHWQAIERVMR 1007
D + + Y+S +GS+ YA T PD++YA+GL+ +F SRP
Sbjct: 1104 LIDEIGSVDPEVVPYSSAVGSVMYAMIGTIPDVAYAMGLVSRFMSRPGAN---------- 1153
Query: 1008 YLKKTMTLGLHYQRYPAVLEGYSDADWNNLSDDSKATSGYIFSIAGGAVSWKSKKQTILA 1067
++GY D+D D ++ SGY+F++ G VSWKS Q ++A
Sbjct: 1154 ----------------LEVQGYCDSDHAADLDKRRSISGYVFTVGGNTVSWKSSLQHVVA 1197
Query: 1068 QSTMESEMIALAAASEEASWLRCLLSEIPLWERPLPAVLIHCDSTAAIAKIENRYYNGKR 1127
S+ ++E IAL A +EA W+R LL ++ L +P PA + CDS +AI +N ++ +
Sbjct: 1198 LSSTQAEFIALTEAVKEAIWIRGLLEDMGL--QPKPAT-VWCDSQSAICLSKNNAFHDRT 1254
Query: 1128 RQIRRKHSTIREYLSNGTVRVDFVRTNENLADPLTK 1163
+ + K IR+ + G V+V + T+ N AD LTK
Sbjct: 1255 KHVEVKFYFIRDIIEAGEVKVRKIHTSVNPADMLTK 1290
>At4g17450 retrotransposon like protein
Length = 1433
Score = 510 bits (1314), Expect = e-144
Identities = 323/1042 (30%), Positives = 533/1042 (50%), Gaps = 99/1042 (9%)
Query: 195 GWWVDTGASRHVCYDRDMFKTYTACDDQKVLLGDSHSTDVVGIGDIELKFTSEKTLILKD 254
GW +D+GA+ HV ++RD++ + + ++ V L + + + GIG I+L + L +
Sbjct: 431 GWVIDSGATHHVTHNRDLYLNFRSLENTFVRLPNDCTVKIAGIGFIQLS----DAISLHN 486
Query: 255 VLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTITKNGIFVGKGYATDGMFKLNIDMNK-- 312
VL+ P+ + NL+S +TK + +G+G ++ L+ + N
Sbjct: 487 VLYIPEFKFNLIS------------------ELTKE-LMIGRGSQVGNLYVLDFNENNHT 527
Query: 313 --ISSSAYMLCDFNI----------WHSRLCHVNKRIISNMSG-LGL-IPKISLNDFEKC 358
+ + M +F++ WH RL H I +S L L + KI+ C
Sbjct: 528 VSLKGTTSMCPEFSVCSSVVVDSVTWHKRLGHPAYSKIDLLSDVLNLKVKKINKEHSPVC 587
Query: 359 QFCSQAKINKESHKSV----TRITEPFELIHSDLCELDGNLTRNGKRYFITFIDDCSDYT 414
C ++K+ H S + F+L+H D + F +D T
Sbjct: 588 HVCHVCHLSKQKHLSFQSRQNMCSAAFDLVHIDT--------------WGPFSVPTNDAT 633
Query: 415 HVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIFNEYYKELGIIHETT 474
+YL++NK++ L +F ++ + Q+ ++K RSD E F + + GI+ +
Sbjct: 634 WIYLLKNKSDVLHVFPAFINMVHTQYQTKLKSVRSDNAHELK---FTDLFAAHGIVAYHS 690
Query: 475 APYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYVLNRVPK-TKNKISP 533
P +PE N ERK++ + A + S +WG+ +LT +++NR+P N SP
Sbjct: 691 CPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVFLINRLPTPVLNNKSP 750
Query: 534 YEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYALNSKAYRFYDLKSK 593
YE LK P +T+GCL Y +R K RA C F+GY L K Y+ D+++
Sbjct: 751 YEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGYPLGYKGYKLLDIETH 810
Query: 594 TIIESNDVDFYENKFPFKSGDSGGN----------SGGTDNSVLDQPSEIIT-SNENIER 642
+ S V F+E+ FPF S + TD+ L+Q S I T ++++
Sbjct: 811 AVSISRHVIFHEDIFPFISSTIKDDIKDFFPLLQFPARTDDLPLEQTSIIDTHPHQDVSS 870
Query: 643 D---VIEPGRGKRARIAKEYGPEYVAYTIEEDP-----SSIKEAL------SSIDADLWQ 688
V KR + ++ ++ Y +P ++I A+ + D W
Sbjct: 871 SKALVPFDPLSKRQKKPPKHLQDFHCYNNTTEPFHAFINNITNAVIPQRYSEAKDFKAWC 930
Query: 689 EAINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDGSIDKYKARLVAKGFRQRE 748
+A+ +E+ +++ TW + LPP K IGCKW+ K DGSI++YKARLVAKG+ Q E
Sbjct: 931 DAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEE 990
Query: 749 NVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFV-I 807
+D+ +T+SPV ++TS+R+++ LAA VHQ+D+ AFLNG+L+EEIYM P G+ +
Sbjct: 991 GLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYADL 1050
Query: 808 HGQ---ENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTI 864
G+ + +C+L KS+YGLKQA +QW+ K N + F+ + +D ++ KY N
Sbjct: 1051 VGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYANGVLMG 1110
Query: 865 ICLYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKITRTDNGISLNQSHYV 924
+ +YVDD++I ++ +A+ + L F ++DLG A LGI+I R++ GIS+ Q Y+
Sbjct: 1111 VLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISICQRKYI 1170
Query: 925 EKILRKYNYFYCKPASTPCDPSVKLFKNTGDSVR-QTEYASIIGSLRYATDCTRPDISYA 983
++L + KP+S P DPSVKL K G + T Y ++G L Y TRPDI+YA
Sbjct: 1171 LELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMY-LQITRPDIAYA 1229
Query: 984 VGLLCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQRYPAV-LEGYSDADWNNLSDDSK 1042
V LC+F+ P+ H A+ +V+RYLK T+ GL Y L GY+D+D+ + +D +
Sbjct: 1230 VNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRR 1289
Query: 1043 ATSGYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSE--IPLWER 1100
+ Y I VSWKSKKQ ++ ST E+E A++ ++E WL L + +P
Sbjct: 1290 CVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKVPF--- 1346
Query: 1101 PLPAVLIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADP 1160
+P ++CD+TAA+ + N ++ + + + RE + +G ++ FV T E +ADP
Sbjct: 1347 -IPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREAVESGFLKTMFVETGEQVADP 1405
Query: 1161 LTKGLNREKVANTSSRMGLMPI 1182
LTK ++ + +MG+ I
Sbjct: 1406 LTKAIHPAQFHKLIGKMGVCNI 1427
>At4g10460 putative retrotransposon
Length = 1230
Score = 453 bits (1166), Expect = e-127
Identities = 335/1203 (27%), Positives = 567/1203 (46%), Gaps = 156/1203 (12%)
Query: 1 MSDDKSVEAQSHELQQIAHEIIAEGMALPEQFQIAVIIDKLPPAWKDFKSLLRHKTKEFS 60
M ++ SVE E ++ ++ + + ++ Q +++ LP + K L++ +
Sbjct: 125 MQENLSVEGNIDEFLRLIADLENTNVLVSDEDQAILLLMSLPKQFDQLKDTLKYGSGR-- 182
Query: 61 LESLITRLRIEEEARKQEQNEEVFVVSNNNTKKKFVGAVLKPAGKPFKNQNRPMNKNSNR 120
T L ++E E + + + + G +K K + R M S +
Sbjct: 183 -----TTLSVDEVVAAIYSKELELGSNKKSIRGQAEGLYVKD-----KPETRGM---SEQ 229
Query: 121 NKTGNNSRPQIQQPPKNDAAPPFNCYNCGQADHMARKCRNRTNRPAQAHMATDAAPDEP- 179
+ GN R + + C+ CG+ H C N+ + + + E
Sbjct: 230 KEKGNKGRSRSRSKGWK------GCWICGEEGHFKTSCPNKGKQQNKGKDQASGSKGEAA 283
Query: 180 ------------YVAMITEINMIAGSDGWWVDTGASRHVCYDRDMFKTYTACDDQKVLLG 227
YV+ + + W +DTG + H+ + ++ F+ + V +G
Sbjct: 284 TIKGNTSEGSGYYVSEALHSTDVNLGNEWVMDTGCNYHMTHKKEWFEELSEDAGGTVRMG 343
Query: 228 DSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGADLYTI 287
+ ++ KF V + P + +NL+S L + G++
Sbjct: 344 NKSTS----------KFR---------VKYIPDMDRNLLSMGTLEEHGYSFE-------- 376
Query: 288 TKNGIFVGKGYATDGMF-----KLNIDMNKISSSAYMLC-----DFNIWHSRLCHVNKRI 337
+KNG+ V K + KL + K S M D +WH RL H++++
Sbjct: 377 SKNGVLVVKEGTRTLLIGSRHEKLYLLQGKPEVSHSMTVERRNDDTVLWHRRLGHISQKN 436
Query: 338 ISNMSGLGLIPKISLNDFEKCQFCSQAKINKESHKSVTRITEP-FELIHSDLCELDGNLT 396
+ + G + ++ E C+ C K + S T TE +HSDL
Sbjct: 437 MDILVKKGYLDGKKVSKLELCEDCIYGKARRLSFVVATHNTEDKLNYVHSDLWGAPSVPL 496
Query: 397 RNGK-RYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEY 455
GK +YFI+FID S T VY +++K+EA F ++ +ENQ +IK R D G E+
Sbjct: 497 SLGKCQYFISFIDVYSRKTWVYFLKHKDEAFGTFAEWSVMVENQTGRKIKILRIDNGLEF 556
Query: 456 GSHIFNEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILL 515
+ FN++ KE GI+ T Y+P+ NG AER N T E V + SG +W E
Sbjct: 557 CNQQFNDFCKEKGIVRHQTCAYTPQQNGVAERMNHTIMEKVRRMLSYSGLPKTFWAEATN 616
Query: 516 TVCYVLNRVPKTKNKISPYEILKKR----QPNLSYFRTWGCLAYVRKPDPKRVKLASRAY 571
TV ++N+ P + +EI KR P +Y + +GC+A+ + K L RA
Sbjct: 617 TVVTLINKTPSSAVN---FEISDKRWSGKSPVYNYLKRFGCVAFTYADEGK---LVPRAK 670
Query: 572 ECAFIGYALNSKAYRFYDLKSKTIIESNDVDFYENKFPFKSGDSGGNSGGTDNSVLDQPS 631
+ F+GY K Y+ + L+ + S +V F EN D ++ S
Sbjct: 671 KGVFLGYLSGEKGYKVWLLEERKCSVSRNVTFQENAVY------------RDVMQKNKDS 718
Query: 632 EIITSNENIERDVIEPGRGKRARIAKEYGPEYVAYTIEEDPSSIKEALSSIDADLWQEAI 691
E + ++ + R++ P R + Y +T +E+ S EAL
Sbjct: 719 EEVDTSSRVRREIRAPKRF-------DVEGYYSEFTDDEEESFNVEAL------------ 759
Query: 692 NDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLKPDG-SIDKYKARLVAKGFRQRENV 750
MDSL+ N TW + P G + IGCKWI K+K G ++KARLV+KG+ QRE +
Sbjct: 760 ---MDSLLKNHTWTVVKKPVGERVIGCKWIFKRKPGTPGIEQPRFKARLVSKGYAQREGI 816
Query: 751 DFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFVIHGQ 810
D+ D +SPV + SIR+L+++ A N + Q+DVKTAFL+G+LEE+I+M+ PEG+ +
Sbjct: 817 DYTDIFSPVVKHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEAPEGYESQFK 876
Query: 811 ENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSK-YENNTCTIICLYV 869
+ +VC L+K++YGLKQ+P++W++KFD+ M+E F+ + +KC Y K E+ + + +YV
Sbjct: 877 QGEVCLLNKTMYGLKQSPRRWNQKFDSYMLEIGFERSPRNKCAYIKSLEDGSKVYLLIYV 936
Query: 870 DDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKIT--RTDNGISLNQSHYVEKI 927
DD+L+ ++ I ++K L F+MKDLG A ILG++I+ R ++L+Q Y+ K+
Sbjct: 937 DDMLVAARDMQVISELKQKLSEKFEMKDLGAAKRILGMEISRDRVKGTLTLSQEDYLSKV 996
Query: 928 LRKYNYFYCKPASTPCDPSVKLFKNTGDSVRQTE-------YASIIGSLRYATDCTRPDI 980
L YN CK TP +K+ T + E Y++ +GS+ Y+ TRPD+
Sbjct: 997 LETYNVDQCKFVVTPLGAHLKMHAATEQQLLSDEEYMKSVPYSNAVGSIMYSMIDTRPDL 1056
Query: 981 SYAVGLLCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQRYPAVLEGYSDADWNNLSDD 1040
+Y VG++ +F S+P + L GY D+D+ ++
Sbjct: 1057 AYCVGIISRFMSKP-------------------------KGADLTLRGYCDSDYAANLEN 1091
Query: 1041 SKATSGYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWER 1100
++ SG +F++ G ++ +S Q ++ S+ ++ ++L A +EA WL+ LL + ++
Sbjct: 1092 RRSISGMVFTLGGSTINLRSCLQKVVVMSSTKAGYMSLTEAVKEAIWLKGLLQDFGYEQK 1151
Query: 1101 PLPAVLIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLADP 1160
V I CDS +AIA +N ++ + + I K+ IRE +++G V V + T N AD
Sbjct: 1152 ---TVEIFCDSQSAIALSKNNVHHDRTKHIDIKYHKIREVIADGVVEVKKICTLVNSADI 1208
Query: 1161 LTK 1163
TK
Sbjct: 1209 FTK 1211
>At4g04280 putative transposon protein
Length = 1104
Score = 379 bits (972), Expect = e-105
Identities = 285/966 (29%), Positives = 452/966 (46%), Gaps = 162/966 (16%)
Query: 224 VLLGDSHSTDVVGIGDIELKFTSEKTLILKDVLHTPKIRKNLVSGFLLNKAGFTQSIGAD 283
+LLGD H+ + G G I+L +LK+V + P +R+NL+S L+ G+ G
Sbjct: 261 ILLGDDHTVESRGCGTIKLNTHGGLIRMLKNVRYVPNLRRNLISTGTLHSLGYKHEGGEG 320
Query: 284 LYTITKNGIFVGKGYATDGMFKLNIDMNKISSSAYMLCDFNIWHSRLCHVNKRIISNMSG 343
KNG GY +G++ L D + + C N N +
Sbjct: 321 KLRFYKNGKTALCGYLMNGLYIL---------------DGHTVATETC--NAESAKNSTK 363
Query: 344 LGLIPKISLNDFEKCQFCSQAKINKESHKSVTRITEPF-ELIHSDLCELDGNLTRN--GK 400
L LI K D + C+ K K S +TE +H+DL N+T + GK
Sbjct: 364 L-LIEKKEFKDLDFCEHYVMGKSKKLSFNVGKHVTEDILGYVHADLWG-SPNVTPSISGK 421
Query: 401 RYFITFIDDCSDYTHVYLMRNKNEALDIFKQYVKEIENQFNIRIKRFRSDRGTEYGSHIF 460
+YF++ IDD S + +++K+E D F ++ + +EN ++K R+D G E+ ++ F
Sbjct: 422 QYFLSIIDDKSRKVWLMFLKSKDETFDKFCEWKEIVENHVGKKVKTLRTDNGLEFCNNRF 481
Query: 461 NEYYKELGIIHETTAPYSPEMNGKAERKNRTFTELVVATMLNSGAAPHWWGEILLTVCYV 520
N+Y + GI T Y+P+ NG +R NRT E V + + A H
Sbjct: 482 NDYCAKTGIERHRTCTYTPQQNGVTKRMNRTIMEKVRSP---ASAVDH------------ 526
Query: 521 LNRVPKTKNKISPYEILKKRQPNLSYFRTWGCLAYVRKPDPKRVKLASRAYECAFIGYAL 580
VP+ ++ R+P + R + +AYV + ++ KL R + F+GY
Sbjct: 527 --NVPE--------QLWLNREPGYKHLRRFSSIAYVHQ---EQGKLKPRVLKGVFLGYPQ 573
Query: 581 NSKAYRFYDLKSKTIIESNDVDFYENKFPFKSGDSGGNSGGTDNSVLDQPSEIITSNENI 640
+K Y+ + + + + S +V F E+ FK SG S D +V + I +
Sbjct: 574 GTKGYKVWLIDEEKCVISRNVVFNEDSV-FKDLQSG--SKDEDETVTQESQIEIETPPKS 630
Query: 641 ERDVIEPGRGKRARI-----AKEYGP-EYVAYTI-------EEDPSSIKEALSSIDADLW 687
E + +G ++ EY E A+ + E+P + D + W
Sbjct: 631 ELETQNQVQGGATQVQLNDSEDEYNDVEGFAFALVMAEEVESEEPVCFHDVKEDKDWEKW 690
Query: 688 QEAINDEMDSLMSNETWHLTDLPPGCKTIGCKWILKKKLK-PDGSIDKYKARLVAKGFRQ 746
+ +EMDSL+ N TW + D P K I C W+ KKKL P + +YKARLVA+GF
Sbjct: 691 HGGMIEEMDSLLKNATWDIVDKPKNQKVISCHWLYKKKLGIPGVELPRYKARLVARGFSH 750
Query: 747 RENVDFFDTYSPVTRITSIRVLISLAAIHNLIVHQMDVKTAFLNGELEEEIYMDQPEGFV 806
RE +D+ + +SPV + TSIR+L+SL ++ + QMDVKTAFL+GEL++ ++M+QPEGF
Sbjct: 751 REGIDYQEVFSPVVKHTSIRILLSLMVKEDMELEQMDVKTAFLHGELDQTLFMEQPEGF- 809
Query: 807 IHGQENKVCKLDKSLYGLKQAPKQWHEKFDNLMIENEFKVNESDKCIYSKYENNTCTIIC 866
+AP+QW+++F+ M++ +F + SD C+Y K +N
Sbjct: 810 -------------------EAPRQWNKRFNAFMMDQKFSRSVSDSCVYVKEVSN------ 844
Query: 867 LYVDDLLIFGSNLNAIKDVKSLLCHNFDMKDLGKADVILGIKI--TRTDNGISLNQSHYV 924
++ IK +K +L F+MKD+G A LGI I R++ + L+Q+ Y+
Sbjct: 845 ---------AKSMTEIKKLKKVLSREFEMKDMGAASRKLGIDIIRNRSEGTLCLSQTSYL 895
Query: 925 EKILRKYNYFYCKPASTPCDPSVKLFKNTGDSVR----QTEYASIIGSLRYATDCTRPDI 980
E++++K+ K +TP KL D R + Y+S++GSL
Sbjct: 896 ERVIQKFRMDGAKVVNTPIGAHFKLSSVHNDDERVGSEKVPYSSVVGSL----------- 944
Query: 981 SYAVGLLCKFTSRPSMEHWQAIERVMRYLKKTMTLGLHYQR-YPAVLEGYSDADWNNLSD 1039
F S+ HW A++ ++RYLK ++ L L Y + + ++GY D+D D
Sbjct: 945 --------MFMSKQGEVHWTAVKWLLRYLKWSIGLNLMYTKGFDFKVQGYCDSDHAADLD 996
Query: 1040 DSKATSGYIFSIAGGAVSWKSKKQTILAQSTMESEMIALAAASEEASWLRCLLSEIPLWE 1099
+ + SGY+F++ G VSWKS Q ++A ST E+E IAL A +EA W+R LL ++ L
Sbjct: 997 KNMSISGYVFTVGGNIVSWKSCLQPVVALSTTEAEYIALTKAVKEAMWIRNLLDDMMLG- 1055
Query: 1100 RPLPAVLIHCDSTAAIAKIENRYYNGKRRQIRRKHSTIREYLSNGTVRVDFVRTNENLAD 1159
TA + IE G V V + T N AD
Sbjct: 1056 ----------TETAEVDIIE-----------------------AGEVEVHKIHTTRNPAD 1082
Query: 1160 PLTKGL 1165
LTKG+
Sbjct: 1083 MLTKGI 1088
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,691,407
Number of Sequences: 26719
Number of extensions: 1255400
Number of successful extensions: 4432
Number of sequences better than 10.0: 179
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 44
Number of HSP's that attempted gapping in prelim test: 3557
Number of HSP's gapped (non-prelim): 362
length of query: 1185
length of database: 11,318,596
effective HSP length: 110
effective length of query: 1075
effective length of database: 8,379,506
effective search space: 9007968950
effective search space used: 9007968950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)
Medicago: description of AC147000.7