BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146914.1 + phase: 0 /pseudo
(369 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g48120 putative protein 297 5e-81
At2g33730 putative U5 small nuclear ribonucleoprotein, an RNA he... 78 7e-15
At1g60900 putative U2 snRNP auxiliary factor 77 2e-14
At2g40650 unknown protein 74 2e-13
At5g53440 putative protein 72 4e-13
At4g36690 splicing factor like protein 71 8e-13
At5g64200 unknown protein 70 2e-12
At3g50670 U1 snRNP 70K protein 70 2e-12
At1g20920 putative RNA helicase 69 5e-12
At3g49600 putative protein 68 9e-12
At2g16940 splicing factor like protein 67 2e-11
At5g37370 unknown protein 66 3e-11
At1g28060 unknown protein 64 1e-10
At4g02720 unknown protein 64 1e-10
At3g23900 unknown protein 64 1e-10
At5g16780 putative protein 63 2e-10
At3g25840 protein kinase like protein 62 7e-10
At3g26560 ATP-dependent RNA helicase, putative 61 9e-10
At3g09620 putative RNA helicase 60 1e-09
At5g09880 splicing factor-like protein 60 2e-09
>At3g48120 putative protein
Length = 347
Score = 297 bits (761), Expect = 5e-81
Identities = 188/366 (51%), Positives = 241/366 (65%), Gaps = 56/366 (15%)
Query: 1 MEEEKAAAYYDELTRKGEGAAKFKQGLGFSTSTSNDAVPKPGSSLVSSSSFLSQFVKASS 60
MEEEKAAAYYDELTRKGEGAA+FKQGLGFST + AVP+ GS++ SSSSFL+QFVKAS+
Sbjct: 1 MEEEKAAAYYDELTRKGEGAARFKQGLGFSTGAN--AVPERGSAIASSSSFLNQFVKASN 58
Query: 61 SSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRS 120
+ +T ++ S+++SI++KLKKKP + RV E++ R+ S R RR RS
Sbjct: 59 HTKST---------DNKDSEIRSIRDKLKKKPE-DPRVPERSYRESSER------RRYRS 102
Query: 121 RSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGRE 180
R R+ RD+ RRRSRS ER S Y DR+R R SRSRS +R DR R R
Sbjct: 103 RERDE-RDKSHRRRSRSSERRSSYVDRERRR------SRSRSAERRNRYGDRESRRRSN- 154
Query: 181 KGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVK 240
RSRS+SPR++RRS DVKE+ DY++LI GYD M+ AE+VK
Sbjct: 155 ----RSRSLSPRRERRSR---EDVKEKKP------------DYSRLIKGYDEMSAAEKVK 195
Query: 241 AKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEV-EGAEDDASLVKHIGQSFRFS-- 297
AKMKLQL ETA +D+ +G GWERFEF+K+AP+DDEE+ EGA+DDA+LVK +GQS+R S
Sbjct: 196 AKMKLQLDETAEKDTSKGAGWERFEFDKEAPVDDEELEEGADDDAALVKRMGQSYRASDS 255
Query: 298 ------AVESKREDQIQAAHDEAMFGAPAPPPPTSST-DSEPERENEKEVDNKKDL-VSS 349
++KRE+Q++AAHDEAMFG P PT +T D E N K+ + + + S
Sbjct: 256 LYGLIKTCKAKREEQLKAAHDEAMFGVPTGQTPTENTGDDVTEITNVKDDEGESNSGAIS 315
Query: 350 LLSETV 355
LLSE V
Sbjct: 316 LLSEKV 321
>At2g33730 putative U5 small nuclear ribonucleoprotein, an RNA
helicase
Length = 733
Score = 78.2 bits (191), Expect = 7e-15
Identities = 61/207 (29%), Positives = 93/207 (44%), Gaps = 23/207 (11%)
Query: 56 VKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVS-------EKTNRDYSS 108
V S+S T +S K Q + + K ++ +E RV E D S+
Sbjct: 8 VVGSTSVNTLDSSIAKKPVFLTKKQREELALKRRQDQISEQRVRREQLGRPEPETEDVSN 67
Query: 109 RDSDRRKRRSRSRSRERYRDRDSRRRSRSRERN-SRYSDRDRDRDRDSGRSRSRSDSDVD 167
D++R K R R R R+R RDRD R R R R+R+ R DRDRDR+R+ R R R + D +
Sbjct: 68 GDTNRDKDRDRDRDRDRERDRD-RERDRGRDRDRDRDRDRDRDRERERDRERDRRERDRE 126
Query: 168 RGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLI 227
R R++ER E R V +R E + +KE+ G + K + +
Sbjct: 127 PDRRNREKEREEEVKAREKARVEKLVEREKEKELDAIKEQYLGGKKPKKRVI-------- 178
Query: 228 HGYDNMAPAERVKAKMKLQLSETAARD 254
P+E+ + + +E +RD
Sbjct: 179 ------RPSEKFRFSFDWENTEDTSRD 199
>At1g60900 putative U2 snRNP auxiliary factor
Length = 589
Score = 76.6 bits (187), Expect = 2e-14
Identities = 62/190 (32%), Positives = 87/190 (45%), Gaps = 33/190 (17%)
Query: 70 TAPSDSDRKSQ----LQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRER 125
++P D KS+ L+ +K+ +K R +K R+ DR + +SR R RE+
Sbjct: 27 SSPFHEDSKSRESHDLKKDSSKISEKDNENGR--DKDGNKDRDREKDRDREKSRDRDREK 84
Query: 126 YRDRD-SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVD-------------RGRD 171
RDRD R RS+ R+R+ + DR RDR R+ RS R D D D R RD
Sbjct: 85 SRDRDRDRERSKDRQRDRHHRDRHRDRSRE--RSEKRDDLDDDHHRRSRDRDRRRSRDRD 142
Query: 172 RRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYD 231
R R R R + R RSR S R+ R S+ + R + K K G+D
Sbjct: 143 REVRHRRRSRSRSRSR--SERRSRSEHRHKSEHRSRSRSRSRSKSKRRS--------GFD 192
Query: 232 NMAPAERVKA 241
MAP + + A
Sbjct: 193 -MAPPDMLAA 201
>At2g40650 unknown protein
Length = 355
Score = 73.6 bits (179), Expect = 2e-13
Identities = 59/169 (34%), Positives = 79/169 (45%), Gaps = 23/169 (13%)
Query: 95 ESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS-RSRERN-SRYSDRDRDRD 152
E ++ N + D +R +S RER RDRD RR S R R+R+ R D DRD D
Sbjct: 189 EEEEEKEENEGIADGSEDEMDQRRKSPERERERDRDRRRDSHRHRDRDYDRDYDMDRDHD 248
Query: 153 RDSGRSRSRSDSDVDRGRDR---RKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKE--- 206
RD R R D DR RDR R+R+R RE+GR R R R +RRS +S D K
Sbjct: 249 RDYERERGHG-RDRDRERDRDHYRERDRDRERGRDRERDRRDRARRRSRSRSRDRKRHET 307
Query: 207 ---------RGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQ 246
+ K + K K G D H +A R++A + ++
Sbjct: 308 DDVRDREEPKKKKEKKEKMKEDGTD-----HPNPEIAEMNRLRASLGMK 351
Score = 57.8 bits (138), Expect = 9e-09
Identities = 43/137 (31%), Positives = 62/137 (44%), Gaps = 17/137 (12%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYS-SRDSDRRKRRSRSRSRERYRDRDSR 132
D RKS + + ++ + +RDY RD DR R R R+R R+RD
Sbjct: 209 DQRRKSPERERERDRDRRRDSHRHRDRDYDRDYDMDRDHDRDYERERGHGRDRDRERD-- 266
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPR 192
Y +RDRDR+R R R R DR R RR R R R++ R + V R
Sbjct: 267 --------RDHYRERDRDRERGRDRERDRR----DRAR-RRSRSRSRDRKRHETDDVRDR 313
Query: 193 KQ-RRSEVKSSDVKERG 208
++ ++ + K +KE G
Sbjct: 314 EEPKKKKEKKEKMKEDG 330
Score = 34.3 bits (77), Expect = 0.11
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 103 NRDYSSRDSDRRKRRSRSRSRERY-----RDRDSRRRSRSRERNSRYSDRDRDRDRDSGR 157
+R+ RD RR+ RSRSR R+R+ RDR+ ++ + ++ + D +
Sbjct: 282 DRERDRRDRARRRSRSRSRDRKRHETDDVRDREEPKKKKEKKEKMKEDGTDHPNPEIAEM 341
Query: 158 SRSRSDSDVDRGRD 171
+R R+ + RD
Sbjct: 342 NRLRASLGMKPLRD 355
>At5g53440 putative protein
Length = 1181
Score = 72.4 bits (176), Expect = 4e-13
Identities = 50/157 (31%), Positives = 75/157 (46%), Gaps = 9/157 (5%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D K L+S + + + +S+ + + + D R R+R +R DR+ R
Sbjct: 260 DRPTKEHLRSDEKLTRDESKKKSKFQDNDHGHEPDSELDGYHERERNRDYDRESDRNERD 319
Query: 134 RSRSRERNSRYS-DRDRDRDRDSGRSRSRSDSDVDRGRDR---RKRERGREKGRRRSRSV 189
R R+R+R+ Y DRDRDRDRD R R R D + DR DR R R R R++ R R+
Sbjct: 320 RERTRDRDRDYERDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDRDHERDRTH 379
Query: 190 SPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKL 226
K R S D GK S+ + ++ D ++L
Sbjct: 380 DREKDR-----SRDYYHDGKRSKSDRERDNDRDVSRL 411
Score = 67.0 bits (162), Expect = 2e-11
Identities = 57/165 (34%), Positives = 77/165 (46%), Gaps = 11/165 (6%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR-----RSRSRSRERYRD 128
+S +KS+ Q + + + + NRDY R+SDR +R R R R ER RD
Sbjct: 277 ESKKKSKFQDNDHGHEPDSELDGYHERERNRDYD-RESDRNERDRERTRDRDRDYERDRD 335
Query: 129 RD-SRRRSRSRERNSRYSDRDRDRDRDSGRSRSRS-DSDVDRGRDRRKRERGREKGRRRS 186
RD R R R R+R DR DRD D RSR R D + DR DR K +R R+
Sbjct: 336 RDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDRDHERDRTHDREK-DRSRDYYHDGK 394
Query: 187 RSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVG--VDYAKLIHG 229
RS S R++ S + G+ + R G+ DY +I G
Sbjct: 395 RSKSDRERDNDRDVSRLDDQSGRYKDRRDGRRSPDYQDYQDVITG 439
Score = 60.5 bits (145), Expect = 1e-09
Identities = 84/306 (27%), Positives = 111/306 (35%), Gaps = 77/306 (25%)
Query: 103 NRDYS-SRDSDRRKRRSRSRSR-----ERYRDRD-SRRRSRSRERN---SRYSDRDRDRD 152
+RDY RD DR + R R R R +RY DRD R RSR R+R+ R DR++DR
Sbjct: 327 DRDYERDRDRDRDRDRERDRDRRDYEHDRYHDRDWDRDRSRDRDRDHERDRTHDREKDRS 386
Query: 153 R----DSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSR--------------------- 187
R D RS+S + D DR R + GR K RR R
Sbjct: 387 RDYYHDGKRSKSDRERDNDRDVSRLDDQSGRYKDRRDGRRSPDYQDYQDVITGSRSSRVE 446
Query: 188 ----SVSPRKQRRSEV----------------KSSDVKERGKGSEMRKGKNVGVDYAKLI 227
P +Q S V S +V E GSE + V A +
Sbjct: 447 PDGDMTRPERQLSSSVVQEENGNASDQITKGASSREVAELSGGSERGTRQKVSEKTANME 506
Query: 228 HGYDNMAPAER---VKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDA 284
G PAER KA + + + + S ER N+ EVE
Sbjct: 507 DGVLGEFPAERSFAAKASPRPMVERSPSSTS-----LERRYNNRGGARRSIEVEE----- 556
Query: 285 SLVKHIGQSFRFSAVESKREDQIQAAHDEAMFGAPA-------PPPPTSSTDSEPERENE 337
H + +SA E +R + + E F A PP P S + R
Sbjct: 557 --TGHRNNARDYSATEEERHLVDETSQAELSFNNKANQNNSSFPPRPESRSGVSSPRVGP 614
Query: 338 KEVDNK 343
+E DN+
Sbjct: 615 REEDNR 620
Score = 53.5 bits (127), Expect = 2e-07
Identities = 70/325 (21%), Positives = 117/325 (35%), Gaps = 72/325 (22%)
Query: 68 STTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTN-----------------RDYSSRD 110
+T SDS++++ L+ + K K++ +T RVS+++ +Y+S
Sbjct: 15 ATKEYSDSEKETSLK--EKKSKEESSTTVRVSKESGSGDKRKEYYDSVNGEYYEEYTSSS 72
Query: 111 SDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGR 170
S RRK +S +R+ +D + S ++ S++ R RD G +S D
Sbjct: 73 SKRRKGKSGESGSDRWNGKDD-DKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSD--- 128
Query: 171 DRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGY 230
+ RE RR S+ V K R+ + GK + G D+ K G
Sbjct: 129 -----GKHRESSRRESKDVDKEKDRK--------YKEGKSDKFYDGD----DHHKSKAGS 171
Query: 231 DNMAPAERVKAKMKLQLSETAARD----SDRGVGWERFEFNKDAPLDDEEVEGAEDDASL 286
D + A+ + T R D G G + + + D + D + +D
Sbjct: 172 DKTESKAQDHARSPGTENYTEKRSRRKRDDHGTGDKHHDNSDD--VGDRVLTSGDDYIKD 229
Query: 287 VKHIGQSFRFSAVESKREDQIQAAHDEAMFGAPAPP------------------------ 322
KH G+ R E K E+ I+ D+ P
Sbjct: 230 GKHKGEKSRDKYREDKEEEDIKQKGDKQRDDRPTKEHLRSDEKLTRDESKKKSKFQDNDH 289
Query: 323 --PPTSSTDSEPERENEKEVDNKKD 345
P S D ERE ++ D + D
Sbjct: 290 GHEPDSELDGYHERERNRDYDRESD 314
Score = 37.7 bits (86), Expect = 0.010
Identities = 47/238 (19%), Positives = 91/238 (37%), Gaps = 13/238 (5%)
Query: 47 SSSSFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDY 106
SSSS + S S +S +K+++ S +++ + + E D
Sbjct: 70 SSSSKRRKGKSGESGSDRWNGKDDDKGESSKKTKVSSEKSRKRDEGDGEETKKSSGKSDG 129
Query: 107 SSRDSDRRKRRSRSRSRER-YRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD 165
R+S RR+ + + ++R Y++ S + + + + D+ + +RS +
Sbjct: 130 KHRESSRRESKDVDKEKDRKYKEGKSDKFYDGDDHHKSKAGSDKTESKAQDHARSPGTEN 189
Query: 166 VDRGRDRRKRE--RGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGS--EMRKGKNVGV 221
R RRKR+ +K S V R + D K +G+ S + R+ K
Sbjct: 190 YTEKRSRRKRDDHGTGDKHHDNSDDVGDRVLTSGDDYIKDGKHKGEKSRDKYREDKEEED 249
Query: 222 DYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEG 279
K D+ E +++ KL E+ + +F+ N D E++G
Sbjct: 250 IKQKGDKQRDDRPTKEHLRSDEKLTRDESKKK--------SKFQDNDHGHEPDSELDG 299
>At4g36690 splicing factor like protein
Length = 573
Score = 71.2 bits (173), Expect = 8e-13
Identities = 58/161 (36%), Positives = 81/161 (50%), Gaps = 24/161 (14%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEK-TNRDYSSRDSDRRKRRSRSRSRE-----RYR 127
D + + I+++L KP ESR E+ T+R S+D +R K R + R R+ R R
Sbjct: 19 DEENGGRDGEIEDQLDSKPKRESRDHERETSR---SKDREREKGRDKDRERDSEVSRRSR 75
Query: 128 DRD---SRRRSRSRERNSR----YSDRDRDRDRDSGRSR---SRSDSDVDRGRDRRKRER 177
DRD S+ RSR ++R+ R S R RD R+ G R R D D R RDR R
Sbjct: 76 DRDGEKSKERSRDKDRDHRERHHRSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRR 135
Query: 178 GREKGRRRSRSVSPRKQRRSEVKS-----SDVKERGKGSEM 213
++G RRSR R + RSE ++ S K+R G +M
Sbjct: 136 RDDRGGRRSRRSRSRSKDRSERRTRSRSPSKSKQRVSGFDM 176
Score = 62.0 bits (149), Expect = 5e-10
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 14/126 (11%)
Query: 95 ESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRD 154
E ++ K R+ SRD +R RS+ R RE+ RD+D RER+S S R RDRD +
Sbjct: 30 EDQLDSKPKRE--SRDHERETSRSKDREREKGRDKD-------RERDSEVSRRSRDRDGE 80
Query: 155 SGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMR 214
+ RSR D+ RD R+R + R SR R++R + R + + R
Sbjct: 81 KSKERSR-----DKDRDHRERHHRSSRHRDHSRERGERRERGGRDDDDYRRSRDRDHDRR 135
Query: 215 KGKNVG 220
+ G
Sbjct: 136 RDDRGG 141
Score = 28.1 bits (61), Expect = 8.0
Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 3/71 (4%)
Query: 144 YSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSD 203
Y + + RD G + DS R +RE R K R R + ++R SEV
Sbjct: 18 YDEENGGRD---GEIEDQLDSKPKRESRDHERETSRSKDREREKGRDKDRERDSEVSRRS 74
Query: 204 VKERGKGSEMR 214
G+ S+ R
Sbjct: 75 RDRDGEKSKER 85
>At5g64200 unknown protein
Length = 303
Score = 69.7 bits (169), Expect = 2e-12
Identities = 58/177 (32%), Positives = 84/177 (46%), Gaps = 23/177 (12%)
Query: 34 SNDAVPKPGSSLVSSSSFLSQFVK-ASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKP 92
++ AV + +V QF K ++ + P R+S+ +S +
Sbjct: 70 AHKAVERLDGRVVDGREITVQFAKYGPNAEKISKGRVVEPPPKSRRSRSRSPRRSR---- 125
Query: 93 TTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSR--ERNSRYSDRDRD 150
S + +R R S RR R R RSR+ YR++D R+RSRSR +R R+ ++DRD
Sbjct: 126 ------SPRRSRSPPRRRSPRRSRSPRRRSRDDYREKDYRKRSRSRSYDRRERHEEKDRD 179
Query: 151 RDRDSGRSRSRSDSDVDRGRDRRKRERGR--EKGRRRSRSVSPRKQRRSEVKSSDVK 205
R R+RSRS S D ++R RGR + R SRS+S RRS SS K
Sbjct: 180 HRR---RTRSRSASP-----DEKRRVRGRYDNESRSHSRSLSASPARRSPRSSSPQK 228
Score = 40.4 bits (93), Expect = 0.002
Identities = 44/128 (34%), Positives = 57/128 (44%), Gaps = 22/128 (17%)
Query: 133 RRSRSRE-RNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKG-RRRSRSVS 190
RRSRSR R SR R R R RSRS RR R+ REK R+RSRS S
Sbjct: 114 RRSRSRSPRRSRSPRRSRSPPRRRSPRRSRSPR-------RRSRDDYREKDYRKRSRSRS 166
Query: 191 PRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHG-YDNMAPAERVKAKMKLQLSE 249
++ R E K D + R + ++ D + + G YDN + + LS
Sbjct: 167 YDRRERHEEKDRDHRRR------TRSRSASPDEKRRVRGRYDNESRSH------SRSLSA 214
Query: 250 TAARDSDR 257
+ AR S R
Sbjct: 215 SPARRSPR 222
>At3g50670 U1 snRNP 70K protein
Length = 427
Score = 69.7 bits (169), Expect = 2e-12
Identities = 51/159 (32%), Positives = 75/159 (47%), Gaps = 14/159 (8%)
Query: 89 KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRE------RYRDRDSRRRSR-SRERN 141
+++P + SE+ +R R+ R K + R RSRE R R RD R + R+R+
Sbjct: 245 EQQPQGRTSQSEEPSRPREEREKSREKGKERERSRELSHEQPRERSRDRPREDKHHRDRD 304
Query: 142 SRYSDRDRDRDRDSGRSRSRSD---SDVDRGRDRRKRERGREKGRRRSRSVSPRKQRR-- 196
DRDRD RD R+R R D D DRGRDR R+ R++ R++ R +
Sbjct: 305 QGGRDRDRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYEHEG 364
Query: 197 -SEVKSSDVKERGKGSEMR-KGKNVGVDYAKLIHGYDNM 233
+ D + RG+ E R ++ D + H YD M
Sbjct: 365 GGRSRERDAEYRGEPEETRGYYEDDQGDTDRYSHRYDKM 403
Score = 42.7 bits (99), Expect = 3e-04
Identities = 35/119 (29%), Positives = 51/119 (42%), Gaps = 15/119 (12%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRE--------- 124
D DR S+ +++ + + + R ++ RD +SRD DR + R + R E
Sbjct: 309 DRDRDSRRD--RDRTRDRGDRDRRDRDR-GRDRTSRDHDRDRSRKKERDYEGGEYEHEGG 365
Query: 125 -RYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD--VDRGRDRRKRERGRE 180
R R+RD+ R E Y D D DR S R + D +R R KR RE
Sbjct: 366 GRSRERDAEYRGEPEETRGYYEDDQGDTDRYSHRYDKMEEDDFRYEREYKRSKRSESRE 424
>At1g20920 putative RNA helicase
Length = 1166
Score = 68.6 bits (166), Expect = 5e-12
Identities = 63/231 (27%), Positives = 101/231 (43%), Gaps = 25/231 (10%)
Query: 74 DSDRKSQLQSIQN--KLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS 131
D DR ++ + + K ++K + RV + D RD D + + + + RER R
Sbjct: 28 DRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRKEKERERRRRDKD 87
Query: 132 RRRSRSRERNSRYSDRD------RDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRR 185
R + RS R S S+ D RD+ R + + R + + DRG+D RKR+R RE+ + +
Sbjct: 88 RVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKD-RKRDREREERKDK 146
Query: 186 SRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKL 245
R ++RR + KER K E R+ ++ D ER K +
Sbjct: 147 EREREKDRERREREREEREKERVKERERREREDGERD------------RREREKERGSR 194
Query: 246 QLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAE-DDASLVKHIGQSFR 295
+ E R+ R VG E + + L EG E + K +G+S R
Sbjct: 195 RNRE---RERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSR 242
Score = 67.4 bits (163), Expect = 1e-11
Identities = 40/134 (29%), Positives = 61/134 (44%), Gaps = 11/134 (8%)
Query: 89 KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSR--------RRSRSRER 140
K + R K +D +RR+R R +ER ++R+ R RR R +ER
Sbjct: 132 KDRKRDREREERKDKEREREKDRERREREREEREKERVKERERREREDGERDRREREKER 191
Query: 141 NSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVK 200
SR R+R+R+R SD DV R RR++E G K + R +SV + K
Sbjct: 192 GSR---RNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSRHEDSPK 248
Query: 201 SSDVKERGKGSEMR 214
V++ G+ E +
Sbjct: 249 RKSVEDNGEKKEKK 262
Score = 66.6 bits (161), Expect = 2e-11
Identities = 54/184 (29%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 95 ESRVSEKTNRDYSSRDSDRRKRRSRSR----SRERYRDRDSR--RRSRSRERNSRYSDRD 148
E ++ R+ RD DR KRRS R S + + D R RR +ER R +RD
Sbjct: 70 EREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERD 129
Query: 149 RDRDRDSGRSR-SRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKER 207
R +DR R R R D + +R +DR +RER RE+ R V R++R E D +ER
Sbjct: 130 RGKDRKRDREREERKDKEREREKDRERREREREE--REKERVKERERREREDGERDRRER 187
Query: 208 GKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFN 267
K E +N + ++ + ++ +R + + + E ++ ++ VG R +
Sbjct: 188 EK--ERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVG--RSSRH 243
Query: 268 KDAP 271
+D+P
Sbjct: 244 EDSP 247
Score = 54.7 bits (130), Expect = 8e-08
Identities = 62/278 (22%), Positives = 117/278 (41%), Gaps = 15/278 (5%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDR--DS 131
D +R+ + + + + ++ R SE+ S D + R + R E+ R
Sbjct: 68 DEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHE 127
Query: 132 RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRR-RSRSVS 190
R R + R+R DR+R+ +D R R + +R R+ R++ER +E+ RR R
Sbjct: 128 RDRGKDRKR-----DREREERKDKEREREKDRERREREREEREKERVKERERREREDGER 182
Query: 191 PRKQRRSEVKSSDVKERGKGSEM---RKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQL 247
R++R E S +ER + E+ +V D + ER K+ +
Sbjct: 183 DRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSR 242
Query: 248 SE-TAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHI--GQSFRFSAVESKRE 304
E + R S G ++ + ++ L+DE+ + E+ + + Q + E++ E
Sbjct: 243 HEDSPKRKSVEDNGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAESE 302
Query: 305 DQIQAAHDEAMFG-APAPPPPTSSTDSEPERENEKEVD 341
+ A +E G A + + PE ++E E+D
Sbjct: 303 SKGDADGNEPKAGKAWTLEGESDDEEGHPEEKSETEMD 340
Score = 53.1 bits (126), Expect = 2e-07
Identities = 40/143 (27%), Positives = 63/143 (43%), Gaps = 25/143 (17%)
Query: 98 VSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRR----SRSRERNSRYSDRDRDRDR 153
V E+ + S RD DR R + + E+ R++D R++ S S + R D +R++ +
Sbjct: 16 VEEEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSEDDYDRDDDEEREKRK 75
Query: 154 DSGRSRSRSDSD-VDRGRDRRK-----------------RERGREKGRR---RSRSVSPR 192
+ R R R D D V R +RRK R +E+G R R R +
Sbjct: 76 EKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKDRK 135
Query: 193 KQRRSEVKSSDVKERGKGSEMRK 215
+ R E + +ER K E R+
Sbjct: 136 RDREREERKDKEREREKDRERRE 158
Score = 51.6 bits (122), Expect = 7e-07
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 36/224 (16%)
Query: 106 YSSRDSD--------RRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGR 157
Y S D D ++ RR R RS ER +D+ S +R R++DR R
Sbjct: 8 YRSEDLDVVEEEADLKKSRRDRDRSNERKKDKGSEKR--------------REKDRRKKR 53
Query: 158 SRSRSDSDVDRGRDR-RKRERGREKGRRRSRSVSPRKQRRSE-VKSSDVKERGKGSEMRK 215
+S SDS+ D RD +RE+ +EK R R R R +RRSE KSSD ++ + + R
Sbjct: 54 VKS-SDSEDDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERD 112
Query: 216 GKNV-----GVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDA 270
+ V G + G D ER + K K + E +R ER E K+
Sbjct: 113 KRRVNEKERGHREHERDRGKDRKRDREREERKDKEREREKDRERRER----EREEREKER 168
Query: 271 PLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQAAHDEA 314
+ E E +D + + R S +RE + ++E+
Sbjct: 169 VKERERRE--REDGERDRREREKERGSRRNRERERSREVGNEES 210
Score = 51.2 bits (121), Expect = 9e-07
Identities = 50/243 (20%), Positives = 102/243 (41%), Gaps = 37/243 (15%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRS-----RSRSRERYRD 128
D +R+ + + + +++ + RV E+ R+ + DRR+R R+R RER R+
Sbjct: 145 DKEREREKDRERREREREEREKERVKERERREREDGERDRREREKERGSRRNRERERSRE 204
Query: 129 -----------------------RDSRRRSRSRERNSRYSDRDRDRD-RDSGRSRSRSDS 164
R + R +S R+SR+ D + + D+G + +
Sbjct: 205 VGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRSSRHEDSPKRKSVEDNGEKKEKKTR 264
Query: 165 DVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYA 224
+ + +++K + EK RRR + K+++ E + S+ K G+E + GK A
Sbjct: 265 EEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAE-SESKGDADGNEPKAGK------A 317
Query: 225 KLIHG-YDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDD 283
+ G D+ K++ ++ + E ++D E A + + +GA D+
Sbjct: 318 WTLEGESDDEEGHPEEKSETEMDVDEETKPENDGDAKMVDLENETAATVSESGGDGAVDE 377
Query: 284 ASL 286
+
Sbjct: 378 EEI 380
Score = 34.3 bits (77), Expect = 0.11
Identities = 50/199 (25%), Positives = 73/199 (36%), Gaps = 50/199 (25%)
Query: 142 SRYSDRDRDR-DRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVK 200
S+Y D D + ++ +SR D D R ER ++KG + R RK+R VK
Sbjct: 6 SKYRSEDLDVVEEEADLKKSRRDRD-------RSNERKKDKGSEKRREKDRRKKR---VK 55
Query: 201 SSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGVG 260
SSD ++ YD ER K K K + E RD DR
Sbjct: 56 SSDSED----------------------DYDRDDDEEREKRKEKER--ERRRRDKDRVK- 90
Query: 261 WERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQAAHDEAMFGAPA 320
R E K + +D+ E E D V + R + ++ + +E
Sbjct: 91 -RRSERRKSSDSEDDVEEEDERDKRRVNEKERGHREHERDRGKDRKRDREREE------- 142
Query: 321 PPPPTSSTDSEPERENEKE 339
D E ERE ++E
Sbjct: 143 ------RKDKEREREKDRE 155
>At3g49600 putative protein
Length = 1672
Score = 67.8 bits (164), Expect = 9e-12
Identities = 68/283 (24%), Positives = 121/283 (42%), Gaps = 40/283 (14%)
Query: 74 DSDRKSQLQSIQNK-LKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSR 132
DS RK + + K K K + + R + + D R +K+ S+ R + + D
Sbjct: 176 DSGRKKVDEDVDEKDAKVKESKKQRGGDDDDVDVVKR---HKKKESKKRRHDDSSESDEH 232
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRG--RDRRKRERGREKGRRRSRSVS 190
R R R + R ++ + DS S S SDSD D G R R+K + +K RR RSVS
Sbjct: 233 GRDRRRRSKKKAKGRKQESESDSSSSDSESDSDSDDGKKRGRKKPTKTTKKRSRRKRSVS 292
Query: 191 PRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLSET 250
+ EV+S D K KL + P+ R +K +L +
Sbjct: 293 SESE---EVESDDSK-------------------KLRKSHKKSLPSNRSGSK---ELRD- 326
Query: 251 AARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQAA 310
D G +R + + P +ED+ ++ +++R + + ++ ++A
Sbjct: 327 -KHDEQSRAGRKRHDSDVSEP-------ESEDNKQPLRKKEEAYRGGQKQKRDDEDVEAD 378
Query: 311 HDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSSLLSE 353
H + + S DSE E +N+K++ +K ++ S+ +S+
Sbjct: 379 HLKDRYTRDDKKAARDSDDSEIEYQNKKQLRSKVEVYSAGMSQ 421
Score = 42.7 bits (99), Expect = 3e-04
Identities = 33/151 (21%), Positives = 69/151 (44%), Gaps = 9/151 (5%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
K + + S ++ SDS+ S + + +KKPT ++ + R SS +S+ +
Sbjct: 242 KKAKGRKQESESDSSSSDSESDSDSDDGKKRGRKKPTKTTKKRSRRKRSVSS-ESEEVES 300
Query: 117 RSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRE 176
+ R+ ++ RS S+E ++ ++ R +GR R SD D ++
Sbjct: 301 DDSKKLRKSHKKSLPSNRSGSKELRDKHDEQSR-----AGRKRHDSDVSEPESEDNKQPL 355
Query: 177 RGREKGRRRSRSVSPRKQRRSEVKSSDVKER 207
R +E+ R + +K+ +V++ +K+R
Sbjct: 356 RKKEEAYRGGQK---QKRDDEDVEADHLKDR 383
Score = 37.7 bits (86), Expect = 0.010
Identities = 40/160 (25%), Positives = 59/160 (36%), Gaps = 21/160 (13%)
Query: 71 APSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD 130
A D + + Q+ + K + +S+K + + K RS SR +E RD D
Sbjct: 392 ARDSDDSEIEYQNKKQLRSKVEVYSAGMSQKRKEEEDVTKHGKDKYRSDSRGKEVARDSD 451
Query: 131 S-------------------RRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRD 171
R+ R + ++ RDR R D+ + D DR R
Sbjct: 452 DSEAEYENRKKLKNESYQRGRKHKREEDEDNDNHGRDRYRGDDAVKRYGTIKEDDDRYRG 511
Query: 172 RRKRERG-REKGRRRSRSVSPRKQRRSEVKSSDVKERGKG 210
R E G ++GR R R S K E K + RG G
Sbjct: 512 RAIEEEGDDDRGRYRPRRESV-KDDEEEYKHGRDRYRGDG 550
Score = 33.5 bits (75), Expect = 0.19
Identities = 39/150 (26%), Positives = 59/150 (39%), Gaps = 13/150 (8%)
Query: 71 APSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRD 130
A ++ +K + +S Q K K E ++ RD D ++ + +RYR R
Sbjct: 455 AEYENRKKLKNESYQRGRKHK-REEDEDNDNHGRDRYRGDDAVKRYGTIKEDDDRYRGRA 513
Query: 131 SRRRS---RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGR-----DRRKRERG-REK 181
R R R R S +D + + GR R R D G+ DR RER +
Sbjct: 514 IEEEGDDDRGRYRPRRESVKDDEEEYKHGRDRYRGDGRRATGKEDDDDDRVSREREYSSR 573
Query: 182 GRRR---SRSVSPRKQRRSEVKSSDVKERG 208
GR R SRS R + + ++ G
Sbjct: 574 GRSRYDDSRSSGKRSSHGFSIVTGEISGGG 603
Score = 30.0 bits (66), Expect = 2.1
Identities = 17/92 (18%), Positives = 37/92 (39%)
Query: 96 SRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDS 155
+R +K RD + + + ++ E Y S++R + D+ R R
Sbjct: 385 TRDDKKAARDSDDSEIEYQNKKQLRSKVEVYSAGMSQKRKEEEDVTKHGKDKYRSDSRGK 444
Query: 156 GRSRSRSDSDVDRGRDRRKRERGREKGRRRSR 187
+R DS+ + ++ + ++GR+ R
Sbjct: 445 EVARDSDDSEAEYENRKKLKNESYQRGRKHKR 476
>At2g16940 splicing factor like protein
Length = 561
Score = 67.0 bits (162), Expect = 2e-11
Identities = 50/134 (37%), Positives = 70/134 (51%), Gaps = 13/134 (9%)
Query: 87 KLKKKPTTESRVSEKTNRDYSSRDSD---RRKRRSRS--RSRERYRDRDSRRRSRSRERN 141
K+K + SR S RD D RR +RSRS RSR R R+RD R SR
Sbjct: 30 KVKSEGKERSRSSRHRGDKKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSR----- 84
Query: 142 SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGR-RRSRSVSPRKQRRSEVK 200
+ DRDR++D D R+ D + DR +DR + R EK R RRSRS S R + + K
Sbjct: 85 -EHRDRDREKDVDK-EERNGKDRERDRDKDRDSKGRDHEKDRSRRSRSRSERHRSQEREK 142
Query: 201 SSDVKERGKGSEMR 214
S +++ + + ++ R
Sbjct: 143 SLEIEPKERETKDR 156
Score = 48.9 bits (115), Expect = 4e-06
Identities = 37/129 (28%), Positives = 60/129 (45%), Gaps = 14/129 (10%)
Query: 87 KLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS---------RRRSRS 137
K ++ + R S+++ + SR DR + R RS R RDR+ + R R
Sbjct: 49 KKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSREHRDRDREKDVDKEERNGKDRERD 108
Query: 138 RERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRS 197
R+++ RD ++DR S RSRSRS +R R + + + + + R R +RR
Sbjct: 109 RDKDRDSKGRDHEKDR-SRRSRSRS----ERHRSQEREKSLEIEPKERETKDRDRDRRRH 163
Query: 198 EVKSSDVKE 206
+ K D E
Sbjct: 164 KDKKEDKVE 172
Score = 47.4 bits (111), Expect = 1e-05
Identities = 30/101 (29%), Positives = 48/101 (46%), Gaps = 7/101 (6%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDR-RKRRSRSRSRERYRDRDSR 132
D DR+ + + K + + +RD RD ++ R RRSRSRS ER+R ++
Sbjct: 88 DRDREKDVDKEERNGKDRERDRDK-----DRDSKGRDHEKDRSRRSRSRS-ERHRSQERE 141
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRR 173
+ + DRDRDR R + + + + D RD+R
Sbjct: 142 KSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEADPERDQR 182
Score = 43.1 bits (100), Expect = 2e-04
Identities = 32/128 (25%), Positives = 54/128 (42%), Gaps = 5/128 (3%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D R + +S + + S + +RD R+ D K + RER RD+D
Sbjct: 57 DGRRSKRSRSHHRSRSRDRERDRHRSSREHRD-RDREKDVDKEERNGKDRERDRDKDRDS 115
Query: 134 RSRSRERN-SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSR---SV 189
+ R E++ SR S +R R R +S +R R R+R R K ++ +
Sbjct: 116 KGRDHEKDRSRRSRSRSERHRSQEREKSLEIEPKERETKDRDRDRRRHKDKKEDKVEPEA 175
Query: 190 SPRKQRRS 197
P + +R+
Sbjct: 176 DPERDQRT 183
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/136 (25%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Query: 124 ERYRDRDSRRRSRSRERNSRYSDRDRDRD-RDSGRSRSRSDS-DVDRGRDRRKRERGREK 181
E+ + R SR R + +RD D D R S RSRS S DR RDR + R +
Sbjct: 29 EKVKSEGKERSRSSRHRGDKKKERDEDEDGRRSKRSRSHHRSRSRDRERDRHRSSR-EHR 87
Query: 182 GRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKA 241
R R + V ++ + + K+R KG++ D ++ ++ +
Sbjct: 88 DRDREKDVDKEERNGKDRERDRDKDRDS-----KGRDHEKDRSRRSRSRSERHRSQEREK 142
Query: 242 KMKLQLSETAARDSDR 257
++++ E +D DR
Sbjct: 143 SLEIEPKERETKDRDR 158
Score = 32.7 bits (73), Expect = 0.32
Identities = 24/92 (26%), Positives = 37/92 (40%), Gaps = 16/92 (17%)
Query: 128 DRDSRRRSRSRERNSRY-SDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRS 186
D + + R R+SR+ D+ ++RD D D R+ +R R R RS
Sbjct: 28 DEKVKSEGKERSRSSRHRGDKKKERDEDE---------------DGRRSKRSRSHHRSRS 72
Query: 187 RSVSPRKQRRSEVKSSDVKERGKGSEMRKGKN 218
R + R S +E+ E R GK+
Sbjct: 73 RDRERDRHRSSREHRDRDREKDVDKEERNGKD 104
>At5g37370 unknown protein
Length = 393
Score = 66.2 bits (160), Expect = 3e-11
Identities = 55/189 (29%), Positives = 87/189 (45%), Gaps = 10/189 (5%)
Query: 59 SSSSTTTTASTTAPSDSDRKSQL-----QSIQNKLKKKPTTESRVSEKTNRDYSSRDSDR 113
S+ T + TA K+ L Q ++ + ++ R T D + D +
Sbjct: 182 STGDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQ 241
Query: 114 RKRRSRSRSRERYRDRDS-RRRSRSRERN---SRYSDRDRDRDRDSGRSRSRSDSDVDRG 169
++ RS+SR+ Y DRDS R+R R RE++ R DR R+R+RD G R RS D D
Sbjct: 242 QRSPRRSQSRDYYSDRDSDRQREREREKDRERERGRDRYRERERDYGNDR-RSRRDYDSR 300
Query: 170 RDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHG 229
R E R + RRSRS S + R +++ +R ++ + V + AKL
Sbjct: 301 SRRNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKRDSSNKEKSAVTVNSNLAKLKDL 360
Query: 230 YDNMAPAER 238
Y + + +R
Sbjct: 361 YGDASSQKR 369
Score = 64.3 bits (155), Expect = 1e-10
Identities = 60/179 (33%), Positives = 87/179 (48%), Gaps = 19/179 (10%)
Query: 28 GFSTSTSNDAVPKPGSSLVSSS-SFLSQFVKASSSSTTTTASTTAPSDSDRKSQLQSIQN 86
G T S D +P S S S SF + +S+ ++ P+ DR + Q
Sbjct: 184 GDMTRGSEDTARRPPSVKASLSVSFGQRAPHRASTRGSSPVRRPPPTGYDRNGGDEVQQR 243
Query: 87 KLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSD 146
++ + + YS RDSDR++ R R + RER R RD R R RER+ +D
Sbjct: 244 SPRRSQSRDY---------YSDRDSDRQREREREKDRERERGRD---RYRERERDYG-ND 290
Query: 147 RDRDRDRDSGRSRSRSDSDVDRGR-DRRKRERGREKGR--RRSRSVSPRKQRRSEVKSS 202
R RD DS RSR R+D + DR R DRR R R R + R + R +P++ ++ KS+
Sbjct: 291 RRSRRDYDS-RSR-RNDYEDDRSRHDRRSRSRSRSRSRSVQIEREPTPKRDSSNKEKSA 347
>At1g28060 unknown protein
Length = 786
Score = 64.3 bits (155), Expect = 1e-10
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 101 KTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDS---GR 157
+++RD RDS R R R RD DS+RR R+SR DR+ +RDR GR
Sbjct: 8 RSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDHYRSSRRGDREDERDRTKDRRGR 67
Query: 158 SRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKER-----GKGSE 212
S R + + R R++ ER E G + S S RK R E + D K++ G G
Sbjct: 68 SVERGEREGSRDREKHHHERSHE-GSKEKESRSKRKDREEENGARDGKKKSRFADGNGER 126
Query: 213 MRKGKNVGVD 222
+ ++V ++
Sbjct: 127 RSRFEDVAIE 136
Score = 57.8 bits (138), Expect = 9e-09
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 1/112 (0%)
Query: 105 DYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDS 164
D RDSD R SR RE RDR RR RS ER R RDR++ +
Sbjct: 37 DSKRRDSDHY-RSSRRGDREDERDRTKDRRGRSVERGEREGSRDREKHHHERSHEGSKEK 95
Query: 165 DVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKG 216
+ R R+ E G G+++SR +RRS + ++ K +++ +G
Sbjct: 96 ESRSKRKDREEENGARDGKKKSRFADGNGERRSRFEDVAIEVENKDAQVSEG 147
Score = 47.0 bits (110), Expect = 2e-05
Identities = 34/94 (36%), Positives = 42/94 (44%), Gaps = 4/94 (4%)
Query: 120 SRSRERYRDRDSRRRSRSRERNSRYSDRDRD---RDRDSGRSRSRSDSDVDRGRDRRKRE 176
SRS RDRDS + R DRD D RD D RS R D + +R R + +R
Sbjct: 7 SRSHRDDRDRDSSPDHSPQREGGRRRDRDVDSKRRDSDHYRSSRRGDREDERDRTKDRRG 66
Query: 177 RGREKGRRR-SRSVSPRKQRRSEVKSSDVKERGK 209
R E+G R SR RS S + + R K
Sbjct: 67 RSVERGEREGSRDREKHHHERSHEGSKEKESRSK 100
Score = 36.6 bits (83), Expect = 0.022
Identities = 41/164 (25%), Positives = 63/164 (38%), Gaps = 11/164 (6%)
Query: 138 RERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRS 197
+ER SR DRDRD S R R RDR + R+ RS R+ R
Sbjct: 3 KERYSRSHRDDRDRDSSPDHSPQREGG---RRRDRDVDSKRRDSDHYRSSRRGDREDERD 59
Query: 198 EVKSSDVKERGKGSEMRKGKNVGV-DYAKLIHGYDNMAPAER-VKAKMKLQLSETAARDS 255
K +G + +G+ G D K H + E+ ++K K + E ARD
Sbjct: 60 RTKDR------RGRSVERGEREGSRDREKHHHERSHEGSKEKESRSKRKDREEENGARDG 113
Query: 256 DRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAV 299
+ + + + +D +E DA + + G + S V
Sbjct: 114 KKKSRFADGNGERRSRFEDVAIEVENKDAQVSEGSGATNPTSGV 157
>At4g02720 unknown protein
Length = 422
Score = 63.9 bits (154), Expect = 1e-10
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 34/289 (11%)
Query: 59 SSSSTTTTASTTAPSDSD----RKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRR 114
+S + + S+SD RK + +S ++K ++K + +S SE + S + DRR
Sbjct: 92 NSKGKERKGKSDSESESDGLRSRKRKSKSSRSKRRRKRSYDSD-SESEGSESDSEEEDRR 150
Query: 115 KRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGR--SRSRSDSDVDRGRDR 172
+RR S R++ R S R+ RS R ++YSD D D DS S S S + D
Sbjct: 151 RRRKSSSKRKKSRSSRSFRKKRSHRRKTKYSDSDESSDEDSKAEISASSSGEEEDTKSKS 210
Query: 173 RKRERGREKGRRRSRSVSPRKQRRSEVKSSD----VKERGKGS-------EMRKGKNVGV 221
++R++ + +RS+ + S+ D V E K + E++K K + +
Sbjct: 211 KRRKKSSDSSSKRSKGEKTKSGSDSDGTEEDSKMQVDETVKNTELELDEEELKKFKEM-I 269
Query: 222 DYAKLIHGYD------NMAPAERVKAKMKLQLSETAARDSDRGVG-----WERFEFNKDA 270
+ K D ++ P KA+ + + +R +
Sbjct: 270 ELKKKSSAVDEEEEEGDVGPMPLPKAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEV 329
Query: 271 PLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQAAHDE---AMF 316
L+ EE++ E D V + R +A+ ++E+Q+ +A D+ AMF
Sbjct: 330 GLNAEEIQKFE-DLGYVMSGSRHQRMNAIRIRKENQVYSAEDKRALAMF 377
Score = 55.5 bits (132), Expect = 5e-08
Identities = 57/245 (23%), Positives = 95/245 (38%), Gaps = 28/245 (11%)
Query: 66 TASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSD-----RRKRRSRS 120
T S + D IQ+K + S+ E+ + S +SD +RK +S
Sbjct: 63 TPSPPRDQNEDSDENADEIQDKNGGERDDNSKGKERKGKSDSESESDGLRSRKRKSKSSR 122
Query: 121 RSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGRE 180
R R R DS S E +S DR R R S R +SRS R RK+ R
Sbjct: 123 SKRRRKRSYDSDSESEGSESDSEEEDRRRRRKSSSKRKKSRS------SRSFRKKRSHRR 176
Query: 181 KGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVK 240
K + S + ++E+ +S E K + D + ++R K
Sbjct: 177 KTKYSDSDESSDEDSKAEISASSSGEEEDTKSKSKRRKKSSD-----------SSSKRSK 225
Query: 241 AKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVE 300
+ S++ + D + + N + LD+EE++ ++ L K + SAV+
Sbjct: 226 GEKTKSGSDSDGTEEDSKMQVDETVKNTELELDEEELKKFKEMIELKK------KSSAVD 279
Query: 301 SKRED 305
+ E+
Sbjct: 280 EEEEE 284
>At3g23900 unknown protein
Length = 989
Score = 63.9 bits (154), Expect = 1e-10
Identities = 53/187 (28%), Positives = 84/187 (44%), Gaps = 26/187 (13%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKR 116
K + + + S +D KS+ + +++ KK+ + SR RD +SR+SD K+
Sbjct: 650 KVKRRTRSRSRSVEDSADIKDKSRDEELKHH-KKRSRSRSREDRSKTRD-TSRNSDEAKQ 707
Query: 117 RSRSRSRERYRDRDSRRR------------SRSRERNSRYSDRDRDRDRDSGRSRSRSDS 164
+ R RSR R + D+ SR +R S+ D D D GRSRSRS
Sbjct: 708 KHRQRSRSRSLENDNGSHENVDVAQDNDLNSRHSKRRSKSLDEDYDMKERRGRSRSRSLE 767
Query: 165 DVDRGRDRRK----RERGREKGRRRSRSVSPRKQRRSEVKSSDVK--------ERGKGSE 212
+R + K R G + R RS+SV ++ E +S D K R SE
Sbjct: 768 TKNRSSRKNKLDEDRNTGSRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSSE 827
Query: 213 MRKGKNV 219
++G+++
Sbjct: 828 GKQGRDI 834
Score = 57.4 bits (137), Expect = 1e-08
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 59 SSSSTTTTASTTAPSD-SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRR 117
S + T T+ SD + +K + +S L+ + V + D +SR S KRR
Sbjct: 688 SREDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNGSHENVDVAQDNDLNSRHS---KRR 744
Query: 118 SRSRSRERYRDRDSRRRSRSR-----ERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR 172
S+S E Y ++ R RSRSR R+SR + D DR+ S R RSRS S V+ R
Sbjct: 745 SKSLD-EDYDMKERRGRSRSRSLETKNRSSRKNKLDEDRNTGSRRRRSRSKS-VEGKRSY 802
Query: 173 RKRERGREK-----GRRRSRSVSPRKQRRSEVKSS-DVKERGKGSEMRKGKNVGVDYAKL 226
K R R+K RRSRS S ++ +++SS + K R ++ ++
Sbjct: 803 NKETRSRDKKSKRRSGRRSRSPSSEGKQGRDIRSSPGYSDEKKSRHKRHSRSRSIE---- 858
Query: 227 IHGYDNMAPAERVKAKMKLQLSETAARDSDRG 258
N + +R K +L+ S + RD RG
Sbjct: 859 ---KKNSSRDKRSKRHERLR-SSSPGRDKRRG 886
Score = 56.6 bits (135), Expect = 2e-08
Identities = 69/225 (30%), Positives = 98/225 (42%), Gaps = 54/225 (24%)
Query: 94 TESRVSEKTNRDYSSRDSDRRKRRSRSRSRE---------RYRDRDSRRRSRSRERNSR- 143
T++R S K D R++ R+RRSRS+S E R RD+ S+RRS R R+
Sbjct: 768 TKNRSSRKNKLD-EDRNTGSRRRRSRSKSVEGKRSYNKETRSRDKKSKRRSGRRSRSPSS 826
Query: 144 -------------YSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRER------GREKGRR 184
YSD + R + RSRS + R + ++ ER GR+K RR
Sbjct: 827 EGKQGRDIRSSPGYSDEKKSRHKRHSRSRSIEKKNSSRDKRSKRHERLRSSSPGRDK-RR 885
Query: 185 RSRSVSPRKQRRSEVKSSD--VKERGKGSEMRKGKNVGVDYAKLIHGYDN--MAPAERVK 240
RS+SP V S D +K+R GS+ K K DY K+ G N + ER
Sbjct: 886 GDRSLSP-------VSSEDHKIKKRHSGSKSVKEKPHS-DYEKVDDGDANSDSSQQERNL 937
Query: 241 AKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVE--GAEDD 283
L L +++D ++ +K+ P VE A DD
Sbjct: 938 EGHLLSLDSMSSQDVEK---------SKENPPSSSSVERGDANDD 973
Score = 56.2 bits (134), Expect = 3e-08
Identities = 78/326 (23%), Positives = 129/326 (38%), Gaps = 46/326 (14%)
Query: 71 APSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRER-YRDR 129
+P+ S KS+ + ++ PT + R + SR R +RRS R R YRD
Sbjct: 513 SPARSRSKSKSPISYRRRRRSPTYSPPF--RRPRSHRSRSPLRYQRRSTYEGRRRSYRDS 570
Query: 130 ----DSRRRSRSRERNSRYSDRDRD---RDRDSGR-----SRSRSDSDVDRGRDRRKRER 177
+SRR RS E +S S R R + R SG+ SR R DS RG + R
Sbjct: 571 RDISESRRYGRSDEHHSSSSRRSRSVSPKKRKSGQEDSELSRLRRDSS-SRGEKKSSRAG 629
Query: 178 GREKGRRRSRSVSPRKQRRSEVK------------SSDVKERGKGSEMRKGKNVGVDYAK 225
R RR+ +PR ++VK S+D+K++ + E++ K ++
Sbjct: 630 SRSPRRRKEVKSTPRDDEENKVKRRTRSRSRSVEDSADIKDKSRDEELKHHKKRSRSRSR 689
Query: 226 LIHGYDNMAPAERVKAKMK-LQLSETAARDSDRGVGWERFEFNKDAPLDD----EEVEGA 280
+AK K Q S + + ++D G E + +D L+ +
Sbjct: 690 EDRSKTRDTSRNSDEAKQKHRQRSRSRSLENDNG-SHENVDVAQDNDLNSRHSKRRSKSL 748
Query: 281 EDDASLVKHIGQSFRFSAVESKREDQIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEV 340
++D + + G+S R ++E+K + DE +T S R K V
Sbjct: 749 DEDYDMKERRGRS-RSRSLETKNRSSRKNKLDE-----------DRNTGSRRRRSRSKSV 796
Query: 341 DNKKDLVSSLLSETVLARPKGSWRDR 366
+ K+ S ++ + R R
Sbjct: 797 EGKRSYNKETRSRDKKSKRRSGRRSR 822
Score = 40.0 bits (92), Expect = 0.002
Identities = 45/147 (30%), Positives = 62/147 (41%), Gaps = 10/147 (6%)
Query: 77 RKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSR 136
R S S + K + K + SR EK N SSRD R KR R RS RD+ RS
Sbjct: 835 RSSPGYSDEKKSRHKRHSRSRSIEKKN---SSRDK-RSKRHERLRSSSPGRDKRRGDRSL 890
Query: 137 SRERNSRYSDRDRDRDRDSGRSRSRSD----SDVDRGRDRRKRERGREKGRRRSRSVSPR 192
S + + + R S + + SD D D D ++ER E S+S +
Sbjct: 891 SPVSSEDHKIKKRHSGSKSVKEKPHSDYEKVDDGDANSDSSQQERNLEGHLLSLDSMSSQ 950
Query: 193 KQRRSEVK--SSDVKERGKGSEMRKGK 217
+S+ SS ERG ++ K K
Sbjct: 951 DVEKSKENPPSSSSVERGDANDDEKFK 977
>At5g16780 putative protein
Length = 820
Score = 63.2 bits (152), Expect = 2e-10
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 33/242 (13%)
Query: 75 SDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDS----DRRKRRSRSRSRERYRDRD 130
S + +++ + + P E R + +D+ S+D DR K R + R++ ++RD
Sbjct: 6 SKSRHEIREERADYEGSPVREHRDGRRKEKDHRSKDKEKDYDREKIRDKDHRRDKEKERD 65
Query: 131 SRRRSRSRERNSRYS-DRDRDRDRDSGRSRSRSDSDVDRGRDRRK-RERGREKGRRRSRS 188
R+RSR + S RD++R++D R R + + D ++ R+R K RE R+ + + +
Sbjct: 66 -RKRSRDEDTEKEISRGRDKEREKDKSRDRVK-EKDKEKERNRHKDRENERDNEKEKDKD 123
Query: 189 VSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQLS 248
+ K+R S+ D E K +E + D L G DN+ A K L L
Sbjct: 124 RARVKERASKKSHEDDDETHKAAERYEHS----DNRGLNEGGDNVDAASSGKEASALDLQ 179
Query: 249 ETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQIQ 308
N+ + +E + AED + + + +S + +E KR + Q
Sbjct: 180 ------------------NRILKMREERKKKAEDASDALSWVARSRK---IEEKRNAEKQ 218
Query: 309 AA 310
A
Sbjct: 219 RA 220
Score = 47.0 bits (110), Expect = 2e-05
Identities = 25/111 (22%), Positives = 47/111 (41%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D DR+ + K+K R ++ SR D+ + + +SR R + +D++ R
Sbjct: 45 DYDREKIRDKDHRRDKEKERDRKRSRDEDTEKEISRGRDKEREKDKSRDRVKEKDKEKER 104
Query: 134 RSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRR 184
N R +++++D+DR + R+ S D + ER R
Sbjct: 105 NRHKDRENERDNEKEKDKDRARVKERASKKSHEDDDETHKAAERYEHSDNR 155
Score = 35.0 bits (79), Expect = 0.065
Identities = 33/152 (21%), Positives = 65/152 (42%), Gaps = 17/152 (11%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSR--------------DSDRRKRRSR 119
D D + ++ ++K ++K + RV EK +R D DR + + R
Sbjct: 71 DEDTEKEISRGRDKEREKDKSRDRVKEKDKEKERNRHKDRENERDNEKEKDKDRARVKER 130
Query: 120 SRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVD-RGRDRRKRERG 178
+ S++ + D D ++ R +S + D S + S +D + R + RE
Sbjct: 131 A-SKKSHEDDDETHKAAERYEHSDNRGLNEGGDNVDAASSGKEASALDLQNRILKMREER 189
Query: 179 REKGRRRSRSVS-PRKQRRSEVKSSDVKERGK 209
++K S ++S + R+ E K + K+R +
Sbjct: 190 KKKAEDASDALSWVARSRKIEEKRNAEKQRAQ 221
>At3g25840 protein kinase like protein
Length = 935
Score = 61.6 bits (148), Expect = 7e-10
Identities = 52/182 (28%), Positives = 82/182 (44%), Gaps = 27/182 (14%)
Query: 57 KASSSSTTTTASTTAPSDSDRKSQLQSIQNKL---KKKPTTESRVSEK----------TN 103
+ S S S+ +PS+S + ++ ++ +++ T+ SR +E ++
Sbjct: 159 RVSKLSYDNGRSSFSPSNSRQSNEGRARSRSKSHDRERETSRSRFAEDEFSDRGRHHDSS 218
Query: 104 RDY------SSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGR 157
RDY S R +R RR R +R R+ R RS+ER+ RDRD + +
Sbjct: 219 RDYHHDRVDSVRTEERYHRRGRYEENDRQYSREVLERDRSKERDMDREGSIRDRDSEGSK 278
Query: 158 SRSRSDSDVDRGRDRRKR-------ERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKG 210
R + DSD R R+R KR ER +EK R RS RK+R + ERG+
Sbjct: 279 RRDK-DSDRRREREREKRREIESDRERRKEKERERSIDRDRRKEREGDYLRDRANERGRS 337
Query: 211 SE 212
+
Sbjct: 338 RD 339
Score = 60.5 bits (145), Expect = 1e-09
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 82 QSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERN 141
+S + + ++ + R SE + R +DSDRR+ R R + RE DR+ RR+ + RER+
Sbjct: 257 RSKERDMDREGSIRDRDSEGSKR--RDKDSDRRREREREKRREIESDRE-RRKEKERERS 313
Query: 142 SRYSDRDRDRDRDSGRSRSRSDSDVDRGRDR---------RKRERGREKGRRRSRSVSPR 192
DRDR ++R+ R R++ +RGR R RKRE+ RE + R +
Sbjct: 314 I---DRDRRKEREGDYLRDRAN---ERGRSRDRTRYNSRERKREKEREGEKDWERGRETQ 367
Query: 193 KQRRSEVKSSDV---KERGKGS-----------EMRKGKNVGVDYAKLIHGYDNMAPAER 238
K R + SSDV + R K S EMRK ++ +K + A ER
Sbjct: 368 KDREKYI-SSDVDYGEMRHKQSRNTRYDAVDDLEMRKPNSLKAHNSKGDKLEETWANDER 426
Query: 239 VKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAED-DASLVKH 289
+ +E D+D G+ W+ E ++ L+ + E + +A L KH
Sbjct: 427 SR-------NEDGQDDNDEGLTWKSPEEEEEELLNRIKEESRKRMEAILEKH 471
Score = 60.5 bits (145), Expect = 1e-09
Identities = 72/281 (25%), Positives = 118/281 (41%), Gaps = 64/281 (22%)
Query: 100 EKTNRDYSSRDSDRRKRRSRSRSRE-RYRDRDS-----------RRRSRSRERNSRY-SD 146
E+ +R YS +R + + R RE RDRDS RRR R RE+ SD
Sbjct: 242 EENDRQYSREVLERDRSKERDMDREGSIRDRDSEGSKRRDKDSDRRREREREKRREIESD 301
Query: 147 RDRDRDRDSGRSRSRSDSDVDRGRDRR---KRERGREKGRRRSRSVSPRKQRRSEVKSSD 203
R+R ++++ RS R DR ++R R+R E+GR R R+ ++R+ E +
Sbjct: 302 RERRKEKERERSIDR-----DRRKEREGDYLRDRANERGRSRDRTRYNSRERKREKEREG 356
Query: 204 VKERGKGSEMRKGK----NVGVDYAKLIHGYDNMAPAERVKAKMKLQLSETAARDSDRGV 259
K+ +G E +K + + VDY ++ H + R A L++ + + +
Sbjct: 357 EKDWERGRETQKDREKYISSDVDYGEMRH---KQSRNTRYDAVDDLEMRKPNSLKAHNSK 413
Query: 260 G------WERFEFNKDAPLDDEEVEG------AEDDASLVKHIGQSFRFSAVESKREDQI 307
G W E +++ D+ EG E++ L+ I + R KR + I
Sbjct: 414 GDKLEETWANDERSRNEDGQDDNDEGLTWKSPEEEEEELLNRIKEESR------KRMEAI 467
Query: 308 QAAHDEAMFGAPAPPPPTSSTDSEPERENE-KEVDNKKDLV 347
H +PE++NE DN KD+V
Sbjct: 468 LEKHKR-----------------KPEQQNELLTQDNGKDIV 491
Score = 29.6 bits (65), Expect = 2.7
Identities = 55/256 (21%), Positives = 90/256 (34%), Gaps = 48/256 (18%)
Query: 124 ERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGR 183
E+ R + + + R S D+ D++ G S S D GR R+
Sbjct: 124 EKGRQGEEKSSNGVLTRESEREDKRWDKEA-GGPSERVSKLSYDNGRSSFSPSNSRQSNE 182
Query: 184 RRSRSVS-----PRKQRRSEVKSSDVKERGKGSE-MRKGKNVGVDYAKLIHGYDNMAPAE 237
R+RS S R+ RS + +RG+ + R + VD + Y E
Sbjct: 183 GRARSRSKSHDRERETSRSRFAEDEFSDRGRHHDSSRDYHHDRVDSVRTEERYHRRGRYE 242
Query: 238 ---RVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAE--DDASLVKHIGQ 292
R ++ L+ + RD DR + + D + EG++ D S + +
Sbjct: 243 ENDRQYSREVLERDRSKERDMDR-----------EGSIRDRDSEGSKRRDKDSDRRRERE 291
Query: 293 SFRFSAVESKREDQIQAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVDNKKDLVSSLLS 352
+ +ES RE + E ERE + D +K+ L
Sbjct: 292 REKRREIESDRERR-----------------------KEKERERSIDRDRRKEREGDYLR 328
Query: 353 ETVLARPKGSWRDRVR 368
+ A +G RDR R
Sbjct: 329 DR--ANERGRSRDRTR 342
>At3g26560 ATP-dependent RNA helicase, putative
Length = 1168
Score = 61.2 bits (147), Expect = 9e-10
Identities = 46/133 (34%), Positives = 60/133 (44%), Gaps = 12/133 (9%)
Query: 61 SSTTTTASTTAPSDSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRS 120
S TT P K + + K K +++ K R+++ R+R
Sbjct: 68 SLLTTIHGIYPPKPKSEKKKEEGDDQKFKGLAIKDTKDKVKELEKEIEREAEERRREE-- 125
Query: 121 RSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSD-VDRGRDRRKRERGR 179
+R RDRD R R R+R+ R DRD RDR R R+R D + DR DRR RERGR
Sbjct: 126 ---DRNRDRDRRESGRDRDRD-RNRDRDDRRDRHRDRERNRGDEEGEDRRSDRRHRERGR 181
Query: 180 EKG-----RRRSR 187
G RRR R
Sbjct: 182 GDGGEGEDRRRDR 194
Score = 58.2 bits (139), Expect = 7e-09
Identities = 44/150 (29%), Positives = 71/150 (47%), Gaps = 16/150 (10%)
Query: 78 KSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRS-- 135
+S L +I KP +E + E ++ + K + + +E R+ + RRR
Sbjct: 67 RSLLTTIHGIYPPKPKSEKKKEEGDDQKFKGLAIKDTKDKVKELEKEIEREAEERRREED 126
Query: 136 RSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQR 195
R+R+R+ R S RDRDRDR+ R R DR RDR +R RG E+G R R++
Sbjct: 127 RNRDRDRRESGRDRDRDRNRDRDDRR-----DRHRDR-ERNRGDEEGEDRRSDRRHRERG 180
Query: 196 RSEVKSSDVKERGKGSEMRKGKNVGVDYAK 225
R + G+G + R+ + +Y +
Sbjct: 181 RG--------DGGEGEDRRRDRRAKDEYVE 202
Score = 57.4 bits (137), Expect = 1e-08
Identities = 37/107 (34%), Positives = 55/107 (50%), Gaps = 10/107 (9%)
Query: 76 DRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR-R 134
D K +++ ++ +++++ E R E NRD R+S R R R+R RDRD RR R
Sbjct: 102 DTKDKVKELEKEIERE-AEERRREEDRNRDRDRRES------GRDRDRDRNRDRDDRRDR 154
Query: 135 SRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREK 181
R RERN D + + R R R R D G DRR+ R +++
Sbjct: 155 HRDRERNR--GDEEGEDRRSDRRHRERGRGDGGEGEDRRRDRRAKDE 199
>At3g09620 putative RNA helicase
Length = 989
Score = 60.5 bits (145), Expect = 1e-09
Identities = 66/274 (24%), Positives = 117/274 (42%), Gaps = 37/274 (13%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKT-NRDYSSRDSDRRKRRSRSRSRERYRDRDSR 132
++DRK + +S + + ++ TTE R K + + R RR R+S E Y +RDS+
Sbjct: 10 ENDRKDRDRS-KKENGRRDTTEMRSRVKRCDSEEEERIRIRRDRKSSDFEEEEY-ERDSK 67
Query: 133 RRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSV--- 189
RR + R R +RDRDR + R R R + + ++GR ++K+ER RE S V
Sbjct: 68 RRGEDKGRGRR--ERDRDRGKYLKRDRERREREKEKGRKKQKKERSREDCNEESDDVKCG 125
Query: 190 -SPRKQRRSEVKSSDVKERGKGSEMR-KGKNVGVDYAKLIHGYDNMAPAERVKAKMKLQL 247
++ RS DV+++ + ++ + K + + K RV+ +L+
Sbjct: 126 LKRKRTERSRHGDDDVEKKTRDEQVEDEQKQLAEEVEK---------RRRRVQEWQELKR 176
Query: 248 SETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASLVKHIGQSFRFSAVESKREDQI 307
A+ +G E K LD E + + D S ++ R+ ++
Sbjct: 177 QNEEAQIESKGP-----ETGKAWTLDGESDDEVKSD-------------SEMDVDRDTKL 218
Query: 308 QAAHDEAMFGAPAPPPPTSSTDSEPERENEKEVD 341
+ D M + T S + +E E+D
Sbjct: 219 ENGGDAKMVASENETAVTVSENGGDRAADEDEID 252
Score = 40.4 bits (93), Expect = 0.002
Identities = 53/247 (21%), Positives = 102/247 (40%), Gaps = 47/247 (19%)
Query: 108 SRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSDSDVD 167
SR + RK R RS+ RD + RSR + +S +R R R R R SD + +
Sbjct: 7 SRKENDRKDRDRSKKENGRRDT-TEMRSRVKRCDSEEEERIRIR-----RDRKSSDFEEE 60
Query: 168 R-GRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKL 226
RD ++R + +GRR + +R + KE+G+ + ++
Sbjct: 61 EYERDSKRRGEDKGRGRRERDRDRGKYLKRDRERREREKEKGRKKQKKERSR-------- 112
Query: 227 IHGYDNMAPAERVKAKMKLQLSETAARDSDRGVGWERFEFNKDAPLDDEEVEGAEDDASL 286
D ++ VK +K + +E + D + + +D ++DE+ + AE+
Sbjct: 113 ---EDCNEESDDVKCGLKRKRTERSRHGDD-----DVEKKTRDEQVEDEQKQLAEE---- 160
Query: 287 VKHIGQSFRFSAVESKRE-----DQIQAAHDEAMFGAPAPPPPTSST---DSEPERENEK 338
VE +R +++ ++EA + P + T +S+ E +++
Sbjct: 161 ------------VEKRRRRVQEWQELKRQNEEAQIESKGPETGKAWTLDGESDDEVKSDS 208
Query: 339 EVDNKKD 345
E+D +D
Sbjct: 209 EMDVDRD 215
>At5g09880 splicing factor-like protein
Length = 527
Score = 60.1 bits (144), Expect = 2e-09
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 16/132 (12%)
Query: 89 KKKPTTESRVSEKTNRDYSSRDSDRRK-------RRSRSRSRERYRDRDS-----RRRSR 136
KKK E +E++ R Y R+ R+ R SRS++ D + R R R
Sbjct: 21 KKK---EESGNERSERSYRKREGGERQGEEGGEEERVSSRSKKSRGDGEENGGGKRDRER 77
Query: 137 SRERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRR 196
R R+SR DR+RD+ R+ R + + RDR R++ R++ RR S + RR
Sbjct: 78 ERHRSSRDKDRERDKVREGSRDKESDRERSSKERDRSDRDKPRDRERREREKRSSSRSRR 137
Query: 197 SEVKSSDVKERG 208
E K +V ERG
Sbjct: 138 EE-KEPEVVERG 148
Score = 50.4 bits (119), Expect = 2e-06
Identities = 34/84 (40%), Positives = 44/84 (51%), Gaps = 9/84 (10%)
Query: 104 RDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSRSRSD 163
R SSRD DR + + R SR++ DR+ R S+ R+R SDRD+ RDR+ RS
Sbjct: 79 RHRSSRDKDRERDKVREGSRDKESDRE--RSSKERDR----SDRDKPRDRERREREKRSS 132
Query: 164 SDVDRGRDRRKRERGREKGRRRSR 187
S R R K E+G RR R
Sbjct: 133 S---RSRREEKEPEVVERGSRRHR 153
Score = 49.7 bits (117), Expect = 3e-06
Identities = 36/117 (30%), Positives = 55/117 (46%), Gaps = 11/117 (9%)
Query: 89 KKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDS-RRRSRSRERNSRYSDR 147
+++ ++ S+ S + DR + R RS SR++ R+RD R SR +E + S +
Sbjct: 51 EERVSSRSKKSRGDGEENGGGKRDRERERHRS-SRDKDRERDKVREGSRDKESDRERSSK 109
Query: 148 DRDR-DRDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPRKQRRSEVKSSD 203
+RDR DRD R R R R+R KR R + + V R RR K +
Sbjct: 110 ERDRSDRDKPRDRER--------REREKRSSSRSRREEKEPEVVERGSRRHRDKKDE 158
Score = 45.8 bits (107), Expect = 4e-05
Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 3/124 (2%)
Query: 93 TTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRRRSRSRERNSRYSDRDRDRD 152
T E ++ S + R R R + + R SR + SR +
Sbjct: 12 TVEEGAGSNKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKKSRGDGEENGGG 71
Query: 153 -RDSGRSRSRSDSDVDRGRDRRKRERGREKGRRRSRSVSPR-KQRRSEVKSSDVKERGKG 210
RD R R RS D DR RD + RE R+K R RS R + R + + + +ER K
Sbjct: 72 KRDRERERHRSSRDKDRERD-KVREGSRDKESDRERSSKERDRSDRDKPRDRERREREKR 130
Query: 211 SEMR 214
S R
Sbjct: 131 SSSR 134
Score = 39.7 bits (91), Expect = 0.003
Identities = 30/102 (29%), Positives = 50/102 (48%), Gaps = 9/102 (8%)
Query: 74 DSDRKSQLQSIQNKLKKKPTTESRVSEKTNRDYSSRDSDRRKRRSRSRSRERYRDRDSRR 133
D +R+ S ++ E ++++R+ SS++ D R R + R RER R+R+ R
Sbjct: 74 DRERERHRSSRDKDRERDKVREGSRDKESDRERSSKERD-RSDRDKPRDRER-REREKRS 131
Query: 134 RSRSR--ERNSRYSDRDRDRDRDSGRSRSRSDSDVDRGRDRR 173
SRSR E+ +R R RD + + + D RD+R
Sbjct: 132 SSRSRREEKEPEVVERGSRRHRD-----KKDEPEADPERDQR 168
Score = 34.3 bits (77), Expect = 0.11
Identities = 37/162 (22%), Positives = 64/162 (38%), Gaps = 22/162 (13%)
Query: 120 SRSRERYRDRDSRRRSRSRERNSRYSDRDRDRDRDSGRSR-SRSDSDVDRGRDRRKRERG 178
++ +E + S R R RE R + + +R S RS+ SR D + + G +R
Sbjct: 20 NKKKEESGNERSERSYRKREGGERQGEEGGEEERVSSRSKKSRGDGEENGGG-----KRD 74
Query: 179 REKGRRRSRSVSPRKQRRSEVKSSDVKERGKGSEMRKGKNVGVDYAKLIHGYDNMAPAER 238
RE+ R RS R++ + S D + + S + ++ D P +R
Sbjct: 75 RERERHRSSRDKDRERDKVREGSRDKESDRERSSKERDRS------------DRDKPRDR 122
Query: 239 VKAKMKLQLSETAARDSDRGV----GWERFEFNKDAPLDDEE 276
+ + + + S + R+ G R KD P D E
Sbjct: 123 ERREREKRSSSRSRREEKEPEVVERGSRRHRDKKDEPEADPE 164
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.307 0.123 0.329
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,219,759
Number of Sequences: 26719
Number of extensions: 383328
Number of successful extensions: 7030
Number of sequences better than 10.0: 482
Number of HSP's better than 10.0 without gapping: 206
Number of HSP's successfully gapped in prelim test: 286
Number of HSP's that attempted gapping in prelim test: 3116
Number of HSP's gapped (non-prelim): 1479
length of query: 369
length of database: 11,318,596
effective HSP length: 101
effective length of query: 268
effective length of database: 8,619,977
effective search space: 2310153836
effective search space used: 2310153836
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 61 (28.1 bits)
Medicago: description of AC146914.1