BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146864.1 + phase: 0 
         (194 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g05270 unknown protein                                              87  4e-18
At2g32340 hypothetical protein                                         61  3e-10
At5g52030 unknown protein                                              39  0.002
At3g53440 unknown protein                                              33  0.095
At3g03570 unknown protein                                              31  0.36
At5g52060 putative protein                                             30  0.80
At5g49420 MADS-box protein-like                                        27  5.2
At3g06800 hypothetical protein                                         27  6.8
At4g30090 putative protein                                             27  8.9

>At1g05270 unknown protein
          Length = 371

 Score = 87.4 bits (215), Expect = 4e-18
 Identities = 40/78 (51%), Positives = 57/78 (72%)

Query: 48  RLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKPEIVFLEL 107
           ++ELP+EL K+V+ L+C+S   GG CDVYLVGT H +K+S  +VE I+  LKPE+VF+EL
Sbjct: 84  KVELPEELAKSVVILTCESTADGGSCDVYLVGTAHVSKQSCLEVEAIISILKPEVVFVEL 143

Query: 108 CSDRQEVLLHDNMEVSTI 125
           CS R  VL    +++ T+
Sbjct: 144 CSSRLSVLKPQTLKIPTM 161


>At2g32340 hypothetical protein
          Length = 302

 Score = 61.2 bits (147), Expect = 3e-10
 Identities = 29/61 (47%), Positives = 43/61 (69%), Gaps = 3/61 (4%)

Query: 44  ERQRRLELPKELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNK---ESSKQVEEIVKFLKP 100
           E   +LELP+E  K+V+ L+C+S  +GG CDVYLVGT H ++   ES ++VE ++  LKP
Sbjct: 66  ETTEKLELPEEFAKSVMVLTCESTAEGGSCDVYLVGTAHVSQVILESCREVEAVISALKP 125

Query: 101 E 101
           +
Sbjct: 126 Q 126


>At5g52030 unknown protein
          Length = 391

 Score = 38.5 bits (88), Expect = 0.002
 Identities = 17/41 (41%), Positives = 28/41 (67%)

Query: 75  VYLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEVL 115
           ++LVGT H + ES+  VE +V+ +KP+ V +ELC  R  ++
Sbjct: 94  IWLVGTSHISPESASIVERVVRTVKPDNVAVELCRSRAGIM 134


>At3g53440 unknown protein
          Length = 512

 Score = 33.1 bits (74), Expect = 0.095
 Identities = 19/65 (29%), Positives = 40/65 (61%), Gaps = 2/65 (3%)

Query: 15  RKVIQTTFTTLPCFSTTSAAFCRDQSPE-KERQRRLELPKELTKNVIQLSCDSMEKGGVC 73
           R+  +T  +T+P FS +++   +  SP+ K RQRR  L K++ +++++   + M++G   
Sbjct: 315 RRATKTILSTIPQFSLSASKLLKPNSPKTKIRQRRNNLSKKVVRHLLEKQ-NHMDQGLGF 373

Query: 74  DVYLV 78
           D++ V
Sbjct: 374 DLFSV 378


>At3g03570 unknown protein
          Length = 607

 Score = 31.2 bits (69), Expect = 0.36
 Identities = 20/78 (25%), Positives = 35/78 (44%)

Query: 85  KESSKQVEEIVKFLKPEIVFLELCSDRQEVLLHDNMEVSTILVHISDNAIMTIRCSFSCI 144
           KE     +EIV+FLK +  F+ +   R  ++L  N++  T     S      I  S+ C 
Sbjct: 175 KEWKVVAQEIVRFLKSDTAFMNIRPLRYSLVLDPNLDAGTPRASRSLRLTDAILSSYYCN 234

Query: 145 DNQHYHSIINFFNFSQAL 162
           + ++    ++ F   Q L
Sbjct: 235 EVKYSELTLDSFRMLQCL 252


>At5g52060 putative protein
          Length = 326

 Score = 30.0 bits (66), Expect = 0.80
 Identities = 21/109 (19%), Positives = 49/109 (44%), Gaps = 5/109 (4%)

Query: 39  QSPEKERQRRLELPK-----ELTKNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEE 93
           + P  + +R LE+ K     + +K +  +S +    GG    + + T  G K + K +  
Sbjct: 120 EDPLSQEKRFLEMRKIAKTEKASKAISDISLEVDRLGGRVSAFEMVTKKGGKIAEKDLVT 179

Query: 94  IVKFLKPEIVFLELCSDRQEVLLHDNMEVSTILVHISDNAIMTIRCSFS 142
           +++ L  E++ L+      +V L   M+V  +  ++     + ++ S +
Sbjct: 180 VIELLMNELIKLDAIVAEGDVKLQRKMQVKRVQNYVETLDALKVKNSMA 228


>At5g49420 MADS-box protein-like
          Length = 368

 Score = 27.3 bits (59), Expect = 5.2
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 8   CCLSTRLRKVIQTTFTTLPCFSTTSAAFC-RDQSPE 42
           CC+   L ++ Q    TL   S+TSA  C  D SPE
Sbjct: 189 CCIPENLNEITQEPNQTLNIQSSTSAICCVPDNSPE 224


>At3g06800 hypothetical protein
          Length = 314

 Score = 26.9 bits (58), Expect = 6.8
 Identities = 20/73 (27%), Positives = 33/73 (44%), Gaps = 2/73 (2%)

Query: 76  YLVGTFHGNKESSKQVEEIVKFLKPEIVFLELCSDRQEVLLHDNMEVSTILVHIS-DNAI 134
           YL  T  G  E + ++ E+V +L+  I   E  +     L+H +  +  ++ H S D  I
Sbjct: 189 YLASTSEGKPERNPKMFELVDWLRKNIP-AEDSTGATSGLVHGDFRIDNLVFHPSEDRVI 247

Query: 135 MTIRCSFSCIDNQ 147
             I    S + NQ
Sbjct: 248 GIIDWELSTLGNQ 260


>At4g30090 putative protein
          Length = 312

 Score = 26.6 bits (57), Expect = 8.9
 Identities = 20/62 (32%), Positives = 33/62 (52%), Gaps = 2/62 (3%)

Query: 42  EKERQRRLELPKELT-KNVIQLSCDSMEKGGVCDVYLVGTFHGNKESSKQVEEIVKFLKP 100
           E +R+RRLE+  EL  K V QLS   +E      +  +G      + S ++E++ K+ +P
Sbjct: 124 ETQRKRRLEVEAELADKKVAQLS-SKLENIDGWFLSKLGLNPTESQVSMKIEQVQKWSEP 182

Query: 101 EI 102
            I
Sbjct: 183 HI 184


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.324    0.135    0.399 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,109,576
Number of Sequences: 26719
Number of extensions: 157808
Number of successful extensions: 554
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 548
Number of HSP's gapped (non-prelim): 9
length of query: 194
length of database: 11,318,596
effective HSP length: 94
effective length of query: 100
effective length of database: 8,807,010
effective search space: 880701000
effective search space used: 880701000
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 57 (26.6 bits)