BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146863.3 + phase: 0
(287 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g27170 disease resistance protein, putative 171 3e-43
At1g27180 disease resistance protein, putative 163 1e-40
At5g36930 disease resistance like protein 148 4e-36
At5g17680 disease resistance protein RPP1-WsB - like protein 132 2e-31
At1g72840 hypothetical protein 129 2e-30
At5g46450 disease resistance protein-like 128 3e-30
At5g17970 disease resistance protein-like 128 3e-30
At4g16920 disease resistance RPP5 like protein 127 7e-30
At5g18370 disease resistance protein -like 126 2e-29
At5g48770 disease resistance protein 125 3e-29
At1g72890 hypothetical protein 124 6e-29
At1g17600 disease resistance protein, putative 122 2e-28
At4g11170 RPP1-WsA-like disease resistance protein 122 2e-28
At1g72910 unknown protein 122 2e-28
At1g72930 putative protein 122 3e-28
At4g16950 disease resistance RPP5 like protein 121 4e-28
At1g72950 hypothetical protein 121 5e-28
At5g44510 disease resistance protein-like 120 6e-28
At4g16860 disease resistance RPP5 like protein 120 6e-28
At3g04220 putative disease resistance protein 120 8e-28
>At1g27170 disease resistance protein, putative
Length = 1560
Score = 171 bits (434), Expect = 3e-43
Identities = 99/268 (36%), Positives = 142/268 (52%), Gaps = 36/268 (13%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
A+EDS +VV S N+A S +CL ELA + G+ +LPIFY+V+P +RKQ+G Y
Sbjct: 65 AMEDSVALVVVLSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEPCMLRKQNGPYE 124
Query: 77 ESLAKLEE--IAPQVQRWREALQLVGNISGWDLCHKPQHAELENIIEHINILGCKFSSRT 134
+ + ++QRWR AL ++GNI G+
Sbjct: 125 MDFEEHSKRFSEEKIQRWRRALNIIGNIPGF----------------------------- 155
Query: 135 KDLVEINYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIE 194
+ + YDVF+SFRG DTR NF DHL+ AL+ + + FRD+ +++G+ I+ L +E
Sbjct: 156 --VYRLKYDVFLSFRGADTRDNFGDHLYKALKDK-VRVFRDNEGMERGDEISSSLKAGME 212
Query: 195 ASQLYIVVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEAL 254
S ++V S+NY+ S WCL EL + + ILPIFY VDPS V+KQS +
Sbjct: 213 DSAASVIVISRNYSGSRWCLDELAMLCKMKSSLDRRILPIFYHVDPSHVRKQSDHIKKDF 272
Query: 255 SKH--GFKHGLNMVHRWRETLTQVGNIS 280
+H F V WRE LT VGN++
Sbjct: 273 EEHQVRFSEEKEKVQEWREALTLVGNLA 300
Score = 96.3 bits (238), Expect = 2e-20
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 1/140 (0%)
Query: 140 INYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLY 199
+ +DVF+SF+ D R FT+ L+ L + + + +D + + L A+E S
Sbjct: 14 LEWDVFLSFQR-DARHKFTERLYEVLVKEQVRVWNNDDVERGNHELGASLVEAMEDSVAL 72
Query: 200 IVVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGF 259
+VV S NYA S WCL EL + G+ +LPIFY+V+P ++KQ+G Y +H
Sbjct: 73 VVVLSPNYAKSHWCLEELAMLCDLKSSLGRLVLPIFYEVEPCMLRKQNGPYEMDFEEHSK 132
Query: 260 KHGLNMVHRWRETLTQVGNI 279
+ + RWR L +GNI
Sbjct: 133 RFSEEKIQRWRRALNIIGNI 152
Score = 79.0 bits (193), Expect = 3e-15
Identities = 54/147 (36%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 7 GDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPS 66
GD + +EDS ++V S+N++ S +CL ELA + + ILPIFY VDPS
Sbjct: 200 GDEISSSLKAGMEDSAASVIVISRNYSGSRWCLDELAMLCKMKSSLDRRILPIFYHVDPS 259
Query: 67 EVRKQSG----GYGESLAKLEEIAPQVQRWREALQLVGNISGW------------DLCHK 110
VRKQS + E + E +VQ WREAL LVGN++G+ +L K
Sbjct: 260 HVRKQSDHIKKDFEEHQVRFSEEKEKVQEWREALTLVGNLAGYVCDKDSKDDDMIELVVK 319
Query: 111 PQHAELENIIEHINILGCKFSSRTKDL 137
AEL N E + S KDL
Sbjct: 320 RVLAELSNTPEKVGEFIVGLESPLKDL 346
>At1g27180 disease resistance protein, putative
Length = 1556
Score = 163 bits (412), Expect = 1e-40
Identities = 99/267 (37%), Positives = 152/267 (56%), Gaps = 25/267 (9%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCIL-PIFYDVDPSEVRKQSGGY 75
AIEDS F+VV S N+A+S L ELA + C + KC++ PIFY V+P EV++Q+G +
Sbjct: 69 AIEDSVAFVVVLSPNYANSHLRLEELAKL--CDL---KCLMVPIFYKVEPREVKEQNGPF 123
Query: 76 GESLAKLEEI--APQVQRWREALQLVGNISGWDLCHKPQHAELENIIEHINILGCKFSSR 133
+ + + ++QRW+ A+ VGNISG+ +C E+E + +R
Sbjct: 124 EKDFEEHSKRFGEEKIQRWKGAMTTVGNISGF-ICGYEIQLEMETGV---------VPNR 173
Query: 134 TKDLVEINYDVFVSFRGPDTRFNFTDHLFAAL-QRRGINAFRDDTKLKKGEFIAPGLFRA 192
K Y VF+SFRG DTR NF + L+ AL +++ + FRD+ ++KG+ I P LF A
Sbjct: 174 LK------YSVFLSFRGFDTRTNFCERLYIALNEKQNVRVFRDNEGMEKGDKIDPSLFEA 227
Query: 193 IEASQLYIVVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGE 252
IE S +++ S NYA+S+WCL EL + + ++PIFY V+P +V+KQSG + +
Sbjct: 228 IEDSAASVIILSTNYANSSWCLDELALLCDLRSSLKRPMIPIFYGVNPEDVRKQSGEFRK 287
Query: 253 ALSKHGFKHGLNMVHRWRETLTQVGNI 279
+ + RW+ + VGNI
Sbjct: 288 DFEEKAKSFDEETIQRWKRAMNLVGNI 314
Score = 88.6 bits (218), Expect = 4e-18
Identities = 53/144 (36%), Positives = 81/144 (55%), Gaps = 8/144 (5%)
Query: 140 INYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEF---IAPGLFRAIEAS 196
+ +D F+SF+ DT NFTD L+ AL + + + DD + + + P L AIE S
Sbjct: 15 VKWDAFLSFQR-DTSHNFTDRLYEALVKEELRVWNDDLERVDHDHDHELRPSLVEAIEDS 73
Query: 197 QLYIVVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSK 256
++VV S NYA+S L EL + C K ++PIFY V+P EV++Q+G + + +
Sbjct: 74 VAFVVVLSPNYANSHLRLEELAKL--CDLKC--LMVPIFYKVEPREVKEQNGPFEKDFEE 129
Query: 257 HGFKHGLNMVHRWRETLTQVGNIS 280
H + G + RW+ +T VGNIS
Sbjct: 130 HSKRFGEEKIQRWKGAMTTVGNIS 153
Score = 78.6 bits (192), Expect = 4e-15
Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 7/152 (4%)
Query: 7 GDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPS 66
GD + F AIEDS +++ S N+A+S +CL ELA + + ++PIFY V+P
Sbjct: 217 GDKIDPSLFEAIEDSAASVIILSTNYANSSWCLDELALLCDLRSSLKRPMIPIFYGVNPE 276
Query: 67 EVRKQSGGYGESLAKLEEIAPQ--VQRWREALQLVGNISGWDLCHKP-----QHAELENI 119
+VRKQSG + + + + + +QRW+ A+ LVGNI G+ K + E +
Sbjct: 277 DVRKQSGEFRKDFEEKAKSFDEETIQRWKRAMNLVGNIPGYVCTAKTVGDDNEGINREKV 336
Query: 120 IEHINILGCKFSSRTKDLVEINYDVFVSFRGP 151
+ I+++ K + ++ EI D V P
Sbjct: 337 DDMIDLVVKKVVAAVRNRPEIVADYTVGLESP 368
>At5g36930 disease resistance like protein
Length = 1164
Score = 148 bits (373), Expect = 4e-36
Identities = 73/140 (52%), Positives = 96/140 (68%), Gaps = 1/140 (0%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVFVSFRG D R NF HL+ +L+R GI+ F DD +L++GE+I+P L AIE S++ IV
Sbjct: 14 YDVFVSFRGADVRKNFLSHLYDSLRRCGISTFMDDVELQRGEYISPELLNAIETSKILIV 73
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKH-ILPIFYDVDPSEVQKQSGGYGEALSKHGFK 260
V +K+YASS WCL EL +I+ K H + PIF VDPS+++ Q G Y ++ SKH
Sbjct: 74 VLTKDYASSAWCLDELVHIMKSHKNNPSHMVFPIFLYVDPSDIRWQQGSYAKSFSKHKNS 133
Query: 261 HGLNMVHRWRETLTQVGNIS 280
H LN + WRE LT+V NIS
Sbjct: 134 HPLNKLKDWREALTKVANIS 153
Score = 79.3 bits (194), Expect = 2e-15
Identities = 47/128 (36%), Positives = 74/128 (57%), Gaps = 5/128 (3%)
Query: 1 MDDYH--PGDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLY-GKCIL 57
MDD G+ + + +AIE S++ IVV +K++A S +CL EL +I+ +
Sbjct: 46 MDDVELQRGEYISPELLNAIETSKILIVVLTKDYASSAWCLDELVHIMKSHKNNPSHMVF 105
Query: 58 PIFYDVDPSEVRKQSGGYGESLAKLEEIAP--QVQRWREALQLVGNISGWDLCHKPQHAE 115
PIF VDPS++R Q G Y +S +K + P +++ WREAL V NISGWD+ ++ +
Sbjct: 106 PIFLYVDPSDIRWQQGSYAKSFSKHKNSHPLNKLKDWREALTKVANISGWDIKNRNEAEC 165
Query: 116 LENIIEHI 123
+ +I I
Sbjct: 166 IADITREI 173
>At5g17680 disease resistance protein RPP1-WsB - like protein
Length = 1294
Score = 132 bits (333), Expect = 2e-31
Identities = 69/143 (48%), Positives = 92/143 (64%), Gaps = 6/143 (4%)
Query: 143 DVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIVV 202
DVFVSFRG D R F HLF R GI AFRDD L++G+ I+P L AI+ S+ IVV
Sbjct: 19 DVFVSFRGEDVRKTFVSHLFCEFDRMGIKAFRDDLDLQRGKSISPELIDAIKGSRFAIVV 78
Query: 203 FSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKHG 262
S+NYA+S+WCL EL I+ C+K I+PIFY+VDPS+V++Q G +GE + H K
Sbjct: 79 VSRNYAASSWCLDELLKIMECNK---DTIVPIFYEVDPSDVRRQRGSFGEDVESHSDK-- 133
Query: 263 LNMVHRWRETLTQVGNISSSNPR 285
V +W+E L ++ IS + R
Sbjct: 134 -EKVGKWKEALKKLAAISGEDSR 155
Score = 74.3 bits (181), Expect = 7e-14
Identities = 44/122 (36%), Positives = 71/122 (58%), Gaps = 4/122 (3%)
Query: 3 DYHPGDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYD 62
D G + + AI+ S+ IVV S+N+A S +CL EL I+ C+ I+PIFY+
Sbjct: 54 DLQRGKSISPELIDAIKGSRFAIVVVSRNYAASSWCLDELLKIMECNK---DTIVPIFYE 110
Query: 63 VDPSEVRKQSGGYGESLAKLEEIAPQVQRWREALQLVGNISGWDLCHKPQHAELENIIEH 122
VDPS+VR+Q G +GE + + +V +W+EAL+ + ISG D + ++ I++
Sbjct: 111 VDPSDVRRQRGSFGEDVESHSD-KEKVGKWKEALKKLAAISGEDSRNWDDSKLIKKIVKD 169
Query: 123 IN 124
I+
Sbjct: 170 IS 171
>At1g72840 hypothetical protein
Length = 1183
Score = 129 bits (324), Expect = 2e-30
Identities = 64/146 (43%), Positives = 90/146 (60%), Gaps = 1/146 (0%)
Query: 141 NYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYI 200
+YDVF+SFRG DTR HL+ AL+ G+ F+DD KL+ G+ IA GL +AI+ S +
Sbjct: 14 HYDVFLSFRGVDTRQTIVSHLYVALRNNGVLTFKDDRKLEIGDTIADGLVKAIQTSWFAV 73
Query: 201 VVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFK 260
V+ S+NYA+STWCL EL I+ + +LPIFY V PS+V+ Q G + A ++
Sbjct: 74 VILSENYATSTWCLEELRLIMQLHSEEQIKVLPIFYGVKPSDVRYQEGSFATAFQRYEAD 133
Query: 261 HGL-NMVHRWRETLTQVGNISSSNPR 285
+ V +WR LTQV N+S + R
Sbjct: 134 PEMEEKVSKWRRALTQVANLSGKHSR 159
Score = 67.4 bits (163), Expect = 8e-12
Identities = 38/101 (37%), Positives = 55/101 (53%), Gaps = 3/101 (2%)
Query: 7 GDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPS 66
GD + AI+ S +V+ S+N+A S +CL EL I+ +LPIFY V PS
Sbjct: 55 GDTIADGLVKAIQTSWFAVVILSENYATSTWCLEELRLIMQLHSEEQIKVLPIFYGVKPS 114
Query: 67 EVRKQSGGYGESLAKLE---EIAPQVQRWREALQLVGNISG 104
+VR Q G + + + E E+ +V +WR AL V N+SG
Sbjct: 115 DVRYQEGSFATAFQRYEADPEMEEKVSKWRRALTQVANLSG 155
>At5g46450 disease resistance protein-like
Length = 1123
Score = 128 bits (322), Expect = 3e-30
Identities = 61/139 (43%), Positives = 92/139 (65%), Gaps = 1/139 (0%)
Query: 141 NYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYI 200
+YDVF SF G D R F H L+R+ I F+D+ ++++ + IAP L AI+ S++ +
Sbjct: 12 SYDVFPSFSGEDVRKTFLSHFLRELERKSIITFKDN-EMERSQSIAPELVEAIKDSRIAV 70
Query: 201 VVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFK 260
+VFSKNYASS+WCL EL I+ C+K G+ ++P+FY +DPS ++KQSG +GEA K
Sbjct: 71 IVFSKNYASSSWCLNELLEIMRCNKYLGQQVIPVFYYLDPSHLRKQSGEFGEAFKKTCQN 130
Query: 261 HGLNMVHRWRETLTQVGNI 279
+ ++W++ LT V NI
Sbjct: 131 QTEEVKNQWKQALTDVSNI 149
Score = 83.6 bits (205), Expect = 1e-16
Identities = 47/113 (41%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI+DS++ ++VFSKN+A S +CL EL I+ C+ G+ ++P+FY +DPS +RKQSG +G
Sbjct: 62 AIKDSRIAVIVFSKNYASSSWCLNELLEIMRCNKYLGQQVIPVFYYLDPSHLRKQSGEFG 121
Query: 77 ESLAK-----LEEIAPQVQRWREALQLVGNISGWDLCHKPQHAE-LENIIEHI 123
E+ K EE+ Q W++AL V NI G+ + A +E I HI
Sbjct: 122 EAFKKTCQNQTEEVKNQ---WKQALTDVSNILGYHSKNCNSEATMIEEISSHI 171
>At5g17970 disease resistance protein-like
Length = 780
Score = 128 bits (322), Expect = 3e-30
Identities = 69/140 (49%), Positives = 88/140 (62%), Gaps = 1/140 (0%)
Query: 141 NYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYI 200
+Y VF SF G D R NF HL LQ GI+AF+D +K+ I P L +AI S+++I
Sbjct: 15 SYHVFPSFCGEDVRRNFLSHLHKELQHNGIDAFKDGG-IKRSRSIWPELKQAIWESKIFI 73
Query: 201 VVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFK 260
VV SKNYA S WCL EL I+ C + GK ++PIFYDVDPS V+KQ+G +G+A K
Sbjct: 74 VVLSKNYAGSCWCLDELVEIMECREVVGKTLVPIFYDVDPSSVRKQTGDFGKAFDKICDV 133
Query: 261 HGLNMVHRWRETLTQVGNIS 280
RWR+ LT VGNI+
Sbjct: 134 RTEEERQRWRQALTNVGNIA 153
Score = 100 bits (248), Expect = 1e-21
Identities = 50/97 (51%), Positives = 69/97 (70%), Gaps = 7/97 (7%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI +S++FIVV SKN+A SC+CL EL I+ C + GK ++PIFYDVDPS VRKQ+G +G
Sbjct: 65 AIWESKIFIVVLSKNYAGSCWCLDELVEIMECREVVGKTLVPIFYDVDPSSVRKQTGDFG 124
Query: 77 ESLAKLEEIAPQV--QRWREALQLVGNISG-----WD 106
++ K+ ++ + QRWR+AL VGNI+G WD
Sbjct: 125 KAFDKICDVRTEEERQRWRQALTNVGNIAGECSSKWD 161
>At4g16920 disease resistance RPP5 like protein
Length = 1304
Score = 127 bits (319), Expect = 7e-30
Identities = 64/143 (44%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Query: 143 DVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIVV 202
D+F SF G D R NF HL L RR IN F D +++ IA L AI +++ IV+
Sbjct: 10 DIFPSFSGEDVRKNFLSHLLKQLNRRSINTFMDHV-IERSCIIADALISAIREARISIVI 68
Query: 203 FSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKHG 262
FSKNYA+STWCL EL I +CSK +G+ ++P+FYDVDPS V+KQ G +G+ K
Sbjct: 69 FSKNYAASTWCLNELVEIDNCSKYFGQKVIPVFYDVDPSHVRKQIGEFGKVFKKTCEDKP 128
Query: 263 LNMVHRWRETLTQVGNISSSNPR 285
+ RW + LT + NI+ + R
Sbjct: 129 ADQKQRWVKALTDISNIAGEDLR 151
Score = 92.0 bits (227), Expect = 3e-19
Identities = 48/102 (47%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI ++++ IV+FSKN+A S +CL EL I +CS +G+ ++P+FYDVDPS VRKQ G +G
Sbjct: 58 AIREARISIVIFSKNYAASTWCLNELVEIDNCSKYFGQKVIPVFYDVDPSHVRKQIGEFG 117
Query: 77 ESLAKLEEIAP--QVQRWREALQLVGNISGWDLCHKPQHAEL 116
+ K E P Q QRW +AL + NI+G DL + P A +
Sbjct: 118 KVFKKTCEDKPADQKQRWVKALTDISNIAGEDLRNGPNDAHM 159
>At5g18370 disease resistance protein -like
Length = 1210
Score = 126 bits (316), Expect = 2e-29
Identities = 63/144 (43%), Positives = 90/144 (61%), Gaps = 1/144 (0%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
+ VF SFRG D R F H+ + +GI F DD ++K+GE I PGLF+AI S++ IV
Sbjct: 61 HQVFPSFRGEDVRKGFLSHIQKEFKSKGIVPFIDD-EMKRGESIGPGLFQAIRESKIAIV 119
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
+ SKNYASS+WCL EL I++C ++ G+ ++ +FY VDPS+V+KQ+G +G+A K
Sbjct: 120 LLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFYQVDPSDVRKQTGDFGKAFKKTCVGK 179
Query: 262 GLNMVHRWRETLTQVGNISSSNPR 285
+ RW L V NI + R
Sbjct: 180 TQEVKQRWSRALMDVANILGQDSR 203
Score = 82.0 bits (201), Expect = 3e-16
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 2 DDYHPGDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFY 61
D+ G+ + F AI +S++ IV+ SKN+A S +CL EL I++C G+ ++ +FY
Sbjct: 95 DEMKRGESIGPGLFQAIRESKIAIVLLSKNYASSSWCLNELVEIMNCREEIGQTVMTVFY 154
Query: 62 DVDPSEVRKQSGGYGESLAK--LEEIAPQVQRWREALQLVGNISGWD 106
VDPS+VRKQ+G +G++ K + + QRW AL V NI G D
Sbjct: 155 QVDPSDVRKQTGDFGKAFKKTCVGKTQEVKQRWSRALMDVANILGQD 201
>At5g48770 disease resistance protein
Length = 1190
Score = 125 bits (314), Expect = 3e-29
Identities = 65/146 (44%), Positives = 89/146 (60%), Gaps = 2/146 (1%)
Query: 141 NYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYI 200
NYDVF+SFRG DTR HL+AAL +GI F+DD L+ G+ I+ L RAIE S+ +
Sbjct: 13 NYDVFLSFRGEDTRRTIVSHLYAALGAKGIITFKDDQDLEVGDHISSHLRRAIEGSKFAV 72
Query: 201 VVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFK 260
VV S+ Y +S WCL EL+ I+ +LP+FY+VDPS+V+ Q G +G L ++
Sbjct: 73 VVLSERYTTSRWCLMELQLIMELYNLGKLKVLPLFYEVDPSDVRHQRGSFG--LERYQGP 130
Query: 261 HGLNMVHRWRETLTQVGNISSSNPRY 286
++V RWR L V N+S RY
Sbjct: 131 EFADIVQRWRVALCMVANLSGMVSRY 156
Score = 77.4 bits (189), Expect = 8e-15
Identities = 49/123 (39%), Positives = 68/123 (54%), Gaps = 1/123 (0%)
Query: 3 DYHPGDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYD 62
D GD + AIE S+ +VV S+ + S +CL+EL I+ L +LP+FY+
Sbjct: 50 DLEVGDHISSHLRRAIEGSKFAVVVLSERYTTSRWCLMELQLIMELYNLGKLKVLPLFYE 109
Query: 63 VDPSEVRKQSGGYGESLAKLEEIAPQVQRWREALQLVGNISGWDLCHKPQHA-ELENIIE 121
VDPS+VR Q G +G + E A VQRWR AL +V N+SG + A LE I+E
Sbjct: 110 VDPSDVRHQRGSFGLERYQGPEFADIVQRWRVALCMVANLSGMVSRYCADEAMMLEEIVE 169
Query: 122 HIN 124
I+
Sbjct: 170 VIS 172
>At1g72890 hypothetical protein
Length = 438
Score = 124 bits (311), Expect = 6e-29
Identities = 62/150 (41%), Positives = 92/150 (61%)
Query: 131 SSRTKDLVEINYDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLF 190
SS + +DVF+SFRG DTR NF L+ AL +GI F+DD +L++G I P L
Sbjct: 28 SSSSSSFTPQKFDVFLSFRGKDTRKNFVSFLYKALVSKGIRTFKDDEELERGRPIPPELR 87
Query: 191 RAIEASQLYIVVFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGY 250
+AI+ S++ +VV S Y +S+WCL EL IL K ++PIFY+++PS+V++QSG
Sbjct: 88 QAIKGSRIAVVVVSVTYPASSWCLEELREILKLEKLGLLTVIPIFYEINPSDVRRQSGVV 147
Query: 251 GEALSKHGFKHGLNMVHRWRETLTQVGNIS 280
+ KH + V WRE LT++ ++S
Sbjct: 148 SKQFKKHEKRQSRERVKSWREALTKLASLS 177
Score = 63.2 bits (152), Expect = 2e-10
Identities = 35/90 (38%), Positives = 55/90 (60%), Gaps = 2/90 (2%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI+ S++ +VV S + S +CL EL IL L ++PIFY+++PS+VR+QSG
Sbjct: 89 AIKGSRIAVVVVSVTYPASSWCLEELREILKLEKLGLLTVIPIFYEINPSDVRRQSGVVS 148
Query: 77 ESLAKLE--EIAPQVQRWREALQLVGNISG 104
+ K E + +V+ WREAL + ++SG
Sbjct: 149 KQFKKHEKRQSRERVKSWREALTKLASLSG 178
>At1g17600 disease resistance protein, putative
Length = 960
Score = 122 bits (307), Expect = 2e-28
Identities = 64/139 (46%), Positives = 88/139 (63%), Gaps = 2/139 (1%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVF+SFRG DTR HL+AAL RGI F+DD +L+ G+ I+ L RA+ +S +V
Sbjct: 12 YDVFLSFRGEDTRKTIVSHLYAALDSRGIVTFKDDQRLEIGDHISDELHRALGSSSFAVV 71
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
V S+NYA+S WCL EL+ I+ K+ + PIFY VDPS V+ Q G + +L K+
Sbjct: 72 VLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPSVVRHQLGSF--SLVKYQGLE 129
Query: 262 GLNMVHRWRETLTQVGNIS 280
++ V RWRE L + N+S
Sbjct: 130 MVDKVLRWREALNLIANLS 148
Score = 70.1 bits (170), Expect = 1e-12
Identities = 42/100 (42%), Positives = 58/100 (58%), Gaps = 4/100 (4%)
Query: 7 GDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPS 66
GD + + A+ S +VV S+N+A S +CL+EL I+ + PIFY VDPS
Sbjct: 52 GDHISDELHRALGSSSFAVVVLSENYATSRWCLLELQLIMELMKEGRLEVFPIFYGVDPS 111
Query: 67 EVRKQSGGYGESLAKLE--EIAPQVQRWREALQLVGNISG 104
VR Q G + SL K + E+ +V RWREAL L+ N+SG
Sbjct: 112 VVRHQLGSF--SLVKYQGLEMVDKVLRWREALNLIANLSG 149
>At4g11170 RPP1-WsA-like disease resistance protein
Length = 1174
Score = 122 bits (306), Expect = 2e-28
Identities = 61/144 (42%), Positives = 86/144 (59%), Gaps = 1/144 (0%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVF SFRG D R NF HL + +GI FRDD +K+ I L AI S++ +V
Sbjct: 11 YDVFPSFRGEDVRNNFLSHLLKEFESKGIVTFRDD-HIKRSHTIGHELRAAIRESKISVV 69
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
+FS+NYASS+WCL EL I+ C ++ G ++P+FY VDPS+++KQ+G +G + +
Sbjct: 70 LFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFGMSFLETCCGK 129
Query: 262 GLNMVHRWRETLTQVGNISSSNPR 285
H WR LT NI +P+
Sbjct: 130 TEERQHNWRRALTDAANILGDHPQ 153
Score = 73.2 bits (178), Expect = 2e-13
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 13/100 (13%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI +S++ +V+FS+N+A S +CL EL I+ C G ++P+FY VDPS++RKQ+G +G
Sbjct: 60 AIRESKISVVLFSENYASSSWCLDELIEIMKCKEEQGLKVMPVFYKVDPSDIRKQTGKFG 119
Query: 77 ESL-----AKLEEIAPQVQRWREALQLVGNISG-----WD 106
S K EE + WR AL NI G WD
Sbjct: 120 MSFLETCCGKTEE---RQHNWRRALTDAANILGDHPQNWD 156
>At1g72910 unknown protein
Length = 380
Score = 122 bits (306), Expect = 2e-28
Identities = 62/139 (44%), Positives = 85/139 (60%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVF+SFRG DTR NF L+ L RR I F+DD +L+ G+ I+ L R IE S+ +V
Sbjct: 9 YDVFLSFRGHDTRQNFISFLYKELVRRSIRTFKDDKELENGQRISSELKRTIEVSRFAVV 68
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
V S+ YA+S+WCL EL I+ KK ++PIFY V+P+ V+ Q+G E KHG +
Sbjct: 69 VVSETYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHGSRE 128
Query: 262 GLNMVHRWRETLTQVGNIS 280
V +WR+ LT +S
Sbjct: 129 DHEKVLKWRQALTNFAQLS 147
Score = 55.1 bits (131), Expect = 4e-08
Identities = 37/95 (38%), Positives = 52/95 (53%), Gaps = 6/95 (6%)
Query: 18 IEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYGE 77
IE S+ +VV S+ +A S +CL EL I+ ++PIFY V+P+ VR Q+G E
Sbjct: 60 IEVSRFAVVVVSETYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAE 119
Query: 78 SLAK--LEEIAPQVQRWREAL----QLVGNISGWD 106
K E +V +WR+AL QL G+ SG D
Sbjct: 120 QFKKHGSREDHEKVLKWRQALTNFAQLSGDCSGDD 154
>At1g72930 putative protein
Length = 176
Score = 122 bits (305), Expect = 3e-28
Identities = 61/139 (43%), Positives = 84/139 (59%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVF+SFRG DTR NF L+ L RR I F+DD +L+ G+ +P L IE S+ +V
Sbjct: 9 YDVFLSFRGHDTRHNFISFLYKELVRRSIRTFKDDKELENGQRFSPELKSPIEVSRFAVV 68
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
V S+NYA+S+WCL EL I+ KK ++PIFY V+P+ V+ Q+G E KH +
Sbjct: 69 VVSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAEQFKKHASRE 128
Query: 262 GLNMVHRWRETLTQVGNIS 280
V +WR+ LT +S
Sbjct: 129 DPEKVLKWRQALTNFAQLS 147
Score = 57.8 bits (138), Expect = 7e-09
Identities = 38/95 (40%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 18 IEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYGE 77
IE S+ +VV S+N+A S +CL EL I+ ++PIFY V+P+ VR Q+G E
Sbjct: 60 IEVSRFAVVVVSENYAASSWCLDELVTIMDFEKKGSITVMPIFYGVEPNHVRWQTGVLAE 119
Query: 78 SLAK--LEEIAPQVQRWREAL----QLVGNISGWD 106
K E +V +WR+AL QL G+ SG D
Sbjct: 120 QFKKHASREDPEKVLKWRQALTNFAQLSGDCSGDD 154
>At4g16950 disease resistance RPP5 like protein
Length = 1317
Score = 121 bits (304), Expect = 4e-28
Identities = 65/146 (44%), Positives = 86/146 (58%), Gaps = 5/146 (3%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVF SF G D R F HL AL + IN F D +++ IAP L AI +++ IV
Sbjct: 12 YDVFPSFSGVDVRKTFLSHLIEALDGKSINTFIDHG-IERSRTIAPELISAIREARISIV 70
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSK----H 257
+FSKNYASSTWCL EL I C G+ ++P+FYDVDPSEV+KQ+G +G+ K
Sbjct: 71 IFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFGKVFEKTCEVS 130
Query: 258 GFKHGLNMVHRWRETLTQVGNISSSN 283
K + RW + LT + NI+ +
Sbjct: 131 KDKQPGDQKQRWVQALTDIANIAGED 156
Score = 91.7 bits (226), Expect = 4e-19
Identities = 52/125 (41%), Positives = 76/125 (60%), Gaps = 8/125 (6%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI ++++ IV+FSKN+A S +CL EL I C G+ ++P+FYDVDPSEVRKQ+G +G
Sbjct: 61 AIREARISIVIFSKNYASSTWCLNELVEIHKCFNDLGQMVIPVFYDVDPSEVRKQTGEFG 120
Query: 77 ESLAKLEEIA------PQVQRWREALQLVGNISGWDLCHKPQHAELENIIEHINILGCKF 130
+ K E++ Q QRW +AL + NI+G DL + P A + I N + K
Sbjct: 121 KVFEKTCEVSKDKQPGDQKQRWVQALTDIANIAGEDLLNGPNEAHMVEKIS--NDVSNKL 178
Query: 131 SSRTK 135
+R+K
Sbjct: 179 ITRSK 183
>At1g72950 hypothetical protein
Length = 379
Score = 121 bits (303), Expect = 5e-28
Identities = 63/139 (45%), Positives = 81/139 (57%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
+DVF+SFRG DTR +F L+ L RR I F+DD +LK G I P L RAIE S+ +V
Sbjct: 11 FDVFLSFRGLDTRRSFISFLYKELIRRNIRTFKDDKELKNGRRITPELIRAIEGSRFAVV 70
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
V S NYA+S WCL EL I+ ++PIFY VDP V++Q G E KH +
Sbjct: 71 VVSVNYAASRWCLEELVKIMDFENMGSLKVMPIFYGVDPCHVRRQIGEVAEQFKKHEGRE 130
Query: 262 GLNMVHRWRETLTQVGNIS 280
V WR+ LT + +IS
Sbjct: 131 DHEKVLSWRQALTNLASIS 149
Score = 62.4 bits (150), Expect = 3e-10
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 7 GDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPS 66
G + + AIE S+ +VV S N+A S +CL EL I+ + ++PIFY VDP
Sbjct: 51 GRRITPELIRAIEGSRFAVVVVSVNYAASRWCLEELVKIMDFENMGSLKVMPIFYGVDPC 110
Query: 67 EVRKQSGGYGESLAKLE--EIAPQVQRWREALQLVGNISG 104
VR+Q G E K E E +V WR+AL + +ISG
Sbjct: 111 HVRRQIGEVAEQFKKHEGREDHEKVLSWRQALTNLASISG 150
>At5g44510 disease resistance protein-like
Length = 1187
Score = 120 bits (302), Expect = 6e-28
Identities = 59/144 (40%), Positives = 86/144 (58%), Gaps = 1/144 (0%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
+ VF+SFRG D R H+ QR GI F D+ ++K+G I P L +AI S++ I+
Sbjct: 40 HPVFLSFRGEDVRKGLLSHIQKEFQRNGITPFIDN-EMKRGGSIGPELLQAIRGSKIAII 98
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
+ S+NY SS WCL EL I+ C ++ G+ ++ +FYDVDPS+V+KQ G +G+ K
Sbjct: 99 LLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFGKVFKKTCVGR 158
Query: 262 GLNMVHRWRETLTQVGNISSSNPR 285
MV RW++ LT NI + R
Sbjct: 159 PEEMVQRWKQALTSAANILGEDSR 182
Score = 77.0 bits (188), Expect = 1e-14
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 2/92 (2%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI S++ I++ S+N+ S +CL EL I+ C G+ ++ +FYDVDPS+VRKQ G +G
Sbjct: 89 AIRGSKIAIILLSRNYGSSKWCLDELVEIMKCREELGQTVMTVFYDVDPSDVRKQKGDFG 148
Query: 77 ESLAKLEEIAPQ--VQRWREALQLVGNISGWD 106
+ K P+ VQRW++AL NI G D
Sbjct: 149 KVFKKTCVGRPEEMVQRWKQALTSAANILGED 180
>At4g16860 disease resistance RPP5 like protein
Length = 1256
Score = 120 bits (302), Expect = 6e-28
Identities = 64/144 (44%), Positives = 84/144 (57%), Gaps = 1/144 (0%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVF SF G D R F HL AL RR IN F D + + IA L AI +++ IV
Sbjct: 13 YDVFPSFSGVDVRKTFLSHLIEALDRRSINTFMDHG-IVRSCIIADALITAIREARISIV 71
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
+FS+NYASSTWCL EL I C KK + ++P+FY VDPS V+KQ GG+G+ K
Sbjct: 72 IFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFGDVFKKTCEDK 131
Query: 262 GLNMVHRWRETLTQVGNISSSNPR 285
+ RW + LT + N++ + R
Sbjct: 132 PEDQKQRWVKALTDISNLAGEDLR 155
Score = 82.8 bits (203), Expect = 2e-16
Identities = 44/100 (44%), Positives = 63/100 (63%), Gaps = 2/100 (2%)
Query: 17 AIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPSEVRKQSGGYG 76
AI ++++ IV+FS+N+A S +CL EL I C + ++P+FY VDPS VRKQ GG+G
Sbjct: 62 AIREARISIVIFSENYASSTWCLNELVEIHKCYKKGEQMVIPVFYGVDPSHVRKQIGGFG 121
Query: 77 ESLAKLEEIAP--QVQRWREALQLVGNISGWDLCHKPQHA 114
+ K E P Q QRW +AL + N++G DL + P A
Sbjct: 122 DVFKKTCEDKPEDQKQRWVKALTDISNLAGEDLRNGPTEA 161
>At3g04220 putative disease resistance protein
Length = 896
Score = 120 bits (301), Expect = 8e-28
Identities = 62/144 (43%), Positives = 87/144 (60%), Gaps = 1/144 (0%)
Query: 142 YDVFVSFRGPDTRFNFTDHLFAALQRRGINAFRDDTKLKKGEFIAPGLFRAIEASQLYIV 201
YDVF SFRG D R +F H+ QR+GI F D+ +K+GE I P L RAI S++ I+
Sbjct: 63 YDVFPSFRGEDVRKDFLSHIQKEFQRQGITPFVDNN-IKRGESIGPELIRAIRGSKIAII 121
Query: 202 VFSKNYASSTWCLRELEYILHCSKKYGKHILPIFYDVDPSEVQKQSGGYGEALSKHGFKH 261
+ SKNYASS+WCL EL I+ C ++ G+ ++ IFY VDPS V+K +G +G+
Sbjct: 122 LLSKNYASSSWCLDELVEIIKCKEEMGQTVIVIFYKVDPSLVKKLTGDFGKVFRNTCKGK 181
Query: 262 GLNMVHRWRETLTQVGNISSSNPR 285
+ RWRE +V I+ + R
Sbjct: 182 ERENIERWREAFKKVATIAGYDSR 205
Score = 73.2 bits (178), Expect = 2e-13
Identities = 39/103 (37%), Positives = 63/103 (60%), Gaps = 4/103 (3%)
Query: 7 GDLLIRKTFHAIEDSQVFIVVFSKNFADSCFCLVELAYILHCSVLYGKCILPIFYDVDPS 66
G+ + + AI S++ I++ SKN+A S +CL EL I+ C G+ ++ IFY VDPS
Sbjct: 102 GESIGPELIRAIRGSKIAIILLSKNYASSSWCLDELVEIIKCKEEMGQTVIVIFYKVDPS 161
Query: 67 EVRKQSGGYGE---SLAKLEEIAPQVQRWREALQLVGNISGWD 106
V+K +G +G+ + K +E ++RWREA + V I+G+D
Sbjct: 162 LVKKLTGDFGKVFRNTCKGKE-RENIERWREAFKKVATIAGYD 203
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.323 0.140 0.435
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,804,899
Number of Sequences: 26719
Number of extensions: 289718
Number of successful extensions: 1098
Number of sequences better than 10.0: 139
Number of HSP's better than 10.0 without gapping: 129
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 549
Number of HSP's gapped (non-prelim): 295
length of query: 287
length of database: 11,318,596
effective HSP length: 98
effective length of query: 189
effective length of database: 8,700,134
effective search space: 1644325326
effective search space used: 1644325326
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146863.3