BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146856.7 + phase: 0
(241 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g34160 cyclin delta-3 120 7e-28
At3g50070 cyclin D3-like protein 119 1e-27
At1g70210 unknown protein 115 2e-26
At5g67260 cyclin D3-like protein 114 5e-26
At2g22490 putative cyclin D 110 9e-25
At4g37630 putative protein 108 3e-24
At5g10440 cyclin protein - like 105 3e-23
At5g65420 D-type cyclin (emb|CAB41347.1) 104 4e-23
At4g03270 putative D-type cyclin 87 6e-18
At5g02110 putative protein 83 1e-16
At5g06150 mitosis-specific cyclin 1b 70 8e-13
At4g35620 cyclin 2b protein 69 2e-12
At3g11520 cyclin box 69 2e-12
At1g20610 hypothetical protein 69 3e-12
At5g25380 cyclin 3a 67 9e-12
At4g37490 cyclin cyc1 67 9e-12
At2g17620 putative cyclin 2 67 9e-12
At1g44110 mitotic cyclin a2-type, putative 67 1e-11
At2g26760 putative cyclin 64 9e-11
At5g11300 cyclin 3b 62 3e-10
>At4g34160 cyclin delta-3
Length = 376
Score = 120 bits (301), Expect = 7e-28
Identities = 77/213 (36%), Positives = 113/213 (52%), Gaps = 35/213 (16%)
Query: 9 FSLSSLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDD----EEEYIQYLFK 64
F L +L C E+ + D++ NSSL +++++P+ +L E+E + LF
Sbjct: 17 FLLDALYCEEE-------KWDDEGEEVEENSSL-SSSSSPFVVLQQDLFWEDEDLVTLFS 68
Query: 65 QETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTA 124
+E G C DD +L R A+ WI A +GF+ A
Sbjct: 69 KEEEQGLS------CLDD--------------VYLSTDRKEAVGWILRVNAHYGFSTLAA 108
Query: 125 YLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRFEN 181
L+I Y D+F+ S+ KPW +QL+SVACLS+AAK+EE VP L ++ +E Y FE
Sbjct: 109 VLAITYLDKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEA 168
Query: 182 KVIKNMELLILSTLEWKMGLPTPFAYLHYFFTK 214
K I+ MELLILSTLEWKM L TP +++ + +
Sbjct: 169 KTIQRMELLILSTLEWKMHLITPISFVDHIIRR 201
>At3g50070 cyclin D3-like protein
Length = 361
Score = 119 bits (299), Expect = 1e-27
Identities = 78/214 (36%), Positives = 114/214 (52%), Gaps = 38/214 (17%)
Query: 11 LSSLMCHEQDESTLIFEEDED------ESTFFINSSLDNNNNNPWFLLDDEEEYIQYLFK 64
L L C E+ E F E D E F+N L +++ +L D++E + K
Sbjct: 17 LDGLFCEEESE----FHEQVDLCDESVEKFPFLNLGLSDHD-----MLWDDDELSTLISK 67
Query: 65 QETGLGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTA 124
QE L YD E+ DD+ +L R A+DWIF ++ +GF TA
Sbjct: 68 QEPCL----------YD----EILDDE------FLVLCREKALDWIFKVKSHYGFNSLTA 107
Query: 125 YLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRFEN 181
L++NYFDRF++ R KPW QL ++ACLS+AAK+EE VP L ++ +E Y FE
Sbjct: 108 LLAVNYFDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEA 167
Query: 182 KVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKF 215
K I+ MELL+LSTL+W+M TP ++ + ++
Sbjct: 168 KTIQRMELLVLSTLDWRMHPVTPISFFDHIIRRY 201
>At1g70210 unknown protein
Length = 339
Score = 115 bits (289), Expect = 2e-26
Identities = 62/141 (43%), Positives = 91/141 (63%), Gaps = 4/141 (2%)
Query: 101 NARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAA 160
+AR ++ WI QA + F TAYL++NY DRFL R + E+ W +QLL+VACLS+AA
Sbjct: 80 SAREDSVAWILKVQAYYNFQPLTAYLAVNYMDRFLYARRLPETSGWPMQLLAVACLSLAA 139
Query: 161 KMEEQSVPPLSEYP---IEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKF-C 216
KMEE VP L ++ ++Y FE K IK MELL+LS L+W++ TPF ++ +F K
Sbjct: 140 KMEEILVPSLFDFQVAGVKYLFEAKTIKRMELLVLSVLDWRLRSVTPFDFISFFAYKIDP 199
Query: 217 NGSRSETIITKATQHIVTMVK 237
+G+ I+ AT+ I++ +K
Sbjct: 200 SGTFLGFFISHATEIILSNIK 220
>At5g67260 cyclin D3-like protein
Length = 367
Score = 114 bits (285), Expect = 5e-26
Identities = 68/196 (34%), Positives = 108/196 (54%), Gaps = 19/196 (9%)
Query: 31 DESTFFINSSLDNNNNNPWFLLDDEEEYIQYLFKQETGLGFGSITHFLCYDDHDVE-VED 89
+E T F+ LD++ + FL +E +++ F + FL DD + +
Sbjct: 24 EEETGFVEDDLDDDGDLD-FLEKSDESVVKFQF-------LPLLDMFLWDDDEILSLISK 75
Query: 90 DDSSKSLF-------WLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDE 142
++ + F +L + R A+DW+ ++ +GFT TA L++NYFDRF++ +
Sbjct: 76 ENETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQT 135
Query: 143 SKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRFENKVIKNMELLILSTLEWKM 199
KPW QL++VA LS+AAK+EE VP L + +E Y FE K I+ MELLILSTL+W+M
Sbjct: 136 DKPWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRM 195
Query: 200 GLPTPFAYLHYFFTKF 215
TP ++ + +F
Sbjct: 196 HPVTPISFFDHIIRRF 211
>At2g22490 putative cyclin D
Length = 361
Score = 110 bits (274), Expect = 9e-25
Identities = 76/238 (31%), Positives = 121/238 (49%), Gaps = 21/238 (8%)
Query: 13 SLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLDDE---EEYIQYLFKQETGL 69
+L C E ES +I + D+D+ + + + + N+ F DD I + + L
Sbjct: 4 NLACGETSESWII-DNDDDDINYGGGFTNEIDYNHQLFAKDDNFGGNGSIPMMGSSSSSL 62
Query: 70 GFGSITHFLCYD-------DHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQ 122
I L + D+ + D S+ R A+DWI A + F
Sbjct: 63 SEDRIKEMLVREIEFCPGTDYVKRLLSGDLDLSV------RNQALDWILKVCAHYHFGHL 116
Query: 123 TAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRF 179
LS+NY DRFL+ + + K WA QLL+V+CLS+A+KMEE VP + + +E + F
Sbjct: 117 CICLSMNYLDRFLTSYELPKDKDWAAQLLAVSCLSLASKMEETDVPHIVDLQVEDPKFVF 176
Query: 180 ENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRSETIITKATQHIVTMVK 237
E K IK MELL+++TL W++ TPF+++ YF K +G SE +I ++++ I+ K
Sbjct: 177 EAKTIKRMELLVVTTLNWRLQALTPFSFIDYFVDKI-SGHVSENLIYRSSRFILNTTK 233
>At4g37630 putative protein
Length = 321
Score = 108 bits (270), Expect = 3e-24
Identities = 82/234 (35%), Positives = 120/234 (51%), Gaps = 35/234 (14%)
Query: 10 SLSSLMCHEQDESTLIFEEDEDESTFFINSSLDNNNNNPWFLLD-DEEEYIQYLFKQETG 68
SL+ +CHE + S ED+DE+ I S + P F D+E+Y+ L +E
Sbjct: 7 SLALFLCHESESS---LNEDDDET---IERS---DKQEPHFTTTIDDEDYVADLVLKEN- 56
Query: 69 LGFGSITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSI 128
L F ++ + SS RL AIDWI + + L
Sbjct: 57 LRFETLPS-----------KTTSSSD--------RLIAIDWILTVHKNKIWVPTSNSLHC 97
Query: 129 NYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIEYRFENK--VIKN 186
N R +S + I + WA++LLSVACLS+AAKMEE+ VP LS+YP ++ F K VI+
Sbjct: 98 NLILRSVSPQKIHRYETWAMRLLSVACLSLAAKMEERIVPGLSQYPQDHDFVFKPDVIRK 157
Query: 187 MELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRS---ETIITKATQHIVTMVK 237
ELLILSTL+WKM L TPF Y +YF K + S + ++ +++ ++ + K
Sbjct: 158 TELLILSTLDWKMNLITPFHYFNYFLAKISQDNHSVSKDLVLLRSSDSLLALTK 211
>At5g10440 cyclin protein - like
Length = 317
Score = 105 bits (261), Expect = 3e-23
Identities = 56/145 (38%), Positives = 86/145 (58%), Gaps = 7/145 (4%)
Query: 101 NARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAA 160
N R+ A+ WI+ + F L++NY DRFLS + K W +QLL+VACLS+AA
Sbjct: 67 NVRIQALGWIWKACEELQFGPLCICLAMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAA 126
Query: 161 KMEEQSVPPLSEYPI---EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCN 217
K+EE +VP L + + + FE K ++ MELL+L+ L W++ TP +Y+ YF +K N
Sbjct: 127 KIEETNVPELMQLQVGAPMFVFEAKSVQRMELLVLNVLRWRLRAVTPCSYVRYFLSKI-N 185
Query: 218 GSRSE---TIITKATQHIVTMVKGN 239
G E ++T++ Q I + KG+
Sbjct: 186 GYDQEPHSRLVTRSLQVIASTTKGD 210
>At5g65420 D-type cyclin (emb|CAB41347.1)
Length = 308
Score = 104 bits (260), Expect = 4e-23
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 20/231 (8%)
Query: 15 MCHEQDESTLIFEED--EDESTFFINSSLDNNNNNPWFLLDDEEEYIQYLFKQETGLGFG 72
M E E +L+ E +DE + ++ + F + EE I + ++E
Sbjct: 1 MAEENLELSLLCTESNVDDEGMIVDETPIEISIPQMGFSQSESEEIIMEMVEKEK----- 55
Query: 73 SITHFLCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFD 132
L DD+ + D L R A++WI+ F L++NY D
Sbjct: 56 ---QHLPSDDYIKRLRSGDLD-----LNVGRRDALNWIWKACEVHQFGPLCFCLAMNYLD 107
Query: 133 RFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPI---EYRFENKVIKNMEL 189
RFLS + K W +QLL+VACLS+AAK+EE VP L + + ++ FE K ++ MEL
Sbjct: 108 RFLSVHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMEL 167
Query: 190 LILSTLEWKMGLPTPFAYLHYFFTKF--CNGSRSETIITKATQHIVTMVKG 238
L+L+ L+W++ TP +Y+ YF K C+ S T+I+++ Q I + KG
Sbjct: 168 LVLNKLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKG 218
>At4g03270 putative D-type cyclin
Length = 302
Score = 87.4 bits (215), Expect = 6e-18
Identities = 49/125 (39%), Positives = 79/125 (63%), Gaps = 3/125 (2%)
Query: 92 SSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLL 151
S KS +L + R AI I KF T YL++NY DRFLS + +SKPW ++L+
Sbjct: 47 SLKSSAFLLSNRNQAISSITQYSRKFDDPSLT-YLAVNYLDRFLSSEDMPQSKPWILKLI 105
Query: 152 SVACLSIAAKMEEQSVPPLSEYPIEYR-FENKVIKNMELLILSTLEWKMGLPTPFAYLHY 210
S++C+S++AKM + + +S+ P+E F+ ++I+ ME +IL L+W+M TPF++L +
Sbjct: 106 SLSCVSLSAKMRKPDM-SVSDLPVEGEFFDAQMIERMENVILGALKWRMRSVTPFSFLAF 164
Query: 211 FFTKF 215
F + F
Sbjct: 165 FISLF 169
>At5g02110 putative protein
Length = 341
Score = 83.2 bits (204), Expect = 1e-16
Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 7/162 (4%)
Query: 78 LCYDDHDVEVEDDDSSKSLFWLRNARLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSK 137
LC+++H + + SK L + R HA W+ T+++ + +T + + N FDRF+
Sbjct: 56 LCFNNHGDKFVEFFVSKKL---TDYRFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYM 112
Query: 138 RSIDESKPWAIQLLSVACLSIAAKMEEQSVPPLSEYPIE---YRFENKVIKNMELLILST 194
DE W ++L++V LSIA+K E + P L E +E + F + MEL+IL
Sbjct: 113 TCCDEWTNWMVELVAVTSLSIASKFNEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKA 172
Query: 195 LEWKMGLPTPFAYLHYFFTKFCNGSRSETIITKATQHIVTMV 236
LEW++ T + + +K I+ + T H++ ++
Sbjct: 173 LEWRVNAVTSYTFSQTLVSKI-GMVGDHMIMNRITNHLLDVI 213
>At5g06150 mitosis-specific cyclin 1b
Length = 445
Score = 70.5 bits (171), Expect = 8e-13
Identities = 43/147 (29%), Positives = 77/147 (52%), Gaps = 10/147 (6%)
Query: 86 EVEDDDSSKSLFWLR---NARLHAI--DWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSI 140
EVE + K ++ N ++ AI DW+ KF ++T YL++N DRFLS +++
Sbjct: 192 EVEKESQPKMYMHIQTEMNEKMRAILIDWLLEVHIKFELNLETLYLTVNIIDRFLSVKAV 251
Query: 141 DESKPWAIQLLSVACLSIAAKMEEQSVPPLSE--YPIEYRFENKVIKNMELLILSTLEWK 198
+ + +QL+ ++ L IA+K EE P +++ Y + + ++ I ME IL LEW
Sbjct: 252 PKRE---LQLVGISALLIASKYEEIWPPQVNDLVYVTDNAYSSRQILVMEKAILGNLEWY 308
Query: 199 MGLPTPFAYLHYFFTKFCNGSRSETII 225
+ +PT + +L F + E ++
Sbjct: 309 LTVPTQYVFLVRFIKASMSDPEMENMV 335
>At4g35620 cyclin 2b protein
Length = 429
Score = 69.3 bits (168), Expect = 2e-12
Identities = 37/107 (34%), Positives = 61/107 (56%), Gaps = 5/107 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ KF +T +L++N DRFLSK+++ K +QL+ + L +A K EE S
Sbjct: 209 IDWLIEVHDKFELMNETLFLTVNLIDRFLSKQAVARKK---LQLVGLVALLLACKYEEVS 265
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
VP + + + + + + ME ++LSTL++ M LPT + +L F
Sbjct: 266 VPIVEDLVVISDKAYTRTDVLEMEKIMLSTLQFNMSLPTQYPFLKRF 312
>At3g11520 cyclin box
Length = 414
Score = 68.9 bits (167), Expect = 2e-12
Identities = 38/121 (31%), Positives = 66/121 (54%), Gaps = 5/121 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ KF + +T YL++N DRFLS +++ + +QL+ V+ L IA+K EE
Sbjct: 195 IDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRE---LQLVGVSALLIASKYEEIW 251
Query: 167 VPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSRSETI 224
P +++ Y + + ++ I ME IL LEW + +PT + +L F + + E +
Sbjct: 252 PPQVNDLVYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVFLVRFIKASGSDQKLENL 311
Query: 225 I 225
+
Sbjct: 312 V 312
>At1g20610 hypothetical protein
Length = 429
Score = 68.6 bits (166), Expect = 3e-12
Identities = 37/107 (34%), Positives = 59/107 (54%), Gaps = 5/107 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ KF +T YL+IN DRFL+ I K +QL+ V L +A K EE S
Sbjct: 214 IDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKK---LQLVGVTALLLACKYEEVS 270
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
VP + + + + + + + +ME L+ +TL++ LPTP+ ++ F
Sbjct: 271 VPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRF 317
>At5g25380 cyclin 3a
Length = 444
Score = 67.0 bits (162), Expect = 9e-12
Identities = 34/107 (31%), Positives = 60/107 (55%), Gaps = 5/107 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ ++ T YL++N DRF+S I++ K +QLL + C+ IA+K EE S
Sbjct: 218 IDWLVEVSEEYKLVSDTLYLTVNLIDRFMSHNYIEKQK---LQLLGITCMLIASKYEEIS 274
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
P L E+ + + + +ME+ +L++L +++ +PT +L F
Sbjct: 275 APRLEEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRF 321
>At4g37490 cyclin cyc1
Length = 428
Score = 67.0 bits (162), Expect = 9e-12
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 5/125 (4%)
Query: 103 RLHAIDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKM 162
RL ++W+ + +F +T YL++N DRFLS + + + +QL+ ++ L ++AK
Sbjct: 197 RLILVEWLIDVHVRFELNPETFYLTVNILDRFLSVKPVPRKE---LQLVGLSALLMSAKY 253
Query: 163 EEQSVPPLSEYP--IEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFFTKFCNGSR 220
EE P + + ++ + +K I ME ILSTLEW + +PT + +L F +
Sbjct: 254 EEIWPPQVEDLVDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIKASIADEK 313
Query: 221 SETII 225
E ++
Sbjct: 314 MENMV 318
>At2g17620 putative cyclin 2
Length = 429
Score = 67.0 bits (162), Expect = 9e-12
Identities = 36/107 (33%), Positives = 60/107 (55%), Gaps = 5/107 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ KF +T +L++N DRFLSK+++ K +QL+ + L +A K EE S
Sbjct: 208 IDWLIEVHDKFDLINETLFLTVNLIDRFLSKQNVMRKK---LQLVGLVALLLACKYEEVS 264
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
VP + + + + + + ME +LSTL++ + LPT + +L F
Sbjct: 265 VPVVEDLVLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRF 311
>At1g44110 mitotic cyclin a2-type, putative
Length = 460
Score = 66.6 bits (161), Expect = 1e-11
Identities = 37/107 (34%), Positives = 58/107 (53%), Gaps = 5/107 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
+DW+ ++ +T YL++NY DR+LS I K +QLL VAC+ IAAK EE
Sbjct: 232 VDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQK---LQLLGVACMMIAAKYEEIC 288
Query: 167 VPPLSE--YPIEYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYF 211
P + E Y + + + +ME +L+ L+++M PT +L F
Sbjct: 289 APQVEEFCYITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRF 335
>At2g26760 putative cyclin
Length = 387
Score = 63.5 bits (153), Expect = 9e-11
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ + KF +T YL+IN DRFLS + + +QLL + + IA K EE
Sbjct: 166 IDWLVDVHRKFELMPETLYLTINLVDRFLSLTMVHRRE---LQLLGLGAMLIACKYEEIW 222
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYL 208
P ++++ + + K + ME IL +EW + +PTP+ +L
Sbjct: 223 APEVNDFVCISDNAYNRKQVLAMEKSILGQVEWYITVPTPYVFL 266
>At5g11300 cyclin 3b
Length = 434
Score = 62.0 bits (149), Expect = 3e-10
Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 5/108 (4%)
Query: 107 IDWIFNTQAKFGFTVQTAYLSINYFDRFLSKRSIDESKPWAIQLLSVACLSIAAKMEEQS 166
IDW+ + T YL++N DRFLS I+ + +QLL V+C+ IA+K EE S
Sbjct: 210 IDWLVEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQR---LQLLGVSCMLIASKYEELS 266
Query: 167 VPPLSEYPI--EYRFENKVIKNMELLILSTLEWKMGLPTPFAYLHYFF 212
P + E+ + + +ME+ IL+ + +++ +PT +L F
Sbjct: 267 APGVEEFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLSALF 314
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.320 0.136 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,830,516
Number of Sequences: 26719
Number of extensions: 266193
Number of successful extensions: 829
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 752
Number of HSP's gapped (non-prelim): 51
length of query: 241
length of database: 11,318,596
effective HSP length: 96
effective length of query: 145
effective length of database: 8,753,572
effective search space: 1269267940
effective search space used: 1269267940
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146856.7