BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146842.1 + phase: 0
(216 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04760 I-box binding factor-like protein 109 1e-24
At5g08520 unknown protein 94 7e-20
At3g10580 hypothetical protein 89 2e-18
At5g58900 I-box binding factor - like protein 88 3e-18
At5g23650 putative protein 88 4e-18
At5g05790 unknown protein 87 7e-18
At5g01200 putative protein 86 1e-17
At2g38090 MYB family transcription factor like protein 86 1e-17
At4g09450 unknown protein (At4g09450) 84 6e-17
At3g11280 unknown protein 83 1e-16
At1g49010 hypothetical protein 78 3e-15
At3g10590 hypothetical protein 74 4e-14
At3g10585 putative protein 70 1e-12
At1g74840 MYB family transcription factor like protein 68 3e-12
At1g70000 unknown protein 68 3e-12
At5g47390 Myb-related transcription activator-like 68 4e-12
At3g16350 putative MYB family transcription factor 67 5e-12
At1g19000 unknown protein 63 1e-10
At5g61620 transcriptional activator - like protein 61 5e-10
At5g56840 putative protein 59 2e-09
>At5g04760 I-box binding factor-like protein
Length = 215
Score = 109 bits (272), Expect = 1e-24
Identities = 68/163 (41%), Positives = 95/163 (57%), Gaps = 7/163 (4%)
Query: 10 SKEWTWDENKIFETILFEYLEEVQEGRWENIGLVCGRSSTEVKEHYETLLHDLALIEEGL 69
S +WT E+K+FE L + E RWE I +S+ EV+EHYE L+HD+ I+ G
Sbjct: 3 SSQWTRSEDKMFEQALVLF-PEGSPNRWERIADQLHKSAGEVREHYEVLVHDVFEIDSGR 61
Query: 70 VDFSTNSDDFIISKASTDE--NKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKW 127
VD DD + A D + +K+ + R WTE EH+LFL G++ +GKG W
Sbjct: 62 VDVPDYMDDSAAAAAGWDSAGQISFGSKHGESERKRGTPWTENEHKLFLIGLKRYGKGDW 121
Query: 128 KLISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFY 169
+ IS++ V TRT +QVASHAQK+FL Q S K +KRS+ +
Sbjct: 122 RSISRNVVVTRTPTQVASHAQKYFLRQ---NSVKKERKRSSIH 161
>At5g08520 unknown protein
Length = 298
Score = 93.6 bits (231), Expect = 7e-20
Identities = 69/210 (32%), Positives = 115/210 (53%), Gaps = 28/210 (13%)
Query: 13 WTWDENKIFETILFEYLEEVQEGRWENIGL-VCGRSSTEVKEHYETLLHDLALIEEGLVD 71
W+ +++ FE L +E +E RWE I V G+S ++KEHYE L+ D+ IE G V
Sbjct: 12 WSREDDIAFERALANNTDESEE-RWEKIAADVPGKSVEQIKEHYELLVEDVTRIESGCVP 70
Query: 72 FSTNS----------DDFIISKA-----STDENKAPPTKNKTKKVVRVKHWTEEEHRLFL 116
D+ SK + + N+A +K+ ++ + WTE+EHRLFL
Sbjct: 71 LPAYGSPEGSNGHAGDEGASSKKGGNSHAGESNQAGKSKSDQERRKGIA-WTEDEHRLFL 129
Query: 117 EGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYITSLKG 175
G++ +GKG W+ IS++ V TRT +QVASHAQK+F+ +L+ +K ++RS+ + + G
Sbjct: 130 LGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFI-RLNSMNKD--RRRSSIHDITSVG 186
Query: 176 NSK------PLLNKDNIPSPSTSWDGNFHP 199
N+ P+ ++N + + + + N P
Sbjct: 187 NADVSTPQGPITGQNNSNNNNNNNNNNSSP 216
>At3g10580 hypothetical protein
Length = 287
Score = 88.6 bits (218), Expect = 2e-18
Identities = 54/149 (36%), Positives = 77/149 (51%), Gaps = 6/149 (4%)
Query: 13 WTWDENKIFETILFEYLEEVQEGRWENIGLVCGRSSTEVKEHYETLLHDLALIEEGLVDF 72
W D++K FE L + E ENI + EV +Y+ L+ D+ LIE G
Sbjct: 8 WKRDDDKRFELALVRFPAEGSPDFLENIAQFLQKPLKEVYSYYQALVDDVTLIESGKYPL 67
Query: 73 STNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQ 132
+D +S ++K T K + W+ EEHRLFL+G+ +GKG WK IS+
Sbjct: 68 PKYPEDDYVSLPEATKSKTQGTGKK-----KGIPWSPEEHRLFLDGLNKYGKGDWKSISR 122
Query: 133 H-VRTRTASQVASHAQKHFLHQLDGTSKK 160
V +R+ QVASHAQK+FL Q + K+
Sbjct: 123 ECVTSRSPMQVASHAQKYFLRQKNKKGKR 151
>At5g58900 I-box binding factor - like protein
Length = 288
Score = 88.2 bits (217), Expect = 3e-18
Identities = 67/196 (34%), Positives = 96/196 (48%), Gaps = 18/196 (9%)
Query: 8 GKSKEWTWDENKIFETILFEYLEEVQEGRWENIGLVC-GRSSTEVKEHYETLLHDLALIE 66
G+ WT ENK FE L Y + + RW+ + V G++ ++V Y L D++ IE
Sbjct: 29 GEGATWTAAENKAFENALAVYDDNTPD-RWQKVAAVIPGKTVSDVIRQYNDLEADVSSIE 87
Query: 67 EGLVDFS--TNSDDFIISKASTDE--NKAPPTK---NKTKKVVRVKH--------WTEEE 111
GL+ S F + A N P NK + R WTEEE
Sbjct: 88 AGLIPVPGYITSPPFTLDWAGGGGGCNGFKPGHQVCNKRSQAGRSPELERKKGVPWTEEE 147
Query: 112 HRLFLEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYI 170
H+LFL G++ +GKG W+ IS++ V TRT +QVASHAQK+F+ QL G K +
Sbjct: 148 HKLFLMGLKKYGKGDWRNISRNFVITRTPTQVASHAQKYFIRQLSGGKDKRRASIHDITT 207
Query: 171 TSLKGNSKPLLNKDNI 186
+L+ + NK +I
Sbjct: 208 VNLEEEASLETNKSSI 223
>At5g23650 putative protein
Length = 337
Score = 87.8 bits (216), Expect = 4e-18
Identities = 66/182 (36%), Positives = 95/182 (51%), Gaps = 23/182 (12%)
Query: 13 WTWDENKIFETILFEYLEEVQEGRWENIGLVC-GRSSTEVKEHYETLLHDLALIEEGLVD 71
W+ D++ FE L Y ++ E RW+ I V G++ +V EHY L D+ LIE G V
Sbjct: 13 WSKDDDIAFEKALAIYNDKT-EIRWKKIATVVPGKTLEQVIEHYNILARDVMLIESGCVR 71
Query: 72 FSTNSDDFI-------------ISKASTDENKAPPTKNKTK---KVVRVKHWTEEEHRLF 115
+ DDF+ I + D K K+K K R W EHR F
Sbjct: 72 LP-DYDDFLEEPNHNAFGKERSILEGGNDRKYESKHKGKSKLKQKRRRGVPWKPFEHRQF 130
Query: 116 LEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYITSLK 174
L G++ +GKG W+ IS+H V TRT++QVASHAQK+F H ++ KK +KR + + ++
Sbjct: 131 LHGLKKYGKGDWRSISRHCVVTRTSTQVASHAQKYFAH-INSEDKK--RKRPSIHDITIA 187
Query: 175 GN 176
N
Sbjct: 188 EN 189
>At5g05790 unknown protein
Length = 277
Score = 87.0 bits (214), Expect = 7e-18
Identities = 57/161 (35%), Positives = 85/161 (52%), Gaps = 9/161 (5%)
Query: 9 KSKEWTWDENKIFETILFEYLEEVQEGRWENIGLVCGRSSTEVKEHYETLLHDLALIEEG 68
+S WT +ENK FE L Y ++ + ++ ++ G++ ++V Y L DL IE G
Sbjct: 27 QSSSWTKEENKKFERALAVYADDTPDRWFKVAAMIPGKTISDVMRQYSKLEEDLFDIEAG 86
Query: 69 LV------DFSTNSDDFIISKASTDENKAPPTKNKTKKVVRVK--HWTEEEHRLFLEGIE 120
LV + D ++S D + P + R K WTEEEHR FL G+
Sbjct: 87 LVPIPGYRSVTPCGFDQVVSPRDFDAYRKLPNGARGFDQDRRKGVPWTEEEHRRFLLGLL 146
Query: 121 IHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKK 160
+GKG W+ IS++ V ++T +QVASHAQK++ QL G K
Sbjct: 147 KYGKGDWRNISRNFVGSKTPTQVASHAQKYYQRQLSGAKDK 187
>At5g01200 putative protein
Length = 267
Score = 86.3 bits (212), Expect = 1e-17
Identities = 64/177 (36%), Positives = 94/177 (52%), Gaps = 32/177 (18%)
Query: 13 WTWDENKIFETILFEYLEEVQEGRWENIG-LVCGRSSTEVKEHYETLLHDLALIEEGLVD 71
WT +ENK FE L ++ W I L+ G++ +V + Y+ L D++ IE GL+
Sbjct: 30 WTAEENKRFEKALAYLDDKDNLESWSKIADLIPGKTVADVIKRYKELEDDVSDIEAGLIP 89
Query: 72 F---------STNSD------------DFII-----SKASTDENKAPPTKNKTKKVVRVK 105
+ NSD D+++ S A TD ++P + + KK V
Sbjct: 90 IPGYGGDASSAANSDYFFGLENSSYGYDYVVGGKRSSPAMTDCFRSPMPEKERKKGVP-- 147
Query: 106 HWTEEEHRLFLEGIEIHGKGKWKLISQ-HVRTRTASQVASHAQKHFLHQL-DGTSKK 160
WTE+EH FL G++ +GKG W+ I++ V TRT +QVASHAQK+FL QL DG K+
Sbjct: 148 -WTEDEHLRFLMGLKKYGKGDWRNIAKSFVTTRTPTQVASHAQKYFLRQLTDGKDKR 203
>At2g38090 MYB family transcription factor like protein
Length = 298
Score = 86.3 bits (212), Expect = 1e-17
Identities = 57/178 (32%), Positives = 90/178 (50%), Gaps = 27/178 (15%)
Query: 7 DGKSKEWTWDENKIFETILFEYLEEVQEGRWENIG-LVCGRSSTEVKEHYETLLHDLALI 65
+ + +WT +ENK FE L Y ++ + RW + ++ G++ +V + Y L D++ I
Sbjct: 23 ENRGTKWTAEENKKFENALAFYDKDTPD-RWSRVAAMLPGKTVGDVIKQYRELEEDVSDI 81
Query: 66 EEGLVDF----------------------STNSDDFIISKASTDENKAPPTKNKTKKVVR 103
E GL+ N + + S A A T +K +
Sbjct: 82 EAGLIPIPGYASDSFTLDWGGYDGASGNNGFNMNGYYFSAAGGKRGSAARTAEHERK--K 139
Query: 104 VKHWTEEEHRLFLEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKK 160
WTEEEHR FL G++ +GKG W+ I+++ V TRT +QVASHAQK+F+ Q++G K
Sbjct: 140 GVPWTEEEHRQFLMGLKKYGKGDWRNIARNFVTTRTPTQVASHAQKYFIRQVNGGKDK 197
>At4g09450 unknown protein (At4g09450)
Length = 200
Score = 84.0 bits (206), Expect = 6e-17
Identities = 57/163 (34%), Positives = 83/163 (49%), Gaps = 12/163 (7%)
Query: 12 EWTWDENKIFETILFEYLEEVQEGRWENIGLVCGRSSTEVKEHYETLLHDLALIEEGLVD 71
+WT ++K FE L + + E ENI + EV+ +Y L+HD+ IE G
Sbjct: 6 QWTRVDDKRFELALLQ-IPEGSPNFIENIAYYLQKPVKEVEYYYCALVHDIERIESGKYV 64
Query: 72 FSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLIS 131
+D + E+K K W+EEE RLFLEG+ GKG WK IS
Sbjct: 65 LPKYPEDDYVKLTEAGESKGNGKKTGIP-------WSEEEQRLFLEGLNKFGKGDWKNIS 117
Query: 132 QH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYITSL 173
++ V++RT++QVASHAQK+F Q + T KR + + +L
Sbjct: 118 RYCVKSRTSTQVASHAQKYFARQ---KQESTNTKRPSIHDMTL 157
>At3g11280 unknown protein
Length = 263
Score = 83.2 bits (204), Expect = 1e-16
Identities = 55/158 (34%), Positives = 82/158 (51%), Gaps = 3/158 (1%)
Query: 6 NDGKSKEWTWDENKIFETILFEYLEEVQEGRWENIGLVCGRSSTEVKEHYETLLHDLALI 65
+ S WT +ENK+FE L Y E+ + ++ ++ G++ +V + Y L D+ I
Sbjct: 26 HSSSSGSWTKEENKMFERALAIYAEDSPDRWFKVASMIPGKTVFDVMKQYSKLEEDVFDI 85
Query: 66 EEGLVDFSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKH--WTEEEHRLFLEGIEIHG 123
E G V TD + P+ + R K WTEEEHR FL G+ +G
Sbjct: 86 EAGRVPIPGYPAASSPLGFDTDMCRKRPSGARGSDQDRKKGVPWTEEEHRRFLLGLLKYG 145
Query: 124 KGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKK 160
KG W+ IS++ V ++T +QVASHAQK++ QL G K
Sbjct: 146 KGDWRNISRNFVVSKTPTQVASHAQKYYQRQLSGAKDK 183
>At1g49010 hypothetical protein
Length = 441
Score = 78.2 bits (191), Expect = 3e-15
Identities = 57/177 (32%), Positives = 88/177 (49%), Gaps = 41/177 (23%)
Query: 13 WTWDENKIFETILFEYL--EEVQEGRWENIG-LVCGRSSTEVKEHYETLLHDLALIEEGL 69
W+ +E K FE + + EE+ E +W + +V ++ EVK+HY+ LL D+ IE G
Sbjct: 8 WSREEEKAFENAIALHCVEEEITEDQWNKMSSMVPSKALEEVKKHYQILLEDVKAIENGQ 67
Query: 70 VDFST--NSDDFIISKAS---------------TDENKAPP-----------------TK 95
V + I+ +A+ + E K P +
Sbjct: 68 VPLPRYHHRKGLIVDEAAAAATSPANRDSHSSGSSEKKPNPGTSGISSSNGGRSGGSRAE 127
Query: 96 NKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFL 151
+ +K + WTEEEHRLFL G++ GKG W+ IS++ V +RT +QVASHAQK+F+
Sbjct: 128 QERRKGIP---WTEEEHRLFLLGLDKFGKGDWRSISRNFVISRTPTQVASHAQKYFI 181
>At3g10590 hypothetical protein
Length = 206
Score = 74.3 bits (181), Expect = 4e-14
Identities = 59/193 (30%), Positives = 95/193 (48%), Gaps = 20/193 (10%)
Query: 10 SKEWTWDENKIFETILFEYLEEVQEGRWENIGLVCGRSSTEVKEHYETLLHDLALIE--E 67
S WT D+N+ F++ L ++ + + R N+ + EVK +YE L++D+ L + E
Sbjct: 4 SPRWTEDDNRRFKSALSQFPPDNK--RLVNVAQHLPKPLEEVKYYYEKLVNDVYLPKPLE 61
Query: 68 GLVD-----FSTNSDDFIISKASTDENKAPP-------TKNKTKKVVRVKHWTEEEHRLF 115
+ ++ K + D N+ P +++K +K WTEEEHRLF
Sbjct: 62 NVTQHLQKPMEMEEMKYMYEKMANDVNQMPEYVPLAESSQSKRRKKDTPNPWTEEEHRLF 121
Query: 116 LEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYITSLK 174
L+G++ +G+G L S + V+T+T QV+SHAQ + + D K K+RS F IT
Sbjct: 122 LQGLKKYGEGASTLTSTNFVKTKTPRQVSSHAQYYKRQKSD---NKKEKRRSIFDITLES 178
Query: 175 GNSKPLLNKDNIP 187
P N P
Sbjct: 179 TEGNPDSGNQNPP 191
>At3g10585 putative protein
Length = 170
Score = 69.7 bits (169), Expect = 1e-12
Identities = 56/168 (33%), Positives = 82/168 (48%), Gaps = 11/168 (6%)
Query: 13 WTWDENKIFETILFEYLEEVQEGRWENIGLVCGRSSTEVKEHYETLL-HDLALIEEGLVD 71
WT D +K FE L + E E I + EVK +Y+ +L +D+ LIE G
Sbjct: 7 WTRDNDKRFELALVIF-PEGSPYFLEYIAEFLQKPLEEVKYYYDAILVYDVVLIESGKYA 65
Query: 72 FSTNSDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEI--HGKGKWKL 129
+ + +S E+K +T ++ R+ WTEEEHR L G++ +GKG W +
Sbjct: 66 LPKYPEAYYVSLTEATESK----HGETNQIPRIIPWTEEEHRN-LAGVDALRYGKGAWSM 120
Query: 130 ISQHVRTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFYITSLKGNS 177
IS+ T T QVASHAQK+ Q + K+ + + S KG S
Sbjct: 121 ISREFVTST--QVASHAQKYDKRQKLDSKKRKRWSVLDITLESTKGKS 166
>At1g74840 MYB family transcription factor like protein
Length = 265
Score = 68.2 bits (165), Expect = 3e-12
Identities = 39/73 (53%), Positives = 52/73 (70%), Gaps = 5/73 (6%)
Query: 84 ASTDENKAPPTKNKTKKVVRVKH--WTEEEHRLFLEGIEIHGKGKWKLISQH-VRTRTAS 140
AS DE A P + K+ R + WTEEEH+LFL G++ GKG WK IS++ V+TRT++
Sbjct: 75 ASADE--ALPMSSSNGKIERKRGVPWTEEEHKLFLLGLQRVGKGDWKGISRNFVKTRTST 132
Query: 141 QVASHAQKHFLHQ 153
QVASHAQK+FL +
Sbjct: 133 QVASHAQKYFLRR 145
>At1g70000 unknown protein
Length = 261
Score = 68.2 bits (165), Expect = 3e-12
Identities = 42/87 (48%), Positives = 59/87 (67%), Gaps = 7/87 (8%)
Query: 95 KNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQ 153
+N+ +K R WTEEEHRLFL G+ GKG W+ IS++ V+TRT +QVASHAQK+FL +
Sbjct: 90 RNRERK--RGTPWTEEEHRLFLTGLHKVGKGDWRGISRNFVKTRTPTQVASHAQKYFLRR 147
Query: 154 LDGTSKKTYKKRSNFYIT--SLKGNSK 178
+ ++ ++ S F IT S G+SK
Sbjct: 148 TNQNRRR--RRSSLFDITPDSFIGSSK 172
>At5g47390 Myb-related transcription activator-like
Length = 365
Score = 67.8 bits (164), Expect = 4e-12
Identities = 39/95 (41%), Positives = 59/95 (62%), Gaps = 16/95 (16%)
Query: 76 SDDFIISKASTDENKAPPTKNKTKKVVRVKHWTEEEHRLFLEGIEIHGKGKWKLISQ-HV 134
S+DF+ +S+ E K + WTEEEHR+FL G++ GKG W+ IS+ +V
Sbjct: 79 SEDFVAGSSSSRERK------------KGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYV 126
Query: 135 RTRTASQVASHAQKHFLHQLDGTSKKTYKKRSNFY 169
TRT +QVASHAQK+F+ Q + + + K+RS+ +
Sbjct: 127 TTRTPTQVASHAQKYFIRQSNVSRR---KRRSSLF 158
>At3g16350 putative MYB family transcription factor
Length = 387
Score = 67.4 bits (163), Expect = 5e-12
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 7/105 (6%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQ-HVRTRTASQVASHAQKHFLHQLDGTSKKTYKKR 165
WTEEEHRLFL G++ GKG W+ IS+ +V +RT +QVASHAQK+F+ + +K
Sbjct: 139 WTEEEHRLFLVGLQKLGKGDWRGISRNYVTSRTPTQVASHAQKYFIRHTSSSRRKRRSSL 198
Query: 166 SNFYITSLKGNSKPLLNKDNIPSPSTSWDGNFHPLLYKDNYVPAL 210
+ + +S P + + S S + K +Y+P+L
Sbjct: 199 FDMVTDEMVTDSSPTQEEQTLNGSSPSKEPE------KKSYLPSL 237
>At1g19000 unknown protein
Length = 285
Score = 62.8 bits (151), Expect = 1e-10
Identities = 37/93 (39%), Positives = 57/93 (60%), Gaps = 12/93 (12%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKR 165
WTE EH+ FL G++ GKG WK IS++ V++RT +QVASHAQK+FL + T+ ++R
Sbjct: 104 WTENEHKRFLIGLQKVGKGDWKGISRNFVKSRTPTQVASHAQKYFLRR---TNLNRRRRR 160
Query: 166 SNFY------ITSLKGNSKPLLNKDNIPSPSTS 192
S+ + +T + P ++N P P T+
Sbjct: 161 SSLFDITTETVTEMAMEQDP--TQENSPLPETN 191
>At5g61620 transcriptional activator - like protein
Length = 317
Score = 60.8 bits (146), Expect = 5e-10
Identities = 36/82 (43%), Positives = 53/82 (63%), Gaps = 4/82 (4%)
Query: 105 KHWTEEEHRLFLEGIEIHGKGKWKLISQ-HVRTRTASQVASHAQKHFLHQLDGTSKKTYK 163
K WTEEEHR FL G+ GKG W+ I++ V TRT +QVASHAQK+F+ +L+ K+ K
Sbjct: 108 KPWTEEEHRNFLIGLNKLGKGDWRGIAKSFVSTRTPTQVASHAQKYFI-RLNVNDKR--K 164
Query: 164 KRSNFYITSLKGNSKPLLNKDN 185
+R++ + SL+ + N +
Sbjct: 165 RRASLFDISLEDQKEKERNSQD 186
>At5g56840 putative protein
Length = 233
Score = 58.9 bits (141), Expect = 2e-09
Identities = 33/71 (46%), Positives = 47/71 (65%), Gaps = 3/71 (4%)
Query: 107 WTEEEHRLFLEGIEIHGKGKWKLISQH-VRTRTASQVASHAQKHFLHQLDGTSKKTYKKR 165
WT EEHR FL G+E GKG W+ IS++ V T++ +QVASHAQK+FL Q T+ ++R
Sbjct: 93 WTAEEHRTFLIGLEKLGKGDWRGISRNFVVTKSPTQVASHAQKYFLRQT--TTLHHKRRR 150
Query: 166 SNFYITSLKGN 176
++ + GN
Sbjct: 151 TSLFDMVSAGN 161
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.312 0.131 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,640,653
Number of Sequences: 26719
Number of extensions: 250478
Number of successful extensions: 801
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 33
Number of HSP's that attempted gapping in prelim test: 628
Number of HSP's gapped (non-prelim): 158
length of query: 216
length of database: 11,318,596
effective HSP length: 95
effective length of query: 121
effective length of database: 8,780,291
effective search space: 1062415211
effective search space used: 1062415211
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 58 (26.9 bits)
Medicago: description of AC146842.1