BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146819.5 + phase: 0 /partial
(599 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20310 unknown protein 105 9e-23
At4g28690 unknown protein 97 2e-20
At5g54155 putative protein 60 5e-09
At4g27660 hypothetical protein 45 9e-05
At3g09000 unknown protein 35 0.091
At1g15780 unknown protein 35 0.12
At2g39430 putative disease resistance response protein 34 0.20
At5g20730 auxin response factor 7 (ARF7) 34 0.27
At4g04885 unknown protein 33 0.59
At1g42500 hypothetical protein 33 0.59
At3g30780 hypothetical protein 32 1.0
At2g22840 unknown protein 32 1.0
At5g55030 putative protein 32 1.3
At1g59660 nucleoporin 98-like protein 32 1.3
At5g65160 unknown protein 31 1.7
At3g55230 disease resistance response/ dirigent - like protein 31 1.7
At3g30580 hypothetical protein 31 1.7
At5g02950 unknown protein 31 2.2
At2g44950 unknown protein 31 2.2
At1g30650 putative DNA-binding protein 31 2.2
>At2g20310 unknown protein
Length = 430
Score = 105 bits (261), Expect = 9e-23
Identities = 69/239 (28%), Positives = 108/239 (44%), Gaps = 26/239 (10%)
Query: 1 IACRDYPHSRHLCGNFPYSSTPHERHCGQCHCYVCDSPAPCLKWGDGLLNTDHCHATDKS 60
IACRD+PH RH C + ++ST HE++C CHCYVCD APC W + + DHCHA DK
Sbjct: 111 IACRDFPHPRHSCAKYAFNSTSHEKYCDMCHCYVCDIRAPCPYWCIAVSSIDHCHANDKE 170
Query: 61 DIWKTLRQDSLSASTKSGNVVNSQPNHMLPLETARLSPNSVLVNHTSRSTALLPLSA--- 117
IWK R+ + + P+ + + L N V + S ST + S+
Sbjct: 171 KIWKNQREYFRTGYMPTAPSSKPTPSILRVPKNTLLRKNHVEIRPCSSSTRVANPSSVKA 230
Query: 118 -----NLIPQNQAYWNACSSLSSRLQNQVSRSTETHPHSVNLIPQNQAYLPIAMNARSSL 172
IP NQ LQ+Q ++S T SV ++ + SS
Sbjct: 231 RHRIRQPIPHNQG-----------LQSQPAQSLSTVRDSVIQKDRSSYRFSLRSRVASSA 279
Query: 173 GSGLQL-----QVSRSA--ETHPLSVNLMPQNQASRQITMNAYSSLGSGLQNQASRSTE 224
G+G+ + QVS+S+ + ++ L P+ ++ + ++L N +R +
Sbjct: 280 GNGISIRFNNAQVSQSSHHSSSTVAPTLNPETYTQQRNVRDHCTALPGSQSNVFTRHAD 338
>At4g28690 unknown protein
Length = 419
Score = 97.4 bits (241), Expect = 2e-20
Identities = 37/69 (53%), Positives = 45/69 (64%), Gaps = 1/69 (1%)
Query: 1 IACRDYPHSRHLCGNFPYSSTPHERHCGQCHCYVCDSPAPCLKW-GDGLLNTDHCHATDK 59
+ACRD+PH RH C +P+ ST H+ C CHCYVCD+ APC W G+ NTDHCHA DK
Sbjct: 61 VACRDFPHPRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISNTDHCHANDK 120
Query: 60 SDIWKTLRQ 68
W R+
Sbjct: 121 EKTWNDQRE 129
>At5g54155 putative protein
Length = 136
Score = 59.7 bits (143), Expect = 5e-09
Identities = 28/60 (46%), Positives = 34/60 (56%), Gaps = 13/60 (21%)
Query: 1 IACRDYPHSRHLCGNFPYSSTPHERHCGQCHCYVCDSPAPCLKWGDGLLNTDHCHATDKS 60
+ACRDYPH RHLC NFP+ ST + H CD PAPC W + HC+A+ S
Sbjct: 73 VACRDYPHPRHLCLNFPFGSTSNATH--------CDLPAPCALW-----MSSHCNASADS 119
>At4g27660 hypothetical protein
Length = 208
Score = 45.4 bits (106), Expect = 9e-05
Identities = 22/46 (47%), Positives = 27/46 (57%), Gaps = 4/46 (8%)
Query: 23 HERHCGQCHCYVCDSPAPCLKWGDGLLNTDHCHATDKSDIWKTLRQ 68
HE+ GQC+CYVCD APC W T HC A + S WK +R+
Sbjct: 96 HEK--GQCYCYVCDVVAPCAYW-TASFATPHCEALENSK-WKPIRK 137
>At3g09000 unknown protein
Length = 541
Score = 35.4 bits (80), Expect = 0.091
Identities = 65/305 (21%), Positives = 105/305 (34%), Gaps = 32/305 (10%)
Query: 128 NACSSLSSRLQNQVSRSTETHPHSVNLIPQNQAYLPIAMNARSSLGSGLQLQVSRSAETH 187
+A +S + L++++ E N PQ + + SS GS S S
Sbjct: 106 DAPNSRPTVLKSRLGNCREDIVSGNNNKPQTSSSSVAGLRRPSSSGSSR----STSRPAT 161
Query: 188 PLSVNLMPQNQASRQITMNAYSSLGSGLQNQASRSTETHPHSVNLMPQNQVSRQITMNAC 247
P + P SR +T A +S S ++A+ + S S +A
Sbjct: 162 PTRRSTTPTTSTSRPVTTRASNSRSSTPTSRATLTAARATTSTAAPRTTTTSSGSARSAT 221
Query: 248 SSLGSGLQNQAS-RSTATHPHSVNLMPQNQVSRQITMNACSSLGSG-------LQNQASR 299
+ + + AS + + P + P I + S G+ L SR
Sbjct: 222 PTRSNPRPSSASSKKPVSRPATPTRRPSTPTGPSIVSSKAPSRGTSPSPTVNSLSKAPSR 281
Query: 300 STATHPQSVNLIPQNQASQP-ITINAMP-LQNYRLQNQISRPNNAPGCSTASNFTIPNGA 357
T+ P + P P ++ A P L+ +S PG ++A P
Sbjct: 282 GTSPSPTLNSSRPWKPPEMPGFSLEAPPNLRTTLADRPVSASRGRPGVASA-----PGSR 336
Query: 358 NNGICQESGPTL-----ARNRYPSNTAARMPLG--------VRNHAIQKKRGHGVGTGNP 404
+ I + GPT AR + S + R P+G VR A G G +P
Sbjct: 337 SGSIERGGGPTSGGSGNARRQSCSPSRGRAPIGNTNGSLTGVRGRAKASNGGSGCDNLSP 396
Query: 405 VTMNH 409
V M +
Sbjct: 397 VAMGN 401
>At1g15780 unknown protein
Length = 1335
Score = 35.0 bits (79), Expect = 0.12
Identities = 57/231 (24%), Positives = 85/231 (36%), Gaps = 52/231 (22%)
Query: 158 NQAYLPIAMNARSSLGSGLQLQVSRSAETHPLSVNLMPQN---QASRQITMNAYSSLGSG 214
NQ + + + S LQ + + P LM Q QA+ Q + S++
Sbjct: 393 NQQNNVMNIQQQQSQQQPLQQPQQQQKQQPPAQQQLMSQQNSLQATHQNPLGTQSNVAGL 452
Query: 215 LQNQ--------ASRSTETHPHSVNLMPQNQVSRQITMNACSSLGSGLQNQASRSTATHP 266
Q Q + S + + HSV+++ Q V Q T A G GL + + + P
Sbjct: 453 QQPQQQMLNSQVGNSSLQNNQHSVHMLSQPTVGLQRTHQA----GHGLYSSQGQQSQNQP 508
Query: 267 HSVNLMPQNQVSRQITMNACSSLGSGLQNQASRSTATHPQSVNLIPQN-----QASQPIT 321
+MPQ Q Q GLQ Q NL+ Q+ QAS +T
Sbjct: 509 SQQQMMPQLQSHHQ---------QLGLQQQP-----------NLLQQDVQQRLQASGQVT 548
Query: 322 INAMPLQN--------YRLQNQISRPNNAPGCSTASNFTIPNGANNGICQE 364
+ +P QN Y+ Q + ++ STA AN G QE
Sbjct: 549 GSLLPPQNVVDQQRQLYQSQRTLPEMPSSSLDSTAQT----ESANGGDWQE 595
Score = 30.4 bits (67), Expect = 2.9
Identities = 47/207 (22%), Positives = 73/207 (34%), Gaps = 34/207 (16%)
Query: 151 SVNLIPQNQAYLPIAMNARSSLGSGLQLQVSRSAETHPLSVNLMPQNQASRQITMNAYSS 210
S++ IP NQ L L ++S PL M N AS A S
Sbjct: 111 SIDSIPTNQGQLLPG-----------SLSTNQSQAPQPLLSQTMQNNTASGMTGSTALPS 159
Query: 211 LGSGLQNQASRSTETHPHSVNLMPQNQVSRQITMNACSSLGSGLQNQASRSTATHPHSVN 270
+ + + +T T + N QN + L S + + R PH+++
Sbjct: 160 SMPPVSSITNNNT-TSVVNQNANMQNVAGMLQDSSGQHGLSSNMFSGPQRQMLGRPHAMS 218
Query: 271 -------LMPQNQVSRQITM---------NACSSLGSGLQNQASRSTATHPQSVNLIPQ- 313
+ Q Q+ +Q+ N S L S +Q Q + P ++ Q
Sbjct: 219 SQQQQQPYLYQQQLQQQLLKQNFQSGNVPNPNSLLPSHIQQQ--QQNVLQPNQLHSSQQP 276
Query: 314 ---NQASQPITINAMPLQNYRLQNQIS 337
A+QP T+N+ PLQ Q S
Sbjct: 277 GVPTSATQPSTVNSAPLQGLHTNQQSS 303
>At2g39430 putative disease resistance response protein
Length = 322
Score = 34.3 bits (77), Expect = 0.20
Identities = 28/83 (33%), Positives = 35/83 (41%), Gaps = 9/83 (10%)
Query: 308 VNLIPQNQASQPI--TINAMPLQNYRLQNQISRPNNAP---GCSTASNFTIPNGANNGIC 362
VN IP ++AS I N +PL N N + PN AP G A T+ N
Sbjct: 114 VNGIPFSKASNSIFPVDNGVPLVNSNNINSVINPNTAPLLTGLGGAQTSTVIQNTNG--- 170
Query: 363 QESGPTLARNRYPSNTAARMPLG 385
S L+ N P TA +P G
Sbjct: 171 -NSNDALSANSLPFVTAGNLPPG 192
>At5g20730 auxin response factor 7 (ARF7)
Length = 1164
Score = 33.9 bits (76), Expect = 0.27
Identities = 52/214 (24%), Positives = 75/214 (34%), Gaps = 36/214 (16%)
Query: 133 LSSRLQNQVSRS----TETHPHSVNLIPQNQAYLPIAMNARSSLGSGLQLQVSRSAETHP 188
L + Q Q R+ + +HP L L + N + Q S+ A TH
Sbjct: 574 LQQQTQQQQLRTQPLQSHSHPQPQQLQQHKLQQLQVPQNQLYNGQQAAQQHQSQQASTHH 633
Query: 189 LSVNLMPQNQASRQITMNAYSSLGSGLQNQASRS---TETHPHSVNLMPQNQVSRQITMN 245
L L+ + AS IT + SSL Q Q +S + H H +
Sbjct: 634 LQPQLVSGSMASSVITPPS-SSLNQSFQQQQQQSKQLQQAHHH---------------LG 677
Query: 246 ACSSLGSGLQNQASRSTATHPHSVNLM----PQNQVSRQITMNACSSLGSGLQNQASRST 301
A +S S ++ S S NLM + Q SRQ+ L Q +
Sbjct: 678 ASTSQSSVIETSKSSS--------NLMSAPPQETQFSRQVEQQQPPGLNGQNQQTLLQQK 729
Query: 302 ATHPQSVNLIPQNQASQPITINAMPLQNYRLQNQ 335
A Q+ + Q+ QP I LQ + Q Q
Sbjct: 730 AHQAQAQQIFQQSLLEQP-HIQFQLLQRLQQQQQ 762
>At4g04885 unknown protein
Length = 808
Score = 32.7 bits (73), Expect = 0.59
Identities = 35/123 (28%), Positives = 52/123 (41%), Gaps = 23/123 (18%)
Query: 128 NACSSLSSRLQ--------NQVSRS-----TETHPHSVNLIPQNQAYLPIAMNARSSL-- 172
N +++S+RLQ NQVS+S T+ + VN +P + A P M + +
Sbjct: 497 NPGNAMSNRLQGKPLYRPENQVSQSHLNDMTQQNQMLVNYLPSSSAMAPRPMQSLLTHVS 556
Query: 173 ------GSGLQ--LQVSRSAETHPLSVNLMPQNQASRQITMNAYSSLGSGLQNQASRSTE 224
GS ++ L + HPLS ++ Q AS Q A+S L L Q S
Sbjct: 557 HGYPPHGSTIRPSLSIQGGEAMHPLSSGVLSQIGASNQPPGGAFSGLIGSLMAQGLISLN 616
Query: 225 THP 227
P
Sbjct: 617 NQP 619
>At1g42500 hypothetical protein
Length = 451
Score = 32.7 bits (73), Expect = 0.59
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Query: 333 QNQISRPNNAPGCSTASNFTIPNGANNGICQESGPTLARNRYPSNTAARMPLGVRNH 389
QNQ P+ G +T N P +NN S P + N+ P+ +A + P G NH
Sbjct: 16 QNQRRSPSEGNGSATQGNLQTPINSNNQANGASPPPV--NQSPTGSANQSPRGSANH 70
>At3g30780 hypothetical protein
Length = 438
Score = 32.0 bits (71), Expect = 1.0
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 2/57 (3%)
Query: 333 QNQISRPNNAPGCSTASNFTIPNGANNGICQESGPTLARNRYPSNTAARMPLGVRNH 389
QNQ P+ G +T N P +NN S P + N+ P +A + P G NH
Sbjct: 16 QNQRRSPSEGNGSATQGNLQTPINSNNQANGASPPLV--NQSPRGSANQSPPGFANH 70
>At2g22840 unknown protein
Length = 530
Score = 32.0 bits (71), Expect = 1.0
Identities = 65/301 (21%), Positives = 114/301 (37%), Gaps = 42/301 (13%)
Query: 190 SVNLMPQNQASRQITMNAYSSLGSGLQNQASRSTETHPH-SVNLMPQNQVSRQITMNACS 248
+ N A+ T A S +G A R ++ + + + Q+ + Q T
Sbjct: 245 NTNAAAAASAAAASTAAAVSKAAAGTSAVAMRGSDNNNSLAAAVGTQHHTNNQST----D 300
Query: 249 SLGSGLQNQASRSTATHPHSVNLMPQNQVSRQIT------MNACSSLGSGLQNQASRSTA 302
SL + +QN SR + P ++NL + +Q + + SL + QAS +T+
Sbjct: 301 SLANRVQN--SRGASVFPATMNLQSKETHPKQSNNPFEFGLISSDSLLNPSHKQASYATS 358
Query: 303 THPQSVNLIPQNQASQPITINAMPLQNYRLQNQISRPNNAPGCSTASNFTIPNGANNGIC 362
+ L NQA N N S P T + +IP ++ +
Sbjct: 359 SKGFGSYLDFGNQAKHAGNHN----------NVDSWPEELKSDWTQLSMSIPMAPSSPVQ 408
Query: 363 QESGPTLARNRYPSNTAARMPLGVR----------NHAIQKKRGHGVGTGNPVTMNHVTA 412
+ + R + A M LGV N+ I G+ G P+ +
Sbjct: 409 DKLALSPLRLSREFDPAIHMGLGVNTEFLDPGKKTNNWIPISWGNNNSMGGPLGEVLNST 468
Query: 413 PGAPGFSNHIN-----TQYSDRSNAAAAT----GFSNSRNGYGQDGIRITNAINPLLTQP 463
+P F + + + SN+++A+ G +N++NG G+D + T +N T P
Sbjct: 469 TNSPKFGSSPTGVLQKSTFGSLSNSSSASSTIIGDNNNKNGDGKDPLGPTTLMNTSATAP 528
Query: 464 S 464
S
Sbjct: 529 S 529
>At5g55030 putative protein
Length = 639
Score = 31.6 bits (70), Expect = 1.3
Identities = 46/211 (21%), Positives = 85/211 (39%), Gaps = 24/211 (11%)
Query: 273 PQNQVSRQITMNAC-----SSLGSG--LQNQASRSTATHPQSVNLIPQNQASQPITINAM 325
PQN++ +Q+ +N ++ GSG L+NQ+ + T + ++S + N
Sbjct: 309 PQNRIPQQVELNLPPPAEQTNSGSGCVLENQSFGKSDT-------VASYRSSSDMMRNMS 361
Query: 326 PLQNYRLQNQISRPNNAPGCSTASNFTIPNGANNGICQESGPTLARNRYPSNTAARMPLG 385
+ ++Q++ PG N + G NN + S A + T+++ P+
Sbjct: 362 STDSEHYKHQMTTNGIFPG--GLRNGKVSPGVNNRMFDLS-TDFANQMSRTATSSQQPMR 418
Query: 386 VRNHA------IQKKRGHGVGTGNPVTMNHVTAPGAPGFSNHINTQYSDRSNAAAATGFS 439
++ + I + T + T NH A P S+ + + D NA+ A +
Sbjct: 419 QQSQSHEEQAQIMRNFNERARTQHNSTYNHPKADAPPKISSPQSARSEDSGNASVAAARA 478
Query: 440 NSRNGYGQDGIR-ITNAINPLLTQPSHSLAY 469
G G + + NA NP +Q S Y
Sbjct: 479 WMSIGAGGNNKQTFENASNPKSSQISAESLY 509
>At1g59660 nucleoporin 98-like protein
Length = 997
Score = 31.6 bits (70), Expect = 1.3
Identities = 33/158 (20%), Positives = 58/158 (35%), Gaps = 15/158 (9%)
Query: 415 APGFSNHINTQYSDRSNAAAATGFSNSRNGYGQDGIRITNAINPLLTQPSHSLAYETQPS 474
+P FS + + + + SN+ + +G TN +QP S + + P+
Sbjct: 440 SPSFSQPTTPSFGQPTTPSFRSTVSNTTSVFGSSSSLTTNT-----SQPLGSSIFGSTPA 494
Query: 475 YQSNSIQNLYGYNNFQGDESLSSYVARLNTNRYLNEHQIGSQNENIINSGAT-----VQD 529
+ S ++ G+NN Q S N + N SQ + T
Sbjct: 495 HGSTPGFSIGGFNNSQSSPLFGS-----NPSFAQNTTPAFSQTSPLFGQNTTPALGQSSS 549
Query: 530 VFQQNPHGGIQNEGFLARDSSGAENTNQNISYVQNLVS 567
VF QN + + + S+G NT + S + +S
Sbjct: 550 VFGQNTNPALVQSNTFSTPSTGFGNTFSSSSSLTTSIS 587
Score = 30.4 bits (67), Expect = 2.9
Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 15/151 (9%)
Query: 440 NSRNGYGQDGIRITNAINPLLTQPSH-SLAYETQPSYQSNSIQNLYGYNNFQGDESLSSY 498
N N + Q +P +QP+ S T PS++S ++ N F SL++
Sbjct: 423 NPTNPFSQTTPTSNTNFSPSFSQPTTPSFGQPTTPSFRS-TVSNTTSV--FGSSSSLTT- 478
Query: 499 VARLNTNRYLNEHQIGSQNENIINSGATVQDVFQQNPHGGIQNEGFLARDSSGAENTNQN 558
NT++ L GS + G F Q+ + S A+NT
Sbjct: 479 ----NTSQPLGSSIFGSTPAHGSTPG------FSIGGFNNSQSSPLFGSNPSFAQNTTPA 528
Query: 559 ISYVQNLVSQNISQNANESSTPFNGNTQLSL 589
S L QN + +SS+ F NT +L
Sbjct: 529 FSQTSPLFGQNTTPALGQSSSVFGQNTNPAL 559
>At5g65160 unknown protein
Length = 593
Score = 31.2 bits (69), Expect = 1.7
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 16/89 (17%)
Query: 427 SDRSNAAAATGFSNSRNGYGQDGIRITNAINPLLTQPSHSLAYETQPSYQSNSIQNLYGY 486
S +S + AAT SN I+ T + L +P +P Q+N IQN +
Sbjct: 40 SQKSTSTAATATSN---------IQFTKSPGTELKKPRDDQKVSAEP-IQNNKIQNNQNH 89
Query: 487 NNFQGDESLSSYVARLNTNRYLNEHQIGS 515
N S ++ ++N+Y N HQ+G+
Sbjct: 90 NQ------RSVVPSKPSSNQYPNNHQLGT 112
>At3g55230 disease resistance response/ dirigent - like protein
Length = 306
Score = 31.2 bits (69), Expect = 1.7
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 308 VNLIPQNQASQPI--TINAMPLQNYRLQNQISRPNNAP---GCSTASNFTIPNGANNGIC 362
VN IP +++S I NA+PL N N + PN AP G S + T+ +N
Sbjct: 97 VNGIPFSKSSNNIFPVDNAVPLVNANSINNLINPNTAPLLTGLSGSQANTVIQNSNG--- 153
Query: 363 QESGPTLARNRYPSNTAARMP 383
S +L+ N P T ++P
Sbjct: 154 -NSQGSLSSNNLPFVTTGQLP 173
>At3g30580 hypothetical protein
Length = 128
Score = 31.2 bits (69), Expect = 1.7
Identities = 19/89 (21%), Positives = 42/89 (46%), Gaps = 10/89 (11%)
Query: 498 YVARLNTNRYLNEHQIGSQNENIINSGATVQDVFQQNPHGGIQNEGFLARDSSGAEN--- 554
++ + +Y NE++I +++ + S A+ + Q + G + EG R+ G N
Sbjct: 37 HIIEKDRRKYANEYEINKDSDDSMASDASSGPSYHQTSNRGKRREGLALRNGKGESNDVY 96
Query: 555 ----TNQNISYVQNLVSQNISQNANESST 579
++NI NL+S+ + +E+ +
Sbjct: 97 SHRIDDKNIG---NLISRKKEKKKSENKS 122
>At5g02950 unknown protein
Length = 632
Score = 30.8 bits (68), Expect = 2.2
Identities = 21/75 (28%), Positives = 35/75 (46%), Gaps = 5/75 (6%)
Query: 54 CHAT----DKSDIWKTLRQDSLSASTKSGNVVNSQPNHMLPLETARLSPNSVLVN-HTSR 108
CH T + + + TL+ S ST+ N +P H E SP+ +L + H +
Sbjct: 402 CHGTGVENEMNSLTPTLKPCRASKSTEVENEKTKKPRHQELAERKISSPDEMLSSLHAAN 461
Query: 109 STALLPLSANLIPQN 123
++ +P S N+ P N
Sbjct: 462 TSTGIPDSINIDPSN 476
>At2g44950 unknown protein
Length = 518
Score = 30.8 bits (68), Expect = 2.2
Identities = 20/68 (29%), Positives = 31/68 (45%)
Query: 120 IPQNQAYWNACSSLSSRLQNQVSRSTETHPHSVNLIPQNQAYLPIAMNARSSLGSGLQLQ 179
I Q AY + S SSR+++Q+ T+ Q L R+ +G+GL+
Sbjct: 332 IQQGSAYASFLSKKSSRIEDQLRFCTDQFQKLAEDKYQKSVSLENLQKKRADIGNGLEQA 391
Query: 180 VSRSAETH 187
SR E+H
Sbjct: 392 RSRLEESH 399
>At1g30650 putative DNA-binding protein
Length = 430
Score = 30.8 bits (68), Expect = 2.2
Identities = 21/84 (25%), Positives = 38/84 (45%), Gaps = 5/84 (5%)
Query: 91 LETARLSPNSVLVNHTSRSTALLPLSANLIPQNQAYWNACSSLSSRLQNQVSRSTETHPH 150
+E +R PN +++ +TS P+ N + + SS SS S+ + + +
Sbjct: 254 VERSRTDPNMLVITYTSEHNHPWPIQRNALAGSTR-----SSTSSSSNPNPSKPSTANVN 308
Query: 151 SVNLIPQNQAYLPIAMNARSSLGS 174
S ++ QN YLP + +L S
Sbjct: 309 SSSIGSQNTIYLPSSTTPPPTLSS 332
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.311 0.125 0.364
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,102,931
Number of Sequences: 26719
Number of extensions: 557128
Number of successful extensions: 1458
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 1431
Number of HSP's gapped (non-prelim): 54
length of query: 599
length of database: 11,318,596
effective HSP length: 105
effective length of query: 494
effective length of database: 8,513,101
effective search space: 4205471894
effective search space used: 4205471894
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 63 (28.9 bits)
Medicago: description of AC146819.5