BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146819.12 + phase: 0 /pseudo
(1226 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g15520 hypothetical protein 211 3e-54
At3g16340 putative ABC transporter 179 1e-44
At2g36380 putative ABC transporter 174 3e-43
At1g59870 putative ABC transporter (At1g59870) 173 5e-43
At1g66950 ABC transporter, putative 170 4e-42
At1g15210 putative ABC transporter 168 2e-41
At2g26910 putative ABC transporter 167 3e-41
At3g53480 ABC transporter - like protein 162 1e-39
At2g37280 putative ABC transporter 158 2e-38
At2g29940 putative ABC transporter 148 2e-35
At4g15220 ABC transporter homolog 129 1e-29
At3g25620 membrane transporter, putative 52 3e-06
At1g31770 unknown protein 48 4e-05
At4g27420 putative protein 47 5e-05
At1g17840 putative ABC transporter (At1g17840) 44 4e-04
At2g28070 putative ABC transporter 43 0.001
At1g51460 ATP-dependent transmembrane transporter like protein 43 0.001
At1g53270 putative ABC transporter emb|AAD22683.1 43 0.001
At1g53390 putative ABC transporter gb|AAD31586.1 42 0.003
At3g13220 ABC transporter 40 0.011
>At1g15520 hypothetical protein
Length = 1423
Score = 211 bits (536), Expect = 3e-54
Identities = 111/236 (47%), Positives = 155/236 (65%), Gaps = 22/236 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPE--GDSNEIDVHKIGLQERTYLLQRLLRNN 59
E D+ ++W ++++LPT RLR+G+LT G NEID+ K+G Q+ LL+RL++
Sbjct: 35 EEDDEEALRWAALEKLPTFDRLRKGILTASHAGGPINEIDIQKLGFQDTKKLLERLIKVG 94
Query: 60 TVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLV 119
D++H LL ++ RIDR G+D+PTIEVRF+HL V+A+VHVG RAL T N++ +
Sbjct: 95 ----DDEHEKLLWKLKKRIDRVGIDLPTIEVRFDHLKVEAEVHVGGRALPTFVNFISNFA 150
Query: 120 E------YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKI 173
+ +++ RK++ IL DVSGI+K R+ LLLGPP+SGKT LLLALAGKLD LK
Sbjct: 151 DKFLNTLHLVPNRKKKFTILNDVSGIVKPGRMALLLGPPSSGKTTLLLALAGKLDQELK- 209
Query: 174 ANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLGN*LSEKPWPFQQEFK 229
G+V+YNGH MNEFVPQRTAAY+ QND H+G + + + F+
Sbjct: 210 ---------QTGRVTYNGHGMNEFVPQRTAAYIGQNDVHIGEMTVRETFAYAARFQ 256
Score = 39.7 bits (91), Expect = 0.011
Identities = 27/101 (26%), Positives = 50/101 (48%), Gaps = 13/101 (12%)
Query: 114 YMLDLVEYILKRRKQQ--LNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
Y +D+ + ++++ Q+ L +L+ V+G + LT L+G +GKT L+ LAG+
Sbjct: 832 YSVDMPQEMIEQGTQEDRLVLLKGVNGAFRPGVLTALMGVSGAGKTTLMDVLAGR----- 886
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K + G ++ +G+ N+ R + Y Q D H
Sbjct: 887 KTGGYID------GNITISGYPKNQQTFARISGYCEQTDIH 921
>At3g16340 putative ABC transporter
Length = 1416
Score = 179 bits (453), Expect = 1e-44
Identities = 97/212 (45%), Positives = 141/212 (65%), Gaps = 23/212 (10%)
Query: 9 MKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTVEVDNDHS 68
+KW ++++LPT ARLR ++ E + +DV K+G+ +R + + + E DN+
Sbjct: 40 LKWAALEKLPTFARLRTTIIHPHE---DLVDVTKLGVDDRQKFIDSIFK--VTEEDNEK- 93
Query: 69 FLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVEYILK---- 124
LK R+RIDR + +PT+EVRFE + ++A H+GKRAL T+ N L++ E L+
Sbjct: 94 -FLKKFRNRIDRVRIKLPTVEVRFEKVTIEANCHIGKRALPTLPNAALNIAERGLRLLGF 152
Query: 125 --RRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQ 182
+ ++ IL+DVSGI+K SR+TLLLGPP+SGKT LLLALAGKLD +LK+
Sbjct: 153 NFTKTTKVTILRDVSGIIKPSRMTLLLGPPSSGKTTLLLALAGKLDQSLKV--------- 203
Query: 183 FAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
G+V+YNGH + EFVPQ+T+AY+SQND H+G
Sbjct: 204 -TGRVTYNGHGLEEFVPQKTSAYISQNDVHVG 234
Score = 42.7 bits (99), Expect = 0.001
Identities = 28/102 (27%), Positives = 51/102 (49%), Gaps = 13/102 (12%)
Query: 113 NYMLDLVEYILKR--RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPN 170
NY +D+ + + ++ K +L +L++V+G+ + LT L+G +GKT L+ LAG+
Sbjct: 820 NYYVDMPKEMKEQGVSKDKLQLLKEVTGVFRPGVLTALMGVSGAGKTTLMDVLAGR---- 875
Query: 171 LKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K ++ G + +G + R + Y QND H
Sbjct: 876 -KTGGYIE------GDIRISGFPKRQETFARISGYCEQNDIH 910
>At2g36380 putative ABC transporter
Length = 1450
Score = 174 bits (441), Expect = 3e-43
Identities = 95/223 (42%), Positives = 146/223 (64%), Gaps = 25/223 (11%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLL--TTPEGDSN--EIDVHKIGLQERTYLLQRLLR 57
E D++ L +W +++RLPT RLR+G+L T G ++DV + +E+ +L++ +L+
Sbjct: 53 EEDDVEL-RWAALERLPTYDRLRKGMLPQTMVNGKIGLEDVDVTNLAPKEKKHLMEMILK 111
Query: 58 NNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLD 117
V+ D+ L+ +R+R DR G+++P IEVR+E+L+V+ V RAL T+ N L+
Sbjct: 112 F----VEEDNEKFLRRLRERTDRVGIEVPKIEVRYENLSVEGDVRSASRALPTLFNVTLN 167
Query: 118 LVE------YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
+E ++L +K+++ IL+D+SGI+K SR+TLLLGPP+SGKT LL ALAGKLD L
Sbjct: 168 TIESILGLFHLLPSKKRKIEILKDISGIIKPSRMTLLLGPPSSGKTTLLQALAGKLDDTL 227
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
Q +G+++Y GHE EFVPQ+T AY+SQ+D H G
Sbjct: 228 ----------QMSGRITYCGHEFREFVPQKTCAYISQHDLHFG 260
Score = 43.9 bits (102), Expect = 6e-04
Identities = 27/84 (32%), Positives = 42/84 (49%), Gaps = 11/84 (13%)
Query: 129 QLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVS 188
+L +L+DV G + LT L+G +GKT L+ LAG+ K V+ G ++
Sbjct: 873 RLQLLRDVGGAFRPGVLTALVGVSGAGKTTLMDVLAGR-----KTGGYVE------GSIN 921
Query: 189 YNGHEMNEFVPQRTAAYVSQNDTH 212
+G+ N+ R + Y QND H
Sbjct: 922 ISGYPKNQATFARVSGYCEQNDIH 945
>At1g59870 putative ABC transporter (At1g59870)
Length = 1469
Score = 173 bits (439), Expect = 5e-43
Identities = 94/226 (41%), Positives = 145/226 (63%), Gaps = 28/226 (12%)
Query: 3 SDEISLMKWDSIQRLPTVARLRRGLLTTPEGD--------SNEIDVHKIGLQERTYLLQR 54
+D+ +KW +I++LPT +RLR L+ D S E+DV K+ ++R +
Sbjct: 47 NDDEEALKWAAIEKLPTYSRLRTTLMNAVVEDDVYGNQLMSKEVDVTKLDGEDRQKFIDM 106
Query: 55 LLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNY 114
+ + E DN+ +L +R+RIDR G+ +PT+EVR+EHL ++A + G R+L T+ N
Sbjct: 107 VFK--VAEQDNER--ILTKLRNRIDRVGIKLPTVEVRYEHLTIKADCYTGNRSLPTLLNV 162
Query: 115 MLDLVEYILKR------RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLD 168
+ ++ E L +K QL IL+D+SG++K R+TLLLGPP+SGKT LLLALAGKLD
Sbjct: 163 VRNMGESALGMIGIQFAKKAQLTILKDISGVIKPGRMTLLLGPPSSGKTTLLLALAGKLD 222
Query: 169 PNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+L Q +G ++YNG++++EFVP++T+AY+SQND H+G
Sbjct: 223 KSL----------QVSGDITYNGYQLDEFVPRKTSAYISQNDLHVG 258
Score = 33.1 bits (74), Expect = 1.0
Identities = 24/84 (28%), Positives = 38/84 (44%), Gaps = 11/84 (13%)
Query: 129 QLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVS 188
+L +L+ V+G + LT L+G +GKT L+ LAG+ K ++ G V
Sbjct: 891 RLQLLKGVTGAFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------GDVR 939
Query: 189 YNGHEMNEFVPQRTAAYVSQNDTH 212
+G + R + Y Q D H
Sbjct: 940 ISGFPKVQETFARISGYCEQTDIH 963
>At1g66950 ABC transporter, putative
Length = 1434
Score = 170 bits (431), Expect = 4e-42
Identities = 95/223 (42%), Positives = 150/223 (66%), Gaps = 25/223 (11%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLL--TTPEG--DSNEIDVHKIGLQERTYLLQRLLR 57
E D++ L +W +I+RLPT RLR+G+L T+ G + +ID+ ++ +++ +L++ +L
Sbjct: 55 EEDDMEL-RWAAIERLPTFDRLRKGMLPQTSANGKIELEDIDLTRLEPKDKKHLMEMIL- 112
Query: 58 NNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLD 117
+ VE DN+ L+ +R+R DR G+++P IEVR+E+++V+ V RAL T+ N L+
Sbjct: 113 -SFVEEDNEK--FLRDLRERTDRVGIEVPKIEVRYENISVEGDVRSASRALPTLFNVTLN 169
Query: 118 LVE------YILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
+E ++L +++++ IL+D+SGI+K SR+TLLLGPP+SGKT LL ALAGKLD L
Sbjct: 170 TLESILGFFHLLPSKRKKIQILKDISGIVKPSRMTLLLGPPSSGKTTLLQALAGKLDDTL 229
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
Q +G+++Y GHE EFVPQ+T AY+SQ+D H G
Sbjct: 230 ----------QMSGRITYCGHEFREFVPQKTCAYISQHDLHFG 262
Score = 45.1 bits (105), Expect = 3e-04
Identities = 30/102 (29%), Positives = 50/102 (48%), Gaps = 13/102 (12%)
Query: 113 NYMLDLVEYILKRRKQ--QLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPN 170
NY +D+ + + + +L +L+DV G + LT L+G +GKT L+ LAG+
Sbjct: 839 NYYVDMPSEMKAQGVEGDRLQLLRDVGGAFRPGILTALVGVSGAGKTTLMDVLAGR---- 894
Query: 171 LKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K ++ G +S +G+ N+ R + Y QND H
Sbjct: 895 -KTGGYIE------GSISISGYPKNQTTFARVSGYCEQNDIH 929
>At1g15210 putative ABC transporter
Length = 1442
Score = 168 bits (426), Expect = 2e-41
Identities = 96/226 (42%), Positives = 143/226 (62%), Gaps = 28/226 (12%)
Query: 3 SDEISLMKWDSIQRLPTVARLRRGLLTTPEGD--------SNEIDVHKIGLQERTYLLQR 54
+++ +KW SI++LPT RLR L+ D + +DV K+ +ER +
Sbjct: 45 NEDEEALKWASIEKLPTYNRLRTSLMPELGEDDVYGNQILNKAVDVTKLDGEERQKFIDM 104
Query: 55 LLRNNTVEVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNY 114
+ + E DN+ +L +R+RIDR G+ +PT+EVR++HL V+A + G R+L ++ N
Sbjct: 105 VFK--VAEQDNER--ILTKLRNRIDRVGIQLPTVEVRYDHLTVKADCYTGDRSLPSLLNA 160
Query: 115 MLDLVEYILKR------RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLD 168
+ ++ E L +K QL IL+DVSGI+K SR+TLLLGPP+SGKT LLLALAGKLD
Sbjct: 161 VRNMGEAALGMIGIRLAKKAQLTILKDVSGIVKPSRMTLLLGPPSSGKTTLLLALAGKLD 220
Query: 169 PNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+L + +G+V+YNG+ +NEFVP +T+AY+SQND H+G
Sbjct: 221 KSLDV----------SGEVTYNGYRLNEFVPIKTSAYISQNDLHVG 256
Score = 32.3 bits (72), Expect = 1.7
Identities = 23/87 (26%), Positives = 39/87 (44%), Gaps = 11/87 (12%)
Query: 126 RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAG 185
++ +L +L+ V+ + LT L+G +GKT L+ LAG+ K ++ G
Sbjct: 861 QETRLQLLKGVTSAFRPGVLTALMGVSGAGKTTLMDVLAGR-----KTGGYIE------G 909
Query: 186 KVSYNGHEMNEFVPQRTAAYVSQNDTH 212
V +G + R + Y Q D H
Sbjct: 910 DVRVSGFPKKQETFARISGYCEQTDIH 936
>At2g26910 putative ABC transporter
Length = 1420
Score = 167 bits (423), Expect = 3e-41
Identities = 90/218 (41%), Positives = 137/218 (62%), Gaps = 20/218 (9%)
Query: 2 ESDEISLMKWDSIQRLPTVARLRRGLLTTPEGDSNEIDVHKIGLQERTYLLQRLLRNNTV 61
E ++ ++W ++QRLPT +R+RRG+ G+ EI + + E+ LL RL+ +
Sbjct: 18 EIEDEEELRWAALQRLPTYSRIRRGIFRDMVGEPKEIQIGNLEASEQRLLLDRLVNS--- 74
Query: 62 EVDNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGKRALHTITNYMLDLVEY 121
V+ND +R R D + P IEVRF++L V++ VHVG RAL TI N+++++ E
Sbjct: 75 -VENDPEQFFARVRKRFDAVDLKFPKIEVRFQNLMVESFVHVGSRALPTIPNFIINMAEG 133
Query: 122 ILKR------RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIAN 175
+L+ ++ +L IL +SG+++ SRLTLLLGPP+SGKT LLLALAG+L NL
Sbjct: 134 LLRNIHVIGGKRNKLTILDGISGVIRPSRLTLLLGPPSSGKTTLLLALAGRLGTNL---- 189
Query: 176 EVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHL 213
Q +GK++YNG+++ E + RT+AYVSQ D H+
Sbjct: 190 ------QTSGKITYNGYDLKEIIAPRTSAYVSQQDWHV 221
Score = 36.6 bits (83), Expect = 0.091
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 15/103 (14%)
Query: 113 NYMLDLVEYILKRR---KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDP 169
NY +D V LK + + +L +L +++G + LT L+G +GKT L+ LAG+
Sbjct: 824 NYYVD-VPLGLKEQGILEDRLQLLVNITGAFRPGVLTALVGVSGAGKTTLMDVLAGR--- 879
Query: 170 NLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K ++ G V +G + R + Y QND H
Sbjct: 880 --KTGGTIE------GDVYISGFPKRQETFARISGYCEQNDVH 914
>At3g53480 ABC transporter - like protein
Length = 1450
Score = 162 bits (409), Expect = 1e-39
Identities = 92/216 (42%), Positives = 140/216 (64%), Gaps = 25/216 (11%)
Query: 9 MKWDSIQRLPTVARLRRGLLTTPEGDSNE-----IDVHKIGLQERTYLLQRLLRNNTVEV 63
++W I+RLPTV R+R LL + E +DV K+G ER ++++L+++ +
Sbjct: 59 LQWAEIERLPTVKRMRSTLLDDGDESMTEKGRRVVDVTKLGAVERHLMIEKLIKH----I 114
Query: 64 DNDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGK-RALHTITNYMLDLVEYI 122
+ND+ LLK +R RIDR G+++PTIEVR+E L V A+ V + +AL T+ N ++ +
Sbjct: 115 ENDNLKLLKKIRRRIDRVGMELPTIEVRYESLKVVAECEVVEGKALPTLWNTAKRVLSEL 174
Query: 123 LK-----RRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEV 177
+K + ++NI+ DV+GI+K RLTLLLGPP+ GKT LL AL+G L+ NLK
Sbjct: 175 VKLTGAKTHEAKINIINDVNGIIKPGRLTLLLGPPSCGKTTLLKALSGNLENNLKC---- 230
Query: 178 QFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHL 213
+G++SYNGH ++EFVPQ+T+AY+SQ D H+
Sbjct: 231 ------SGEISYNGHRLDEFVPQKTSAYISQYDLHI 260
Score = 38.1 bits (87), Expect = 0.031
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 21/94 (22%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGK-----LDPNLKIANEVQFYE 181
+++L +L D++G + LT L+G +GKT LL LAG+ ++ +++I+ + E
Sbjct: 872 QKKLQLLSDITGAFRPGILTALMGVSGAGKTTLLDVLAGRKTSGYIEGDIRISGFPKVQE 931
Query: 182 QFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLGN 215
FA R + Y Q D H N
Sbjct: 932 TFA----------------RVSGYCEQTDIHSPN 949
>At2g37280 putative ABC transporter
Length = 1413
Score = 158 bits (399), Expect = 2e-38
Identities = 93/215 (43%), Positives = 136/215 (63%), Gaps = 24/215 (11%)
Query: 9 MKWDSIQRLPTVARLRRGLLTT----PEGDSNEIDVHKIGLQERTYLLQRLLRNNTVEVD 64
++W IQRLPT RLR L+ E +DV K+G ER ++++L+++ ++
Sbjct: 25 LQWAEIQRLPTFKRLRSSLVDKYGEGTEKGKKVVDVTKLGAMERHLMIEKLIKH----IE 80
Query: 65 NDHSFLLKLMRDRIDRAGVDIPTIEVRFEHLNVQAQVHVGK-RALHTITNYM----LDLV 119
ND+ LLK +R R++R GV+ P+IEVR+EHL V+A V + +AL T+ N + LDL+
Sbjct: 81 NDNLKLLKKIRRRMERVGVEFPSIEVRYEHLGVEAACEVVEGKALPTLWNSLKHVFLDLL 140
Query: 120 EYI-LKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQ 178
+ ++ + + IL DVSGI+ RLTLLLGPP GKT LL AL+G L+ NLK
Sbjct: 141 KLSGVRTNEANIKILTDVSGIISPGRLTLLLGPPGCGKTTLLKALSGNLENNLKC----- 195
Query: 179 FYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHL 213
G++SYNGH +NE VPQ+T+AY+SQ+D H+
Sbjct: 196 -----YGEISYNGHGLNEVVPQKTSAYISQHDLHI 225
Score = 36.2 bits (82), Expect = 0.12
Identities = 24/91 (26%), Positives = 43/91 (46%), Gaps = 21/91 (23%)
Query: 127 KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGK-----LDPNLKIANEVQFYE 181
+++L +L +++G + LT L+G +GKT LL LAG+ ++ ++I+ ++ E
Sbjct: 835 EKKLQLLSEITGAFRPGVLTALMGISGAGKTTLLDVLAGRKTSGYIEGEIRISGFLKVQE 894
Query: 182 QFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
FA R + Y Q D H
Sbjct: 895 TFA----------------RVSGYCEQTDIH 909
>At2g29940 putative ABC transporter
Length = 1443
Score = 148 bits (374), Expect = 2e-35
Identities = 100/248 (40%), Positives = 138/248 (55%), Gaps = 50/248 (20%)
Query: 1 MESDEISLMKWDSIQRLPTV------ARLRRGLLTTPEG---DSN---EIDVHKIGLQER 48
+E DE L +W +I RLP+ A LRR T D N IDV K+ +R
Sbjct: 31 VEQDEEDL-RWAAIGRLPSQRQGTHNAILRRSQTQTQTSGYADGNVVQTIDVKKLDRADR 89
Query: 49 TYLLQRLLRNNTVEVDNDHSFLLKLMRDRIDR-----------------AGVDIPTIEVR 91
L+++ L + D D+ LL +++R+DR G+++P IEVR
Sbjct: 90 EMLVRQALATS----DQDNFKLLSAIKERLDRFVTTLRILSVSNFREKKVGMEVPKIEVR 145
Query: 92 FEHLNVQAQVHVGKRALHTITNYMLDLVEY------ILKRRKQQLNILQDVSGILKHSRL 145
FE+LN++A V G RAL T+ N D E I+K RK +LNIL+D+SGI+K R+
Sbjct: 146 FENLNIEADVQAGTRALPTLVNVSRDFFERCLSSLRIIKPRKHKLNILKDISGIIKPGRM 205
Query: 146 TLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAY 205
TLLLGPP SGK+ LLLALAGKLD +LK G ++YNG +N+F +RT+AY
Sbjct: 206 TLLLGPPGSGKSTLLLALAGKLDKSLK----------KTGNITYNGENLNKFHVKRTSAY 255
Query: 206 VSQNDTHL 213
+SQ D H+
Sbjct: 256 ISQTDNHI 263
Score = 43.9 bits (102), Expect = 6e-04
Identities = 30/102 (29%), Positives = 49/102 (47%), Gaps = 13/102 (12%)
Query: 113 NYMLDLVEYILKRR--KQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPN 170
NY +D+ + + + + +L +L +VSG+ LT L+G +GKT L+ LAG+
Sbjct: 849 NYYVDMPKEMRSQGVPETRLQLLSNVSGVFSPGVLTALVGSSGAGKTTLMDVLAGR---- 904
Query: 171 LKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTH 212
K + G + +GH + R + YV QND H
Sbjct: 905 -KTGGYTE------GDIRISGHPKEQQTFARISGYVEQNDIH 939
>At4g15220 ABC transporter homolog
Length = 290
Score = 129 bits (323), Expect = 1e-29
Identities = 83/249 (33%), Positives = 141/249 (56%), Gaps = 51/249 (20%)
Query: 1 MESDEISLMKWDSIQRLPTVARLRRGLLTTPE--GDSNEIDVHKIGLQERTYLLQRLLRN 58
++ +E ++W +++RLPT R+ LL E G IDV ++ ER L++ L++
Sbjct: 25 VDDEEELRLQWATVERLPTFKRVTTALLARDEVSGKGRVIDVTRLEGAERRLLIEMLVK- 83
Query: 59 NTVEVDNDHSFLLKLMRDRID---------------------RAGVDIPTIEVRFEHLNV 97
++++D+ LL+ +R RID R G+++PT+EVRF +L+V
Sbjct: 84 ---QIEDDNLRLLRKIRKRIDNNICFVNCMCMLATIEPSCNCRVGIELPTVEVRFNNLSV 140
Query: 98 QAQVHV--GKRALHTITNYMLDLV-EYILKRRKQQLNILQDVSGILKHSR---------- 144
+A+ V GK + T+ N + L+ E+I +++ ++ IL+ VSGI++ R
Sbjct: 141 EAECQVIHGK-PIPTLWNTIKGLLSEFICSKKETKIGILKGVSGIVRPGRVQKRCWFSCR 199
Query: 145 LTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAA 204
+TLLLGPP GKT LL AL+GK ++K+ G+V YNG ++EF+P++T++
Sbjct: 200 MTLLLGPPGCGKTTLLQALSGKFSDSVKV----------GGEVCYNGCSLSEFIPEKTSS 249
Query: 205 YVSQNDTHL 213
Y+SQND H+
Sbjct: 250 YISQNDLHI 258
>At3g25620 membrane transporter, putative
Length = 646
Score = 51.6 bits (122), Expect = 3e-06
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 13/79 (16%)
Query: 132 ILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVSYNG 191
+L+ VSGI+K L +LGP SGKT L+ ALAG+L L +G VSYNG
Sbjct: 98 VLKCVSGIVKPGELLAMLGPSGSGKTTLVTALAGRLQGKL------------SGTVSYNG 145
Query: 192 HEMNEFVPQRTAAYVSQND 210
V ++T +V+Q+D
Sbjct: 146 EPFTSSVKRKT-GFVTQDD 163
>At1g31770 unknown protein
Length = 648
Score = 47.8 bits (112), Expect = 4e-05
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 13/85 (15%)
Query: 126 RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAG 185
+ ++ IL ++G++ +LGP SGKT LL AL G+L + F+G
Sbjct: 75 KSKEKTILNGITGMVCPGEFLAMLGPSGSGKTTLLSALGGRLS------------KTFSG 122
Query: 186 KVSYNGHEMNEFVPQRTAAYVSQND 210
KV YNG + + +RT +V+Q+D
Sbjct: 123 KVMYNGQPFSGCIKRRT-GFVAQDD 146
>At4g27420 putative protein
Length = 635
Score = 47.4 bits (111), Expect = 5e-05
Identities = 27/85 (31%), Positives = 48/85 (55%), Gaps = 10/85 (11%)
Query: 126 RKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAG 185
+ ++ IL+ ++GI+K + +LGP SGKT LL AL G++ + + G
Sbjct: 60 KTEERTILKGLTGIVKPGEILAMLGPSGSGKTSLLTALGGRVG---------EGKGKLTG 110
Query: 186 KVSYNGHEMNEFVPQRTAAYVSQND 210
+SYN +++ V +RT +V+Q+D
Sbjct: 111 NISYNNKPLSKAV-KRTTGFVTQDD 134
>At1g17840 putative ABC transporter (At1g17840)
Length = 703
Score = 44.3 bits (103), Expect = 4e-04
Identities = 31/98 (31%), Positives = 49/98 (49%), Gaps = 12/98 (12%)
Query: 117 DLVEYILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANE 176
DL + + N+L+ ++G + LT L+GP SGK+ +L ALA +L N +
Sbjct: 54 DLTVMVTMGDGETQNVLEGLTGYAEPGSLTALMGPSGSGKSTMLDALASRLAANAFL--- 110
Query: 177 VQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLG 214
+G V NG + + TAAYV+Q+D +G
Sbjct: 111 -------SGTVLLNGRKTK--LSFGTAAYVTQDDNLIG 139
>At2g28070 putative ABC transporter
Length = 705
Score = 43.1 bits (100), Expect = 0.001
Identities = 22/61 (36%), Positives = 36/61 (58%)
Query: 117 DLVEYILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANE 176
DL + +RK +++ +G +T+++GP SGK+ LL ALAG+L P+ K+ E
Sbjct: 118 DLTVTMKGKRKYSDKVVKSSNGYAFPGTMTVIMGPAKSGKSTLLRALAGRLPPSAKMYGE 177
Query: 177 V 177
V
Sbjct: 178 V 178
>At1g51460 ATP-dependent transmembrane transporter like protein
Length = 678
Score = 43.1 bits (100), Expect = 0.001
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 12/83 (14%)
Query: 132 ILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVSYNG 191
+L V+G + +R+ ++GP SGK+ LL ALAG+L N+ + +GKV NG
Sbjct: 30 LLNGVNGCGEPNRILAIMGPSGSGKSTLLDALAGRLAGNVVM----------SGKVLVNG 79
Query: 192 HEMNEFVPQRTAAYVSQNDTHLG 214
+ + AAYV+Q D LG
Sbjct: 80 KKRR--LDFGAAAYVTQEDVLLG 100
>At1g53270 putative ABC transporter emb|AAD22683.1
Length = 590
Score = 42.7 bits (99), Expect = 0.001
Identities = 28/88 (31%), Positives = 45/88 (50%), Gaps = 11/88 (12%)
Query: 123 LKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQ 182
L K++ IL+DVS + + +T + GP +GKT LL LAGK+ + +
Sbjct: 41 LLSEKEEKVILKDVSCDARSAEITAIAGPSGAGKTTLLEILAGKVS-----------HGK 89
Query: 183 FAGKVSYNGHEMNEFVPQRTAAYVSQND 210
+G+V NG M+ +R + +V Q D
Sbjct: 90 VSGQVLVNGRPMDGPEYRRVSGFVPQED 117
>At1g53390 putative ABC transporter gb|AAD31586.1
Length = 1096
Score = 41.6 bits (96), Expect = 0.003
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 16/164 (9%)
Query: 53 QRLLRNNTVEVDNDHSFLLKLMRDRIDRA-GVDIPTIEVRFEHLNVQAQVHVGKRALHTI 111
+R+ ++ S + K DRI++ ++ + F + V+ + R H +
Sbjct: 417 KRVKGQTLAKIKKTQSQIFKYAYDRIEKEKAMEQENKNLTFSGI-VKMATNSETRKRHLM 475
Query: 112 TNYMLDLVEYILKRRKQQLNILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNL 171
DL + KQ +L+ V+G +K R+T ++GP +GKT LL ALAGK
Sbjct: 476 ELSFKDLTLTLKSNGKQ---VLRCVTGSMKPGRITAVMGPSGAGKTSLLSALAGK----- 527
Query: 172 KIANEVQFYEQFAGKVSYNGHEMNEFVPQRTAAYVSQNDTHLGN 215
+ +G + NG + + ++ +V Q+D GN
Sbjct: 528 ------AVGCKLSGLILINGKQESIHSYKKIIGFVPQDDVVHGN 565
>At3g13220 ABC transporter
Length = 647
Score = 39.7 bits (91), Expect = 0.011
Identities = 37/129 (28%), Positives = 58/129 (44%), Gaps = 24/129 (18%)
Query: 131 NILQDVSGILKHSRLTLLLGPPNSGKTILLLALAGKLDPNLKIANEVQFYEQFAGKVSYN 190
+IL+ ++G + L+GP SGKT LL + G+L N+K GK++YN
Sbjct: 67 HILKGITGSTGPGEILALMGPSGSGKTTLLKIMGGRLTDNVK------------GKLTYN 114
Query: 191 GHEMNEFVPQRTAAYVSQNDTHLGN*LSEK----------PWPFQQEFKELDLDMIC*KR 240
+ V +R +V+Q+D L E+ P +E K ++MI K
Sbjct: 115 DIPYSPSV-KRRIGFVTQDDVLLPQLTVEETLAFAAFLRLPSSMSKEQKYAKIEMII-KE 172
Query: 241 CVEERWRKT 249
ER R+T
Sbjct: 173 LGLERCRRT 181
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.352 0.155 0.576
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,643,199
Number of Sequences: 26719
Number of extensions: 958981
Number of successful extensions: 4603
Number of sequences better than 10.0: 72
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 4468
Number of HSP's gapped (non-prelim): 109
length of query: 1226
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1115
effective length of database: 8,352,787
effective search space: 9313357505
effective search space used: 9313357505
T: 11
A: 40
X1: 14 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.5 bits)
S2: 66 (30.0 bits)
Medicago: description of AC146819.12