BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146807.2 + phase: 0
(309 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g79830 unknown protein (At1g79830) 32 0.57
At1g32810 hypothetical protein 32 0.57
At1g49870 hypothetical protein 31 0.75
At2g24500 putative C2H2-type zinc finger protein 31 0.97
At5g53020 putative protein 30 1.3
At5g03060 putative protein 30 1.3
At1g65280 30 1.3
At1g31740 putative protein 30 1.3
At4g31340 unknown protein 30 1.7
At4g08350 putative protein 30 1.7
At2g18540 putative vicilin storage protein (globulin-like) 30 1.7
At1g73860 kinesin-related protein 30 1.7
At1g56660 hypothetical protein 30 2.2
At5g62650 unknown protein 29 2.8
At5g19900 PRLI-interacting factor A 29 2.8
At4g13540 unknown protein (At4g13540) 29 2.8
At1g35060 hypothetical protein 29 2.8
At5g61490 putative protein 28 4.8
At5g50830 unknown protein 28 4.8
At3g58840 unknown protein 28 4.8
>At1g79830 unknown protein (At1g79830)
Length = 918
Score = 31.6 bits (70), Expect = 0.57
Identities = 28/109 (25%), Positives = 48/109 (43%), Gaps = 2/109 (1%)
Query: 198 SAPSIPLPLP--PTTQGMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLM 255
S PS P+ L QG + L E + + Y A+ TL+G+ Q E
Sbjct: 670 SLPSSPIQLSCLRAEQGQLSKSLEKERQRAAENRQEYLAAKEEADTLEGRANQLEVEIRE 729
Query: 256 LKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESESEDHP 304
L+++ + +E+ +EL+ +D +R + R R +S + SE P
Sbjct: 730 LRRKHKQELQEVLLHNELIQKDLEREKASRLDLERTARINSSAVSEQLP 778
>At1g32810 hypothetical protein
Length = 654
Score = 31.6 bits (70), Expect = 0.57
Identities = 15/63 (23%), Positives = 31/63 (48%)
Query: 244 GKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESESEDH 303
GK + + L ++++ +KV R+ ++E+ D + A + + +C + E E E H
Sbjct: 575 GKRKARKRRRLSIQRKGIKVLRKKRNEEEVSEEDEEDAFSDTSEESIFCDEEEEEEEEGH 634
Query: 304 PTT 306
T
Sbjct: 635 TAT 637
>At1g49870 hypothetical protein
Length = 828
Score = 31.2 bits (69), Expect = 0.75
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 2/56 (3%)
Query: 216 EHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKD 271
+H+ +EKQM+KA E EN +G Q HE++ + K ++ RR++ +K+
Sbjct: 639 KHVPKLEKEKQMFKAGVEETENSKRNNEGSLNQ-GHESMKVAKPILS-RRQMRDKE 692
>At2g24500 putative C2H2-type zinc finger protein
Length = 395
Score = 30.8 bits (68), Expect = 0.97
Identities = 27/101 (26%), Positives = 46/101 (44%), Gaps = 8/101 (7%)
Query: 206 LPPTTQGMYQEHLAMESREKQMWKARYNEAENLI---MTLDGKDEQKTHE-NLMLKKELV 261
+P T+ +++ A ++EK + EA L + G K HE +L K ++
Sbjct: 39 VPGVTEALFEARQAAIAQEK----VKAVEAPMLYSCGICNKGYRSSKAHEQHLKSKSHVL 94
Query: 262 KVRRELEEKDELLMRDSKRARGRRNFYARYCGSDSESESED 302
K E+D+ +++ R +N A+ GS E ESED
Sbjct: 95 KASTSTGEEDKAIIKQLPPRRVEKNNTAQLKGSIEEEESED 135
>At5g53020 putative protein
Length = 720
Score = 30.4 bits (67), Expect = 1.3
Identities = 23/80 (28%), Positives = 40/80 (49%), Gaps = 3/80 (3%)
Query: 206 LPPTTQGMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQ---KTHENLMLKKELVK 262
L T + QEH + R+K+ + + L L ++Q K HE L E+ K
Sbjct: 146 LRETQERDVQEHSSELWRQKKTFLELASSQRQLEAELSRANKQIEAKGHELEDLSLEINK 205
Query: 263 VRRELEEKDELLMRDSKRAR 282
+R++LE+KD +L K+++
Sbjct: 206 MRKDLEQKDRILAVMMKKSK 225
>At5g03060 putative protein
Length = 292
Score = 30.4 bits (67), Expect = 1.3
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 208 PTTQGMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRREL 267
PT + + + + ++ ++ K Y E +++ +Q N ++K + K +EL
Sbjct: 23 PTRRNLVVQEEILATKH-EILKENYENLEKDYKSIEESFKQMNEMNEIMKFQYQKQIKEL 81
Query: 268 EEKDELLMRDSKRARGRRNFYARYC-GSDSESES 300
EEK L++D ++ R + Y + G SE E+
Sbjct: 82 EEKILSLLKDLEKERSEKEEYMKEMKGMISEKEA 115
>At1g65280
Length = 605
Score = 30.4 bits (67), Expect = 1.3
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 4/54 (7%)
Query: 257 KKELVKVRRELEEKDELLMRDSKRARGRRNFYAR----YCGSDSESESEDHPTT 306
K+E + R+++E K+ K+ + ++ Y Y GSDS S+ ED P T
Sbjct: 60 KREKERKRKKIERKERKRRDMKKKKKTKKREYESDTESYSGSDSFSDQEDDPET 113
>At1g31740 putative protein
Length = 757
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/88 (23%), Positives = 36/88 (40%), Gaps = 7/88 (7%)
Query: 168 GIAHEAYTQWVINRAEEIGMPYPAMRYVSASAPSIPLPLPPTTQGMYQEHLAMES-REKQ 226
G A +AY QW N A + + P ++ P P+ T G Y ++ + + +
Sbjct: 181 GEAGKAYIQWCANMANSLDVGVP---WIMCQQDDAPQPMLNTCNGYYCDNFSPNNPNTPK 237
Query: 227 MWKARYNEAENLIMTLDGKDEQKTHENL 254
MW + GKD +T E++
Sbjct: 238 MWTENWT---GWYKNWGGKDPHRTTEDV 262
>At4g31340 unknown protein
Length = 437
Score = 30.0 bits (66), Expect = 1.7
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 218 LAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRD 277
L +++EK +AR NEAE + L+ ++ N K ++ K+ R ++ +E ++R
Sbjct: 128 LEQKNKEKDSTEARTNEAEKKLRELNSSLDKLQKTNEEQKNKIGKLERAIKIAEEEMLRT 187
Query: 278 SKRA 281
A
Sbjct: 188 KLEA 191
>At4g08350 putative protein
Length = 1054
Score = 30.0 bits (66), Expect = 1.7
Identities = 18/47 (38%), Positives = 25/47 (52%), Gaps = 3/47 (6%)
Query: 259 ELVKVRRELEEKDELLMRD---SKRARGRRNFYARYCGSDSESESED 302
+L + E EE++E R S+R RGR NF Y DS+ E +D
Sbjct: 19 DLEEEEEEDEEEEEERGRGGGGSRRKRGRSNFIDDYAEEDSQEEDDD 65
>At2g18540 putative vicilin storage protein (globulin-like)
Length = 699
Score = 30.0 bits (66), Expect = 1.7
Identities = 18/68 (26%), Positives = 34/68 (49%), Gaps = 6/68 (8%)
Query: 215 QEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELL 274
+E + + RE+Q K R EA ++E+K E + ++E + R+E EE + +
Sbjct: 534 REEVERKRREEQERKRREEEARKR------EEERKREEEMAKRREQERQRKEREEVERKI 587
Query: 275 MRDSKRAR 282
+ +R R
Sbjct: 588 REEQERKR 595
>At1g73860 kinesin-related protein
Length = 1050
Score = 30.0 bits (66), Expect = 1.7
Identities = 15/59 (25%), Positives = 32/59 (53%)
Query: 224 EKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRAR 282
EK MW+ + E ++ L +++Q E LK+EL +R+ E++ + +K+++
Sbjct: 238 EKSMWEEKKKHEEEDMVKLMKQNDQHNLEISALKQELETTKRKYEQQYSQIESQTKKSK 296
>At1g56660 hypothetical protein
Length = 522
Score = 29.6 bits (65), Expect = 2.2
Identities = 17/85 (20%), Positives = 43/85 (50%), Gaps = 1/85 (1%)
Query: 223 REKQMWKARYNEAENLIMTLDGK-DEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRA 281
+E + K ++E + + D K +++K + +++ K +E +EKDE ++ K+
Sbjct: 226 KEDEEKKKEHDETDQEMKEKDSKKNKKKEKDESCAEEKKKKPDKEKKEKDESTEKEDKKL 285
Query: 282 RGRRNFYARYCGSDSESESEDHPTT 306
+G++ + D ++++H T
Sbjct: 286 KGKKGKGEKPEKEDEGKKTKEHDAT 310
>At5g62650 unknown protein
Length = 529
Score = 29.3 bits (64), Expect = 2.8
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 220 MESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSK 279
MESRE++M ++ + ++ G+ Q + N LKK + + +LE+ DE SK
Sbjct: 432 MESREREMLRSPFLPKITMVGISTGEAAQMSKAN--LKKTMEDLTEDLEQSDEGNDHGSK 489
Query: 280 R 280
R
Sbjct: 490 R 490
>At5g19900 PRLI-interacting factor A
Length = 494
Score = 29.3 bits (64), Expect = 2.8
Identities = 20/70 (28%), Positives = 31/70 (43%)
Query: 233 NEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRRNFYARYC 292
N EN + D Q ENL LK+ L + REL + L +R ++
Sbjct: 306 NVLENRVDDQDSHIAQLEEENLTLKERLFLMERELGDMRRRLQYLERRDMVAQDANEEVV 365
Query: 293 GSDSESESED 302
++SES+ +D
Sbjct: 366 ENESESDGDD 375
>At4g13540 unknown protein (At4g13540)
Length = 210
Score = 29.3 bits (64), Expect = 2.8
Identities = 15/54 (27%), Positives = 32/54 (58%), Gaps = 1/54 (1%)
Query: 219 AMESREKQMWKARYNEAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDE 272
A E R ++ + +E E +I+ L + + E L++E+ ++R+++EEK+E
Sbjct: 21 ANEQRRRET-RRELDEKERVILALKMAETEWRKERKRLREEVKRLRQKMEEKEE 73
>At1g35060 hypothetical protein
Length = 873
Score = 29.3 bits (64), Expect = 2.8
Identities = 21/71 (29%), Positives = 37/71 (51%), Gaps = 9/71 (12%)
Query: 193 RYVSASAPSIPLPLPPTTQGMYQEHLAMESREKQMWKARYNEAENLIMTLDGKDEQKTHE 252
+Y ASA +P+ L Q + E L + + K+ W+AR E+ + + G DE+ ++
Sbjct: 421 KYSEASAGPVPMDL----QQLVLEDLRVSASYKKCWRAR----ESALTDVGGSDEE-SYS 471
Query: 253 NLMLKKELVKV 263
NL L+K+
Sbjct: 472 NLAEYLHLLKL 482
>At5g61490 putative protein
Length = 260
Score = 28.5 bits (62), Expect = 4.8
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Query: 36 LCCVPLLYRWFISHLPSSFHDNSENWSYSQRIMALTPNEVVW--ITPTAQVKEIIT 89
LC LL + + L +FH + S + +M+LT ++ VW + V+E+I+
Sbjct: 118 LCNTSLLQPFMLDRLYDAFHVFQTDPSVQRMVMSLTSDKAVWDAVMNNEVVRELIS 173
>At5g50830 unknown protein
Length = 281
Score = 28.5 bits (62), Expect = 4.8
Identities = 13/43 (30%), Positives = 22/43 (50%)
Query: 243 DGKDEQKTHENLMLKKELVKVRRELEEKDELLMRDSKRARGRR 285
D DE+K E+ E V E++E ++ ++ K RG+R
Sbjct: 201 DDDDEEKDVEDARKSMETESVTTEIKEDGSIVKKEKKERRGKR 243
>At3g58840 unknown protein
Length = 318
Score = 28.5 bits (62), Expect = 4.8
Identities = 13/40 (32%), Positives = 24/40 (59%)
Query: 234 EAENLIMTLDGKDEQKTHENLMLKKELVKVRRELEEKDEL 273
E E I ++ K+++ T EN LK+ L ++ E+EE ++
Sbjct: 24 ELERKIEDMENKNQELTRENRELKERLERLTGEIEEMKDV 63
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.318 0.134 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,591,527
Number of Sequences: 26719
Number of extensions: 344030
Number of successful extensions: 1157
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1135
Number of HSP's gapped (non-prelim): 36
length of query: 309
length of database: 11,318,596
effective HSP length: 99
effective length of query: 210
effective length of database: 8,673,415
effective search space: 1821417150
effective search space used: 1821417150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146807.2