BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146791.7 + phase: 0 /pseudo
         (694 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g22130 hypothetical protein                                         34  0.24
At2g25680 hypothetical protein                                         31  2.7
At4g29020 glycine-rich protein like                                    30  3.5
At4g22500 putative protein                                             30  3.5
At5g24210 unknown protein                                              29  7.8

>At3g22130 hypothetical protein
          Length = 166

 Score = 34.3 bits (77), Expect = 0.24
 Identities = 30/92 (32%), Positives = 45/92 (48%), Gaps = 15/92 (16%)

Query: 442 GSGVGGYLLIEEGCGIGCWLVDMVLGMGGWRMGAGVVLFGGRRLVGLEEGRVGAVLDGLR 501
           G GVGG  ++  G G+G        G+    +G G V+ GG  + G+  G VG  + G  
Sbjct: 4   GVGVGG--VMTGGVGVG--------GVTTGGVGVGGVMTGGVGVGGVTTGGVGVGVGGGH 53

Query: 502 VVWLGVWVMGRILCFGMSGGVEMSLSGLDLEG 533
            V  G+W  G    FG+ GG  + + GL ++G
Sbjct: 54  GVGGGLWWGG----FGVDGG-GLVVGGLGVDG 80


>At2g25680 hypothetical protein
          Length = 456

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 30/85 (35%), Positives = 42/85 (49%), Gaps = 16/85 (18%)

Query: 457 IGCWLVDMVL--GMGGWRMGAGVVLFGGRR-----LVGLEEGRVGAVLDGLRVVWLG--- 506
           +GCW   M    G GG    AG   FGGR      L+G+ +  +G VL G  V  L    
Sbjct: 322 VGCWFGAMPTCHGAGGL---AGQYKFGGRSGGCVALLGVAKLVLGLVLGGSLVGILEKFP 378

Query: 507 VWVMGRILCFGMSGGVEMSLSGLDL 531
           V V+G +L F    GVE++++  D+
Sbjct: 379 VGVLGALLLFA---GVELAMAARDM 400


>At4g29020 glycine-rich protein like
          Length = 158

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 40/138 (28%), Positives = 54/138 (38%), Gaps = 34/138 (24%)

Query: 443 SGVGGYLLIEEGCGIGCWLVDMVLGMGGWRMGAGVVLFGGRRLVGLEEGRVGAVLDGLRV 502
           +GVGG   I    G+G  L  +  G+GG    AGV+  GG   VG   G +G  + GL  
Sbjct: 44  AGVGGAAGIGGAGGVGAGLGGVAGGVGGV---AGVLPVGG---VGGGIGGLGGGVGGLG- 96

Query: 503 VWLGVWVMGRILCFGMSG-----GVEMSLSGLDLEGYLI*L*INPLVLKRCSL*DGGGGR 557
             LG    G  L  G+ G     G+   + GL                        GG  
Sbjct: 97  -GLGGLGGGSGLGHGVGGIGGDPGIGSGIGGLG---------------------GAGGLG 134

Query: 558 GMAVASKIVGVGGGASCG 575
           G+     + G+GGG+ CG
Sbjct: 135 GIGGVGGLGGIGGGSDCG 152


>At4g22500 putative protein
          Length = 490

 Score = 30.4 bits (67), Expect = 3.5
 Identities = 39/109 (35%), Positives = 43/109 (38%), Gaps = 21/109 (19%)

Query: 467 GMGGWRMGAGVVLFGGRRLVGLEEGRVGAVLDGLRVVWLGVWVMGRILCFGMSGGVEMSL 526
           G+GG R G    + GG  + G   G VG VL G R    G  V G I   G SGGV    
Sbjct: 202 GIGGARGGELGGVLGGD-IGGARGGEVGGVLGGDRGGARGGEVGGVI--GGDSGGVRGGE 258

Query: 527 SGLDLEGYLI*L*INPLVLKRCSL*DGGGGRGMAVASKIVGVGGGASCG 575
            G  L G                  D GG RG AV   + G  GGA  G
Sbjct: 259 VGGVLGG------------------DSGGARGGAVGEILGGGTGGARGG 289


>At5g24210 unknown protein
          Length = 350

 Score = 29.3 bits (64), Expect = 7.8
 Identities = 15/44 (34%), Positives = 27/44 (61%), Gaps = 2/44 (4%)

Query: 507 VWVMGRILCFGMS--GGVEMSLSGLDLEGYLI*L*INPLVLKRC 548
           VW+ G  L  G++   G +M++SGL +E Y+    I+ + L++C
Sbjct: 161 VWIAGHSLGAGLALLAGKDMAMSGLPVEAYIFNPPISLIPLEQC 204


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.370    0.171    0.670 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,664,762
Number of Sequences: 26719
Number of extensions: 484678
Number of successful extensions: 2440
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 0
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2417
Number of HSP's gapped (non-prelim): 23
length of query: 694
length of database: 11,318,596
effective HSP length: 106
effective length of query: 588
effective length of database: 8,486,382
effective search space: 4989992616
effective search space used: 4989992616
T: 11
A: 40
X1: 14 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.7 bits)
S2: 64 (29.3 bits)