BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146790.4 - phase: 0 
         (147 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g06660 putative CENP-B/ARS binding protein-like protein            138  1e-33
At3g27920 MYB family transcription factor (GL1)                        31  0.27
At3g11440 transcription factor like protein (MYB65)                    28  1.3
At2g34760 unknown protein                                              28  1.3
At4g26930 putative myb-related protein                                 27  3.9
At4g17885 unknown protein                                              27  5.1
At5g06100 transcription factor MYB33 - like protein                    26  6.7
At5g02150 unknown protein (At5g02150)                                  26  6.7
At3g25710 putative bHLH transcription factor (bHLH032)                 26  6.7
At5g14750 myb transcription factor werewolf (WER)/ MYB66               26  8.7
At5g11040 putative protein                                             26  8.7
At4g30030 putative protein                                             26  8.7

>At2g06660 putative CENP-B/ARS binding protein-like protein
          Length = 283

 Score =  138 bits (347), Expect = 1e-33
 Identities = 63/75 (84%), Positives = 69/75 (92%)

Query: 1   MTSKIQPCDAGIIRAFKMHYRRRFYRKILEGYEVGQSDPGKINVLDAINLAIPTWTIDVR 60
           MTSKIQPCDAGIIRAFKMHYRRRFYR+ILEGYE+GQSDPG INVLDAI+ A+  WTI+VR
Sbjct: 208 MTSKIQPCDAGIIRAFKMHYRRRFYREILEGYELGQSDPGTINVLDAISFAVSAWTINVR 267

Query: 61  KETIANCFRHCKIRS 75
           +ETI NCFRHCKI S
Sbjct: 268 RETILNCFRHCKIHS 282


>At3g27920 MYB family transcription factor (GL1)
          Length = 228

 Score = 30.8 bits (68), Expect = 0.27
 Identities = 22/80 (27%), Positives = 39/80 (48%), Gaps = 3/80 (3%)

Query: 18 MHYRRRFYRKILEGYEVGQSDPGKINVLD--AINLAIPTWTIDVRKETIANCFRHCKIRS 75
          M  RRR  ++  E Y+ G     + N+L    +N     W   VRK  +  C + C++R 
Sbjct: 1  MRIRRRDEKENQE-YKKGLWTVEEDNILMDYVLNHGTGQWNRIVRKTGLKRCGKSCRLRW 59

Query: 76 ASDVVGNLDESTFDEETQDL 95
           + +  N+++  F E+ +DL
Sbjct: 60 MNYLSPNVNKGNFTEQEEDL 79


>At3g11440 transcription factor like protein (MYB65)
          Length = 553

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 11/41 (26%), Positives = 22/41 (52%)

Query: 55  WTIDVRKETIANCFRHCKIRSASDVVGNLDESTFDEETQDL 95
           W    +  ++A C + C++R A+ +  NL +  F +E + L
Sbjct: 66  WNAVQKHTSLARCGKSCRLRWANHLRPNLKKGAFSQEEEQL 106


>At2g34760 unknown protein
          Length = 613

 Score = 28.5 bits (62), Expect = 1.3
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 6/59 (10%)

Query: 77  SDVVGNLDESTFDEETQDLQTMINQCG------YRNKMDIDNLMNYPGENEACSEVQSL 129
           ++V+ N DE + +++  DL   +N+        ++NKM+ D L+  P      +  +SL
Sbjct: 555 AEVIVNGDEDSDEDDEADLDYALNKMSITPKHSFKNKMERDRLLRMPSRIRPSTSPESL 613


>At4g26930 putative myb-related protein
          Length = 389

 Score = 26.9 bits (58), Expect = 3.9
 Identities = 12/41 (29%), Positives = 22/41 (53%)

Query: 55 WTIDVRKETIANCFRHCKIRSASDVVGNLDESTFDEETQDL 95
          W    +K  +A C + C++R A+ +  NL + +F  E + L
Sbjct: 44 WNSVQKKTWLARCGKSCRLRWANHLRPNLRKGSFTPEEERL 84


>At4g17885 unknown protein
          Length = 413

 Score = 26.6 bits (57), Expect = 5.1
 Identities = 17/61 (27%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 61  KETIANCFRHCKIRSASDVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGEN 120
           K T+        I SA     + D+S  D    DL   IN+  ++ + D+ +L+N  GE 
Sbjct: 337 KATLQKFAGSASISSADFYGHDQDDSNIDITASDL---INRLSFQAQQDLSSLVNIAGET 393

Query: 121 E 121
           +
Sbjct: 394 K 394


>At5g06100 transcription factor MYB33 - like protein
          Length = 520

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 10/41 (24%), Positives = 21/41 (50%)

Query: 55 WTIDVRKETIANCFRHCKIRSASDVVGNLDESTFDEETQDL 95
          W    +  ++  C + C++R A+ +  NL +  F +E + L
Sbjct: 57 WNAVQKHTSLFRCGKSCRLRWANHLRPNLKKGAFSQEEEQL 97


>At5g02150 unknown protein (At5g02150)
          Length = 324

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 78  DVVGNLDESTFDEETQDLQTMINQCGYRNKMDIDNLMNYPGENEACSEVQSLEDIVCTII 137
           D+ G LDE     E+ D+   ++  G      +  L+ Y   + A    +S  D+V TI+
Sbjct: 74  DIEGLLDELQEHVESIDMANDLHSVG-----GLVPLLGYLKNSNANIRAKSA-DVVSTIV 127

Query: 138 ENNAEDDE 145
           ENN    E
Sbjct: 128 ENNPRSQE 135


>At3g25710 putative bHLH transcription factor (bHLH032)
          Length = 344

 Score = 26.2 bits (56), Expect = 6.7
 Identities = 18/61 (29%), Positives = 28/61 (45%), Gaps = 12/61 (19%)

Query: 89  DEETQDLQTMINQCGYRNKMDIDNLMNYPGENEACSEVQSLEDIVCTIIE----NNAEDD 144
           DEE  D         YR   D D++ +Y  E    + V S+E+ +  +IE    NN E +
Sbjct: 266 DEEDHD--------SYRRNFDGDDVEDYDEERMMNNRVSSIEEALKAVIEKCVHNNDESN 317

Query: 145 E 145
           +
Sbjct: 318 D 318


>At5g14750 myb transcription factor werewolf (WER)/ MYB66
          Length = 203

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 10/41 (24%), Positives = 20/41 (48%)

Query: 55 WTIDVRKETIANCFRHCKIRSASDVVGNLDESTFDEETQDL 95
          W    +K  +  C + C++R  + +  N+    F E+ +DL
Sbjct: 41 WNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGNFTEQEEDL 81


>At5g11040 putative protein
          Length = 1186

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query: 27   KILEGYEVGQSDPGKINVLDAINLAIPTWTIDV 59
            KI   ++ G++  G++++ DAI  A+ T  +DV
Sbjct: 999  KIKVRWQSGRNSSGELDIKDAIQTALQTTVMDV 1031


>At4g30030 putative protein
          Length = 424

 Score = 25.8 bits (55), Expect = 8.7
 Identities = 17/52 (32%), Positives = 21/52 (39%), Gaps = 5/52 (9%)

Query: 60  RKETIANCFRHCKIRSASDVVGNLDESTFDEETQD-----LQTMINQCGYRN 106
           R E   NC  H + R  S+  G L E     ET D      Q ++  CG  N
Sbjct: 144 RDEKTGNCQYHLRYRDFSNTRGILAEEKLTFETSDDGLISKQNIVFGCGQDN 195


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.319    0.136    0.403 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,283,730
Number of Sequences: 26719
Number of extensions: 128151
Number of successful extensions: 326
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 319
Number of HSP's gapped (non-prelim): 12
length of query: 147
length of database: 11,318,596
effective HSP length: 90
effective length of query: 57
effective length of database: 8,913,886
effective search space: 508091502
effective search space used: 508091502
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)