BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146790.3 + phase: 0 /pseudo
(1363 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45230 putative non-LTR retroelement reverse transcriptase 760 0.0
At2g25550 putative non-LTR retroelement reverse transcriptase 702 0.0
At2g31520 putative non-LTR retroelement reverse transcriptase 684 0.0
At1g47910 reverse transcriptase, putative 676 0.0
At2g17910 putative non-LTR retroelement reverse transcriptase 669 0.0
At2g01840 putative non-LTR retroelement reverse transcriptase 654 0.0
At1g24640 hypothetical protein 631 0.0
At4g09710 RNA-directed DNA polymerase -like protein 610 e-174
At2g05200 putative non-LTR retroelement reverse transcriptase 594 e-169
At3g31420 hypothetical protein 587 e-167
At2g16680 putative non-LTR retroelement reverse transcriptase 583 e-166
At4g10830 putative protein 581 e-166
At3g32110 non-LTR reverse transcriptase, putative 570 e-162
At2g41580 putative non-LTR retroelement reverse transcriptase 538 e-152
At3g45550 putative protein 535 e-152
At2g11240 pseudogene 524 e-148
At2g31080 putative non-LTR retroelement reverse transcriptase 523 e-148
At2g17610 putative non-LTR retroelement reverse transcriptase 452 e-127
At1g25430 hypothetical protein 421 e-117
At4g15590 reverse transcriptase like protein 420 e-117
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 760 bits (1963), Expect = 0.0
Identities = 443/1369 (32%), Positives = 713/1369 (51%), Gaps = 69/1369 (5%)
Query: 4 MKLLSWNCRGLGNPRAIRALLRLIRIQNPQVVFLMETRLKSDEMERVRINCGFSSGLFVP 63
M++LSWNC+G+GN +R L + + P+V+FL ET+ + + +E V + GF V
Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60
Query: 64 CDGFGKERACDIALLWMDSVNLSIRSYSLNHIMGRIEDVESGKYWSITGIYGYPDETNKK 123
G ++ +AL+W DSV + + I + + K + +T IYG P + +
Sbjct: 61 PIG----KSGGLALMWKDSVQIKVLQSDKRLIDALL--IWQDKEFYLTCIYGEPVQAERG 114
Query: 124 KTWDLLRSLTPVEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNAVEDCNLLDLGF 183
+ W+ L L W+ GDFN+++ EK GG R R + C L ++
Sbjct: 115 ELWERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNH 174
Query: 184 NGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIELDVCL 243
+GY F+W R+ + CRLDR A+ +++ F + +L + SDH+ + L
Sbjct: 175 SGYQFSWYGNRNDE-LVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPLINNL---- 229
Query: 244 EDAHKKKLHVFRFEKCWADDDRCEAMVRGSWNNATG-----LASKIEAMQSLDSKFKEYI 298
+ +K F+++K W + + ++ W+ + + KI + + SK+K
Sbjct: 230 VGDNWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMMEKIASCRREISKWKRVS 289
Query: 299 TSEIRKELLEIETQLNNHASWDGSPDNITKFRELEAKHSELLQTEETMWRQRSRATWLKE 358
+ E++ +L+ A+ P + + L+ + S+ EE W+++SR W++
Sbjct: 290 KPSSAVRIQELQFKLD--AATKQIPFDRRELARLKKELSQEYNNEEQFWQEKSRIMWMRN 347
Query: 359 GDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPT-TVD 417
GD+N+K+FHA K R N I+K+ D+ G W + + +V YF LF S + TV+
Sbjct: 348 GDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGYTVE 407
Query: 418 QTCLVVKDRLSPEHVEWCNRSF----SPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYI 473
+ + L+P + N + + E++ A ++P K PGPDG+ +Q++W
Sbjct: 408 EL-----ENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWET 462
Query: 474 VGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIA 533
+G ++ + G E +NKT I LIPK FRPISLCNV+ K++ K +A
Sbjct: 463 MGDQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMA 522
Query: 534 NRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYD 593
NRLK ILP ++ E Q+AFV+GRLI+DN +IA E H + K + +A+K D++KAYD
Sbjct: 523 NRLKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYD 582
Query: 594 RIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPY 653
R+EW F++ ++ + F ++ I I++C+ +V YQ+LING P P RGLRQGDPLSPY
Sbjct: 583 RVEWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPY 642
Query: 654 LFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISV 713
LF++C +L +L+ E+ N+I G+++AR AP I+HLLFADD + + + + E II +
Sbjct: 643 LFVICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRI 702
Query: 714 LNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKK 773
+ Y ASGQ VN KS + + +++ + ++ +++ I+ YLGLP F SK
Sbjct: 703 IEEYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKV 762
Query: 774 EVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGML 833
S++++R+ KK+ GW+ LS GKE L+KAVA A+P Y MSC+K+P+ C +E ++
Sbjct: 763 ATLSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVM 822
Query: 834 AKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMS 893
A+FWW + + R +HW W L K GGLGF+ FN ALLGKQ WR++ + +SLM+
Sbjct: 823 AEFWWKNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMA 882
Query: 894 SILKSRYFPRTSISITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWI-- 951
+ KSRYF ++ +G +P +AW+S+ +A+ L++ VIGNG T+ ++ D WI
Sbjct: 883 KVFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGA 942
Query: 952 -PGTRCTPIQR----TEGTVDEDAVVADLIVHETRSWDRERIMASFNSFIAKKILSIPIS 1006
P ++R ++ + VV DL++ + R W+ + F + IL++
Sbjct: 943 KPAKAAQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPG 1002
Query: 1007 FRLPDDKVTWQWEKSGEYSVRSGHHLLCE-----NKSKEVAESSSVRGSDIWKQIWNFNG 1061
+ D+ TW++ +SG YSV+SG+ ++ E N +EV + S I++QIW +
Sbjct: 1003 GKETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSL---DPIFQQIWKLDV 1059
Query: 1062 PRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNSGLEDLNHLFLHCPAAKAVWFSS 1121
P +FLWR +N L NL+ + ++ ++SC C S E +NHL CP A+ W S
Sbjct: 1060 PPKIHHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAIS 1119
Query: 1122 PLGIHIPPNSMCREWME---------LWLKKDDPLAVQVFGI---TLWRLWQGRNQLIFK 1169
PL PP EW E L + K P + LWRLW+ RN L+FK
Sbjct: 1120 PL--PAPPGG---EWAESLFRNMHHVLSVHKSQPEESDHHALIPWILWRLWKNRNDLVFK 1174
Query: 1170 NSPFDPALIAQSAVLLVEEFNLANRKAACHPISRAPTR-----WCPPQTGTVKINVDAGV 1224
F + A E+ + N + P + TR W PP G VK N D
Sbjct: 1175 GREFTAPQVILKA---TEDMDAWNNRKEPQPQVTSSTRDRCVKWQPPSHGWVKCNTDGAW 1231
Query: 1225 FTD-GSTGWGFVARDHHGAVLFSATRKEEMMVTPLVAERLALRWCLSWAEGEQFTSLCIE 1283
D G+ G G+V R+H G +L+ R + L E ALRW + + + E
Sbjct: 1232 SKDLGNCGVGWVLRNHTGRLLWLGLRALPSQQSVLETEVEALRWAVLSLSRFNYRRVIFE 1291
Query: 1284 TDAEQVVHCLLRRKKIAAIEFLILDCLDYLSRFSTCSVNFAGRSCNQVA 1332
+D++ +V + I ++ I D + L F F R N VA
Sbjct: 1292 SDSQYLVSLIQNEMDIPSLAPRIQDIRNLLRHFEEVKFQFTRREGNNVA 1340
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 702 bits (1813), Expect = 0.0
Identities = 444/1381 (32%), Positives = 702/1381 (50%), Gaps = 54/1381 (3%)
Query: 13 GLGNPRAIRALLRLIRIQNPQVVFLMETRLKSDEMERVRINCGFSSGLFVPCDGFGKERA 72
G+G P L RL R+ N ++FL+ET + D++ ++ + GF + + P +G R+
Sbjct: 391 GIGMPLTQSRLFRLFRMYNYDILFLVETLNQCDKVCKLAYDLGFPNVITQPPNG----RS 446
Query: 73 CDIALLWMDSVNLSIRSYSLNHIMGRIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSL 132
+AL+W ++V+LS+ S I + + K + ++ +YG+P ++ + + W L +
Sbjct: 447 GGLALMWKNNVSLSLISQDERLIDSHV--TFNNKSFYLSCVYGHPTQSERHQLWQTLEHI 504
Query: 133 TPVEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSN 192
+ WL GDFN+ILSN EK GG +R RN V C++ D+ G F+W
Sbjct: 505 SDNRNAEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVG 564
Query: 193 GRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKLH 252
RH + + C LDRVF + + F +I L GSDH + + + ++ ++
Sbjct: 565 ERH-THTVKCCLDRVFINSAWTATFPYAEIEFLDFTGSDHKPVLVHFN----ESFPRRSK 619
Query: 253 VFRFEKCWADDDRCEAMVRGSW-----NNATGLASKIEAMQSLDSKFKEYITSEIRKELL 307
+FRF+ D + +V+ SW + +T + +I + + ++ K + +
Sbjct: 620 LFRFDNRLIDIPTFKRIVQTSWRTNRNSRSTPITERISSCRQAMARLKHASNLNSEQRIK 679
Query: 308 EIETQLNNHASWDGSPDNITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFH 367
++++ LN D +L+ ++ EE W+Q+SR W+KEGD+N+ +FH
Sbjct: 680 KLQSSLNRAMESTRRVDR-QLIPQLQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFH 738
Query: 368 AKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRL 427
A K R N + I DD+G + G ++ D+F +F+++ K +
Sbjct: 739 ACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTV 798
Query: 428 SPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILN 487
+ + FS EI DAI Q+ KAPGPDGL A F++ W IVG +V+
Sbjct: 799 TNTVNLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFE 858
Query: 488 EGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEE 547
IN T I +IPK NP++ + +RPI+LCNV+ K+++K + NRLK L I+ +
Sbjct: 859 TSFMKPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDS 918
Query: 548 QSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSM 607
Q+AF+ GR+I DN +IA E H +K + + K MA+K D++KAYDR+EW F+++ ++
Sbjct: 919 QAAFIPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLF 978
Query: 608 NFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLK 667
F I I+ + +V Y +LING P P RG+RQGDPLSPYLFILC ++LS L+
Sbjct: 979 GFCNKWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLIN 1038
Query: 668 KEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNL 727
+ G+RI AP ITHL FADD L F +A+V Q + V + Y+ SGQ +N+
Sbjct: 1039 GRASSGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINV 1098
Query: 728 DKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKI 787
KS +++ V + + Q + I +YLGLP FGR KKE+F ++ +RV K+
Sbjct: 1099 QKSMITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRT 1158
Query: 788 KGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKI 847
W + LS AGKE ++K+VA A+P Y MSC+KLP+G +E +L FWW +R I
Sbjct: 1159 STWSARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGI 1218
Query: 848 HWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSIS 907
W+ W RL +KK GGLGFR + FN ALL KQ WRL+ NSL + ++K+RYF SI
Sbjct: 1219 PWVAWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSIL 1278
Query: 908 ITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVD 967
KV Q Y W SL+ L++ +IG+G+ +RI DN + P+ TE T
Sbjct: 1279 DAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHPPRPL-NTEETYK 1337
Query: 968 EDAVVADLIVHETR--SWDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYS 1025
E + +L + WD +I + I I ++ DK+ W + +GEY+
Sbjct: 1338 E-MTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYT 1396
Query: 1026 VRSGHHLLCENKSKEVAESSSVRGS-DIWKQIWNFNGPRSAQNFLWRLASNILPTRCNLS 1084
VRSG+ LL + S + + GS D+ +IWN ++FLWR S L T L+
Sbjct: 1397 VRSGYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLT 1456
Query: 1085 KKGISLDQSCPLCNSGLEDLNHLFLHCPAAKAVWFSSPLGIHIPPNSMCREWME-----L 1139
+G+ +D SCP C+ E +NH CP A W S + I M ++ E L
Sbjct: 1457 TRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSL-IRNQLMSNDFEENISNIL 1515
Query: 1140 WLKKDDPLA-----VQVFGITLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLANR 1194
+D ++ + V+ +WR+W+ RN ++F P+ SA ++ A +
Sbjct: 1516 NFVQDTTMSDFHKLLPVW--LIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQ 1573
Query: 1195 KAACHPISRAPTR--------WCPPQTGTVKINVDAG--VFTDGSTGWGFVARDHHGAVL 1244
H + +PTR W P VK N DAG V +TG G++ R+H+G +
Sbjct: 1574 S---HKKTPSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATG-GWIIRNHYGTPI 1629
Query: 1245 FSATRKEEMMVTPLVAERLALRWCL--SWAEGEQFTSLCIETDAEQVVHCLLRRKKIAAI 1302
+ K PL AE AL L +W G +T + +E D + +++ + +++
Sbjct: 1630 SWGSMKLAHTSNPLEAETKALLAALQQTWIRG--YTQVFMEGDCQTLINLINGISFHSSL 1687
Query: 1303 EFLILDCLDYLSRFSTCSVNFAGRSCNQVAHSLVGLAKTVGNI-CWVGSVPQQIYPSLCK 1361
+ D + ++F++ F + N++AH L T GS+P + C
Sbjct: 1688 ANHLEDISFWANKFASIQFGFIRKKGNKLAHVLAKYGCTYSTFYSDSGSLPIWLDRYFCN 1747
Query: 1362 D 1362
D
Sbjct: 1748 D 1748
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 684 bits (1765), Expect = 0.0
Identities = 433/1356 (31%), Positives = 687/1356 (49%), Gaps = 54/1356 (3%)
Query: 38 METRLKSDEMERVRINCGFSSGLFVPCDGFGKERACDIALLWMDSVNLSIRSYSLNHIMG 97
+ET + D++ ++ + GF + + P +G R+ +AL+W ++V+LS+ S I
Sbjct: 190 LETLNQCDKVCKLAYDLGFPNVITQPPNG----RSGGLALMWKNNVSLSLISQDERLIDS 245
Query: 98 RIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSLTPVEEDMWLCCGDFNDILSNEEKAG 157
+ + K + ++ +YG+P ++ + + W L ++ WL GDFN+ILSN EK G
Sbjct: 246 HV--TFNNKSFYLSCVYGHPTQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIG 303
Query: 158 GNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRF 217
G +R RN V C++ D+ G F+W RH + + C LDRVF + + F
Sbjct: 304 GPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVGERH-THTVKCCLDRVFINSAWTATF 362
Query: 218 SPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVRGSW--- 274
+ L GSDH + + + ++ ++ +FRF+ D + +V+ SW
Sbjct: 363 PYAETEFLDFTGSDHKPVLVHFN----ESFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTN 418
Query: 275 --NNATGLASKIEAMQSLDSKFKEYITSEIRKELLEIETQLNNHASWDGSPDNITKFREL 332
+ +T + +I + + ++ K + + ++++ LN D +L
Sbjct: 419 RNSRSTPITERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDR-QLIPQL 477
Query: 333 EAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNG 392
+ ++ EE W+Q+SR W+KEGD+N+ +FHA K R N + I DD+G + G
Sbjct: 478 QESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTG 537
Query: 393 RDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRLSPEHVEWCNRSFSPAEIKDAIDQMH 452
++ D+F +F+++ K ++ + FS EI DAI Q+
Sbjct: 538 DKEIGNHAQDFFTNIFSTNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIG 597
Query: 453 PLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSP 512
KAPGPDGL A F++ W IVG +V+ IN T I +IPK NP++
Sbjct: 598 DDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTL 657
Query: 513 NQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMK 572
+ +RPI+LCNV+ K+++K + NRLK L I+ + Q+AF+ GR+I DN +IA E H +K
Sbjct: 658 SDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLK 717
Query: 573 KKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILING 632
+ + K MA+K D++KAYDR+EW F+++ ++ F I I+ + +V Y +LING
Sbjct: 718 VRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLING 777
Query: 633 QPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLF 692
P P RG+RQGDPLSPYLFILC ++LS L+ + G+RI AP ITHL F
Sbjct: 778 SPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQF 837
Query: 693 ADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINI 752
ADD L F +A+V Q + V + Y+ SGQ +N+ KS +++ V + + Q + I
Sbjct: 838 ADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEI 897
Query: 753 KTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIP 812
+YLGLP FGR KKE+F ++ +RV K+ W + LS AGKE ++K+VA A+P
Sbjct: 898 PNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMP 957
Query: 813 NYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDF 872
Y MSC+KLP+G +E +L FWW +R I W+ W RL +KK GGLGFR + F
Sbjct: 958 VYAMSCFKLPKGIVSEIESLLMNFWWEKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKF 1017
Query: 873 NKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPRYAWRSLMKARELVEND 932
N ALL KQ WRL+ NSL + ++K+RYF SI KV Q Y W SL+ L++
Sbjct: 1018 NDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKG 1077
Query: 933 AHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVDEDAVVADLIVHETR--SWDRERIMA 990
+IG+G+ +RI DN + P+ TE T E + +L + WD +I
Sbjct: 1078 TRHLIGDGQNIRIGLDNIVDSHPPRPL-NTEETYKE-MTINNLFERKGSYYFWDDSKISQ 1135
Query: 991 SFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKSKEVAESSSVRGS 1050
+ I I ++ DK+ W + +GEY+VRSG+ LL + S + + GS
Sbjct: 1136 FVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGS 1195
Query: 1051 -DIWKQIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNSGLEDLNHLFL 1109
D+ +IWN ++FLWR S L T L+ +G+ +D CP C+ E +NH
Sbjct: 1196 IDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALF 1255
Query: 1110 HCPAAKAVWFSSPLGIHIPPNSMCREWME-----LWLKKDDPLA-----VQVFGITLWRL 1159
CP A W+ S + I M ++ E L +D ++ + V+ +WR+
Sbjct: 1256 TCPFATMAWWLSDSSL-IRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVW--LIWRI 1312
Query: 1160 WQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLANRKAACHPISRAPTR--------WCPP 1211
W+ RN ++F P+ SA ++ A + H + +PTR W P
Sbjct: 1313 WKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQS---HKKTPSPTRQIAENKIEWRNP 1369
Query: 1212 QTGTVKINVDAG--VFTDGSTGWGFVARDHHGAVLFSATRKEEMMVTPLVAERLALRWCL 1269
VK N DAG V +TG G++ R+H+G + + K PL AE AL L
Sbjct: 1370 PATYVKCNFDAGFDVQKLEATG-GWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAAL 1428
Query: 1270 --SWAEGEQFTSLCIETDAEQVVHCLLRRKKIAAIEFLILDCLDYLSRFSTCSVNFAGRS 1327
+W G +T + +E D + +++ + +++ + D + ++F++ F R
Sbjct: 1429 QQTWIRG--YTQVFMEGDCQTLINLINGISFHSSLANHLEDISFWANKFASIQFGFIRRK 1486
Query: 1328 CNQVAHSLVGLAKTVGNI-CWVGSVPQQIYPSLCKD 1362
N++AH L T GS+P + C D
Sbjct: 1487 GNKLAHVLAKYGCTYSTFYSGSGSLPIWLDRYFCND 1522
>At1g47910 reverse transcriptase, putative
Length = 1142
Score = 676 bits (1744), Expect = 0.0
Identities = 389/1129 (34%), Positives = 596/1129 (52%), Gaps = 43/1129 (3%)
Query: 254 FRFEKCWADDDRCEAMVRGSWNNATGL-----ASKIEAMQSLDSKFKEYITSEIRKELLE 308
FRF+K W D + WN +G K+ + SK+++ + R+ + +
Sbjct: 24 FRFDKRWIGKDGLLEAISQGWNLDSGFREGQFVEKLTNCRRAISKWRKSLIPFGRQTIED 83
Query: 309 IETQLN-NHASWDGSPDNITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFH 367
++ +L+ D S + IT EL + E + EE W Q+SR+ W+K GD NSKFFH
Sbjct: 84 LKAELDVAQRDDDRSREEIT---ELTLRLKEAYRDEEQYWYQKSRSLWMKLGDNNSKFFH 140
Query: 368 AKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRL 427
A KQR N I + D+ G+W D ++ + V YF LFT++NP D+ V+ +
Sbjct: 141 ALTKQRRARNRITGLHDENGIWSIEDDDIQNIAVSYFQNLFTTANPQVFDEALGEVQVLI 200
Query: 428 SPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILN 487
+ + + E++ A+ +HP KAPGPDG+ ALFFQK W I+ S+++SL L
Sbjct: 201 TDRINDLLTADATECEVRAALFMIHPEKAPGPDGMTALFFQKSWAIIKSDLLSLVNSFLQ 260
Query: 488 EGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEE 547
EG + +N T I LIPK + P+ + RPISLCNV K+++K + RLK +LP ++ E
Sbjct: 261 EGVFDKRLNTTNICLIPKTERPTRMTELRPISLCNVGYKVISKILCQRLKTVLPNLISET 320
Query: 548 QSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSM 607
QSAFV GRLI+DN +IA E FH ++ + K MA+K DM+KAYD++EW+F++++L+ M
Sbjct: 321 QSAFVDGRLISDNILIAQEMFHGLRTNSSCKDKFMAIKTDMSKAYDQVEWNFIEALLRKM 380
Query: 608 NFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLK 667
F E I+ I+ CI+TV Y++LINGQP PERGLRQGDPLSPYLFILC VL ++
Sbjct: 381 GFCEKWISWIMWCITTVQYKVLINGQPKGLIIPERGLRQGDPLSPYLFILCTEVLIANIR 440
Query: 668 KEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNL 727
K E+ N I GI++A +P ++HLLFADD L F +A+ E+ I+ +L Y+ SGQ +N
Sbjct: 441 KAERQNLITGIKVATPSPAVSHLLFADDSLFFCKANKEQCGIILEILKQYESVSGQQINF 500
Query: 728 DKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKI 787
KS + + V + K I + I + YLGLP G SK +VFSFV++R+ +I
Sbjct: 501 SKSSIQFGHKVEDSIKADIKLILGIHNLGGMGSYLGLPESLGGSKTKVFSFVRDRLQSRI 560
Query: 788 KGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKI 847
GW K LS+ GKE +IK+VA +P Y+MSC++LP+ + +AKFWW+S+ R +
Sbjct: 561 NGWSAKFLSKGGKEVMIKSVAATLPRYVMSCFRLPKAITSKLTSAVAKFWWSSNGDSRGM 620
Query: 848 HWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSIS 907
HWM W +L +K GGLGFR+ DFN ALL KQ WRL+ +SL + + K RYF +++
Sbjct: 621 HWMAWDKLCSSKSDGGLGFRNVDDFNSALLAKQLWRLITAPDSLFAKVFKGRYFRKSNPL 680
Query: 908 ITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVD 967
+ + P Y WRS++ AR LV +G+G ++ ++ D WIP P + VD
Sbjct: 681 DSIKSYSPSYGWRSMISARSLVYKGLIKRVGSGASISVWNDPWIPAQFPRPAKYGGSIVD 740
Query: 968 EDAVVADLIVHETRSWDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYSVR 1027
V LI + W+ + + F+ I ++PI +D + W + K+G Y+V+
Sbjct: 741 PSLKVKSLIDSRSNFWNIDLLKELFDPEDVPLISALPIGNPNMEDTLGWHFTKAGNYTVK 800
Query: 1028 SGHHLLCENKSKEVAESSSVRGSDIW---KQIWNFNGPRSAQNFLWRLASNILPTRCNLS 1084
SG+H ++ E +++ G D+ IW P ++FLW++ S +P NL
Sbjct: 801 SGYH----TARLDLNEGTTLIGPDLTTLKAYIWKVQCPPKLRHFLWQILSGCVPVSENLR 856
Query: 1085 KKGISLDQSCPLCNSGLEDLNHLFLHCPAAKAVWFSSPL----GIHIPPNSMCREWMELW 1140
K+GI D+ C C + E +NH C A+ +W S + GI P NS+ L+
Sbjct: 857 KRGILCDKGCVSCGASEESINHTLFQCHPARQIWALSQIPTAPGI-FPSNSIFTNLDHLF 915
Query: 1141 LKKDDPLAVQVFGITLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLA------NR 1194
+ + + +W +W+ RN+ +F+N DP I AV + + A R
Sbjct: 916 WRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDPMEILLLAVKEAQSWQEAQVELHSER 975
Query: 1195 KAACHPISRAPTRWCPPQTGTVKINVDAGVFTDGS---------TGWGFVARDHHGAVLF 1245
+ SR R T F DGS TGW ++ +
Sbjct: 976 HGSLSIDSRIRVRDVSQDTTFSGFR----CFIDGSWKASDQFSGTGWFCLSSLGESPTMG 1031
Query: 1246 SATRKEEMMVTPLVAERLALRWCLSWAEGEQFTSLCIETDAEQVVHCLLRRKKIAAIEFL 1305
+A + + +PL E AL W + G ++ TD +V + + A
Sbjct: 1032 AANVRRSL--SPLHTEMEALLWAMKCMIGADNQNVAFFTDCSDLVKMVSSPTEWPAFSVY 1089
Query: 1306 ILDCLDYLSRFSTCSVNFAGRSCNQVAHSLVGLAKTV-GNICWVGSVPQ 1353
+ + F+ S++ RS N A L +TV ++ +V ++P+
Sbjct: 1090 LEELQSDREEFTNFSLSLISRSANVKADKLARKIRTVPHHVTYVNNIPR 1138
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 669 bits (1725), Expect = 0.0
Identities = 407/1285 (31%), Positives = 650/1285 (49%), Gaps = 46/1285 (3%)
Query: 32 PQVVFLMETRLKSDEMERVRINCGFSSGLFVPCDGFGKERACDIALLWMDSVNLSIRSYS 91
P ++FLMET+ D + +V G+ V +G R+ +A+ W + + Y+
Sbjct: 7 PDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEG----RSGGLAIFWKSHLEIEFL-YA 61
Query: 92 LNHIMGRIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSLTPVEEDMWLCCGDFNDILS 151
++M ++ K W I+ +YG P + K W+ L S+ + W GDFNDI S
Sbjct: 62 DKNLMD-LQVSSRNKVWFISCVYGLPVTHMRPKLWEHLNSIGLKRAEAWCLIGDFNDIRS 120
Query: 152 NEEKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASD 211
N+EK GG RS + + +C++ +LG G FTW R+ + C+LDR F +
Sbjct: 121 NDEKLGGPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNRNDQW-VQCKLDRCFGNP 179
Query: 212 EFIKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVR 271
+ F L +FGSDH + ++ + ++ FR++K DD C ++
Sbjct: 180 AWFSIFPNAHQWFLEKFGSDHRPVLVKFT----NDNELFRGQFRYDKRLDDDPYCIEVIH 235
Query: 272 GSWNNA------TGLASKIEAMQSLDSKFKEYITSEIRKELLEIETQLNNHAS-----WD 320
SWN+A + S IE +++ S +K + + + + L+ S W
Sbjct: 236 RSWNSAMSQGTHSSFFSLIECRRAI-SVWKHSSDTNAQSRIKRLRKDLDAEKSIQIPCWP 294
Query: 321 GSPDNITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIK 380
+ ++ + S EE WRQ+SR WL GDKN+ FFHA N +
Sbjct: 295 -------RIEYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNELS 347
Query: 381 KIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRLSPEHVEWCNRSFS 440
+ D+ + K+ +F LFTS+ T + ++ +++ E + +
Sbjct: 348 FLLDENDQEFTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVT 407
Query: 441 PAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFI 500
E+ +A+ ++ APGPDG ALFFQ++W +V ++++ G G + N T I
Sbjct: 408 ELEVYNAVFSINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHI 467
Query: 501 ALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDN 560
LIPK +P + RPISLC+V+ KI++K + RLK LP I+ QSAFV RLI+DN
Sbjct: 468 CLIPKITSPQRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDN 527
Query: 561 AIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQC 620
++A E H ++ + K MA K DM+KAYDR+EW F+++M+ ++ F I+ I+ C
Sbjct: 528 ILVAHEMIHSLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNC 587
Query: 621 ISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRI 680
+++VSY +LINGQP P RG+RQGDPLSP LF+LC L +L K E+ KI GI+
Sbjct: 588 VTSVSYSVLINGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQF 647
Query: 681 ARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLN 740
+ HLLFADD LL +A+ +E + ++ L+ Y SGQ++NL+KS +++ +NV
Sbjct: 648 QDKKVSVNHLLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDI 707
Query: 741 HDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGK 800
K+ I R I +YLGLP SK+++F F++E++ ++ GW K LS+ GK
Sbjct: 708 QIKDWIKSRSGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGK 767
Query: 801 ETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKK 860
E L+K++A A+P Y+MSC+KLP+ C + ++ FWW S + KRKIHW+ W RL K
Sbjct: 768 EVLLKSIALALPVYVMSCFKLPKNLCQKLTTVMMDFWWNSMQQKRKIHWLSWQRLTLPKD 827
Query: 861 RGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPRYAWR 920
+GG GF+ FN+ALL KQ WR+L + SL S + +SRYF + G +P YAWR
Sbjct: 828 QGGFGFKDLQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWR 887
Query: 921 SLMKARELVENDAHWVIGNGRTVRIFKDNWI-PGTRCTPIQRTEGTVDEDAVVADLIVHE 979
S++ REL+ VIGNG+ ++ D W+ G+ P+ R ++ D V+ LI
Sbjct: 888 SILFGRELLMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRR-FINVDLKVSQLIDPT 946
Query: 980 TRSWDRERIMASFNSFIAKKIL-SIPISFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKS 1038
+R+W+ + F + IL P+ F+ +D W +G YSV++G+ L +
Sbjct: 947 SRNWNLNMLRDLFPWKDVEIILKQRPLFFK--EDSFCWLHSHNGLYSVKTGYEFLSKQVH 1004
Query: 1039 KEVAESSSVRGS--DIWKQIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPL 1096
+ + + V+ S ++ +IWN + + FLW+ +P L +GI D C +
Sbjct: 1005 HRLYQEAKVKPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLM 1064
Query: 1097 CNSGLEDLNHLFLHCPAAKAVWFSSPLG------IHIPPNSMCREWMELWLKKDDPLAVQ 1150
C++ E +NH+ CP A+ VW + L + +M R ++L + D P ++
Sbjct: 1065 CDTENETINHILFECPLARQVWAITHLSSAGSEFSNSVYTNMSR-LIDLTQQNDLPHHLR 1123
Query: 1151 -VFGITLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLANRKAACHPISRAPTRWC 1209
V LW LW+ RN L+F+ + A E+ A T+WC
Sbjct: 1124 FVSPWILWFLWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQTHMQNDEKHLKITKWC 1183
Query: 1210 PPQTGTVKINVD-AGVFTDGSTGWGFVARDHHGAVLFSATRKEEMMVTPLVAERLALRWC 1268
PP G +K N+ A +G +V RD G VL + R + +P A+ + W
Sbjct: 1184 PPLPGELKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSRRSFNEVHSPYSAKIRSWEWA 1243
Query: 1269 LSWAEGEQFTSLCIETDAEQVVHCL 1293
L F + + +++ L
Sbjct: 1244 LESMTHHHFDRVIFASSTHEIIQAL 1268
>At2g01840 putative non-LTR retroelement reverse transcriptase
Length = 1715
Score = 654 bits (1686), Expect = 0.0
Identities = 414/1386 (29%), Positives = 692/1386 (49%), Gaps = 80/1386 (5%)
Query: 2 TPMKLLSWNCRGLGNPRAIRALLRLIRIQNPQVVFLMETRLKSDEMERVRINCGFSSGLF 61
+PM++ WNC+GLG P +R L + R+ ++FL+ET+ + + + + GF
Sbjct: 361 SPMRVGFWNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGVKMGFEDMCI 420
Query: 62 VPCDGFGKERACDIALLWMDSVNLSIRSYSLNHIMGRIEDVESGKYWSITGIYGYPDETN 121
+ G + + W +++ + S+ + + +E Y S IYG+P +
Sbjct: 421 ISPRGLSG----GLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNFYLSC--IYGHPIPSE 474
Query: 122 KKKTWDLLRSLTPVEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNAVEDCNLLDL 181
+ W+ L+ ++ W+ CGDFN+IL+ EK GG RS L N + CN+ DL
Sbjct: 475 RHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCNMKDL 534
Query: 182 GFNGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIEL-- 239
G P++W R C LDRVF + ++ F + L GSDHA + I++
Sbjct: 535 KSKGNPYSWVGKRQNETIESC-LDRVFINSDWQASFPAFETEFLPIAGSDHAPVIIDIAE 593
Query: 240 DVCLEDAHKKKLHVFRFEKC-WADDDRCEAMVRGSWNNAT-----GLASKIEAMQSLDSK 293
+VC + FR+++ + +D +++ RG WN G K+ + +K
Sbjct: 594 EVCTKRGQ------FRYDRRHFQFEDFVDSVQRG-WNRGRSDSHGGYYEKLHCCRQELAK 646
Query: 294 FKEYITSEIRKELLEIETQLNNHASWDGSPDNITKFRELEAKHSELLQTEETMWRQRSRA 353
+K + +++ ++ +++ A D + + T R L ++ + EE W +SR
Sbjct: 647 WKRRTKTNTAEKIETLKYRVDA-AERDHTLPHQTILR-LRQDLNQAYRDEELYWHLKSRN 704
Query: 354 TWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNP 413
W+ GD+N+ FF+A K R N IK I D +G+ D + KV +YFA LFT++
Sbjct: 705 RWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTTTQT 764
Query: 414 TTVDQTCLVVKDRLSPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYI 473
+ ++ + +++ + +S + E++DA+ + +APG DG A F+ W +
Sbjct: 765 SDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGFTAAFYHHLWDL 824
Query: 474 VGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIA 533
+G++V + IN+T I LIPK +P + +RPISLC KI++K +
Sbjct: 825 IGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISKILI 884
Query: 534 NRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYD 593
RLK L +++ + Q+AFV G+ I+DN ++A E H +K + + + G +A+K D++KAYD
Sbjct: 885 KRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISKAYD 944
Query: 594 RIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPY 653
R+EW+F++ ++ + F + I+ C+++VSY++LING P + FP RG+RQGDPLSPY
Sbjct: 945 RVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPLSPY 1004
Query: 654 LFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISV 713
LF+ CA VLS +L+K E + +IHG++I ++ I+HLLFADD L F RAS + + + +
Sbjct: 1005 LFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRASNQNIEQLALI 1064
Query: 714 LNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKK 773
Y++ASGQ +N KS + + + + ++ + + + I V +YLGLP GR K
Sbjct: 1065 FKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKYLGLPEQLGRRKV 1124
Query: 774 EVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGML 833
E+F ++ +V ++ +GW LS AGKE +IKA+A A+P Y M+C+ LP C+ + ++
Sbjct: 1125 ELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEINSLI 1184
Query: 834 AKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMS 893
FWW + G LGF+ FN+ALL KQ WR+L + SL++
Sbjct: 1185 TAFWWGKE------------------NEGDLGFKDLHQFNRALLAKQAWRILTNPQSLLA 1226
Query: 894 SILKSRYFPRTSISITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPG 953
+ K Y+P T+ G Y W S+ + + L++ +G+G+T +I++D W+P
Sbjct: 1227 RLYKGLYYPNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGDGQTTKIWEDPWLP- 1285
Query: 954 TRCTPIQRTEGTV-DEDAVVADLIVHETRSWDRERIMASFNSFIAKKILSIPISFRLPDD 1012
P + G + DED VADL R WD N + S+ +S D
Sbjct: 1286 --TLPPRPARGPILDEDMKVADLWRENKREWDPVIFEGVLNPEDQQLAKSLYLSNYAARD 1343
Query: 1013 KVTWQWEKSGEYSVRSGHHLLCENKSKEVAESSSVRGSDIWKQ-IWNFNGPRSAQNFLWR 1071
W + ++ +Y+VRSG+ + E + + G KQ IW ++F+WR
Sbjct: 1344 SYKWAYTRNTQYTVRSGYWVATHVNLTEEEIINPLEGDVPLKQEIWRLKITPKIKHFIWR 1403
Query: 1072 LASNILPTRCNLSKKGISLDQSCPLCNSGLEDLNHLFLHCPAAKAVWFSSPLGIHIPPNS 1131
S L T L + I D +C C + E +NH+ C A+ VW S+ N
Sbjct: 1404 CLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANFS---GSNR 1460
Query: 1132 MC-----REWMELWL--KKDDPLAV----QVFGITLWRLWQGRNQLIFKNSPFDPALIAQ 1180
+C E + L L KK+ L + F I +WRLW+ RN+ +F+ P +AQ
Sbjct: 1461 LCFTDNLEENIRLILQGKKNQNLPILNGLMPFWI-MWRLWKSRNEYLFQQLDRFPWKVAQ 1519
Query: 1181 SAVLLVEEF--NLANRKAACH--------PISRAPTRWCPPQTGTVKINVDAGVFTDG-- 1228
A E+ + N A H P+SR+ +W P G +K N D+G + G
Sbjct: 1520 KAEQEATEWVETMVNDTAISHNTAQSNDRPLSRS-KQWSSPPEGFLKCNFDSG-YVQGRD 1577
Query: 1229 --STGWGFVARDHHGAVLFSATRKEEMMVTPLVAERLALRWCLSWAEGEQFTSLCIETDA 1286
STGW + RD +G VL S K + + L AE L L + + E D
Sbjct: 1578 YTSTGW--ILRDCNGRVLHSGCAKLQQSYSALQAEALGFLHALQMVWIRGYCYVWFEGDN 1635
Query: 1287 EQVVHCLLRRKKIAAIEFLILDCLDYLSRFSTCSVNFAGRSCNQVAHSLVGLAKTVGNIC 1346
++ + + + + +E L+ D ++++ S+ + R N A L A ++ ++
Sbjct: 1636 LELTNLINKTEDHHLLETLLYDIRFWMTKLPFSSIGYVNRERNLAADKLTKYANSMSSLY 1695
Query: 1347 WVGSVP 1352
VP
Sbjct: 1696 ETFHVP 1701
>At1g24640 hypothetical protein
Length = 1270
Score = 631 bits (1628), Expect = 0.0
Identities = 404/1222 (33%), Positives = 621/1222 (50%), Gaps = 83/1222 (6%)
Query: 75 IALLWMDSVNLSIRSYSLNHIMGRIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSLTP 134
+ALLW SV + ++ N + +++ + ++ +YG PD + + + W+ + +
Sbjct: 31 LALLWKSSVQVDLKFVDKNLMDAQVQF--GAVNFCVSCVYGDPDRSKRSQAWERISRIGV 88
Query: 135 VEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGR 194
D W GDFNDIL N EK GG RS L ++ C+L+++ +G FTW+ GR
Sbjct: 89 GRRDKWCMFGDFNDILHNGEKNGGPRRSDLDCKAFNEMIKGCDLVEMPAHGNGFTWA-GR 147
Query: 195 HGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVF 254
G I CRLDR F + E+ F L GSDH + I+L + +D+++ + F
Sbjct: 148 RGDHWIQCRLDRAFGNKEWFCFFPVSNQTFLDFRGSDHRPVLIKL-MSSQDSYRGQ---F 203
Query: 255 RFEKCWA-DDDRCEAMVR----GSWNNATGLASKIEAMQSLDSKFKEYITSEIRKELLEI 309
RF+K + +D EA++R G +A ++ A + S +K+ ++ ++
Sbjct: 204 RFDKRFLFKEDVKEAIIRTWSRGKHGTNISVADRLRACRKSLSSWKKQNNLNSLDKINQL 263
Query: 310 ETQLNNHAS--WDGSPDNITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFH 367
E L S W + L+ ++ + EE W+Q+SR WL+ G++NSK+FH
Sbjct: 264 EAALEKEQSLVWP----IFQRVSVLKKDLAKAYREEEAYWKQKSRQKWLRSGNRNSKYFH 319
Query: 368 AKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRL 427
A KQ + I+K+KD G +V YF LF SSNP+ + R+
Sbjct: 320 AAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAYFGNLFKSSNPSGFTDWFSGLVPRV 379
Query: 428 SPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILN 487
S E S EIK+A+ + P APGPDG+ ALFFQ YW VG++V S
Sbjct: 380 SEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMSALFFQHYWSTVGNQVTSEVKKFFA 439
Query: 488 EGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEE 547
+G N T + LIPK ++P+ RPISLC+V+ KI++K +A RL+P LPEI+ +
Sbjct: 440 DGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSVLYKIISKIMAKRLQPWLPEIVSDT 499
Query: 548 QSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSM 607
QSAFV RLITDN ++A E H +K + MA+K DM+KAYDR+EWS+++S+L S+
Sbjct: 500 QSAFVSERLITDNILVAHELVHSLKVHPRISSEFMAVKSDMSKAYDRVEWSYLRSLLLSL 559
Query: 608 NFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLK 667
F +N I+ C+S+V+Y +LIN P +RGLRQGDPLSP+LF+LC L+ LL
Sbjct: 560 GFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRGLRQGDPLSPFLFVLCTEGLTHLLN 619
Query: 668 KEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNL 727
K + + + GI+ + N P + HLLFADD L +AS E++ + +L Y +A+GQ +NL
Sbjct: 620 KAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKASREQSLVLQKILKVYGNATGQTINL 679
Query: 728 DKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKI 787
+KS +++ V K I + I T YLGLP F SK ++ ++++R+ +K+
Sbjct: 680 NKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLGLPECFSGSKVDMLHYLKDRLKEKL 739
Query: 788 KGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKI 847
W +CLS+ GKE L+K+VA A+P + MSC+KLP C+ +E +A FWW S ++ RKI
Sbjct: 740 DVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPITTCENLESAMASFWWDSCDHSRKI 799
Query: 848 HWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSIS 907
HW W RL K GGLGFR FN+ALL KQ WRLL + L+S +LKSRYF T
Sbjct: 800 HWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAWRLLHFPDCLLSRLLKSRYFDATDFL 859
Query: 908 ITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVD 967
+ +P + WRS++ REL+ +G+G ++ ++ D WI R D
Sbjct: 860 DAALSQRPSFGWRSILFGRELLSKGLQKRVGDGASLFVWIDPWIDDNGFRAPWRKNLIYD 919
Query: 968 EDAVVADLIVHETRSWDRERIMASFNSFIAKKILSI----PISFRLPDDKVTWQWEKSGE 1023
V L+ T WD E + + F+ + IL I P+ + D W+ KSG+
Sbjct: 920 VTLKVKALLNPRTGFWDEEVL---HDLFLPEDILRIKAIKPVISQA--DFFVWKLNKSGD 974
Query: 1024 YSVRSGHHLLCENKSKEVAESSSVRGSDIW--KQIWNFNGPRSAQNFLWRLASNILPTRC 1081
+SV+S + L + KS+ + S++ S + Q+WN + FLW+
Sbjct: 975 FSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWNLQTDPKIKIFLWK---------- 1024
Query: 1082 NLSKKGISLDQSCPLCNSGLEDLNHLFLHCPAAKAVWFSSPLGIHIPPN--------SMC 1133
+C E NH CP ++ +W S PP+ S
Sbjct: 1025 --------------VCGELGESTNHTLFLCPLSRQIWALS--DYPFPPDGFSNGSIYSNI 1068
Query: 1134 REWMELWLKKDDPLAV-QVFGITLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLA 1192
+E K+ P+ + ++F LWR+W+ RN IF+ + A V+ + + +
Sbjct: 1069 NHLLENKDNKEWPINLRKIFPWILWRIWKNRNSFIFEGISYP----ATDTVIKIRDDVVE 1124
Query: 1193 NRKAACHPISRAPTRWCPPQTGTVKI--NVDAGVFTDGSTGWGFVARDHHGAVLFSATRK 1250
+A C + + PP + V +V ++ W G VL + R
Sbjct: 1125 WFEAQC--LDGEGSALNPPLSNGVHFVGSVSENLWIKPPANW-------DGIVLLHSRRS 1175
Query: 1251 EEMMVTPLVAERLALRWCLSWA 1272
P+ ++ AL CL WA
Sbjct: 1176 ----FAPISSKADALLRCLLWA 1193
>At4g09710 RNA-directed DNA polymerase -like protein
Length = 1274
Score = 610 bits (1574), Expect = e-174
Identities = 419/1335 (31%), Positives = 643/1335 (47%), Gaps = 100/1335 (7%)
Query: 38 METRLKSDEMERVRINCGFSSGLFVPCDGFGKERACDIALLWMDSVNLSIRSYSLNHIMG 97
MET+ + + + + G++ +P +G +AL W ++V + I + N I
Sbjct: 1 METKNQDEFISKTFDWMGYAHRFTIPPEGLSG----GLALYWKENVEVEILEAAPNFI-- 54
Query: 98 RIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSLTPVEEDMWLCCGDFNDILSNEEKAG 157
N+ WD + SL WL GDFNDIL N EK G
Sbjct: 55 ----------------------DNRSVFWDKISSLGAQRSSAWLLTGDFNDILDNSEKQG 92
Query: 158 GNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRF 217
G +R R+ V L D+ G +W R+ S I RLDR + + + F
Sbjct: 93 GPLRWEGFFLAFRSFVSQNGLWDINHTGNSLSWRGTRY-SHFIKSRLDRALGNCSWSELF 151
Query: 218 SPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVRGSWNNA 277
+ +L GSDH + K+ FRF++ + + A+V+ W A
Sbjct: 152 PMSKCEYLRFEGSDHRPLVTYFGA----PPLKRSKPFRFDRRLREKEEIRALVKEVWELA 207
Query: 278 T--GLASKIEAMQSLDSKFKEYITSEIRKELLEIETQLNNHASWDGSPD-----NITKFR 330
+ KI + K+ + S K + + + L + S D PD +IT+
Sbjct: 208 RQDSVLYKISRCRQSIIKWTKEQNSNSAKAIKKAQQALESALSAD-IPDPSLIGSITQ-- 264
Query: 331 ELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWW 390
ELEA + + EE W+Q SR WL GD+N +FHA + R +N++ I+D G +
Sbjct: 265 ELEAAYRQ----EELFWKQWSRVQWLNSGDRNKGYFHATTRTRRMLNNLSVIEDGSGQEF 320
Query: 391 NGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRLSPEHVEWCNRSF----SPAEIKD 446
+ +++ + YF +FT+SN + + VV++ LSP CN S EIK+
Sbjct: 321 HEEEQIASTISSYFQNIFTTSNNSDLQ----VVQEALSPIISSHCNEELIKISSLLEIKE 376
Query: 447 AIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIALIPKC 506
A+ + KAPGPDG A FF YW I+ ++V + + +N+T + LIPK
Sbjct: 377 ALFSISADKAPGPDGFSASFFHAYWDIIEADVSRDIRSFFVDSCLSPRLNETHVTLIPKI 436
Query: 507 KNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIAME 566
P + +RPI+LCNV KIV K + RL+P L E++ QSAFV GR I DN +I E
Sbjct: 437 SAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLSELISLHQSAFVPGRAIADNVLITHE 496
Query: 567 CFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCISTVSY 626
H+++ K MA+K DM+KAYDRI+W+F++ +L + F + I ++QC+ TVSY
Sbjct: 497 ILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQEVLMRLGFHDKWIRWVMQCVCTVSY 556
Query: 627 QILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNAPK 686
LING P P RGLRQGDPLSPYLFILC VLSGL +K ++ + GIR+AR +P+
Sbjct: 557 SFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEVLSGLCRKAQEKGVMVGIRVARGSPQ 616
Query: 687 ITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKEII 746
+ HLLFADD + F + + + ++L Y+ ASGQ +NL KS +++S K +
Sbjct: 617 VNHLLFADDTMFFCKTNPTCCGALSNILKKYELASGQSINLAKSAITFSSKTPQDIKRRV 676
Query: 747 CQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLIKA 806
+ I +YLGLP FGR K+++FS + +R+ ++ W + LS AGK+ L+KA
Sbjct: 677 KLSLRIDNEGGIGKYLGLPEHFGRRKRDIFSSIVDRIRQRSHSWSIRFLSSAGKQILLKA 736
Query: 807 VAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGLGF 866
V ++P+Y M C+KLP C ++ +L +FWW S KRK+ W+ W +L GGLGF
Sbjct: 737 VLSSMPSYAMMCFKLPASLCKQIQSVLTRFWWDSKPDKRKMAWVSWDKLTLPINEGGLGF 796
Query: 867 RSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPRYA---WRSLM 923
R K WR+L + +SL+S +L +Y + S P +A WR ++
Sbjct: 797 REIE-------AKLSWRILKEPHSLLSRVLLGKYC--NTSSFMDCSASPSFASHGWRGIL 847
Query: 924 KARELVENDAHWVIGNGRTVRIFKDNWI-PGTRCTPIQRTEGTVDEDAVVADLIVHETRS 982
R+L+ W IG G ++ ++ + W+ P + TPI T ++D V DLI H+ +S
Sbjct: 848 AGRDLLRKGLGWSIGQGDSINVWTEAWLSPSSPQTPIGPPTET-NKDLSVHDLICHDVKS 906
Query: 983 WDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKSKEVA 1042
W+ E I + +I I I+ D + W KSGEY+ ++G+ L A
Sbjct: 907 WNVEAIRKHLPQY-EDQIRKITINALPLQDSLVWLPVKSGEYTTKTGYAL---------A 956
Query: 1043 ESSSVRGSDI---W-KQIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCN 1098
+ +S S + W K IW + ++FLW+ LP LS++ I + +C C
Sbjct: 957 KLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMKGALPVGEALSRRNIEAEVTCKRCG 1016
Query: 1099 SGLEDLNHLFLHCPAAKAVWFSSPLGIHIPPNSMCREWMELWLKKDDPLAVQVFGI---- 1154
E HL L CP AK VW +P+ + P + L + +A+ G+
Sbjct: 1017 Q-TESSLHLMLLCPYAKKVWELAPV-LFNPSEATHSSVALLLVDAKRMVALPPTGLGSAP 1074
Query: 1155 ----TLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLANRKAACHPISRAPTRWCP 1210
LW LW+ RN+LIF N + A+L + + + HP +P P
Sbjct: 1075 LYPWLLWHLWKARNRLIFDNHSCSEEGLVLKAILDARAW-MEAQLLIHHP---SPISDYP 1130
Query: 1211 PQTGTVKIN---VDAGVFTDGSTGWGFVARDHHGAVLFSATRKEEMMVTPLVAERLALRW 1267
T +K+ VDA T G G G+ +D + + + + L+AE LA+
Sbjct: 1131 SPTPNLKVTSCFVDAAWTTSGYCGMGWFLQDPYKVKIKENQSSSSFVGSALMAETLAVHL 1190
Query: 1268 CLSWAEGEQFTSLCIETDAEQVVHCLLRRKKIAAIEFLILDCLDYLSRFSTCSVNFAGRS 1327
L A L + +D ++++ L K I + L+ D + F+ F R
Sbjct: 1191 ALVDALSTGVRQLNVFSDCKELISLLNSGKSIVELRGLLHDIRELSVSFTHLCFFFIPRL 1250
Query: 1328 CNQVAHSLVGLAKTV 1342
N VA SL A +V
Sbjct: 1251 SNVVADSLAKSALSV 1265
>At2g05200 putative non-LTR retroelement reverse transcriptase
Length = 1229
Score = 594 bits (1532), Expect = e-169
Identities = 387/1207 (32%), Positives = 603/1207 (49%), Gaps = 45/1207 (3%)
Query: 147 NDILSNEEKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDR 206
N+IL N EK GG R R+ + L DL ++G PF+W R+ + RLDR
Sbjct: 36 NEILDNSEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSWRGMRY-DWFVRQRLDR 94
Query: 207 VFASDEFIKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVFRFEKCWADDDRC 266
+++ +++ F + +L GSDH + + +D +A K+ FRF+ D+D
Sbjct: 95 AMSNNSWLESFPSGRSEYLRFEGSDHRPLVVFVD----EARVKRRGQFRFDNRLRDNDVV 150
Query: 267 EAMVRGSWNNATGLASKIEAMQSLDSKFKEY--ITSEIRKELLEIETQLNNHASWDGSPD 324
A+++ +W NA G AS + M + + + + EL+E +TQ + P
Sbjct: 151 NALIQETWTNA-GDASVLTKMNQCRREIINWTRLQNLNSAELIE-KTQKALEEALTADPP 208
Query: 325 NITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKD 384
N T L A + EE W+QRSR WL GD+N+ +FHA + R N + ++D
Sbjct: 209 NPTTIGALTATLEHAYKLEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMED 268
Query: 385 DRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRLSPEHVEWCNRSFSPAEI 444
GV + ++ +++ YF +FTS + ++ +S ++ R + E+
Sbjct: 269 INGVAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEV 328
Query: 445 KDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIALIP 504
KDA+ ++ KAPGPDG A F+ YW+I+ ++V +N+T I LIP
Sbjct: 329 KDAVFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIP 388
Query: 505 KCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIA 564
K P +RPI+LCN+ KIV K + R++ ILP+++ E QSAFV GR+I+DN +I
Sbjct: 389 KDLGPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLIT 448
Query: 565 MECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCISTV 624
E H+++ + K MA+K DM+KAYDR+EW F+K +LQ F I+ +L+C+++V
Sbjct: 449 HEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSV 508
Query: 625 SYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNA 684
SY LING P + P RGLRQGDPLSP LFILC VLSGL + ++ ++ G+R++ N
Sbjct: 509 SYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSING 568
Query: 685 PKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKE 744
P++ HLLFADD + F+++ E + +L+ Y ASGQ +N KS V++S K
Sbjct: 569 PRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKG 628
Query: 745 IICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLI 804
+ + + I+ +YLGLP FGR K+++F + +++ +K W + LS+AGK+ ++
Sbjct: 629 QVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVML 688
Query: 805 KAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGL 864
KAV ++P Y MSC+KLP C ++ +L +FWW + RK W+ W +L K GGL
Sbjct: 689 KAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWSKLTNPKNAGGL 748
Query: 865 GFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPRYAWRSLMK 924
GFR N +LL K WRLL SL+S IL +Y +S K+ QP + WRS++
Sbjct: 749 GFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGWRSIIA 808
Query: 925 ARELVENDAHWVIGNGRTVRIFKDNWI----PGTRCTPIQRTEGTVDEDAVVADLIVHET 980
RE+++ W+I NG V I+ D W+ P P R +D V+ LI T
Sbjct: 809 GREILKEGLGWLITNGEKVSIWNDPWLSISKPLVPIGPALREH----QDLRVSALINQNT 864
Query: 981 RSWDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKSKE 1040
WD +I ++ I +P DK+ W KSG+Y+ RSG+ +
Sbjct: 865 LQWDWNKIAVILPNY-ENLIKQLPAPSSRGVDKLAWLPVKSGQYTSRSGYGI------AS 917
Query: 1041 VAESSSVRGSDIWK-QIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNS 1099
VA + W+ +W ++ +W+ A LP L ++ IS +C C +
Sbjct: 918 VASIPIPQTQFNWQSNLWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRCGA 977
Query: 1100 GLEDLNHLFLHCPAAKAVWFSSPL-GIHIPPNSMCREWMELWLKKDDPLAVQVFGITLWR 1158
E HLF HC A VW +PL +PP S + + L LKK + + G+T
Sbjct: 978 P-ESTTHLFFHCEFAAQVWELAPLQETTVPPGSSMLDALSL-LKK--AIILPPTGVTSAA 1033
Query: 1159 LWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLANRKAACHPISRAPTRWCPPQTGTVKI 1218
L+ + K A++ A + L + HPIS+ P ++G
Sbjct: 1034 LFPWICGIYGKLGTMTRAILDALAWQSAQRC-LPKTRNVVHPISQLPVL----RSGYFCF 1088
Query: 1219 NVDAGVFTDGS---TGWGF---VARDHHGAVLFSATRKEEMMVTPLVAERLALRWCLSWA 1272
VDA S +GW F A + A + R+ + + L AE A++ L A
Sbjct: 1089 -VDAAWIAQSSLAGSGWVFQSATALEKETATYSAGCRR---LPSALSAEAWAIKSALLHA 1144
Query: 1273 EGEQFTSLCIETDAEQVVHCLLRRKKIAAIEFLILDCLDYLSRFSTCSVNFAGRSCNQVA 1332
T L + +D++ VV L I I L+++ F + NF RS N +A
Sbjct: 1145 LQLGRTDLMVLSDSKSVVDALTSNISINEIYGLLMEIRALRVSFHSLCFNFISRSANAIA 1204
Query: 1333 HSLVGLA 1339
+ L+
Sbjct: 1205 DATAKLS 1211
>At3g31420 hypothetical protein
Length = 1491
Score = 587 bits (1513), Expect = e-167
Identities = 395/1335 (29%), Positives = 633/1335 (46%), Gaps = 119/1335 (8%)
Query: 34 VVFLMETRLKSDEMERVRINCGFSSGLFVPCDGFGKERACDIALLWMDSVNLSIRSYSLN 93
++ L ET+ + D + V GF + + VP DG + + W SV++ + + N
Sbjct: 211 IICLSETKQQDDRIRDVGAELGFCNHVTVPPDGLSG----GLVVFWNSSVDIFLCFSNSN 266
Query: 94 HIMGRIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSLTPVEEDM-WLCCGDFNDILSN 152
+ ++ E Y S +YG+P+ +++ W+ L L + W GDFN+ILSN
Sbjct: 267 LVDLHVKSNEGSFYLSF--VYGHPNPSHRHHLWERLERLNTTRQGTAWFIMGDFNEILSN 324
Query: 153 EEKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASDE 212
EK GG +R RN V CN DL G F+W+ G+ G + C LDR A++E
Sbjct: 325 REKRGGRLRPERTFQDFRNMVRGCNFTDLKSVGDRFSWA-GKRGDHHVTCSLDRTMANNE 383
Query: 213 FIKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVRG 272
+ F + + SDH + + E+ + F ++ + + +V
Sbjct: 384 WHTLFPESETVFMEYGESDHRPLVTNISAQKEE----RRGFFSYDSRLTHKEGFKQVVLN 439
Query: 273 SWNNATG-------LASKIEAMQSLDSKFKEYITSEIRKELLEIETQLNNH-ASWDGSPD 324
W+ G L K+ + S++K+ + + I +L+ A+ +P
Sbjct: 440 QWHRRNGSFEGDSSLNRKLVECRQAISRWKKNNRVNAEERIKIIRHKLDRAIATGTATP- 498
Query: 325 NITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKD 384
+ R++ ++ EE W+ +SR+ WL GD+N+++FH+ K R N + ++D
Sbjct: 499 --RERRQMRQDLNQAYADEEIYWQTKSRSRWLNAGDRNTRYFHSTTKTRRCRNRLLSVQD 556
Query: 385 DRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLV--VKDRLSPEHVEWCNRSFSPA 442
G G + + KV ++YF L+ S+ T++ + + +++ E E R +
Sbjct: 557 SDGDICRGDENIAKVAINYFDDLYKSTPNTSLRYADVFQGFQQKITDEINEDLIRPVTEL 616
Query: 443 EIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIAL 502
EI++++ + P + P PDG A F+Q++W + +V+ + E N T + L
Sbjct: 617 EIEESVFSVAPSRTPDPDGFTADFYQQFWPDIKQKVIDEVTRFFERSELDERHNHTNLCL 676
Query: 503 IPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAI 562
IPK + P++ +FRPI+LCNV KI++K + NRLK L + E Q+AFV GRLIT+NAI
Sbjct: 677 IPKVETPTTIAKFRPIALCNVSYKIISKILVNRLKKHLGGAITENQAAFVPGRLITNNAI 736
Query: 563 IAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCIS 622
IA E ++ +K + + MA+K D+ KAYDR+EW F++ ++ M F I I+ C++
Sbjct: 737 IAHEVYYALKARKRQANSYMALKTDITKAYDRLEWDFLEETMRQMGFNTKWIERIMICVT 796
Query: 623 TVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIAR 682
V + +LING P PERG+R GDPLSPYLFILCA VLS ++K+ E + K+ GIR++
Sbjct: 797 MVRFSVLINGSPHGTIKPERGIRHGDPLSPYLFILCAEVLSHMIKQAEINKKLKGIRLST 856
Query: 683 NAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHD 742
P I+HLLFADD + F A+ I E R + +
Sbjct: 857 QGPFISHLLFADDSIFFTLANQRSCTAI-------------------KEPDTKRRMRH-- 895
Query: 743 KEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKET 802
+ I +YLGLP F + KKE+F+++ E+V K +GW +K LS+ GKE
Sbjct: 896 ------LLGIHNEGGEGKYLGLPEQFNKKKKELFNYIIEKVKDKTQGWSKKFLSQGGKEV 949
Query: 803 LIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRG 862
L+KAVA A+P Y M+ +KL + C+ ++ +LA+FWW+S + +HW W R+ KK G
Sbjct: 950 LLKAVALAMPVYSMNIFKLTKEVCEEIDSLLARFWWSSGNETKGMHWFTWKRMSIPKKEG 1009
Query: 863 GLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPRYAWRSL 922
GLGF+ +FN ALLGKQ W LL N LM+ +L+ RYFP T++ G + + W+S+
Sbjct: 1010 GLGFKELENFNLALLGKQTWHLLQHPNCLMARVLRGRYFPETNVMNAVQGRRASFVWKSI 1069
Query: 923 MKARELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVDEDAVVADLIVHETRS 982
+ R L++ +G+G + + D W+P +H R
Sbjct: 1070 LHGRNLLKKGLRCCVGDGSLINAWLDPWLP------------------------LHSPR- 1104
Query: 983 WDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKSKEVA 1042
A + A + L + + R DD + W + K G Y+V+S + L
Sbjct: 1105 -------APYKQEDAPEQLLVCSTAR--DDLIGWHYTKDGMYTVKSAYWLATHLPG--TT 1153
Query: 1043 ESSSVRGSDIWKQ-IWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNSGL 1101
+ G KQ +W ++F W++ S + T L + I+ C C
Sbjct: 1154 GTHPPPGDIKLKQLLWKTKTAPKIKHFCWKILSGAIATGEMLRYRHINKQSICKRCCRDE 1213
Query: 1102 EDLNHLFLHCPAAKAVWFSSPLGIHIPPNSMCREWMELWLKKDDPLAV----------QV 1151
E HLF C AKA W + L PN + ++ + +K + Q+
Sbjct: 1214 ETSQHLFFECDYAKATWRGAGL-----PNLIFQDSIVTLEEKFRAMFTFNPSTTNYWRQL 1268
Query: 1152 FGITLWRLWQGRNQLIFKNSPFDPALIAQSAVL-LVEEFNLANRKAACHPISR------A 1204
LWRLW+ RN L F+ + Q A +E ++ +R +P+SR A
Sbjct: 1269 PFWILWRLWRSRNILTFQQKHIPWEVTVQLAKQDALEWQDIEDRVQVINPLSRRHSNRYA 1328
Query: 1205 PTRWCPPQTGTVKINVDAGVFTDGSTGWGFVARDHHGAVLFSATRK----EEMMVTPLVA 1260
RW P G K N D T ++ G+V RD HG + K + + L A
Sbjct: 1329 ANRWTRPVCGWKKCNYDGSYSTIINSKAGWVIRDEHGQFIGGGQAKGKHTNNALESALQA 1388
Query: 1261 ERLALRWCLSWAEGEQFTSLCIETDAEQVVHCLLRRKKIAAIEFLILDCLDYLSRFSTCS 1320
+A++ C W+ G T +C E D +V L K + I D + RF C
Sbjct: 1389 LIIAMQSC--WSHGH--TKVCFEGDNIEVYQILNEGKARFDVYNWIRDIQAWKRRFQECR 1444
Query: 1321 VNFAGRSCNQVAHSL 1335
+ R N+ A +L
Sbjct: 1445 FLWINRRNNKPADTL 1459
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 583 bits (1504), Expect = e-166
Identities = 373/1283 (29%), Positives = 614/1283 (47%), Gaps = 58/1283 (4%)
Query: 75 IALLWMDSVNLSIRSYSLNHIMGRIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSLTP 134
+A+ W + + + N + ++ + K W ++ +YG P + D L S+
Sbjct: 31 LAIFWKNHLEIDFLFEDKNLLDLKVS--QGKKSWFVSCVYGNPVLHLRYLLLDKLSSIGV 88
Query: 135 VEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGR 194
W GDFNDILSN+ K GG R +N + +C++ +G +G FTW R
Sbjct: 89 QRNSAWCMIGDFNDILSNDGKLGGPSRLISSFQPFKNMLLNCDMHQMGSSGNSFTWGGTR 148
Query: 195 HGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVF 254
+ I C+LDR F + E+ FS L + GS H + + V ++ + + F
Sbjct: 149 NDQW-IQCKLDRCFGNSEWFTMFSNSHQWFLEKLGSHHRPVLVNF-VNDQEVFRGQ---F 203
Query: 255 RFEKCWADDDRCEAMVRGSW--NNATGLASKIEAM---QSLDSKFKEYITSEIRKELLEI 309
++K +A+D +C A SW N + ++S + M + S +K+ + +L +
Sbjct: 204 CYDKRFAEDPQCAASTLSSWIGNGISDVSSSMLRMVKCRKAISGWKKNSDFNAQNRILRL 263
Query: 310 ETQLNNHAS-----WDGSPDNITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSK 364
++L+ S W ++ ++ + + EE+ WR +S+ WL GD+NSK
Sbjct: 264 RSELDEEKSKQYPCW-------SRISVIQTQLGVAFREEESFWRLKSKDKWLFGGDRNSK 316
Query: 365 FFHAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVK 424
FF A K NS++ + D+ G + + YF LF SS P K
Sbjct: 317 FFQAMVKANRTKNSLRFLVDENGNEHTLNREKGNIASVYFENLFMSSYPANSQSALDGFK 376
Query: 425 DRLSPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALG 484
R+S E + ++ + EI A+ ++ AP +K GS+ + + LG
Sbjct: 377 TRVSEEMNQELTQAVTELEIHSAVFSINVESAP----------EKLECCQGSDYIEI-LG 425
Query: 485 ILNEGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIM 544
G + N T + LIPK NP + RPISLC+V+ KI++K ++ +LK LP I+
Sbjct: 426 FFETGVLPQEWNHTHLYLIPKFTNPQRMSDIRPISLCSVLYKIISKILSFKLKKHLPSIV 485
Query: 545 DEEQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSML 604
QSAF RLI+DN +IA E H ++ K K M K DM+KAYDR+EWSF++ +L
Sbjct: 486 SPSQSAFFAERLISDNILIAHEIVHSLRTNDKISKEFMVFKTDMSKAYDRVEWSFLQEIL 545
Query: 605 QSMNFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSG 664
++ F + I+ I+ C+++V+Y +LINGQ PERG+RQGDP+SP+LF+LC L
Sbjct: 546 VALGFNDKWISWIMGCVTSVTYSVLINGQHFGHITPERGIRQGDPISPFLFVLCTEALIH 605
Query: 665 LLKKEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQI 724
+L++ E K+ GI+ + P + HLLF DD L RA+ + + ++ L+ Y SGQ+
Sbjct: 606 ILQQAENSKKVSGIQFNGSGPSVNHLLFVDDTQLVCRATKSDCEQMMLCLSQYGHISGQL 665
Query: 725 VNLDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVW 784
+N++KS +++ V K I R I +YLGLP SK+++F +++E++
Sbjct: 666 INVEKSSITFGVKVDEDTKRWIKNRSGIHLEGGTGKYLGLPENLSGSKQDLFGYIKEKLQ 725
Query: 785 KKIKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYK 844
+ GW +K LS+ GKE L+K++A A+P YIM+C++LP+G C + ++ FWW S E+
Sbjct: 726 SHLSGWYDKTLSQGGKEILLKSIALALPVYIMTCFRLPKGLCTKLTSVMMDFWWNSMEFS 785
Query: 845 RKIHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRT 904
KIHW+ +L K GG GF+ FN+ALL KQ WRL +D+ S++S I KSRYF T
Sbjct: 786 NKIHWIGGKKLTLPKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSIVSQIFKSRYFMNT 845
Query: 905 SISITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEG 964
+ G +P Y WRS++ REL+ +IGNG ++ D W+
Sbjct: 846 DFLNARQGTRPSYTWRSILYGRELLNGGLKRLIGNGEQTNVWIDKWLFDGHSRRPMNLHS 905
Query: 965 TVDEDAVVADLIVHETRSWDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEY 1024
++ V+ LI TR+W+ +++ F+ + I+ +D W +G Y
Sbjct: 906 LMNIHMKVSHLIDPLTRNWNLKKLTELFHEKDVQLIMH-QRPLISSEDSYCWAGTNNGLY 964
Query: 1025 SVRSGHHLLCENKSKEVAESSSVRGS--DIWKQIWNFNGPRSAQNFLWRLASNILPTRCN 1082
+V+SG+ K + + + V S ++ ++W+ + F+W+ L
Sbjct: 965 TVKSGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVFMWKALKGALAVEDR 1024
Query: 1083 LSKKGISLDQSCPLCNSGLEDLNHLFLHCPAAKAVWFSSPL---------GIHIPPNSMC 1133
L +GI C C +E +NHL CP A+ VW S + I N +
Sbjct: 1025 LRSRGIRTADGCLFCKEEIETINHLLFQCPFARQVWALSLIQAPATGFGTSIFSNINHVI 1084
Query: 1134 REWMELWLKKDDPLAVQVFGITLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNL-- 1191
+ + + V LW +W+ RN+ +F+ + + I A EE NL
Sbjct: 1085 QNSQNFGIPRH---MRTVSPWLLWEIWKNRNKTLFQGTGLTSSEIVAKA---YEECNLWI 1138
Query: 1192 -ANRKAACHPISRAPTRWCPPQTGTVKINVDAGVFTDGS-TGWGFVARDHHGAVLFSATR 1249
A K++ +S + +W PP G +K N+ G +V RD G VL + R
Sbjct: 1139 NAQEKSS-GGVSPSEHKWNPPPAGELKCNIGVAWSRQKQLAGVSWVLRDSMGQVLLHSRR 1197
Query: 1250 KEEMMVTPLVAERLALRWCLSWAEGEQFTSLCIETDAEQVVHCLLRRKKIAAIEFLILDC 1309
+ + A+ + W L + F + + ++ L + + + I +
Sbjct: 1198 SYSQVYSLFDAKIKSWDWALESMDHFHFDKVTFAATSHDIIKALHKPNEWPMLIGHIAEF 1257
Query: 1310 LDYLSRFSTCSVNFAGRSCNQVA 1332
L + S + CN A
Sbjct: 1258 LSFTKDISDWFMMMESTQCNNGA 1280
>At4g10830 putative protein
Length = 1294
Score = 581 bits (1498), Expect = e-166
Identities = 324/937 (34%), Positives = 506/937 (53%), Gaps = 17/937 (1%)
Query: 12 RGLGNPRAIRALLRLIRIQNPQVVFLMETRLKSDEMERVRINCGFSSGLFVPCDGFGKER 71
+G+G P L L ++ V+FL+ET K + + + GF + + P G
Sbjct: 370 KGIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQG----H 425
Query: 72 ACDIALLWMDSVNLSIRSYSLNHIMGRIEDVESGKYWSITGIYGYPDETNKKKTWDLLRS 131
+ +ALLW DSV LS HI I Y ++ +YG+P ++ + W +
Sbjct: 426 SGGLALLWKDSVRLSNLYQDDRHIDVHISINNINFY--LSRVYGHPCQSERHSLWTHFEN 483
Query: 132 LTPVEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWS 191
L+ D W+ GDFN+ILSN EK GG R RN V C+L D+ G F+W
Sbjct: 484 LSKTRNDPWILIGDFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWV 543
Query: 192 NGRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKL 251
RH S + C LDR F + E F ++ L GSDH + + L E +K+
Sbjct: 544 GERH-SHTVKCCLDRAFINSEGAFLFPFAELEFLEFTGSDHKPLFLSL----EKTETRKM 598
Query: 252 HVFRFEKCWADDDRCEAMVRGSWNNATG-----LASKIEAMQSLDSKFKEYITSEIRKEL 306
FRF+K + + V+ WN A L ++ + +K K R +
Sbjct: 599 RPFRFDKRLLEVPHFKTYVKAGWNKAINGQRKHLPDQVRTCRQAMAKLKHKSNLNSRIRI 658
Query: 307 LEIETQLNNHASWDGSPDNITKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFF 366
+++ L+ S + T ++ + + + EE W+Q+SR W+KEGD+N++FF
Sbjct: 659 NQLQAALDKAMSSVNRTERRT-ISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFF 717
Query: 367 HAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDR 426
HA K R +N + IKD+ G+ + G ++ ++F ++ S+ K
Sbjct: 718 HACTKTRFSVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPI 777
Query: 427 LSPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGIL 486
++ + + + S EI +AI + KAPGPDGL A F++ W IVG +V+
Sbjct: 778 VTEQINDDLTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFF 837
Query: 487 NEGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDE 546
+ IN T I +IPK NP + + +RPI+LCNV+ KI++K + RLK L I+ +
Sbjct: 838 RTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSD 897
Query: 547 EQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQS 606
Q+AF+ GRL+ DN +IA E H +K + + + MA+K D++KAYDR+EW+F+++ ++
Sbjct: 898 SQAAFIPGRLVNDNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRL 957
Query: 607 MNFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLL 666
F E I I+ + +V+Y +L+NG P P+RG+RQGDPLSPYLFILCA++L+ L+
Sbjct: 958 FGFSETWIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLI 1017
Query: 667 KKEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVN 726
K + I GIRI P +THL FADD L F +++V Q + V + Y+ SGQ +N
Sbjct: 1018 KNRVAEGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKIN 1077
Query: 727 LDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKK 786
+ KS +++ V + + + I++ +YLGLP FGR K+++F+++ ERV K+
Sbjct: 1078 MSKSMITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKR 1137
Query: 787 IKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRK 846
W K LS AGKE ++K+VA ++P Y MSC+KLP +E +L FWW + KR+
Sbjct: 1138 TSSWSAKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKNAKKRE 1197
Query: 847 IHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSI 906
I W+ W RL +KK GGLGFR + FN ALL KQ WR++ + NSL + I+K+RYF SI
Sbjct: 1198 IPWIAWKRLQYSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARYFREDSI 1257
Query: 907 SITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTV 943
K Y W S++ ++++ + +++G+G+TV
Sbjct: 1258 LDAKRQRYQSYGWTSMLAGLDVIKKGSRFIVGDGKTV 1294
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 570 bits (1469), Expect = e-162
Identities = 389/1330 (29%), Positives = 625/1330 (46%), Gaps = 74/1330 (5%)
Query: 34 VVFLMETRLKSDEMERVRINCGFSSGLFVPCDGFGKERACDIALLWMDSVNLSIRSYSLN 93
V+ + ET D+ R+ GF + V G + + LLW + S +
Sbjct: 596 VLAIFETHAGGDQASRICQGLGFENSFRVDAVG----HSGGLWLLWRTGIGEVSVVDSTD 651
Query: 94 HIMGRIEDVESGKYWSITGIYGYPDETNKKKTWDLLRSLTPVEEDMWLCCGDFNDILSNE 153
+ +DV ++ +Y P + + WD L + + + GDFN I+ +
Sbjct: 652 QFI-HAKDVNGKDNVNLVVVYAAPTASRRSGLWDRLGDVIRSMDGPVVIGGDFNTIVRLD 710
Query: 154 EKAGGNIRSFLQLSLSRNAVEDCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASDEF 213
E++GGN R + D +L+DLGF G FTW GR + RLDRV
Sbjct: 711 ERSGGNGRLSSDSLAFGEWINDHSLIDLGFKGNKFTWKRGREERFFVAKRLDRVLCCAHA 770
Query: 214 IKRFSPIQINHLARFGSDHAAISIELDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVRGS 273
++ + HL SDHA + ++L E + + FRFE W + ++ S
Sbjct: 771 RLKWQEASVLHLPFLASDHAPLYVQLTP--EVSGNRGRRPFRFEAAWLSHPGFKELLLTS 828
Query: 274 WNNATGLASKIEAMQSLDSKFKEYITSEIRKELLEIETQLNNHASWDGSPDNITKFRELE 333
WN K+ T E L+++ L+ H S D + K EL
Sbjct: 829 WN-------------------KDISTPEA----LKVQELLDLHQS----DDLLKKEEELL 861
Query: 334 AKHSELLQTEETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNGR 393
+L+ EE +W Q+SR W GD+N+KFFH R + N I+ ++D+ G W +
Sbjct: 862 KDFDVVLEQEEVVWMQKSREKWFVHGDRNTKFFHTSTIIRRRRNQIEMLQDNDGRWLSNA 921
Query: 394 DKVEKVLVDYFAGLFTSSN-PTTVDQTCLVVKDRLSPEHVEWCNRSFSPAEIKDAIDQMH 452
++E +DY+ L++ + V+Q LS + FSP E++ AI M
Sbjct: 922 QELETHAIDYYKRLYSLDDLDAVVEQLPQEGFTALSEADFSSLTKPFSPLEVEGAIRSMG 981
Query: 453 PLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSP 512
KAPGPDG +F+Q+ W +VG V + + G + N + LI K P
Sbjct: 982 KYKAPGPDGFQPVFYQQGWEVVGESVTKFVMDFFSSGSFPQETNDVLVVLIAKVLKPEKI 1041
Query: 513 NQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMK 572
QFRPISLCNV+ K +TK + RLK ++ +++ Q++F+ GRL TDN ++ E H M+
Sbjct: 1042 TQFRPISLCNVLFKTITKVMVGRLKGVINKLIGPAQTSFIPGRLSTDNIVVVQEVVHSMR 1101
Query: 573 KKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILING 632
+K KG KG M +KLD+ KAYDRI W ++ L++ P + I++C+ S ++L NG
Sbjct: 1102 RK-KGVKGWMLLKLDLEKAYDRIRWDLLEDTLKAAGLPGTWVQWIMKCVEGPSMRLLWNG 1160
Query: 633 QPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLF 692
+ + F P RGLRQGDPLSPYLF+LC L L++ K I+I+++ P+++H+ F
Sbjct: 1161 EKTDAFKPLRGLRQGDPLSPYLFVLCIERLCHLIESSIAAKKWKPIKISQSGPRLSHICF 1220
Query: 693 ADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINI 752
ADD +LFA AS+++ + + VL + ASGQ V+L+KS++ +S+NVL + I + +
Sbjct: 1221 ADDLILFAEASIDQIRVLRGVLEKFCGASGQKVSLEKSKIYFSKNVLRDLGKRISEESGM 1280
Query: 753 KTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIP 812
K +YLG+P++ R KE F V +R ++ GWK + LS AG+ TL KAV +I
Sbjct: 1281 KATKDLGKYLGVPILQKRINKETFGEVIKRFSSRLAGWKGRMLSFAGRLTLTKAVLTSIL 1340
Query: 813 NYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDF 872
+ MS KLP+ D ++ + F W S K+K H + W R+ ++ GGLG RS +
Sbjct: 1341 VHTMSTIKLPQSTLDGLDKVSRAFLWGSTLEKKKQHLVAWTRVCLPRREGGLGIRSATAM 1400
Query: 873 NKALLGKQYWRLLADNNSLMSSILKSRY----FPRTSISITKVGFQPRYAWRSL-MKARE 927
NKAL+ K WR+L D +SL + +++S+Y + ++ K + WRS+ + R+
Sbjct: 1401 NKALIAKVGWRVLNDGSSLWAQVVRSKYKVGDVHDRNWTVAKSNWSS--TWRSVGVGLRD 1458
Query: 928 LVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVDEDAVVADLIVHETRSWDRER 987
++ + HWVIG+GR +R + D W+ T ++ + A + + WD +
Sbjct: 1459 VIWREQHWVIGDGRQIRFWTDRWLSETPIADDSIVPLSLAQMLCTARDLWRDGTGWDMSQ 1518
Query: 988 IMASFNSFIAKKILSIPI-SFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKSKEVAESSS 1046
I +L++ + S D++ W G ++V+S +L + S SS
Sbjct: 1519 IAPFVTDNKRLDLLAVIVDSVTGAHDRLAWGMTSDGRFTVKSAFAMLTNDDSPRQDMSS- 1577
Query: 1047 VRGSDIWKQIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNSGLEDLNH 1106
++ ++W P + FLW + + + T ++ + C +C G+E + H
Sbjct: 1578 -----LYGRVWKVQAPERVRVFLWLVVNQAIMTNSERKRRHLCDSDVCQVCRGGIESILH 1632
Query: 1107 LFLHCPAAKAVWFSSPLGIHIPPNSMCREWMEL----WLKKDDPLAVQ--------VFGI 1154
+ CPA +W I P + + + + WL + + +F +
Sbjct: 1633 VLRDCPAMSGIW------DRIVPRRLQQSFFTMSLLEWLYSNLRQGLMTEGSDWSTMFAM 1686
Query: 1155 TLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLANRKAACHPIS---RAPTRWCPP 1211
+W W+ R IF + + L VE +R+ P RW PP
Sbjct: 1687 AVWWGWKWRCSNIFGENKTCRDRVRFIKDLAVEVSIAYSREVELRLSGLRVNKPIRWTPP 1746
Query: 1212 QTGTVKINVD-AGVFTDGSTGWGFVARDHHGAVLFSATRKEEMMVTPLVAERLALRWCLS 1270
G KIN D A G G V R+ GA PL AE + + L
Sbjct: 1747 MEGWYKINTDGASRGNPGLASAGGVLRNSAGAWCGGFAVNIGRCSAPL-AELWGVYYGLY 1805
Query: 1271 WAEGEQFTSLCIETDAEQVVHCLLRR-KKIAAIEFLILDCLDYLSRFSTCSVNFAGRSCN 1329
A +Q T L +E D+E VV L + + FL+ C ++LS+ T ++ R N
Sbjct: 1806 MAWAKQLTHLELEVDSEVVVGFLKTGIGETHPLSFLVRLCHNFLSKDWTVRISHVYREAN 1865
Query: 1330 QVAHSLVGLA 1339
+A L A
Sbjct: 1866 SLADGLANHA 1875
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 538 bits (1385), Expect = e-152
Identities = 323/937 (34%), Positives = 490/937 (51%), Gaps = 31/937 (3%)
Query: 327 TKFRELEAKHSELLQTEETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDR 386
T+ L+ + + EE WR +SR W+ GDKNSKFF A K NS++ + D+
Sbjct: 45 TQISLLQDVLGDAYREEEDFWRLKSRDKWMVGGDKNSKFFQATVKANRVSNSLRFLVDEN 104
Query: 387 GVWWNGRDKVEKVLVDYFAGLFTSSNPTTVDQTCLVVKDRLSPEHVEWCNRSFSPAEIKD 446
G + K+ V +F LF+SS P+++D R++ + + + + EI
Sbjct: 105 GNEQTVNREKGKIAVTFFEDLFSSSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEIYK 164
Query: 447 AIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIALIPKC 506
A+ ++ APGPDG ALFFQ+ W +V ++++S G E N T + LIPK
Sbjct: 165 AVFSINAESAPGPDGFTALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKI 224
Query: 507 KNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIAME 566
P+ RPISLC+V+ KI++K ++ RLK LP I+ QSAFV RL++DN I+A E
Sbjct: 225 TKPARMADIRPISLCSVMYKIISKILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAHE 284
Query: 567 CFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCISTVSY 626
H ++ K K M K DM+KAYDR+EW F+K +L ++ F IN ++ C+S+VSY
Sbjct: 285 IVHNLRTNEKISKDFMVFKTDMSKAYDRVEWPFLKGILLALGFNSTWINWMMACVSSVSY 344
Query: 627 QILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNAPK 686
+LINGQP P RGLRQGDPLSP+LF+LC L +L + EK KI GI+ P
Sbjct: 345 SVLINGQPFGHITPHRGLRQGDPLSPFLFVLCTEALIHILNQAEKIGKISGIQFNGTGPS 404
Query: 687 ITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKEII 746
+ HLLFADD LL +AS E I+ L+ Y SGQ++N +KS +++ V K+ I
Sbjct: 405 VNHLLFADDTLLICKASQLECAEIMHCLSQYGHISGQMINSEKSAITFGAKVNEETKQWI 464
Query: 747 CQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLIKA 806
R I+T +YLGLP F SK+ +F F++E++ ++ GW K LS+ GK+ L+K+
Sbjct: 465 MNRSGIQTEGGTGKYLGLPECFQGSKQVLFGFIKEKLQSRLSGWYAKTLSQGGKDILLKS 524
Query: 807 VAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGLGF 866
+A A P Y M+C++L + C + ++ FWW S + K+KIHW+ +L K GG GF
Sbjct: 525 IAMAFPVYAMTCFRLSKTLCTKLTSVMMDFWWNSVQDKKKIHWIGAQKLMLPKFLGGFGF 584
Query: 867 RSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPRYAWRSLMKAR 926
+ FN+ALL KQ RL D++SL+S ILKSRY+ + G +P YAW+S++ R
Sbjct: 585 KDLQCFNQALLAKQASRLHTDSDSLLSQILKSRYYMNSDFLSATKGTRPSYAWQSILYGR 644
Query: 927 ELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVDEDAVVADLIVHETRSWDRE 986
EL+ + +IGNG ++ DNWI + + + VD V+ LI +R+W+
Sbjct: 645 ELLVSGLKKIIGNGENTYVWMDNWIFDDKPRRPESLQIMVDIQLKVSQLIDPFSRNWNLN 704
Query: 987 RIMASFNSFIAKKILSI----PISFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKSKEVA 1042
+ + F K+I I P++ R D W G Y+V+S + L K++
Sbjct: 705 MLR---DLFPWKEIQIICQQRPMASR--QDSFCWFGTNHGLYTVKSEYDLCSRQVHKQMF 759
Query: 1043 ESSSVRGS--DIWKQIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNSG 1100
+ + + S ++ +IWN N + FLW++ + L +G+ ++ C +C
Sbjct: 760 KEAEEQPSLNPLFGKIWNLNSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEK 819
Query: 1101 LEDLNHLFLHCPAAKAVWFSSPL---------GIHIPPNSMCREWMELWLKKDDPLAVQV 1151
E LNH+ CP A+ VW +P+ I N + L P V
Sbjct: 820 NETLNHILFQCPLARQVWALTPMQSPNHGFGDSIFTNVNHVIGNCHNTEL---SPHLRYV 876
Query: 1152 FGITLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLANRKAACHPISRAPTR---W 1208
+W LW+ RN+ +F+ I A+ +E+ L + C S+ PT+ W
Sbjct: 877 SPWIIWILWKNRNKRLFEGIGSVSLSIVGKALEDCKEW-LKAHELIC---SKEPTKDLTW 932
Query: 1209 CPPQTGTVKINVD-AGVFTDGSTGWGFVARDHHGAVL 1244
PP +K N+ A G +V R+ G VL
Sbjct: 933 IPPLMNELKCNIGIAWSKKHQMAGVSWVVRNWKGRVL 969
>At3g45550 putative protein
Length = 851
Score = 535 bits (1379), Expect = e-152
Identities = 293/801 (36%), Positives = 434/801 (53%), Gaps = 17/801 (2%)
Query: 437 RSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYIVGSEVVSLALGILNEGKSTECIN 496
+ F +EI +AI Q+ KAPGPDGL A F+++ W IVG++V+ +N
Sbjct: 47 QDFRDSEIFEAICQIGDDKAPGPDGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVN 106
Query: 497 KTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRL 556
T I +IPK +NP + + +RPI+LCNV+ K+++K + NRLK L I+ + Q+AF+ GR+
Sbjct: 107 HTNICMIPKIQNPQTLSDYRPIALCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRI 166
Query: 557 ITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINT 616
I DN +IA E H +K + + K MA+K D++KAYDR+EW F+++ ++ F + I
Sbjct: 167 INDNVMIAHEIMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGW 226
Query: 617 ILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIH 676
I+ + +V Y +LING P P RG+RQGDPLSPYLFILC ++LS L+K + I
Sbjct: 227 IMAAVKSVHYSVLINGSPHGYISPTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIR 286
Query: 677 GIRIARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSR 736
G+RI AP ITHL FADD L F +A+V Q + V + Y+ SGQ +N+ KS +++
Sbjct: 287 GVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGS 346
Query: 737 NVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLS 796
V + + +NI +YLGLP FGR KKE+F+++ +RV ++ W K LS
Sbjct: 347 RVYGSTQTRLKTLLNIPNQGGGGKYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLS 406
Query: 797 RAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLG 856
AGKE L+K+VA A+P Y MSC+KLP+G +E +L FWW KR I W+ W RL
Sbjct: 407 PAGKEILLKSVALAMPVYAMSCFKLPQGIVSEIESLLMNFWWEKASNKRGIPWVAWKRLQ 466
Query: 857 ETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPR 916
+KK GGLGFR + FN ALL KQ WR++ NSL + ++K+RYF SI K Q
Sbjct: 467 YSKKEGGLGFRDLAKFNDALLAKQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQS 526
Query: 917 YAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVDEDAVVADLI 976
Y W SL+ L+ +VIG+G+T+R+ DN + P+ E + +L
Sbjct: 527 YGWSSLLSGIALLRKGTRYVIGDGKTIRLGIDNVVDSHPPRPLLTDE--QHNGLSLDNLF 584
Query: 977 VH--ETRSWDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYSVRSGHHLLC 1034
H +R WD ++ + I I +S R D++ W + +G+Y+VRSG+ L
Sbjct: 585 QHRGHSRCWDNAKLQTFVDQSDHDYIKRIYLSTRSKTDRLIWSYNSTGDYTVRSGYWLST 644
Query: 1035 ENKSKEVAESSSVRGS-DIWKQIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQS 1093
+ S + + GS D+ +IWN ++FLWR+ S LPT L+ +G+ +D
Sbjct: 645 HDPSNTIPTMAKPHGSVDLKTKIWNLPIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPG 704
Query: 1094 CPLCNSGLEDLNHLFLHCPAAKAVWFSSPLGIH---IPPNSMCREWMELWLKKDDPLAVQ 1150
CP C E +NH CP A W S ++ I N++ + L +
Sbjct: 705 CPRCRRENESINHALFTCPFATMAWRLSDTPLYRSSILSNNIEDNISNILLLLQNTTITD 764
Query: 1151 VFGI----TLWRLWQGRNQLIFKNSPFDPALIAQSAVLLVEEFNLAN-----RKAACHPI 1201
+ LWR+W+ RN ++F N P++ A E+ A R+
Sbjct: 765 SQKLIPFWLLWRIWKARNNVVFNNLRESPSITVVRAKAETNEWLNATQTQGPRRLPKRTT 824
Query: 1202 SRAPTRWCPPQTGTVKINVDA 1222
+ T W PQ +K N DA
Sbjct: 825 AAGNTTWVKPQMPYIKCNFDA 845
>At2g11240 pseudogene
Length = 1044
Score = 524 bits (1350), Expect = e-148
Identities = 295/829 (35%), Positives = 451/829 (53%), Gaps = 43/829 (5%)
Query: 175 DCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAA 234
+C+L DL +G +W RH + CRLDR ++ + + + + +L GSDH
Sbjct: 3 ECDLYDLRHSGNFLSWRGKRHDHV-VHCRLDRALSNGAWAEDYPASRCIYLCFEGSDHRP 61
Query: 235 ISIELDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVRGSWNNATGLASKIEAMQSLDSKF 294
+ D+ + KKK VFR+++ ++D A+V+ +WN D+
Sbjct: 62 LLTHFDL----SKKKKKGVFRYDRRLKNNDEVTALVQEAWN-------------LYDTDI 104
Query: 295 KEYITSEIRKELLEIETQLNNHASWDGSPDNITKFRELEAK---HSELLQT--------- 342
E S R E+++ ++ +S +N K E + + ELL T
Sbjct: 105 VEEKISRCRLEIVKW-SRAKQQSSQKLIEENRQKLEEAMSSQDHNQELLSTINTNLLLAY 163
Query: 343 --EETMWRQRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVL 400
EE W+QRSR WL GDKNS +FHA + R IN I+ + GV + V+
Sbjct: 164 KAEEEYWKQRSRQLWLALGDKNSGYFHAITRGRTVINKFSVIEKEDGVPEYEEAGILNVI 223
Query: 401 VDYFAGLFTSSNPTTVDQTCLVVKDRLSPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPD 460
+YF LF+++ +K +SPE +P EIK A +H KAPGPD
Sbjct: 224 SEYFQKLFSANEGARAATIKEAIKPFISPEQ--------NPEEIKSACFSIHADKAPGPD 275
Query: 461 GLPALFFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSPNQFRPISL 520
G A FFQ W VG +V + INKT I LIPK ++ +RPI+L
Sbjct: 276 GFSASFFQSNWMTVGPNIVLEIQSFFSSSTLQPTINKTHITLIPKIQSLKRMVDYRPIAL 335
Query: 521 CNVVMKIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKG 580
C V KI++K ++ RL+PIL EI+ E QSAFV R DN +I E H++K K+
Sbjct: 336 CTVFYKIISKLLSRRLQPILQEIISENQSAFVPKRASNDNVLITHEALHYLKSLGAEKRC 395
Query: 581 VMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILINGQPSRRFFP 640
MA+K +M+KAYDRIEW F+K ++Q M F + I+ ILQCI+TVSY L+NG P
Sbjct: 396 FMAVKTNMSKAYDRIEWDFIKLVMQEMGFHQTWISWILQCITTVSYSFLLNGSAQGAVTP 455
Query: 641 ERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLFADDGLLFA 700
ERGLRQGDPLSP+LFI+C+ VLSGL +K + D + G+R+++ P++ HLLFADD + F
Sbjct: 456 ERGLRQGDPLSPFLFIICSEVLSGLCRKAQLDGSLLGLRVSKGNPRVNHLLFADDTIFFC 515
Query: 701 RASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSR 760
R+ ++ + + +L Y++ASGQ++N KS +++SR +H K Q + I+ V +
Sbjct: 516 RSDLKSCKTFLCILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQILGIQLVGGLGK 575
Query: 761 YLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYK 820
YLGLP +FGR K+++F+ + +R+ ++ W + LS AGK T++K+V ++P Y MSC+K
Sbjct: 576 YLGLPKMFGRKKRDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLASMPTYTMSCFK 635
Query: 821 LPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQ 880
L C ++ L FWW S K+K+ W+ W ++ + KK GGLGF+ ++FN ALL K
Sbjct: 636 LLVSLCKRIQSALTHFWWDSSADKKKMCWIAWSKMAKNKKEGGLGFKDITNFNDALLAKL 695
Query: 881 YWRLLADNNSLMSSILKSRYFPRTSISITKVGFQPRYAWRSLMKARELVENDAHWVIGNG 940
WR++ + ++ IL +Y +S V + WR + ++L+++ VIG+G
Sbjct: 696 SWRIVQSPSCVLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSG 755
Query: 941 RTVRIFKDNWIP-GTRCTPIQRTEGTVDEDAVVADLIVHETRSWDRERI 988
++ + W+ T TP+ + VA LI T+SWDRE++
Sbjct: 756 LDTLVWNEPWLSLSTSSTPMGPALEQF-KSMTVAQLICQTTKSWDREKV 803
Score = 43.9 bits (102), Expect = 6e-04
Identities = 53/228 (23%), Positives = 86/228 (37%), Gaps = 31/228 (13%)
Query: 1121 SPLGIHIPPNSMCREWMELWLKKDDPLAVQVFGITLWRLWQGRNQLIFKNSPFD-----P 1175
S L + +PP + + + +W+ LW LW RN+LIF+
Sbjct: 828 SKLLVTLPPIGIGQGQLPIWI--------------LWNLWNCRNKLIFEQKHISSMDLIS 873
Query: 1176 ALIAQSAVLLVEEFNLANRKAACHPISRAPTRWCPPQTGTVKINVDAG---VFTDGSTGW 1232
I+QS L + + K IS + T++ + DA GW
Sbjct: 874 QSISQSTEWLGAQIQASKSKIVIPGISPSEI-----DLDTIQCSTDASWREETLQAGFGW 928
Query: 1233 GFVARDHHGAVLFSATRKEEMMV-TPLVAERLALRWCLSWAEGEQFTSLCIETDAEQVVH 1291
FV +H L S + M + +PL+A+ AL + A F L + +D++Q+V
Sbjct: 929 VFVDHSNH---LESHHKAAAMNIRSPLLAKASALSLAIQHAADLGFKKLVVASDSQQLVK 985
Query: 1292 CLLRRKKIAAIEFLILDCLDYLSRFSTCSVNFAGRSCNQVAHSLVGLA 1339
L + ++ D F S +F R N A +L A
Sbjct: 986 VLNGEPHPMELHGIVFDISVLSLNFEENSFSFVKRENNSKADALAKAA 1033
>At2g31080 putative non-LTR retroelement reverse transcriptase
Length = 1231
Score = 523 bits (1346), Expect = e-148
Identities = 372/1252 (29%), Positives = 598/1252 (47%), Gaps = 81/1252 (6%)
Query: 113 IYGYPDETNKKKTWDLLRSLTPVEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNA 172
+Y P + + W L+ + E L GDFN IL +E+ GGN R +
Sbjct: 6 VYAAPSVSRRSGLWGELKDVVNGLEGPLLIGGDFNTILWVDERMGGNGRLSPDSLAFGDW 65
Query: 173 VEDCNLLDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDH 232
+ + +L+DLGF G FTW GR S + RLDRVF ++ ++HL SDH
Sbjct: 66 INELSLIDLGFKGNKFTWRRGRQESTVVAKRLDRVFVCAHARLKWQEAVVSHLPFMASDH 125
Query: 233 AAISIELDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVRGSWNNATGLASKIEAMQSLDS 292
A + ++ LE ++KL WN E +
Sbjct: 126 APLYVQ----LEPLQQRKLR--------------------KWNR--------EVFGDIHV 153
Query: 293 KFKEYITSEIRKELLEIETQLNNHASWDGSPDNITKFRELEAKHSEL-LQTEETMWRQRS 351
+ KE + ++I+ E++ L S D++ E+ K +L L+ EET+W Q+S
Sbjct: 154 R-KEKLVADIK----EVQDLLGVVLS-----DDLLAKEEVLLKEMDLVLEQEETLWFQKS 203
Query: 352 RATWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSS 411
R +++ GD+N+ FFH R + N I+ +K D W + ++E + + Y+ L++
Sbjct: 204 REKYIELGDRNTTFFHTSTIIRRRRNRIESLKGDDDRWVTDKVELEAMALTYYKRLYSLE 263
Query: 412 NPTTVDQTCLVVKDRLSPEHVEWCN--RSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQK 469
+ + V + L S E ++F+ AE+ A+ M KAPGPDG +F+Q+
Sbjct: 264 DVSEV-RNMLPTGGFASISEAEKAALLQAFTKAEVVSAVKSMGRFKAPGPDGYQPVFYQQ 322
Query: 470 YWYIVGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVT 529
W VG V L G N + LI K P QFRP+SLCNV+ KI+T
Sbjct: 323 CWETVGPSVTRFVLEFFETGVLPASTNDALLVLIAKVAKPERIQQFRPVSLCNVLFKIIT 382
Query: 530 KTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMA 589
K + RLK ++ +++ Q++F+ GRL DN ++ E H M++K KG+KG M +KLD+
Sbjct: 383 KMMVTRLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRK-KGRKGWMLLKLDLE 441
Query: 590 KAYDRIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDP 649
KAYDR+ W F++ L++ E + I+ ++ S +L NG+ + F P RGLRQGDP
Sbjct: 442 KAYDRVRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNGERTDSFVPARGLRQGDP 501
Query: 650 LSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQC 709
LSPYLF+LC L L++ + I ++ K++H+ FADD +LFA ASV + +
Sbjct: 502 LSPYLFVLCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASVAQIRI 561
Query: 710 IISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFG 769
I VL + +ASGQ V+L+KS++ +S NV +++I + I +YLG+P++
Sbjct: 562 IRRVLERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQK 621
Query: 770 RSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAV 829
R KE F V ERV ++ GWK + LS AG+ TL KAV +IP ++MS LP D +
Sbjct: 622 RMNKETFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTL 681
Query: 830 EGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNN 889
+ F W S K+K H + W ++ + K GG+G RS D NKAL+ K WRLL D
Sbjct: 682 DRYSRTFLWGSTMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKE 741
Query: 890 SLMSSILKSRYFPRTSISITKVGFQPRYA--WRSL-MKARELVENDAHWVIGNGRTVRIF 946
SL + +++ +Y + + QPR++ WRS+ + RE+V WV G+G T+R +
Sbjct: 742 SLWARVVRKKYKVGGVQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTIRFW 801
Query: 947 KDNWI---PGTRCTPIQRTEGTVDEDAVVADLIVHETRSWDRERIMASFNSFIAKKILSI 1003
D W+ P EG + V AD + + W+ E + + +++LS+
Sbjct: 802 LDRWLLQEPLVELGTDMIPEG--ERIKVAADYWLPGS-GWNLEILGLYLPETVKRRLLSV 858
Query: 1004 PISFRLPD-DKVTWQWEKSGEYSVRSGHHLLCENKSKEVAESSSVRGSDIWKQIWNFNGP 1062
+ L + D+++W+ + G ++VRS + LL +V + ++ + +IW P
Sbjct: 859 VVQVFLGNGDEISWKGTQDGAFTVRSAYSLL----QGDVGDRPNM--GSFFNRIWKLITP 912
Query: 1063 RSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNSGLEDLNHLFLHCPAAKAVWFS-S 1121
+ F+W ++ N++ T ++ +S + C +CN E + H+ CPA + +W
Sbjct: 913 ERVRVFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLL 972
Query: 1122 PLGIHIPPNSM-CREWMELWLKKDDPLAVQVFGITLWRLWQGRNQLIFKNSPFDPALIAQ 1180
PL H S EW+ + + +FG+ +W W+ R +F I +
Sbjct: 973 PLRRHHEFFSQSLLEWLFTNMDPVKGIWPTLFGMGIWWAWKWRCCDVFGERK-----ICR 1027
Query: 1181 SAVLLVEEFNLANRKAACHPISRAPT--------RWCPPQTGTVKINVD-AGVFTDGSTG 1231
+ +++ R+ + P RW P G VKI D A G
Sbjct: 1028 DRLKFIKDMAEEVRRVHVGAVGNRPNGVRVERMIRWQVPSDGWVKITTDGASRGNHGLAA 1087
Query: 1232 WGFVARDHHGAVLFSATRKEEMMVTPLVAERLALRWCLSWAEGEQFTSLCIETDAEQVVH 1291
G R+ G L PL AE + L A + F + ++ D + VV
Sbjct: 1088 AGGAIRNGQGEWLGGFALNIGSCAAPL-AELWGAYYGLLIAWDKGFRRVELDLDCKLVVG 1146
Query: 1292 CLLRRKKIA-AIEFLILDCLDYLSRFSTCSVNFAGRSCNQVAHSLVGLAKTV 1342
L A + FL+ C + +R V+ R N++A L A T+
Sbjct: 1147 FLSTGVSNAHPLSFLVRLCQGFFTRDWLVRVSHVYREANRLADGLANYAFTL 1198
>At2g17610 putative non-LTR retroelement reverse transcriptase
Length = 773
Score = 452 bits (1163), Expect = e-127
Identities = 231/623 (37%), Positives = 349/623 (55%), Gaps = 11/623 (1%)
Query: 556 LITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYDRIEWSFVKSMLQSMNFPENIIN 615
+ITDN +IA E H + K K + +A KLD+ KA+D+IEW F++++++ M F E N
Sbjct: 1 MITDNILIAHELIHSLHTK-KLVQPFVATKLDITKAFDKIEWGFIEAIMKQMGFSEKWCN 59
Query: 616 TILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPYLFILCANVLSGLLKKEEKDNKI 675
I+ CI+T +Y ILINGQP RR P+RG+RQGDP+SPYL++LC LS L++ K ++
Sbjct: 60 WIMTCITTTTYSILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKAKQL 119
Query: 676 HGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISVLNTYQDASGQIVNLDKSEVSYS 735
HG + +RN P I+HLLFA D L+F +A++EE +++VL Y+ ASGQ VN KS + +
Sbjct: 120 HGFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFG 179
Query: 736 RNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKKEVFSFVQERVWKKIKGWKEKCL 795
+ + E + Q + I RYLGLP GR+K FSF+ + + +K+ W K L
Sbjct: 180 KGLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYNKLL 239
Query: 796 SRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGMLAKFWWASDEYKRKIHWMRWGRL 855
S AGKE LIK++ AIP Y MSC+ LP + + FWW++ + K KI W+ W +L
Sbjct: 240 SPAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHKIPWVAWSKL 299
Query: 856 GETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMSSILKSRYFPRTSISITKVGFQP 915
+ KK GGL R DFN ALL KQ WR+L SLM+ + K++YFP+ + K Q
Sbjct: 300 NDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQS 359
Query: 916 RYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPGTRCTPIQRTEGTVDEDAVVADL 975
YAW+S++ +L+ ++ GNG ++++KDNW+P P T ++ V+DL
Sbjct: 360 SYAWKSILHGTKLISRGLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDSIYSQLKVSDL 419
Query: 976 IVHETRSWDRERIMASFNSFIAKKILSIPISFRLPDDKVTWQWEKSGEYSVRSGHHL--- 1032
++ W+ + + + I +I S +D +TW + G YSV+SG+HL
Sbjct: 420 LIE--GRWNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRK 477
Query: 1033 LCENKSKEVAESSSVRGSDIWKQIWNFNGPRSAQNFLWRLASNILPTRCNLSKKGISLDQ 1092
L + + + + V ++ IW N P ++F WR A N LPT NL ++ + D
Sbjct: 478 LSQQQHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDD 537
Query: 1093 SCPLCNSGLEDLNHLFLHCPAAKAVWFSSPL----GIHIPPNSMCREWMELW-LKKDDPL 1147
+C C ED+NHL C +K +W + + G + NS + + L +
Sbjct: 538 TCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSARK 597
Query: 1148 AVQVFGITLWRLWQGRNQLIFKN 1170
V +F WR+W+ RN LIF N
Sbjct: 598 DVSLFPFIGWRIWKMRNDLIFNN 620
>At1g25430 hypothetical protein
Length = 1213
Score = 421 bits (1083), Expect = e-117
Identities = 340/1214 (28%), Positives = 547/1214 (45%), Gaps = 76/1214 (6%)
Query: 6 LLSWNCRGLGNPRAIRALLRLIRIQNPQVVFLMETRLKSDEMERVRINCGFSSGLFVPCD 65
L WN RG N + ++ P ++ET +K + +R IN FV +
Sbjct: 5 LFCWNIRGFNNVSHRSGFKKWVKANKPIFGGVIETHVKQPK-DRKFINALLPGWSFV--E 61
Query: 66 GFGKERACDIALLWMDSVNLSIRSYSLNHIMGRIEDVESGKYWSITGIYGYPDETNKKKT 125
+ I ++W SV + + + SL I + S + ++ +Y + ++K+
Sbjct: 62 NYAFSDLGKIWVMWDPSVQVVVVAKSLQMITCEVLLPGSPSWIIVSVVYAANEVASRKEL 121
Query: 126 WDLLRSLTP---VEEDMWLCCGDFNDILSNEEKAGGNIRSFLQLSLSRNAVEDC----NL 178
W + ++ + + WL GDFN +L+ +E + L + ++ DC L
Sbjct: 122 WIEIVNMVVSGIIGDRPWLVLGDFNQVLNPQEHSNP---VSLNVDINMRDFRDCLLAAEL 178
Query: 179 LDLGFNGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIE 238
DL + G FTW N H + + ++DR+ +D + F + L FGS + +
Sbjct: 179 SDLRYKGNTFTWWNKSHTTP-VAKKIDRILVNDSWNALFP----SSLGIFGSLDFSDHVS 233
Query: 239 LDVCLEDAHKKKLHVFRFEKCWADDDRCEAMVRGSWN--NATG-----LASKIEAMQSLD 291
V LE+ K F+F + +VR +W N G ++ K++A++
Sbjct: 234 CGVVLEETSIKAKRPFKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPI 293
Query: 292 SKFKEYITSEIRKELLEIETQL---NNHASWDGSPDNITKFRELEAKHSELLQTEETMWR 348
F SE+ K E L + D +P N + E E K L EE+ +R
Sbjct: 294 KDFSRLNYSELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEESFFR 353
Query: 349 QRSRATWLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLF 408
Q+SR +W EGD N+K+FH A R NSI + D G + ++ + + YF L
Sbjct: 354 QKSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLL 413
Query: 409 TSS-NPTTVDQTC--LVVKDRLSPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPAL 465
+P ++Q L++ R SP V +FS +I+ A+ + K+ GPDG A
Sbjct: 414 GDEVDPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAE 473
Query: 466 FFQKYWYIVGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVM 525
FF W IVG+EV + G + N T I LIPK NP+ + FRPIS N +
Sbjct: 474 FFIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLY 533
Query: 526 KIVTKTIANRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMK 585
K++ + + +RL+ +L ++ QSAF+ GR + +N ++A + H +G++ K
Sbjct: 534 KVIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRGML--K 591
Query: 586 LDMAKAYDRIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILINGQPSRRFFPERGLR 645
+D+ KA+D + W FV + L+++ PE IN I QCIST ++ + ING F +GLR
Sbjct: 592 VDLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLR 651
Query: 646 QGDPLSPYLFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVE 705
QGDPLSPYLF+L S LL + IH A N I+HL+FADD ++F
Sbjct: 652 QGDPLSPYLFVLAMEAFSNLLHSRYESGLIHYHPKASNL-SISHLMFADDVMIFFDGGSF 710
Query: 706 EAQCIISVLNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLP 765
I L+ + SG VN DKS + + LN + RYLGLP
Sbjct: 711 SLHGICETLDDFASWSGLKVNKDKSHLYLAG--LNQLESNANAAYGFPIGTLPIRYLGLP 768
Query: 766 VIFGRSKKEVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGC 825
++ + + + + E++ + + W KCLS AG+ LI +V N+ MS + LP+GC
Sbjct: 769 LMNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGC 828
Query: 826 CDAVEGMLAKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLL 885
+E + ++F W+ + + K + W L K GGLG R ++NK L + WRL
Sbjct: 829 IKRIESLCSRFLWSGNIEQAKGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLF 888
Query: 886 ADNNSLMSSILKSRYFPRTSISITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRI 945
+SL + + R S + G + W+ L+ R L +GNG
Sbjct: 889 VAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADY 948
Query: 946 FKDNWIPGTRCTPIQRTEGTVDEDAVVADLI--VHETRSWDRERIMASFNS---FIAKKI 1000
+ DNW T P+ R G + ++ L+ V S D R+ S ++ I +
Sbjct: 949 WYDNW---TSLGPLFRIIGDIGPSSLRVPLLAKVASAFSEDGWRLPVSRSAPAKGIHDHL 1005
Query: 1001 LSIPISFRLPDDKVTWQWEKSGEYSVRSGHHLLCENKS-----KEVAESSSVR--GSDIW 1053
++P+ +D ++W +G LC+ S + + ++V+ S IW
Sbjct: 1006 CTVPVPSTAQEDVDRYEWSVNG---------FLCQGFSAAKTWEAIRPKATVKSWASSIW 1056
Query: 1054 KQIWNFNG--PRSAQNFLWRLASNILPTRCNLSKKGISLDQSCPLCNSGLEDLNHLFLHC 1111
F G P+ A N +W N L TR L+ G +C LC+ E +HL L C
Sbjct: 1057 -----FKGAVPKYAFN-MWVSHLNRLLTRQRLASWGHIQSDACVLCSFASESRDHLLLIC 1110
Query: 1112 PAAKAVWFSSPLGIHIPPNSMCREWMEL--WLKKDDP-----LAVQVFGITLWRLWQGRN 1164
+ VW I P + W EL W+++ P L V + ++ LW+ RN
Sbjct: 1111 EFSAQVWRLVFRRI-CPRQRLFSSWSELLSWVRQSSPEAPPLLRKIVSQVVVYNLWRQRN 1169
Query: 1165 QLIFKNSPFDPALI 1178
L+ + PA+I
Sbjct: 1170 NLLHNSLRLAPAVI 1183
>At4g15590 reverse transcriptase like protein
Length = 929
Score = 420 bits (1079), Expect = e-117
Identities = 287/923 (31%), Positives = 446/923 (48%), Gaps = 70/923 (7%)
Query: 181 LGFNGYPFTWSNGRHGSGRI*CRLDRVFASDEFIKRFSPIQINHLARFGSDHAAISIELD 240
+GF G FTW G S + RLDRV AR A + +
Sbjct: 1 MGFKGNRFTWRRGLVESTFVAKRLDRVLFCAH-------------ARLKWQEALLCPAQN 47
Query: 241 VCLEDAHKKKLHVFRFEKCWADDDRCEAMVRGSWNNATGLASKIEAMQSLDSKFKEYITS 300
V DA ++ FRFE W + + ++ SW+ TGL++ + A+ L + K++
Sbjct: 48 V---DARRRP---FRFEAAWLSHEGFKELLTASWD--TGLSTPV-ALNRLRWQLKKWNKE 98
Query: 301 -----EIRKELLEIETQ-LNNHASWDGSPDNITKFRELEAKHSELLQTEETMWRQRSRAT 354
+RKE + + + + + + D + K L + LL EET+W Q+SR
Sbjct: 99 VFGNIHVRKEKVVSDLKAVQDLLEVVQTDDLLMKEDTLLKEFDVLLHQEETLWFQKSREK 158
Query: 355 WLKEGDKNSKFFHAKAKQRGKINSIKKIKDDRGVWWNGRDKVEKVLVDYFAGLFTSSNPT 414
L GD+N+ FFH R + N I+ +KD W ++ +EK+ +DY+ L++ + +
Sbjct: 159 LLALGDRNTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRKLYSLEDVS 218
Query: 415 TVDQTCLVVK-DRLSPEHVEWCNRSFSPAEIKDAIDQMHPLKAPGPDGLPALFFQKYWYI 473
V T RL+ E NR F+ E+ A+ M KAPGPDG +F+Q+ W
Sbjct: 219 VVRGTLPTEGFPRLTREEKNNLNRPFTRDEVVVAVRSMGRFKAPGPDGYQPVFYQQCWET 278
Query: 474 VGSEVVSLALGILNEGKSTECINKTFIALIPKCKNPSSPNQFRPISLCNVVMKIVTKTIA 533
VG V + G + N + L+ K P QFRP+SLCNV+ KI+TK +
Sbjct: 279 VGESVSKFVMEFFESGVLPKSTNDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMMV 338
Query: 534 NRLKPILPEIMDEEQSAFVQGRLITDNAIIAMECFHWMKKKTKGKKGVMAMKLDMAKAYD 593
RLK ++ +++ Q++F+ GRL DN ++ E H M++K KG+KG M +KLD+ KAYD
Sbjct: 339 IRLKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRK-KGRKGWMLLKLDLEKAYD 397
Query: 594 RIEWSFVKSMLQSMNFPENIINTILQCISTVSYQILINGQPSRRFFPERGLRQGDPLSPY 653
RI W F+ L++ E I I++C++ +L NG+ + F PERGLRQGDP+SPY
Sbjct: 398 RIRWDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPY 457
Query: 654 LFILCANVLSGLLKKEEKDNKIHGIRIARNAPKITHLLFADDGLLFARASVEEAQCIISV 713
LF+LC L ++ I I++ PK++H+ FADD +LFA ASV
Sbjct: 458 LFVLCIERLCHQIETAVGRGDWKSISISQGGPKVSHVCFADDLILFAEASV--------- 508
Query: 714 LNTYQDASGQIVNLDKSEVSYSRNVLNHDKEIICQRINIKTVNTHSRYLGLPVIFGRSKK 773
Q V+L+KS++ +S NV + +I I + +YLG+PV+ R K
Sbjct: 509 --------AQKVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINK 560
Query: 774 EVFSFVQERVWKKIKGWKEKCLSRAGKETLIKAVAQAIPNYIMSCYKLPEGCCDAVEGML 833
+ F V ERV ++ GWK + LS AG+ TL KAV +IP + MS LP + ++ +
Sbjct: 561 DTFGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVS 620
Query: 834 AKFWWASDEYKRKIHWMRWGRLGETKKRGGLGFRSFSDFNKALLGKQYWRLLADNNSLMS 893
F W S KRK H + W ++ K GGLG R+ D N+ALL K WRLL D SL +
Sbjct: 621 RNFLWGSTVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWA 680
Query: 894 SILKSRYFPRTSISITKVGFQPRYAWRSLMKARELVENDAHWVIGNGRTVRIFKDNWIPG 953
+L+ +Y + + P+ W S ++ IG G + K +
Sbjct: 681 RVLRRKY--KVTDVHDSSWLVPKATWSSTWRS-----------IGVGLREGVAKGWILHE 727
Query: 954 TRCTPIQRTEGTVDEDAVVADLIVHETRSWDRERIMASFNSFIAKKILSIPISFRLP-DD 1012
CT + +A V + E WD ++ + ++ ++ I L D
Sbjct: 728 PLCTRATCLLSPEELNARVEEFWT-EGVGWDMVKLGQCLPRSVTDRLHAVVIKGVLGLRD 786
Query: 1013 KVTWQWEKSGEYSVRSGHHLLC-ENKSKEVAESSSVRGSDIWKQIWNFNGPRSAQNFLWR 1071
+++WQ G+++V S + LL E +SK ES +K+IW P + FLW
Sbjct: 787 RISWQGTSDGDFTVGSAYVLLTQEEESKPCMES-------FFKRIWGVIAPERVRVFLWL 839
Query: 1072 LASNILPTRCNLSKKGISLDQSC 1094
+ ++ T ++ I + C
Sbjct: 840 VGQQVIMTNVERVRRHIGDIEVC 862
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.322 0.137 0.432
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,578,443
Number of Sequences: 26719
Number of extensions: 1464809
Number of successful extensions: 3638
Number of sequences better than 10.0: 131
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 3075
Number of HSP's gapped (non-prelim): 231
length of query: 1363
length of database: 11,318,596
effective HSP length: 111
effective length of query: 1252
effective length of database: 8,352,787
effective search space: 10457689324
effective search space used: 10457689324
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)
Medicago: description of AC146790.3