BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146758.8 - phase: 0 /pseudo
         (35 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g36500 unknown protein (At2g36500)                                  56  3e-09
At3g52950 unknown protein                                              55  9e-09
At5g63490 putative protein                                             52  5e-08
At5g50640 putative protein                                             51  1e-07
At5g50530 putative protein                                             51  1e-07

>At2g36500 unknown protein (At2g36500)
          Length = 536

 Score = 56.2 bits (134), Expect = 3e-09
 Identities = 28/35 (80%), Positives = 32/35 (91%)

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISEG 35
           MAARRVDAVLLTD++ LL GI+TDKD ATRVI+EG
Sbjct: 86  MAARRVDAVLLTDSSALLSGIVTDKDIATRVIAEG 120


>At3g52950 unknown protein
          Length = 556

 Score = 54.7 bits (130), Expect = 9e-09
 Identities = 27/35 (77%), Positives = 31/35 (88%)

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISEG 35
           MAARRVDA LLTD++ LL GI+TDKD ATRVI+EG
Sbjct: 88  MAARRVDACLLTDSSALLSGIVTDKDVATRVIAEG 122


>At5g63490 putative protein
          Length = 543

 Score = 52.4 bits (124), Expect = 5e-08
 Identities = 25/34 (73%), Positives = 31/34 (90%)

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISE 34
           MA+RRVDA+LLTD+N +L GI+TDKD ATRVIS+
Sbjct: 79  MASRRVDALLLTDSNEMLCGILTDKDIATRVISQ 112


>At5g50640 putative protein
          Length = 548

 Score = 51.2 bits (121), Expect = 1e-07
 Identities = 24/34 (70%), Positives = 31/34 (90%)

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISE 34
           MAARRVDA+LLTD+N LL GI+TD+D AT+VI++
Sbjct: 87  MAARRVDALLLTDSNALLCGILTDRDIATKVIAK 120


>At5g50530 putative protein
          Length = 548

 Score = 51.2 bits (121), Expect = 1e-07
 Identities = 24/34 (70%), Positives = 31/34 (90%)

Query: 1   MAARRVDAVLLTDANGLLFGIMTDKDTATRVISE 34
           MAARRVDA+LLTD+N LL GI+TD+D AT+VI++
Sbjct: 87  MAARRVDALLLTDSNALLCGILTDRDIATKVIAK 120


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.322    0.136    0.360 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 554,112
Number of Sequences: 26719
Number of extensions: 8620
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 11
Number of HSP's gapped (non-prelim): 9
length of query: 35
length of database: 11,318,596
effective HSP length: 11
effective length of query: 24
effective length of database: 11,024,687
effective search space: 264592488
effective search space used: 264592488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)