BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146757.2 + phase: 0
(1715 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g61330 copia-type polyprotein 747 0.0
At1g48710 hypothetical protein 744 0.0
At3g60170 putative protein 709 0.0
At2g15650 putative retroelement pol polyprotein 704 0.0
At3g25450 hypothetical protein 656 0.0
At1g32590 hypothetical protein, 5' partial 645 0.0
At2g20460 putative retroelement pol polyprotein 601 e-171
At3g59720 copia-type reverse transcriptase-like protein 596 e-170
At2g05390 putative retroelement pol polyprotein 590 e-168
At2g16000 putative retroelement pol polyprotein 585 e-166
At1g31210 putative reverse transcriptase 580 e-165
At1g70010 hypothetical protein 567 e-161
At1g37110 548 e-156
At3g45520 copia-like polyprotein 548 e-155
At2g07550 putative retroelement pol polyprotein 546 e-155
At2g13930 putative retroelement pol polyprotein 533 e-151
At1g26990 polyprotein, putative 533 e-151
At2g21460 putative retroelement pol polyprotein 528 e-150
At5g35820 copia-like retrotransposable element 520 e-147
At4g27210 putative protein 504 e-142
>At3g61330 copia-type polyprotein
Length = 1352
Score = 747 bits (1928), Expect = 0.0
Identities = 411/1092 (37%), Positives = 616/1092 (55%), Gaps = 59/1092 (5%)
Query: 617 ESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLLSIHPKVCLRAREKQRSWYLDSGC 676
E K P K + KA EK + D L++ + K +++ WYLDSG
Sbjct: 293 ECKAPSNKKFEEKAHYVEEKIQEE--------DMLLMASYKK---DEQKENHKWYLDSGA 341
Query: 677 SRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLK 731
S HM G K++F L G V G ++ G G I I+NV+ + +K
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 732 HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF-SDLADQKVVCL 790
N+LS+ Q + GYD+ N ++ +++ IT ++ +N +D+A +C
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 791 LSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKS 850
++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C GK K SF
Sbjct: 462 ---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPK 517
Query: 851 KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSS 910
+ +PLEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K K E+F
Sbjct: 518 ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 911 FCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNRT 970
F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQQN VVERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRT 637
Query: 971 LQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQF 1030
+ EMAR+M+ L K WAEAV + Y+ NR + + KT E + GR+P +S+ F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 1031 GCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGS 1090
G + + K D K+++ IF+GY SK Y++YN +T+ S ++ FD+
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 1091 KTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNE 1150
S + + N ED E P+ E +E ++P P + ++S+ E SS +
Sbjct: 758 WNSNEEDYNFFPHFEEDEPE---PTREEPPSEEPTTP-----PTSPTSSQIEESSSERT- 808
Query: 1151 IASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIGLLSIIEPKT 1210
P+F+ +EL ++ T L L + EP
Sbjct: 809 ---------------PRFRSI----QELYEVTENQENLT---------LFCLFAECEPMD 840
Query: 1211 VEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEVTRNKA 1270
++A+ W AM EE+ Q+ND W+L P IG KWV++ K N +GEV R KA
Sbjct: 841 FQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKA 900
Query: 1271 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEV 1330
RLVA+GYSQ+ GIDY E FAPVARLE +RL++S A + ++QMDVKSAFLNG +EEEV
Sbjct: 901 RLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960
Query: 1331 YVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKT 1390
Y++QP G+ D V +LKK LYGLKQAPRAW R+ + + DF + + L+ K
Sbjct: 961 YIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020
Query: 1391 LKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVY 1450
K+DILI +YVDD+IF +N S+ +EF K M EFEM+ +G + +++GI++ Q G++
Sbjct: 1021 QKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 1080
Query: 1451 VHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASR 1510
+ Q Y KE+LKKFK++D + TPM LSK++ G VD ++ ++GSL YLT +R
Sbjct: 1081 ITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTR 1140
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAG 1570
PDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYKL+G+ D+D+ G
Sbjct: 1141 PDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGG 1200
Query: 1571 DRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQ 1630
D +RKSTSG ++G+ +W SK+Q + +ST EAEY++A SC +W+++ L++
Sbjct: 1201 DVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELS 1260
Query: 1631 I-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWA 1689
+ I+ DN +AI L+KNP+ H R+KHI+ ++H+IR+ V K + ++++ T Q A
Sbjct: 1261 LPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVA 1320
Query: 1690 DIFTKPLSVERF 1701
D FTKPL E F
Sbjct: 1321 DFFTKPLKRENF 1332
Score = 84.3 bits (207), Expect = 5e-16
Identities = 67/299 (22%), Positives = 133/299 (44%), Gaps = 16/299 (5%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +MK+ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSIA---LPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMA 280
+ +E E KK + IA L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIAEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKS 339
+ + K + K K C+NC K GH+ ++C +KF+ K+
Sbjct: 249 PHEDNTNQRGENSSRGRGKGHPKSRYDKSSVK-CYNCGKFGHYASECKAPSNKKFEEKA 306
>At1g48710 hypothetical protein
Length = 1352
Score = 744 bits (1921), Expect = 0.0
Identities = 413/1096 (37%), Positives = 618/1096 (55%), Gaps = 61/1096 (5%)
Query: 617 ESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLLSIHPKVCLRAREKQRSWYLDSGC 676
E K P K + KA EK + D L++ + K +E+ WYLDSG
Sbjct: 293 ECKAPSNKKFEEKANYVEEKIQEE--------DMLLMASYKK---DEQEENHKWYLDSGA 341
Query: 677 SRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLK 731
S HM G K++F L G V G ++ G G I I+NV+ + +K
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 732 HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF-SDLADQKVVCL 790
N+LS+ Q + GYD+ N ++ +++ IT ++ +N +D+A +C
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDQESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 791 LSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKS 850
++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C GK K SF
Sbjct: 462 ---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGKQFKMSFPK 517
Query: 851 KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSS 910
+ + LEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K K E+F
Sbjct: 518 ESSSRAQKSLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 911 FCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNRT 970
F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQQN V ERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDRGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 971 LQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQF 1030
+ EMAR+M+ L K WAEAV + Y+ NR + + KT E + GR+ +S+ F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVF 697
Query: 1031 GCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGS 1090
G + + K D K+++ IF+GY SK Y++YN +T+ S ++ FD+
Sbjct: 698 GSIAHAHVPDEKRSKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 1091 KTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNE 1150
S + + N ED E P+ E +E ++P P + ++S+ E SS +
Sbjct: 758 WNSNEEDYNFFPHFEEDEPE---PTREEPPSEEPTTP-----PTSPTSSQIEESSSERT- 808
Query: 1151 IASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIGLLSIIEPKT 1210
P+F+ +EL ++ T L L + EP
Sbjct: 809 ---------------PRFRSI----QELYEVTENQENLT---------LFCLFAECEPMD 840
Query: 1211 VEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEVTRNKA 1270
+EA+ W AM EE+ Q+ND W+L P IG KWV++ K N +GEV R KA
Sbjct: 841 FQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVERYKA 900
Query: 1271 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEV 1330
RLVA+GY Q+ GIDY E FAPVARLE +RL++S A + ++QMDVKSAFLNG +EEEV
Sbjct: 901 RLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960
Query: 1331 YVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKT 1390
Y++QP G+ D V +LKK+LYGLKQAPRAW R+ + + DF + + L+ K
Sbjct: 961 YIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020
Query: 1391 LKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVY 1450
K+DILI +YVDD+IF +N S+ +EF K M EFEM+ +G + +++GI++ Q G++
Sbjct: 1021 QKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 1080
Query: 1451 VHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASR 1510
+ Q Y KE+LKKFK++D + TPM LSK++ G VD ++ ++GSL YLT +R
Sbjct: 1081 ITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTR 1140
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAG 1570
PDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYKL+G+ D+D+ G
Sbjct: 1141 PDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGG 1200
Query: 1571 DRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQ 1630
D +RKSTSG ++G+ +W SK+Q + +ST EAEY++A SC +W+++ L++
Sbjct: 1201 DVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELS 1260
Query: 1631 I-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWA 1689
+ I+ DN +AI L+KNP+ H R+KHI+ ++H+IR+ V K + ++++ T Q A
Sbjct: 1261 LPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEYVKTHDQVA 1320
Query: 1690 DIFTKPLSVERFDFIK 1705
DIFTKPL +R DFIK
Sbjct: 1321 DIFTKPL--KREDFIK 1334
Score = 83.6 bits (205), Expect = 9e-16
Identities = 71/327 (21%), Positives = 147/327 (44%), Gaps = 20/327 (6%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +MK+ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSI---ALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMA 280
+ +E E KK + I L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIIEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
+ + K + K K C+NC K GH+ ++C +KF+ +
Sbjct: 249 PHEDNTNQRGENSSRGRGKGHPKSRYDKSSVK-CYNCGKFGHYASECKAPSNKKFE---E 304
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSE 367
K+++ K +++ LMA+++ + E
Sbjct: 305 KANYVEEKIQEE-DMLLMASYKKDEQE 330
>At3g60170 putative protein
Length = 1339
Score = 709 bits (1830), Expect = 0.0
Identities = 402/1089 (36%), Positives = 614/1089 (55%), Gaps = 48/1089 (4%)
Query: 647 LNDQKLLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTG 706
L +++ L + V + W+LDSGCS HMTG K F L VK G +
Sbjct: 277 LEEEEELLLMAYVEQNQANRDEVWFLDSGCSNHMTGSKEWFSELEEGFNRTVKLGNDTRM 336
Query: 707 KIIGTGTI-----GNSSISINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDD 761
++G G++ G + + I V+ V L++NLLS+ Q + G + C + +
Sbjct: 337 SVVGKGSVKVKVNGVTQV-IPEVYYVPELRNNLLSLGQLQERGLAILIRDGTCKVYHPSK 395
Query: 762 KSITFKGKRVENVYKINFSDLADQKVVCLLS---MNDKKWVWHKRLGHANWRLISKISKL 818
+I ++ + + + +CL + M+ + +WH R GH N + ++
Sbjct: 396 GAIMETNMSGNRMFFL-LASKPQKNSLCLQTEEVMDKENHLWHCRFGHLNQEGLKLLAHK 454
Query: 819 QLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYG 878
++V GLP + + +C C GK + S K +S L+L+H D+ GP+ S G
Sbjct: 455 KMVIGLPILKATKE-ICAICLTGKQHRESMSKKTSWKSSTQLQLVHSDICGPITPISHSG 513
Query: 879 SKYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEP 938
+Y L +DD++R TWV F+ K A F F ++ E + +R+D GGEF +
Sbjct: 514 KRYILSFIDDFTRKTWVYFLHEKSEAFATFKIFKASVEKEIGAFLTCLRTDRGGEFTSNE 573
Query: 939 FELFCEKHGILHEFSSPRTPQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCY 998
F FC HGI + ++ TPQQN V ERKNRT+ R+M+ E + K FW+EA S +
Sbjct: 574 FGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSEATKWSVH 633
Query: 999 IQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGY 1058
IQNR + T E + GR+P + YF FGC Y+ K D K+++ +FLG
Sbjct: 634 IQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSKKCVFLGV 693
Query: 1059 SERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSE 1118
SE SKA+R+Y+ + + S V FD+ + E+ T + D D E
Sbjct: 694 SEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGD-------EDDE 746
Query: 1119 KYTEVESSPEAEITPE---AESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFK--HKSS 1173
K +EV P A +P +++N + P + S T++ P + +++
Sbjct: 747 KNSEVVE-PIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYETG 805
Query: 1174 HPEELIIGSKESPRRTRSHFRQEESLIGLLSII----EPKTVEEALSDDGWILAMQEELN 1229
EE+ EE+L +L ++ +P ++A+ D W AM+ E+
Sbjct: 806 EGEEI-----------------EENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIE 848
Query: 1230 QFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETF 1289
+N+ W+L P IG KWV++ KLNE GEV + KARLVA+GY+Q GIDYTE F
Sbjct: 849 SIVKNNTWELTTLPKGFTPIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVF 908
Query: 1290 APVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYK 1349
APVARL+ +R +L+ + ++Q+DVKSAFL+G ++EEVYV+QP GF + VYK
Sbjct: 909 APVARLDTVRTILAISSQFNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYK 968
Query: 1350 LKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGS 1409
L+K+LYGLKQAPRAWY R+ + +K +FER + TLF KT +ILIV +YVDD+IF
Sbjct: 969 LRKALYGLKQAPRAWYSRIEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDLIFTG 1028
Query: 1410 SNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLEDC 1469
S+ ++C EF K M EFEMS +G++K F+GI++ QS G+++ Q +Y +E+L +F +++
Sbjct: 1029 SDKAMCDEFKKSMMLEFEMSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDES 1088
Query: 1470 KMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRE 1529
+ P+ P L+K++ G VD+ +++ ++GSL+YLT +RPD+++ VCL +RF S+PR
Sbjct: 1089 NAVKNPIVPGTKLTKDENGEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRM 1148
Query: 1530 SHLTAVKRIFRYLKGTTNLGLLY--RKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGE 1587
SH A KRI RYLKGT LG+ Y RK+ KL+ F D+DYAGD +R+STSG +
Sbjct: 1149 SHWLAAKRILRYLKGTVELGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMAS 1208
Query: 1588 NLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIP-IYCDNTAAI 1646
I WASK+Q +A+ST EAEYI+AA C Q +W++ LE S I CDN++ I
Sbjct: 1209 GAICWASKKQPVVALSTTEAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTI 1268
Query: 1647 CLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKK 1706
LSK+P+LH ++KHIE++ H++RD V ++ +++ TE Q ADIFTKPL +E+F+ ++
Sbjct: 1269 QLSKHPVLHGKSKHIEVRFHYLRDLVNGDVVKLEYCPTEDQVADIFTKPLKLEQFEKLRA 1328
Query: 1707 NLNMHFVSD 1715
L M +S+
Sbjct: 1329 LLGMVNMSE 1337
Score = 108 bits (271), Expect = 2e-23
Identities = 78/301 (25%), Positives = 137/301 (44%), Gaps = 43/301 (14%)
Query: 32 PKFNGDPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKL 91
P+F+G + +W M +F+ ELW ++E+G+ + + + +R A ++
Sbjct: 13 PRFDG---YYDFWSMTMENFLRS--RELWRLVEEGIPAIVVGTTPVSEAQR---SAVEEA 64
Query: 92 YKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYEL 151
K K++ + +I R + DKST+KA++ S+ ++GS KVK A+ L ++EL
Sbjct: 65 KLKDLKVKNFLFQAIDREILETILDKSTSKAIWESMKKKYQGSTKVKRAQLQALRKEFEL 124
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDL 211
MK+ E I+ R T+V+ ++ + S VSKILRSL ++ V +IEE+ DL
Sbjct: 125 LAMKEGEKIDTFLGRTLTVVNKMKTNGEVMEQSTIVSKILRSLTPKFNYVVCSIEESNDL 184
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDS 271
+TLS+++L SL VHE LN H +++ + + + ++ S
Sbjct: 185 STLSIDELHGSLLVHEQRLNGHVQEEQALKVTHEERPSQGRGRGVFRGSRGR-------- 236
Query: 272 DEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQ 331
RG ++ C+ C GHF +CP+ +
Sbjct: 237 ---------------------------GRGRGRSGTNRAIVECYKCHNLGHFQYECPEWE 269
Query: 332 K 332
K
Sbjct: 270 K 270
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 704 bits (1816), Expect = 0.0
Identities = 389/1052 (36%), Positives = 596/1052 (55%), Gaps = 46/1052 (4%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIGNSSIS-------IN 722
W +DSGC+ HMT E+ F + ++ + G I+ T G+ ++ I
Sbjct: 326 WLVDSGCTNHMTKEERYFSNINKSIKVPIRV---RNGDIVMTAGKGDITVMTRHGKRIIK 382
Query: 723 NVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDL 782
NV+LV GL+ NLLS+ Q +GY V F C + + + K I + + +KI S +
Sbjct: 383 NVFLVPGLEKNLLSVPQIISSGYWVRFQDKRCIIQDANGKEI-MNIEMTDKSFKIKLSSV 441
Query: 783 ADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGK 842
++ + + + WHKRLGH + + + ++ +LV GLP + C AC GK
Sbjct: 442 EEEAMTANVQTEE---TWHKRLGHVSNKRLQQMQDKELVNGLPRFKVTKET-CKACNLGK 497
Query: 843 IVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ SF + T LE++H D+ GP+ S+ GS+Y ++ +DDY+ WV F+K K
Sbjct: 498 QSRKSFPKESQTKTREKLEIVHTDVCGPMQHQSIDGSRYYVLFLDDYTHMCWVYFLKQKS 557
Query: 903 YACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNR 962
F F ++ + +I +R P E+FCE GI + + P +PQQN
Sbjct: 558 ETFATFKKFKALVEKQSNCSIKTLR----------PMEVFCEDEGINRQVTLPYSPQQNG 607
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEK-TAYELFKGRR 1021
ERKNR+L EMAR+M+ E +L WAEAV TS Y+QNR+ + + + T E + G +
Sbjct: 608 AAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQNRLPSKAIEDDVTPMEKWCGHK 667
Query: 1022 PNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHV 1081
PN+S+ FG CY+ +K DAKA+ GI +GYS ++K YRV+ E + VE S V
Sbjct: 668 PNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSNQTKGYRVFLLEDEKVEVSRDV 727
Query: 1082 KFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEA 1141
F + + ++ D ES ++ SS + + +N E
Sbjct: 728 VFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQET-------SSHDLSQIDDHANNGEG 780
Query: 1142 EPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIG 1201
E SS V +++ ++ ++ ++ PK K+KS +E++ +++PR Q
Sbjct: 781 ETSSHVLSQVNDQEERETSES---PK-KYKSM--KEIL---EKAPRMENDEAAQGIEAC- 830
Query: 1202 LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNE 1261
L++ EP+T +EA D W AM EE+ ++N W LV KP +KN+I KW+++ K +
Sbjct: 831 LVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKIKTDA 890
Query: 1262 QGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAF 1321
G ++KARLVA+G+SQ+ GIDY ETFAPV+R + IR LL+YA LYQMDVKSAF
Sbjct: 891 SGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDVKSAF 950
Query: 1322 LNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQ 1381
LNG +EEEVYV QPPGF + V +L K+LYGLKQAPRAWY+R+ ++ I+N F R
Sbjct: 951 LNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGFARSM 1010
Query: 1382 VDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQ 1441
D L+ K +D+LIV +YVDD+I +N L F K M+DEFEM+ +G L +F+G++
Sbjct: 1011 NDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYFLGME 1070
Query: 1442 INQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLS--KEDTGTVVDQKLYRGM 1499
+NQ G+++ Q KY +L+ KF +++ K ++TP+ P + D D YR +
Sbjct: 1071 VNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTKYRRI 1130
Query: 1500 IGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYK 1559
+G LLYL ASRPD++++ +R+ S P H KR+ RY+KGT+N G+L+ +
Sbjct: 1131 VGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSKETPR 1190
Query: 1560 LIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQL 1619
L+G+ D+D+ G ++KST+G LG + W S +Q T+A STAEAEYI+ + Q
Sbjct: 1191 LVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAATNQA 1250
Query: 1620 LWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILD 1678
+W++ ED+ + IPI CDN +AI + +NP+ H R KHIEIK+HF+R+ KG++
Sbjct: 1251 IWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHKGLIQ 1310
Query: 1679 IQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+++ E Q AD+ TK LSV RF+ +++ L +
Sbjct: 1311 LEYCKGEDQLADVLTKALSVSRFEGLRRKLGV 1342
Score = 82.0 bits (201), Expect = 3e-15
Identities = 64/298 (21%), Positives = 133/298 (44%), Gaps = 16/298 (5%)
Query: 37 DPEEFSWWKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHH 96
D E++ +W M + +LW ++E+GV + E R T ++ +
Sbjct: 13 DGEKYDFWSIKMATIFR--TRKLWSVVEEGVPVEPVQAEETPETARAKTLREEAVTNDTM 70
Query: 97 KIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKD 156
++ I+ ++ + +++ S++K + L ++GS +V+ K L +YE +M D
Sbjct: 71 ALQ-ILQTAVTDQIFSRIAAASSSKEAWDVLKDEYQGSPQVRLVKLQSLRREYENLKMYD 129
Query: 157 DESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSV 216
+++I+ + L L + ++ + KIL SLP+++ V+ +E+ +DL+ L++
Sbjct: 130 NDNIKTFTDKLIVLEIQLTYHGEKKTNTQLIQKILISLPAKFDSIVSVLEQTRDLDALTM 189
Query: 217 EDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQS 276
+L+ LK E + E S K + + SKG+ ES + + ++ +Q
Sbjct: 190 SELLGILKAQEARVTAREESTKEGAFYVRSKGR-----------ESGFKQDNTNNRVNQD 238
Query: 277 VKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEK 334
K ++ + ++ KN K C+ C K GH+ +C KE+
Sbjct: 239 KKWCGFHKSSKHTEEECREKPKNDDHGKN--KRSNIKCYKCGKIGHYANECRSKNKER 294
>At3g25450 hypothetical protein
Length = 1343
Score = 656 bits (1693), Expect = 0.0
Identities = 377/1113 (33%), Positives = 628/1113 (55%), Gaps = 42/1113 (3%)
Query: 613 LIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLLSIHPKVCLRAREKQRSWYL 672
LI+ + + K++D ++A + + LN++ + + C+ +WYL
Sbjct: 246 LIRLQEQKEKEEDDTHEAESLMMHEVV------YLNEKNIRPTELESCIN-----NAWYL 294
Query: 673 DSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLV 727
D+G S HMTG +A F L G+V+FG + I G G+I G + +V+ +
Sbjct: 295 DNGASNHMTGNRAWFCKLDEMITGKVRFGDDSCINIKGKGSIPFISKGGERKILFDVYYI 354
Query: 728 DGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVEN-VYKINFSDLADQK 786
LK N+LS+ Q ++G D+ + TL +++ ++ K +R N +YK++ ++ + K
Sbjct: 355 PDLKSNILSLGQATESGCDIRMREDYLTLHDREG-NLLIKAQRSRNRLYKVSL-EVENSK 412
Query: 787 VVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKS 846
+ L + N+ +WH RLGH ++ I + K +LV G+ + CG+C GK +
Sbjct: 413 CLQLTTTNEST-IWHARLGHISFETIKAMIKKELVIGISSSVPQEKETCGSCLFGKQARH 471
Query: 847 SFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACE 906
SF ++ LEL+H DL GP++ ++ +Y V++DD+SR+ W +K K A
Sbjct: 472 SFPKATSYRAAQVLELIHGDLCGPISPSTAAKKRYVFVLIDDHSRYMWSILLKEKSEAFG 531
Query: 907 VFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVER 966
F F ++ E I R+D GGEF + F+ FC K GI ++P TPQQN VVER
Sbjct: 532 KFKEFKALVEQECGAIIKTFRTDRGGEFLSHEFQEFCAKEGINRHLTAPYTPQQNGVVER 591
Query: 967 KNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISY 1026
+NRTL M R+++ N+ + W EAV S Y+ NR+ R + +T YE+FK ++PN+ +
Sbjct: 592 RNRTLLGMTRSILKHMNMPNYLWGEAVRHSTYLINRVGTRSLSNQTPYEVFKHKKPNVEH 651
Query: 1027 FHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDR 1086
FGC Y LKK D +++ ++LG SKAYR+ + + + S V FD+
Sbjct: 652 LRVFGCVSYAKVEVPNLKKLDDRSRMLVYLGTEPGSKAYRLLDPTKRRIFVSRDVVFDEN 711
Query: 1087 EPG--SKTSEQSESNAGT-TDSEDASESDQPSDSEKYTEVESSPEAEITPEAESN-SEAE 1142
++S +++ +GT T + ++ ++++ TE E + EAEI E E+ EAE
Sbjct: 712 RSWMWQESSSETDKESGTFTITLSEFGNNGVTENDISTEPEETEEAEINGEDENIIEEAE 771
Query: 1143 PSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIGL 1202
Q++ + + + +QVI+P + ++ ++ ++ E L+ +
Sbjct: 772 TEEHDQSQEEPQPVRRSQRQVIRPNYL------KDYVLCAE---------IEAEHLLLAV 816
Query: 1203 LSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQ 1262
EP +EA W A +EE+ ++N W LV P IG KWVF+ K N
Sbjct: 817 ND--EPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDLPVGSKAIGVKWVFKLKHNSD 874
Query: 1263 GEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFL 1322
G + + KARLVA+GY Q+ G+D+ E FAPVAR+E +RL+++ A ++G ++ +DVK+AFL
Sbjct: 875 GSINKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLIIALAASNGWEIHHLDVKTAFL 934
Query: 1323 NGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQV 1382
+G + E+VYV QP GF + + + VYKL K+LYGL+QAPRAW +L+ L + FE+
Sbjct: 935 HGELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPRAWNTKLNEILKELKFEKCHK 994
Query: 1383 DTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQI 1442
+ +L+RK ++IL+V +YVDD++ SN + F K M +FEMS +G+L +++GI++
Sbjct: 995 EPSLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGMVGKFEMSDLGKLTYYLGIEV 1054
Query: 1443 NQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGS 1502
QSK+G+ + Q +Y K++L++ + C +NTPM + LSK +D+ YR IG
Sbjct: 1055 LQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLELSKAQDEKRIDETDYRRNIGC 1114
Query: 1503 LLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIG 1562
L YL +RPD+ ++V + +R+ +PRESH A+K+I RYL+GTT+ GL ++K + LIG
Sbjct: 1115 LRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYLQGTTSHGLYFKKGENAGLIG 1174
Query: 1563 FCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWM 1622
+ D+ + D + KST G+ +L + I+W S++Q + +S+ EAE+++A Q +W+
Sbjct: 1175 YSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTLSSCEAEFMAATEAAKQAIWL 1234
Query: 1623 KHQL-EDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQF 1681
+ L E + I DN +AI L+KNP+ H R+KHI ++HFIR+ V+ G ++++
Sbjct: 1235 QELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHIHRRYHFIRECVENGQIEVEH 1294
Query: 1682 IDTEHQWADIFTKPLSVERFDFIKKNLNMHFVS 1714
+ Q ADI TK L +F +++ + + VS
Sbjct: 1295 VPGVRQKADILTKALGKIKFLEMRELIGVQGVS 1327
Score = 70.5 bits (171), Expect = 8e-12
Identities = 47/186 (25%), Positives = 95/186 (50%), Gaps = 16/186 (8%)
Query: 93 KKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELF 152
+K+ R ++ SIP + +++ + T+ A++ ++ + G+++VKEA+ L+ +++
Sbjct: 58 EKNDMARALLFQSIPESLILQVGKQKTSSAVWEAIKSRNLGAERVKEARLQTLMAEFDKL 117
Query: 153 RMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLP-SRWRPKVTAIEEAKDL 211
+MKD E+I++ R + + L + S V K L+SLP ++ V A+E+ DL
Sbjct: 118 KMKDSETIDDYVGRISEITTKAAALGEDIEESKIVKKFLKSLPRKKYIHIVAALEQVLDL 177
Query: 212 NTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDS 271
T + ED+ +K +E + + + S + +GK +E EEE D
Sbjct: 178 KTTTFEDIAGRIKTYEDRVWDDDDSHE-------DQGKL--------MTEVEEEVVDDLE 222
Query: 272 DEDQSV 277
+E++ V
Sbjct: 223 EEEEEV 228
>At1g32590 hypothetical protein, 5' partial
Length = 1263
Score = 645 bits (1665), Expect = 0.0
Identities = 359/1060 (33%), Positives = 578/1060 (53%), Gaps = 68/1060 (6%)
Query: 665 EKQRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSI 719
E+++ W+LDSGCS HM G + FL L V+ G ++ + G G + G +
Sbjct: 253 EEKQIWFLDSGCSNHMCGTREWFLELDSGFKQNVRLGDDRRMAVEGKGKLRLEVDGRIQV 312
Query: 720 SINNVWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF 779
I++V+ V GLK+NL S+ Q G C + +K +K + +N + F
Sbjct: 313 -ISDVYFVPGLKNNLFSVGQLQQKGLRFIIEGDVCEVWHKTEKRMVMHSTMTKNRMFVVF 371
Query: 780 SDLADQKVV----CLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDY-HSDAL 834
+ + K CL + +WHKR GH N + + +++ ++VKGLP D +A+
Sbjct: 372 AAVKKSKETEETRCLQVIGKANNMWHKRFGHLNHQGLRSLAEKEMVKGLPKFDLGEEEAV 431
Query: 835 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTW 894
C C KGK ++ S + +++ L+L+H D+ GP+N AS G +Y L +DD+SR W
Sbjct: 432 CDICLKGKQIRESIPKESAWKSTQVLQLVHTDICGPINPASTSGKRYILNFIDDFSRKCW 491
Query: 895 VKFIKSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSS 954
+ K + F F +++ E ++ +RSD GGE+ + F+ +C++ GI + ++
Sbjct: 492 TYLLSEKSETFQFFKEFKAEVERESGKKLVCLRSDRGGEYNSREFDEYCKEFGIKRQLTA 551
Query: 955 PRTPQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAY 1014
TPQQN V ERKNR++ M R M+ E ++ + FW EAV + YI NR + + + T
Sbjct: 552 AYTPQQNGVAERKNRSVMNMTRCMLMEMSVPRKFWPEAVQYAVYILNRSPSKALNDITPE 611
Query: 1015 ELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQC 1074
E + +P++ + FG Y L K D K+ + + G S+ SKAYR+Y+ T
Sbjct: 612 EKWSSWKPSVEHLRIFGSLAYALVPYQKRIKLDEKSIKCVMFGVSKESKAYRLYDPATGK 671
Query: 1075 VEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPE 1134
+ S V+FD+ E G + ++S D+ D P E PE
Sbjct: 672 ILISRDVQFDE-ERGWEWEDKSLEEELVWDNSD-----------------HEPAGEEGPE 713
Query: 1135 AESNSEAEPS-SKVQNEIASEDFQDNTQQVIQPKFKHKSSHP--EELIIGSKESPRRTRS 1191
N + + ++ + E +E N V + + ++ ++G+ R +
Sbjct: 714 INHNGQQDQEETEEEEETVAETVHQNLPAVGTGGVRQRQQPVWMKDYVVGNA---RVLIT 770
Query: 1192 HFRQEESLIGLLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGT 1251
++E L + +P EEA + W AM+ E+ + N+ W+LV P + +IG
Sbjct: 771 QDEEDEVLALFIGPDDPVCFEEAAQLEVWRKAMEAEITSIEENNTWELVELPEEAKVIGL 830
Query: 1252 KWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGII 1311
KW+F+ K NE+GEV + KARLVA+GY Q+ G+D+ E FAPVA+ + IRL+L A G
Sbjct: 831 KWIFKTKFNEKGEVDKFKARLVAKGYHQRYGVDFYEVFAPVAKWDTIRLILGLAAEKGWS 890
Query: 1312 LYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNF 1371
++Q+DVKSAFL+G ++E+V+V+QP GFE + VYKLKK+LYGLKQAPRAWY R+ F
Sbjct: 891 VFQLDVKSAFLHGDLKEDVFVEQPKGFEVEEESSKVYKLKKALYGLKQAPRAWYSRIEEF 950
Query: 1372 LIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMM 1431
K FE+ + TLF K + D L+V +YVDD+I+ S+ + + F M +EF M+ +
Sbjct: 951 FGKEGFEKCYCEHTLFVKKERSDFLVVSVYVDDLIYTGSSMEMIEGFKNSMMEEFAMTDL 1010
Query: 1432 GELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVV 1491
G++K+F+G+++ Q + G++++Q KY E++KK+ +E C + P+ P L+K G V
Sbjct: 1011 GKMKYFLGVEVIQDERGIFINQRKYAAEIIKKYGMEGCNSVKNPIVPGQKLTK--AGAV- 1067
Query: 1492 DQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLL 1551
+R+ P E HL AVKRI RY++GT +LG+
Sbjct: 1068 -----------------------------SRYMESPNEQHLLAVKRILRYVQGTLDLGIQ 1098
Query: 1552 YRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYIS 1611
Y + +L+GF D+DYAGD +RKSTSG LG I+WASK+Q + +ST EAE++S
Sbjct: 1099 YERGGATELVGFVDSDYAGDVDDRKSTSGYVFMLGGGAIAWASKKQPIVTLSTTEAEFVS 1158
Query: 1612 AASCCTQLLWMKHQLEDYQI-NANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRD 1670
A+ Q +W+++ LE+ ++CDN++ I LSKNP+LH R+KHI +++HF+R+
Sbjct: 1159 ASYGACQAVWLRNVLEEIGCRQEGGTLVFCDNSSTIKLSKNPVLHGRSKHIHVRYHFLRE 1218
Query: 1671 YVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
V++G + + + T Q ADI TK + E F+ ++ + +
Sbjct: 1219 LVKEGTIRLDYCTTTDQVADIMTKAVKREVFEELRGRMGV 1258
Score = 95.5 bits (236), Expect = 2e-19
Identities = 66/244 (27%), Positives = 111/244 (45%), Gaps = 40/244 (16%)
Query: 94 KHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFR 153
K HK++ + ASI +T + K T+K ++ S+ ++G+ +V+ A+ L +E+
Sbjct: 24 KDHKVKNYLFASIDKTILKTILQKETSKDLWESMKRKYQGNDRVQSAQLQRLRRSFEVLE 83
Query: 154 MKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNT 213
MK E+I +SR + + ++ L + S V KILR+L ++ V AIEE+ ++
Sbjct: 84 MKIGETITGYFSRVMEITNDMRNLGEDMPDSKVVEKILRTLVEKFTYVVCAIEESNNIKE 143
Query: 214 LSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDE 273
L+V+ L SSL VHE +L+ H+ + + K+ ++ PDG
Sbjct: 144 LTVDGLQSSLMVHEQNLSRHDVEE-----------RVLKAETQWR--------PDGGRGR 184
Query: 274 DQSVKMAMLSNKLEYLARKQKKFLSKRGSY----KNFKKEDQKGCFNCKKPGHFIADCPD 329
S RG Y + + D CF C K GH+ A+CP
Sbjct: 185 GGSPSRG-----------------RGRGGYQGRGRGYVNRDTVECFKCHKMGHYKAECPS 227
Query: 330 LQKE 333
+KE
Sbjct: 228 WEKE 231
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 601 bits (1549), Expect = e-171
Identities = 374/1173 (31%), Positives = 616/1173 (51%), Gaps = 57/1173 (4%)
Query: 547 KDGLKSTFVPEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTKSVPKSQKITILKRS 606
K G F P+G ++ KP+A +Q ++ +++ + + Q ++
Sbjct: 329 KHGFPPGFTPKGKSSDKP--PKPQAVAAQVTLSPDKMTGQLETLAGNFSPDQIQNLI--- 383
Query: 607 ETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLLSIHPKVCLRAREK 666
+ + ++P+ P+ +++A++ S+ P G+ + + I
Sbjct: 384 -ALFSSQLQPQIVSPQTASSQHEASS-SQSVAPSGI---LFSPSTYCFIGILAVSHNSLS 438
Query: 667 QRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTG---KIIGTGTIG-NSSISIN 722
+W +DSG + H++ ++ LF TL D V F TG +I G GT+ N I +
Sbjct: 439 SDTWVIDSGATHHVSHDRKLFQTL---DTSIVSFVNLPTGPNVRISGVGTVLINKDIILQ 495
Query: 723 NVWLVDGLKHNLLSISQFC-DNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSD 781
NV + + NL+SIS D G V F + C + + +GKR+ N+Y ++
Sbjct: 496 NVLFIPEFRLNLISISSLTTDLGTRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLDTQS 555
Query: 782 LADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKG 841
A + + ++ D VWHKRLGH ++ S++ L V G A C C
Sbjct: 556 PA----ISVNAVVDVS-VWHKRLGHPSF---SRLDSLSEVLGTTRHKNKKSAYCHVCHLA 607
Query: 842 KIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSK 901
K K SF S + + S ELLHID++GP + ++ G KY L IVDD+SR TW+ +KSK
Sbjct: 608 KQKKLSFPSANNICNST-FELLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWIYLLKSK 666
Query: 902 DYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQN 961
VF +F ++++ + + VRSD+ E F F + GI+ S P TP+QN
Sbjct: 667 SDVLTVFPAFIDLVENQYDTRVKSVRSDNAKELA---FTEFYKAKGIVSFHSCPETPEQN 723
Query: 962 RVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRR 1021
VVERK++ + +AR ++ ++N++ +W + V T+ ++ NR + KT +E+ G+
Sbjct: 724 SVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAVFLINRTPSALLSNKTPFEVLTGKL 783
Query: 1022 PNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHV 1081
P+ S FGC CY + KF +++ +FLGY K Y++ + E+ V S +V
Sbjct: 784 PDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLGYPFGFKGYKLLDLESNVVHISRNV 843
Query: 1082 KFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEA 1141
+F + +S+QS TT S+ + D S T SP+
Sbjct: 844 EFHEELFPLASSQQS----ATTASDVFTPMDPLSSGNSITSHLPSPQIS----------- 888
Query: 1142 EPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIG 1201
PS+++ ++ F + Q SHP I S + + SH +
Sbjct: 889 -PSTQISKRRITK-FPAHLQDYHCYFVNKDDSHP---ISSSLSYSQISPSHMLY---INN 940
Query: 1202 LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNE 1261
+ I P++ EA W A+ +E+ +R D W++ P K +G KWVF K +
Sbjct: 941 ISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFTVKFHA 1000
Query: 1262 QGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAF 1321
G + R KAR+VA+GY+Q+EG+DYTETF+PVA++ ++LLL + + L Q+D+ +AF
Sbjct: 1001 DGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLDISNAF 1060
Query: 1322 LNGVIEEEVYVKQPPGFEDLKH----PDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDF 1377
LNG +EE +Y+K P G+ D+K P+ V +LKKS+YGLKQA R W+ + SN L+ F
Sbjct: 1061 LNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSLLALGF 1120
Query: 1378 ERGQVDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFF 1437
E+ D TLF + + + +++ +YVDDI+ S+ + ++ ++ F++ +G LK+F
Sbjct: 1121 EKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELGPLKYF 1180
Query: 1438 MGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYR 1497
+G+++ ++ EG+ + Q KY ELL + DCK + PM P LSK D + D+++YR
Sbjct: 1181 LGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLEDKEMYR 1240
Query: 1498 GMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLD 1557
++G L+YLT +RPDI F+V +F S PR +HL AV ++ +Y+KGT GL Y D
Sbjct: 1241 RLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFYSAEDD 1300
Query: 1558 YKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCT 1617
L G+ DAD+ R+ST+G F+G +LISW SK+Q T++ S+AEAEY + A
Sbjct: 1301 LTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRALALASC 1360
Query: 1618 QLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGIL 1677
++ W+ L ++++ +Y D+TAA+ ++ NP+ H R KHIEI H +R+ + G L
Sbjct: 1361 EMAWLSTLLLALRVHSGVPILYSDSTAAVYIATNPVFHERTKHIEIDCHTVREKLDNGQL 1420
Query: 1678 DIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+ + T+ Q ADI TKPL +F + +++
Sbjct: 1421 KLLHVKTKDQVADILTKPLFPYQFAHLLSKMSI 1453
>At3g59720 copia-type reverse transcriptase-like protein
Length = 1272
Score = 596 bits (1536), Expect = e-170
Identities = 347/951 (36%), Positives = 508/951 (52%), Gaps = 84/951 (8%)
Query: 617 ESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLLSIHPKVCLRAREKQRSWYLDSGC 676
E K P K K KA EK + D L++ + K +E+ WYLDSG
Sbjct: 293 ECKAPSNKKFKEKANYVEEKIQEE--------DMLLMASYKK---DEQEENHKWYLDSGA 341
Query: 677 SRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLK 731
S HM G K++F L G V G ++ G G I I+NV+ + +K
Sbjct: 342 SNHMCGRKSMFAELDESVRGNVALGDESKMEVKGKGNILIRLKNGDHQFISNVYYIPSMK 401
Query: 732 HNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINF-SDLADQKVVCL 790
N+LS+ Q + GYD+ N ++ +K+ IT ++ +N +D+A +C
Sbjct: 402 TNILSLGQLLEKGYDIRLKDNNLSIRDKESNLITKVPMSKNRMFVLNIRNDIAQCLKMCY 461
Query: 791 LSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKS 850
++ W+WH R GH N+ + +S+ ++V+GLP I+ H + +C C G K SF
Sbjct: 462 ---KEESWLWHLRFGHLNFGGLELLSRKEMVRGLPCIN-HPNQVCEGCLLGNQFKMSFPK 517
Query: 851 KDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYACEVFSS 910
+ +PLEL+H D+ GP+ SL S Y L+ +DD+SR TWV F+K K E+F
Sbjct: 518 ESSSRAQKPLELIHTDVCGPIKPKSLGKSNYFLLFIDDFSRKTWVYFLKEKSEVFEIFKK 577
Query: 911 FCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNRT 970
F ++ E L I +RSD GGEF ++ F +CE +GI + + PR+PQQN V ERKNRT
Sbjct: 578 FKAHVEKESGLVIKTMRSDSGGEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRT 637
Query: 971 LQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQF 1030
+ EMAR+M+ L K WAEAV + Y+ NR + + KT E + GR+P +S+ F
Sbjct: 638 ILEMARSMLKSKRLPKELWAEAVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVF 697
Query: 1031 GCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGS 1090
G + + K D K+++ IF+GY SK Y++YN +T+ S ++ FD+
Sbjct: 698 GSIAHAHVPDEKRNKLDDKSEKYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWD 757
Query: 1091 KTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAEPSSKVQNE 1150
S + + N ED E P+ E +E ++P P + ++S+ E SS +
Sbjct: 758 WNSNEEDYNFFPHFEEDKPE---PTREEPPSEEPTTP-----PTSPTSSQIEESSSERT- 808
Query: 1151 IASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIGLLSIIEPKT 1210
P+F+ +EL ++ T L L + EP
Sbjct: 809 ---------------PRFRSI----QELYEVTENQENLT---------LFCLFAECEPMD 840
Query: 1211 VEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEVTRNKA 1270
+EA+ W AM EE+ Q+ND W+L P IG KWV++ K N +GEV R KA
Sbjct: 841 FQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNSKGEVERYKA 900
Query: 1271 RLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEV 1330
RLVA+GYSQ+ GIDY E FAPVARLE +RL++S A + ++QMDVKSAFLNG +EEEV
Sbjct: 901 RLVAKGYSQRAGIDYDEIFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLEEEV 960
Query: 1331 YVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKT 1390
Y++QP G+ D V +LKK LYGLKQAPRAW R+ + + DF + + L+ K
Sbjct: 961 YIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKCPYEHALYIKI 1020
Query: 1391 LKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVY 1450
K+DILI +YVDD+IF +N S+ +EF K M EFEM+ +G + +++GI++ Q G++
Sbjct: 1021 QKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEVKQEDNGIF 1080
Query: 1451 VHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASR 1510
+ Q Y KE+LKKFK++D ++GSL YLT +R
Sbjct: 1081 ITQEGYAKEVLKKFKMDDSN--------------------------PSLVGSLRYLTCTR 1114
Query: 1511 PDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLI 1561
PDIL++V + +R+ P +H A KRI RY+KGT N GL Y + DYKL+
Sbjct: 1115 PDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV 1165
Score = 85.1 bits (209), Expect = 3e-16
Identities = 72/327 (22%), Positives = 147/327 (44%), Gaps = 20/327 (6%)
Query: 44 WKTNMYSFIMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIV 103
W M + + D +W+I+E G ++ + EG+ + + K+ K +I
Sbjct: 21 WSLRMKAILGAHD--VWEIVEKGF--IEPENEGSL--SQTQKDGLRDSRKRDKKALCLIY 74
Query: 104 ASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEM 163
+ + K+ + ++AK + L +++G+ +VK+ + L ++E +MK+ E + +
Sbjct: 75 QGLDEDTFEKVVEATSAKEAWEKLRTSYKGADQVKKVRLQTLRGEFEALQMKEGELVSDY 134
Query: 164 YSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDLNTLSVEDLVSSL 223
+SR T+ + L+ + + K+LRSL ++ VT IEE KDL +++E L+ SL
Sbjct: 135 FSRVLTVTNNLKRNGEKLDDVRIMEKVLRSLDLKFEHIVTVIEETKDLEAMTIEQLLGSL 194
Query: 224 KVHEMSLNEHETSKKSKSI---ALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMA 280
+ +E E KK + I L + ++ ++Y+ + G
Sbjct: 195 QAYE------EKKKKKEDIVEQVLNMQITKEENGQSYQRRGGGQVRGRGRGGYGNGRGWR 248
Query: 281 MLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIADCPDLQKEKFKGKSK 340
+ + K + K K C+NC K GH+ ++C +KFK +
Sbjct: 249 PHEDNTNQRGENSSRGRGKGHPKSRYDKSSVK-CYNCGKFGHYASECKAPSNKKFK---E 304
Query: 341 KSSFNSSKFRKQIKKSLMATWEDLDSE 367
K+++ K +++ LMA+++ + E
Sbjct: 305 KANYVEEKIQEE-DMLLMASYKKDEQE 330
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 590 bits (1520), Expect = e-168
Identities = 345/1041 (33%), Positives = 567/1041 (54%), Gaps = 52/1041 (4%)
Query: 669 SWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINN 723
SWYLD+G S HMTG F L G+V+FG + I G G+I G ++ +
Sbjct: 279 SWYLDNGASNHMTGNLQWFSKLNEMITGKVRFGDDSRIDIKGKGSIVLITKGGIRKTLTD 338
Query: 724 VWLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLA 783
V+ + LK N++S+ Q + G DV TL +++ + + +YK+ DL
Sbjct: 339 VYFIPDLKSNIISLGQATEAGCDVRMKDDQLTLHDREGCLLLRATRSRNRLYKV---DLN 395
Query: 784 DQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKI 843
+ V CL +L A + + +LV G+ NI + CG+C GK
Sbjct: 396 VENVKCL------------QLEAAT------MVRKELVIGISNIPKEKET-CGSCLLGKQ 436
Query: 844 VKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDY 903
+ F S+ LEL+H DL GP+ ++ +Y LV++DD++R+ W +K K
Sbjct: 437 ARQPFPKATTYRASQVLELVHGDLCGPITQSTTAKKRYILVLIDDHTRYMWSMLLKEKSE 496
Query: 904 ACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRV 963
A E F F +++ E + I R+D GGEF ++ F+ FC K GI ++P TPQQN V
Sbjct: 497 AFEKFRDFKTKVEQESGVKIKTFRTDKGGEFVSQEFQDFCAKEGINRHLTAPYTPQQNGV 556
Query: 964 VERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPN 1023
VER+NRTL M R+++ + + W EAV S YI NR+ R + +T YE+FK R+PN
Sbjct: 557 VERRNRTLLGMTRSILKHMKMPNYLWGEAVRHSTYIINRVGTRSLQNQTPYEVFKQRKPN 616
Query: 1024 ISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKF 1083
+ + FGC Y +L+K D +++ ++LG SKAYR+ + + + + +
Sbjct: 617 VEHLRVFGCIGYAKIEGPHLRKLDDRSKMLVYLGTEPGSKAYRLLDPTNRKIIKWNNSDS 676
Query: 1084 DDRE-PGSKTSEQSE-SNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEA 1141
+ R+ G+ + E N G +S+D +SE E E E + ++ E
Sbjct: 677 ETRDISGTFSLTLGEFGNNGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAE-ET 735
Query: 1142 EPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLIG 1201
+PS + + +T+QV +P + ++ ++ + E+ L+
Sbjct: 736 QPS----HATPLPTLRRSTRQVGKPNYL------DDYVL---------MAEIEGEQVLLA 776
Query: 1202 LLSIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNE 1261
+ EP +EA W A +EE+ ++N W L+ P ++ +IG KWVF+ K N
Sbjct: 777 IND--EPWDFKEANKLKEWRDACKEEILSIEKNKTWSLIDLPVRRKVIGLKWVFKIKRNS 834
Query: 1262 QGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAF 1321
G + + KARLVA+GY Q+ GIDY E FA VAR+E IR++++ A ++G ++ +DVK+AF
Sbjct: 835 DGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVIIALAASNGWEVHHLDVKTAF 894
Query: 1322 LNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQ 1381
L+G + E+VYV QP GF + + VYKL K+LYGLKQAPRAW +L+ L + +F +
Sbjct: 895 LHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAPRAWNTKLNKILQELNFVKCS 954
Query: 1382 VDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQ 1441
+ +++R+ +K +LIV IYVDD++ S+ L F K M +FEMS +G+L +++GI+
Sbjct: 955 KEPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKDMAGKFEMSDLGQLTYYLGIE 1014
Query: 1442 INQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIG 1501
+ K G+ + Q +Y +++++ + +C + PM L K + ++ YR MIG
Sbjct: 1015 VLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLELCKAQEEKCITERDYRRMIG 1074
Query: 1502 SLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLI 1561
L Y+ +RPD+ + V + +R+ PRESH A+K++ RYLKGT + GL ++ L+
Sbjct: 1075 CLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRYLKGTMSHGLYLKRGFKSGLV 1134
Query: 1562 GFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLW 1621
G+ D+ ++ D + KST+G+ +L + I+W S++Q +A+S+ EAE+++A Q +W
Sbjct: 1135 GYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVALSSCEAEFMAATEAAKQAIW 1194
Query: 1622 MKHQL-EDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQ 1680
++ E + + I DN +AI L+KN + H R+KHI ++HFIR+ V+ ++++
Sbjct: 1195 LQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKHIHRRYHFIRECVENNLVEVD 1254
Query: 1681 FIDTEHQWADIFTKPLSVERF 1701
+ Q ADI TKPL +F
Sbjct: 1255 HVPGVEQRADILTKPLGRIKF 1275
Score = 87.4 bits (215), Expect = 6e-17
Identities = 61/288 (21%), Positives = 127/288 (43%), Gaps = 54/288 (18%)
Query: 58 ELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKKLYKKHHKIRGIIVASIPRTEYMKMSDK 117
++W+ ++ G DD++ K+ R ++ S+P + +++
Sbjct: 9 KVWETIDPGSDDME----------------------KNDMARALLFQSVPESTILQVGKH 46
Query: 118 STAKAMFASLCANFEGSKKVKEAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQIL 177
T+KAM+ ++ G+++VKEAK L+ +++ MKD+E+I+E R + + + L
Sbjct: 47 KTSKAMWEAIKTRNLGAERVKEAKLQTLMAEFDRLNMKDNETIDEFVGRISEISTKSESL 106
Query: 178 KKSYVSSDHVSKILRSLP-SRWRPKVTAIEEAKDLNTLSVEDLVSSLKVHEMSLNEHETS 236
+ S V K L+SLP ++ + A+E+ DLNT ED+V +K +E + + + S
Sbjct: 107 GEEIEESKIVKKFLKSLPRKKYIHIIAALEQILDLNTTGFEDIVGRMKTYEDRVCDEDDS 166
Query: 237 KKSKSIALPSKGKTSKSSKAYKASESEEESPDGDSDEDQSVKMAMLSNKLEYLARKQKKF 296
+ + + + ++S ++ + S G
Sbjct: 167 PEEQGKLMYANSESSYDTRGGRGRGRGRSSGRG--------------------------- 199
Query: 297 LSKRGSYKNFKKEDQKG-CFNCKKPGHFIADCPDLQKEKFKGKSKKSS 343
RG Y +++ K C+ C K GH+ ++C D + K + ++ +
Sbjct: 200 ---RGGYGYQQRDKSKVICYRCDKTGHYASECLDRLLKLIKAQEQQQN 244
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 585 bits (1507), Expect = e-166
Identities = 372/1171 (31%), Positives = 605/1171 (50%), Gaps = 56/1171 (4%)
Query: 547 KDGLKSTFVPEGTNAKTAVQSKPEASGSQAKITSKPENLKIKVMTKSVPKSQKITILKRS 606
K G F P+G + + KP A+ S N ++ M ++ K Q +
Sbjct: 325 KHGFPPGFTPKGKAGEKLQKPKPLAANVAE---SSEVNTSLESMVGNLSKEQLQQFIAMF 381
Query: 607 ETVHQNLIKPESKIPKQKDQKNKAATASEKTIPKGVKPKVLNDQKLLSIHPKVCLRAREK 666
+ QN P S A+T+ + P + +L++ R
Sbjct: 382 SSQLQNT--PPSTYAT-------ASTSQSDNLGICFSPSTYSFIGILTV-----ARHTLS 427
Query: 667 QRSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG-NSSISINNVW 725
+W +DSG + H++ +++LF +L V T KI G GT+ N I + NV
Sbjct: 428 SATWVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNVL 487
Query: 726 LVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NL+SIS D+ G V F K +C + + + +G+RV N+Y + D+ D
Sbjct: 488 FIPEFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLL---DVGD 544
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIV 844
Q + ++ +WH+RLGHA+ + + IS G C C K
Sbjct: 545 QSISVNAVVDIS--MWHRRLGHASLQRLDAISDSL---GTTRHKNKGSDFCHVCHLAKQR 599
Query: 845 KSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKDYA 904
K SF + + V +LLHID++GP + ++ G KY L IVDD+SR TW+ +K+K
Sbjct: 600 KLSFPTSNKVC-KEIFDLLHIDVWGPFSVETVEGYKYFLTIVDDHSRATWMYLLKTKSEV 658
Query: 905 CEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVV 964
VF +F Q++++ ++ + VRSD+ E + F F + GI+ S P TP+QN VV
Sbjct: 659 LTVFPAFIQQVENQYKVKVKAVRSDNAPELK---FTSFYAEKGIVSFHSCPETPEQNSVV 715
Query: 965 ERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNI 1024
ERK++ + +AR ++ ++ + W + V T+ ++ NR + ++ KT YE+ G P
Sbjct: 716 ERKHQHILNVARALMFQSQVPLSLWGDCVLTAVFLINRTPSQLLMNKTPYEILTGTAPVY 775
Query: 1025 SYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFD 1084
FGC CY + KF +++ +FLGY K Y++ + E+ V S +V+F
Sbjct: 776 EQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGYPSGYKGYKLMDLESNTVFISRNVQFH 835
Query: 1085 DREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAEPS 1144
+ + SES+ S SD+ S +++ P+ S +P
Sbjct: 836 EEVFPLAKNPGSESSLKLFTPMVPVSSGIISDTTHSPSSLPSQISDLPPQISSQRVRKPP 895
Query: 1145 SKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIG-SKESPRRTRSHFRQEESLIGLL 1203
+ + D+ NT Q HK +P I SK SP SH + +
Sbjct: 896 AHLN------DYHCNTMQS-----DHK--YPISSTISYSKISP----SHMCY---INNIT 935
Query: 1204 SIIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQG 1263
I P EA W A+ E+ ++ + W++ P K +G KWVF K G
Sbjct: 936 KIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCKWVFTLKFLADG 995
Query: 1264 EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLN 1323
+ R KARLVA+GY+Q+EG+DYT+TF+PVA++ I+LLL + + L Q+DV +AFLN
Sbjct: 996 NLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFLKQLDVSNAFLN 1055
Query: 1324 GVIEEEVYVKQPPGFEDLKH----PDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFER 1379
G +EEE+++K P G+ + K + V +LK+S+YGLKQA R W+ + S+ L+ F++
Sbjct: 1056 GELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKFSSSLLSLGFKK 1115
Query: 1380 GQVDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMG 1439
D TLF K + +IV +YVDDI+ S++ + + ++ + F++ +G+LK+F+G
Sbjct: 1116 THGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFKLRDLGDLKYFLG 1175
Query: 1440 IQINQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGM 1499
+++ ++ G+ + Q KY ELL+ + CK ++ PM P + K+D + D + YR +
Sbjct: 1176 LEVARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDGDLIEDIEQYRRI 1235
Query: 1500 IGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYK 1559
+G L+YLT +RPDI F+V +F S PR +HLTA R+ +Y+KGT GL Y S D
Sbjct: 1236 VGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVGQGLFYSASSDLT 1295
Query: 1560 LIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQL 1619
L GF D+D+A + R+ST+ F+G++LISW SK+Q T++ S+AEAEY + A ++
Sbjct: 1296 LKGFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEAEYRALALATCEM 1355
Query: 1620 LWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDI 1679
+W+ L Q + +Y D+TAAI ++ NP+ H R KHI++ H +R+ + G L +
Sbjct: 1356 VWLFTLLVSLQASPPVPILYSDSTAAIYIATNPVFHERTKHIKLDCHTVRERLDNGELKL 1415
Query: 1680 QFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+ TE Q ADI TKPL +F+ +K +++
Sbjct: 1416 LHVRTEDQVADILTKPLFPYQFEHLKSKMSI 1446
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 580 bits (1496), Expect = e-165
Identities = 355/1064 (33%), Positives = 565/1064 (52%), Gaps = 43/1064 (4%)
Query: 668 RSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKII---GTGTI--GNSSISIN 722
+ W+ DS + H+T + T +G + G+ T I G+ TI N I +N
Sbjct: 320 KEWHPDSAATAHVTSSTNGLQSATEYEGDDAVLVGDGTYLPITHTGSTTIKSSNGKIPLN 379
Query: 723 NVWLVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSD 781
V +V ++ +LLS+S+ CD+ V F +++ + + G R +Y
Sbjct: 380 EVLVVPNIQKSLLSVSKLCDDYPCGVYFDANKVCIIDLQTQKVVTTGPRRNGLYV----- 434
Query: 782 LADQKVVCLLSMND---KKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGAC 838
L +Q+ V L S + VWH RLGHAN + + LQ K + + +C C
Sbjct: 435 LENQEFVALYSNRQCAATEEVWHHRLGHANSKALQH---LQNSKAIQINKSRTSPVCEPC 491
Query: 839 QKGKIVKSSFKSKDIVSTSR---PLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWV 895
Q GK + F ++S SR PL+ +H DL+GP S G KY + VDDYSR++W
Sbjct: 492 QMGKSSRLPF----LISDSRVLHPLDRIHCDLWGPSPVVSNQGLKYYAIFVDDYSRYSWF 547
Query: 896 KFIKSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSP 955
+ +K VF SF ++++ I +SD GGEF + + +HGI H S P
Sbjct: 548 YPLHNKSEFLSVFISFQKLVENQLNTKIKVFQSDGGGEFVSNKLKTHLSEHGIHHRISCP 607
Query: 956 RTPQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYE 1015
TPQQN + ERK+R L E+ +M+ ++ + FW E+ T+ YI NR+ + + YE
Sbjct: 608 YTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVESFFTANYIINRLPSSVLKNLSPYE 667
Query: 1016 LFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCV 1075
G +P+ S FG CY KFD ++ + +FLGY+ + K YR + T V
Sbjct: 668 ALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSLQCVFLGYNSQYKGYRCFYPPTGKV 727
Query: 1076 EESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEA 1135
S +V F++ E K QS +T A + ++ S+ V ++P +
Sbjct: 728 YISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQHNKISE----ISVPAAPVQLFSKPI 783
Query: 1136 ESNSEAEPSSKVQNEIASEDFQDNTQ---QVIQPKFKHKSSHPEELIIGSKESPRRTRSH 1192
+ N+ A S+V ++ + N + + + P + +++ E+ +I S R+++
Sbjct: 784 DLNTYA--GSQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAANQEQ-VINSHAMTTRSKAG 840
Query: 1193 FRQEESLIGLLS----IIEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNI 1248
++ + L++ EPKT+ A+ GW A+ EE+N+ W LVP NI
Sbjct: 841 IQKPNTRYALITSRMNTAEPKTLASAMKHPGWNEAVHEEINRVHMLHTWSLVPPTDDMNI 900
Query: 1249 IGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINH 1308
+ +KWVF+ KL+ G + + KARLVA+G+ Q+EG+DY ETF+PV R IRL+L + +
Sbjct: 901 LSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETFSPVVRTATIRLVLDVSTSK 960
Query: 1309 GIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRL 1368
G + Q+DV +AFL+G ++E V++ QP GF D + P HV +L K++YGLKQAPRAW+D
Sbjct: 961 GWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCRLTKAIYGLKQAPRAWFDTF 1020
Query: 1369 SNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEM 1428
SNFL+ F + D +LF IL + +YVDDI+ S+ SL ++ + +++ F M
Sbjct: 1021 SNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTGSDQSLLEDLLQALKNRFSM 1080
Query: 1429 SMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTG 1488
+G ++F+GIQI G+++HQT Y ++L++ + DC M TP+ L ++
Sbjct: 1081 KDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDCNPMPTPLPQ--QLDNLNSE 1138
Query: 1489 TVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNL 1548
+ +R + G L YLT +RPDI F+V + P S +KRI RY+KGT +
Sbjct: 1139 LFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTTSDFGLLKRILRYIKGTIGM 1198
Query: 1549 GLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAE 1608
GL +++ L + D+D+AG + R+ST+G C LG NLISW++KRQ T++ S+ EAE
Sbjct: 1199 GLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNLISWSAKRQPTVSNSSTEAE 1258
Query: 1609 YISAASCCTQLLWMKHQLEDYQINANSIP--IYCDNTAAICLSKNPILHSRAKHIEIKHH 1666
Y + ++ W+ L D I +P +YCDN +A+ LS NP LH+R+KH + +H
Sbjct: 1259 YRALTYAAREITWISFLLRDLGI-PQYLPTQVYCDNLSAVYLSANPALHNRSKHFDTDYH 1317
Query: 1667 FIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
+IR+ V G+++ Q I Q AD+FTK L F ++ L +
Sbjct: 1318 YIREQVALGLIETQHISATFQLADVFTKSLPRRAFVDLRSKLGV 1361
>At1g70010 hypothetical protein
Length = 1315
Score = 567 bits (1462), Expect = e-161
Identities = 350/1013 (34%), Positives = 543/1013 (53%), Gaps = 45/1013 (4%)
Query: 708 IIGTGTIGNSSISINNVWLVDGLKHNLLSISQFCDN-GYDVTFSKTNCTLVNKDDKSITF 766
I G+ +G I +N+V + K NLLS+S + G + F +T+C L + + +
Sbjct: 313 ISGSVHLGRHLI-LNDVLFIPQFKFNLLSVSSLTKSMGCRIWFDETSCVLQDATRELMVG 371
Query: 767 KGKRVENVYKINFSDLA----DQKV-VCLLSMNDKKWVWHKRLGHANWRLISKISKL-QL 820
GK+V N+Y ++ L+ D + V ++ +D +WHKRLGH + + + +S L
Sbjct: 372 MGKQVANLYIVDLDSLSHPGTDSSITVASVTSHD---LWHKRLGHPSVQKLQPMSSLLSF 428
Query: 821 VKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSK 880
K N D+H C C K F S + S SRP +L+HID +GP + + G +
Sbjct: 429 PKQKNNTDFH----CRVCHISKQKHLPFVSHNNKS-SRPFDLIHIDTWGPFSVQTHDGYR 483
Query: 881 YGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFE 940
Y L IVDDYSR TWV +++K V +F ++++ E I VRSD+ E F
Sbjct: 484 YFLTIVDDYSRATWVYLLRNKSDVLTVIPTFVTMVENQFETTIKGVRSDNAPELN---FT 540
Query: 941 LFCEKHGILHEFSSPRTPQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQ 1000
F GI+ S P TPQQN VVERK++ + +AR++ ++++ +W + + T+ Y+
Sbjct: 541 QFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAVYLI 600
Query: 1001 NRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSE 1060
NR+ + +K +E+ P + FGC CY + KF +A+ F+GY
Sbjct: 601 NRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIGYPS 660
Query: 1061 RSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKY 1120
K Y++ + ET + S HV F + S+ S+ + + Q S+
Sbjct: 661 GFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSSDHV 720
Query: 1121 TEVESSPEAEITPEAE-SNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHK--SSHPEE 1177
+SS EI P A +N+ EPS + + A + +Q + H SS P E
Sbjct: 721 NPSDSSSSVEILPSANPTNNVPEPSVQTSHRKAKKP------AYLQDYYCHSVVSSTPHE 774
Query: 1178 LIIGSKESPRRTRSHFRQEESLIGLLSII----EPKTVEEALSDDGWILAMQEELNQFQR 1233
+ R+ S+ R + + L+ + EP EA W AM E + +
Sbjct: 775 I--------RKFLSYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAEFDFLEG 826
Query: 1234 NDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVA 1293
W++ P K IG +W+F+ K N G V R KARLVAQGY+Q+EGIDY ETF+PVA
Sbjct: 827 THTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVA 886
Query: 1294 RLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFE----DLKHPDHVYK 1349
+L +++LLL A + L Q+D+ +AFLNG ++EE+Y++ P G+ D P+ V +
Sbjct: 887 KLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCR 946
Query: 1350 LKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGS 1409
LKKSLYGLKQA R WY + S+ L+ F + D T F K L V +Y+DDII S
Sbjct: 947 LKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIAS 1006
Query: 1410 SNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLEDC 1469
+N + M+ F++ +GELK+F+G++I +S +G+++ Q KY +LL + C
Sbjct: 1007 NNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGC 1066
Query: 1470 KMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRE 1529
K + PM P+ + + G V+ YR +IG L+YL +RPDI F+V A+F PR+
Sbjct: 1067 KPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRK 1126
Query: 1530 SHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENL 1589
+HL AV +I +Y+KGT GL Y + + +L + +ADY R R+STSG C FLG++L
Sbjct: 1127 AHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSL 1186
Query: 1590 ISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICL 1648
I W S++Q ++ S+AEAEY S + +L+W+ + L++ Q+ + ++CDN AAI +
Sbjct: 1187 ICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHI 1246
Query: 1649 SKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
+ N + H R KHIE H +R+ + KG+ ++ I+TE Q AD FTKPL F
Sbjct: 1247 ANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHF 1299
>At1g37110
Length = 1356
Score = 548 bits (1413), Expect = e-156
Identities = 350/1077 (32%), Positives = 562/1077 (51%), Gaps = 86/1077 (7%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNV 724
W LDSGC+ HMT + F++ K + G + + + G GTI G + + NV
Sbjct: 308 WILDSGCTSHMTSRRDWFISFQEKGNTTILLGDDHSVESQGQGTIRIDTHGGTIKILENV 367
Query: 725 WLVDGLKHNLLSISQFCDNGY-------DVTFSKTNCTLVNKDDKSITFKGKRVENVYKI 777
V L+ NL+S GY V + K N T + +G +Y +
Sbjct: 368 KYVPHLRRNLISTGTLDKLGYRHEGGEGKVRYFKNNKTAL---------RGSLSNGLYVL 418
Query: 778 NFSDLADQKVVCLLSMNDKKW-VWHKRLGHANWRLISKISKLQLV--KGLPNIDYHSDAL 834
+ S + + +C + K +WH RLGH + + ++ L+ K + +++
Sbjct: 419 DGSTVMSE--LCNAETDKVKTALWHSRLGHMSMNNLKVLAGKGLIDRKEINELEF----- 471
Query: 835 CGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVN-TASLYGSKYGLVIVDDYSRWT 893
C C GK K SF S L +H DL+G N T S+ G +Y L I+DD +R
Sbjct: 472 CEHCVMGKSKKVSFNVGKHTSEDA-LSYVHADLWGSPNVTPSISGKQYFLSIIDDKTRKV 530
Query: 894 WVKFIKSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFS 953
W+ F+KSKD + F + ++++ + +R+D+G EF N F+ +C++HGI +
Sbjct: 531 WLYFLKSKDETFDKFCEWKSLVENQVNKKVKCLRTDNGLEFCNSRFDSYCKEHGIERHRT 590
Query: 954 SPRTPQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTA 1013
TPQQN V ER NRT+ E R +++++ + + FWAEA T+ Y+ NR +
Sbjct: 591 CTYTPQQNGVAERMNRTIMEKVRCLLNKSGVEEVFWAEAAATAAYLINRSPASAINHNVP 650
Query: 1014 YELFKGRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYN-SET 1072
E++ R+P + +FG Y+ + LK +A +G FLGY +K Y+V+ E
Sbjct: 651 EEMWLNRKPGYKHLRKFGSIAYVHQDQGKLKP---RALKGFFLGYPAGTKGYKVWLLEEE 707
Query: 1073 QCV-------EES-----MHVKFDDREPGSK---TSEQSESNAGTTDSEDASESDQPSDS 1117
+CV +ES + VK DD + ++ TS + E N S SDS
Sbjct: 708 KCVISRNVVFQESVVYRDLKVKEDDTDNLNQKETTSSEVEQNKFAEASGSGGVIQLQSDS 767
Query: 1118 EKYTEVESSPEAEITPEAESNSEAEPSSKVQNEIASEDFQDNTQQVIQP--KFKHKSSHP 1175
E TE E S ++E E E + + + + K + +D ++ I P +F +SS
Sbjct: 768 EPITEGEQSSDSE--EEVEYSEKTQETPKRTGLTTYKLARDRVRRNINPPTRFTEESSVT 825
Query: 1176 EELIIGSKESPRRTRSHFRQEESLIGLLSIIEPKTVEEALSD---DGWILAMQEELNQFQ 1232
L++ E+ I + EP++ +EA+ + W +A +E++
Sbjct: 826 FALVV---------------VENCI----VQEPQSYQEAMESQDCEKWDMATHDEMDSLM 866
Query: 1233 RNDVWDLVPKPFQKNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAP 1291
+N WDLV KP + IIG +W+F+ K G E TR KARLVA+GY+Q+EG+DY E FAP
Sbjct: 867 KNGTWDLVDKPKDRKIIGCRWLFKLKSGIPGVEPTRFKARLVAKGYTQREGVDYQEIFAP 926
Query: 1292 VARLEAIRLLLSYAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLK 1351
V + +IR+L+S ++ + L QMDVK+ FL+G +EEE+Y++QP GF + V +LK
Sbjct: 927 VVKHVSIRILMSLVVDKDLELEQMDVKTTFLHGDLEEELYMEQPEGFVSDSSENKVCRLK 986
Query: 1352 KSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTTLFRKTLKK-DILIVQIYVDDIIFGSS 1410
KSLYGLKQ+PR W R F+ F R + D ++ K + + D + + +YVDD++ +
Sbjct: 987 KSLYGLKQSPRQWNKRFDRFMSSQQFIRSEHDACVYVKHVSEHDFIYLLLYVDDMLIAGA 1046
Query: 1411 NASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQSKEG--VYVHQTKYTKELLKKFKLED 1468
+ + + + EFEM MG +GI I + ++G + + Q Y +++L +F +
Sbjct: 1047 SKAEINRVKEQLSTEFEMKDMGGASRILGIDIYRDRKGGVLKLSQEIYIRKVLDRFNMSG 1106
Query: 1469 CKMMNTPMHPTCTLS---KEDTGTVVDQKLYRGMIGSLLY-LTASRPDILFSVCLCARFQ 1524
KM N P+ L+ +ED D Y +GS++Y + +RPD+ +++CL +R+
Sbjct: 1107 AKMTNAPVGAHFKLAAVREEDECVDTDVVPYSSAVGSIMYAMLGTRPDLAYAICLISRYM 1166
Query: 1525 SDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQF 1584
S P H AVK + RYLKG +L L++ K D+ + G+CD++YA D R+S SG
Sbjct: 1167 SKPGSMHWEAVKWVMRYLKGAQDLNLVFTKEKDFTVTGYCDSNYAADLDRRRSISGYVFT 1226
Query: 1585 LGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTA 1644
+G N +SW + Q +AMST EAEYI+ A + +W+K L+D + + + I+CD+ +
Sbjct: 1227 IGGNTVSWKASLQPVVAMSTTEAEYIALAEAAKEAMWIKGLLQDMGMQQDKVKIWCDSQS 1286
Query: 1645 AICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
AICLSKN + H R KHI+++ ++IRD V+ G +D+ I T D TK + V +F
Sbjct: 1287 AICLSKNSVYHERTKHIDVRFNYIRDVVESGDVDVLKIHTSRNPVDALTKCIPVNKF 1343
>At3g45520 copia-like polyprotein
Length = 1363
Score = 548 bits (1412), Expect = e-155
Identities = 337/1070 (31%), Positives = 556/1070 (51%), Gaps = 60/1070 (5%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNV 724
W +D+GC HMT ++ + GG V+ G ++ G GT+ ++++ NV
Sbjct: 316 WIMDTGCIYHMTHKREWLEDFDEEAGGSVRMGNKSISRVKGVGTVRIVNDNGLTVTLQNV 375
Query: 725 WLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NLLS+ F G+ F N L K + +G+R + +Y ++ D
Sbjct: 376 RYIPDMDRNLLSLGTFEKAGHK--FESENGMLRIKSGNQVLLEGRRYDTLYILHGKPATD 433
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLV--KGLPNIDYHSDALCGACQKGK 842
+ + + ND +WH+RL H + + +S + K + K + +D D + G +K
Sbjct: 434 ESLA-VARANDDTVLWHRRLCHMSQKNMSLLIKKGFLDKKKVSMLDTCEDCIYGRAKK-- 490
Query: 843 IVKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVKFIKSK 901
+ + D T + LE +H DL+G P SL +Y + +DDY+R WV F+K+K
Sbjct: 491 -IGFNLAQHD---TKKKLEYVHSDLWGAPTVPMSLGNCQYFISFIDDYTRKVWVYFLKTK 546
Query: 902 DYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQN 961
D A E F S+ ++++ + +R+D+G EF N F+ FCE+ G + TPQQN
Sbjct: 547 DEAFEKFVSWISLVENQSGERVKTLRTDNGLEFCNRMFDGFCEEKGFQRHRTCAYTPQQN 606
Query: 962 RVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRR 1021
VVER NRT+ E R+M+ ++ L K FWAEA +T+ + N+ + + + + G+
Sbjct: 607 GVVERMNRTIMEKVRSMLCDSGLPKRFWAEATHTAVLLINKTPCSAINFEFPDKRWSGKA 666
Query: 1022 PNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHV 1081
P SY ++GC ++ K + +A++G+ +GY K Y+V+ E + S +V
Sbjct: 667 PIYSYLRRYGCVTFVHTDGG---KLNLRAKKGVLIGYPSGVKGYKVWLIEEKKCVVSRNV 723
Query: 1082 KFDDREPGSKTSEQSESNAGTTDSEDAS--ESDQPSDSEKYTEVESSPEAEITPEAESNS 1139
F + ++ E + D S + D +D + + E S +A++TP
Sbjct: 724 SFQENAVYKDLMQRKEQVSCEEDDHAGSYIDLDLEADKDNSSGGEQS-QAQVTPATRGAV 782
Query: 1140 EAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEESL 1199
+ P ++I D H+S L+ + R F E+
Sbjct: 783 TSTPPRYETDDIEETDV-------------HQSPLSYHLVRDRERREIRAPRRFDDEDYY 829
Query: 1200 IGLL------SIIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPFQKNIIG 1250
L +EP +EA+ D D W LAM EE+ +ND W V +P ++ IIG
Sbjct: 830 AEALYTTEDGDAVEPADYKEAVRDENWDKWRLAMNEEIESQLKNDTWTTVTRPEKQRIIG 889
Query: 1251 TKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHG 1309
++W+++ K G E R KARLVA+GY+Q+EG+DY E FAPV + +IR+LLS
Sbjct: 890 SRWIYKYKQGIPGVEEPRFKARLVAKGYAQREGVDYHEIFAPVVKHVSIRILLSIVAQEN 949
Query: 1310 IILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLS 1369
+ L Q+DVK+AFL+G ++E++Y+ P G E L + V L KSLYGLKQAPR W ++ +
Sbjct: 950 LELEQLDVKTAFLHGELKEKIYMMPPEGCESLFKENEVCLLNKSLYGLKQAPRQWNEKFN 1009
Query: 1370 NFLIKNDFERGQVDTTLFRKTLKKD-ILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEM 1428
+++ + F+R D+ + K L D + + YVDD++ ++N K + +FEM
Sbjct: 1010 HYMTEIGFKRSDYDSCAYTKKLSDDSTMYLLFYVDDMLVAANNMQAIDALKKELSIKFEM 1069
Query: 1429 SMMGELKFFMGIQINQSKEG--VYVHQTKYTKELLKKFKLEDCKMMNTPM--HPTCTLSK 1484
+G K +GI+I +E +++ Q Y ++LK F + + K TP+ H +
Sbjct: 1070 KDLGAAKKILGIEIIIDREAGVLWLSQESYLNKVLKTFNMLESKPALTPLGAHLKMKSAT 1129
Query: 1485 EDTGTVVDQKL----YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIF 1539
E+ + ++ + Y +GS++Y + +RPD+ + V + +RF S P + H VK +
Sbjct: 1130 EEKLSTEEEYMNSVPYSSAVGSIMYAMIGTRPDLAYPVGVVSRFMSQPAKEHWLGVKWVL 1189
Query: 1540 RYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQAT 1599
RY+KGT + L Y+++ D+ + G+CDADYA D +R+S +G LG N ISW S Q
Sbjct: 1190 RYIKGTVDTRLCYKRNSDFSICGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1249
Query: 1600 IAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAK 1659
+A S+ E EY+S + +W+K L+D+ ++ I+CD+ +AI LSKN + H R K
Sbjct: 1250 VAQSSTECEYMSLTEAVKEAIWLKGLLKDFGYEQKNVEIFCDSQSAIALSKNNVHHERTK 1309
Query: 1660 HIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF----DFIK 1705
HI++K HFIR+ + G +++ I TE ADIFTK L V +F DF++
Sbjct: 1310 HIDVKFHFIREIIADGKVEVSKISTEKNPADIFTKVLPVNKFQTALDFLR 1359
Score = 57.0 bits (136), Expect = 9e-08
Identities = 65/320 (20%), Positives = 126/320 (39%), Gaps = 55/320 (17%)
Query: 33 KFNGDPEEFSWWKTNMYSFI--MGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKK 90
KF+G + ++ WK + + I +GL L + + + D E + D + +
Sbjct: 10 KFDGRGD-YTMWKEKLLAHIDMLGLSAVLRE--SETPMGKERDSEKSDEDEKEEREKMEA 66
Query: 91 LYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL----MLV 146
+K K R IV S+ K+ +++A AM +L ++ +KAL L
Sbjct: 67 FEEKKRKARSTIVLSVSDRVLRKIKKETSAAAMLEAL-------DRLYMSKALPNRIYLK 119
Query: 147 HQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIE 206
+ F+M ++ SIE F +V+ L+ L D +L SLP + ++
Sbjct: 120 QKLYSFKMSENLSIEGNIDEFLHIVADLENLNVLVSDEDQAILLLMSLPKPFDQLKDTLK 179
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEES 266
+ LS++++ +++ E+ + S K ++ L
Sbjct: 180 YSSGKTVLSLDEVAAAIYSRELEFGSVKKSIKGQAEGL---------------------- 217
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIAD 326
+ +K E R ++K +G K K + ++GC+ C + GH +
Sbjct: 218 --------------YVKDKAENRGRSEQK---DKGKGKRSKSKSKRGCWICGEDGHLKST 260
Query: 327 CPDLQKEKFKGKSKKSSFNS 346
CP+ K +FK + +S
Sbjct: 261 CPNKNKPQFKNQGSNKGESS 280
>At2g07550 putative retroelement pol polyprotein
Length = 1356
Score = 546 bits (1406), Expect = e-155
Identities = 350/1062 (32%), Positives = 559/1062 (51%), Gaps = 56/1062 (5%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG--NS---SISINNV 724
W LD+GCS HMT ++ F GG V+ G ++ G GTI NS +I + NV
Sbjct: 309 WILDTGCSYHMTYKREWFHEFNEDAGGSVRMGNKTVSRVRGVGTIRVKNSDGLTIVLTNV 368
Query: 725 WLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NLLS+ F GY F + L K + G+R + +Y +N+ +A
Sbjct: 369 RYIPDMDRNLLSLGTFEKAGYK--FESEDGILRIKAGNQVLLTGRRYDTLYLLNWKPVAS 426
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKG-LPNIDYHSDALCGACQKGKI 843
+ + + +D +WH+RL H + K ++ + KG L S +C C GK
Sbjct: 427 ESLAVVKRADDTV-LWHQRLCHMS----QKNMEILVRKGFLDKKKVSSLDVCEDCIYGKA 481
Query: 844 VKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ SF S T LE +H DL+G P SL +Y + I+DD++R WV F+K+KD
Sbjct: 482 KRKSF-SLAHHDTKEKLEYIHSDLWGAPFVPLSLGKCQYFMSIIDDFTRKVWVYFMKTKD 540
Query: 903 YACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNR 962
A E F + ++++ + + +R+D+G EF N+ F+ FCE GI + TPQQN
Sbjct: 541 EAFEKFVEWVNLVENQTDRRVKTLRTDNGLEFCNKLFDGFCESIGIHRHRTCAYTPQQNG 600
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRP 1022
V ER NRT+ E R+M+ ++ L K FWAEA +T+ + N+ + + + + G P
Sbjct: 601 VAERMNRTIMEKVRSMLSDSGLPKRFWAEATHTTVLLINKTPSSALNFEIPDKKWSGNPP 660
Query: 1023 NISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVK 1082
SY ++GC ++ +T D K + +A++G+ +GY K Y+V+ + + S ++
Sbjct: 661 VYSYLRRYGCVAFV-HTDD--GKLEPRAKKGVLIGYPVGVKGYKVWILDERKCVVSRNII 717
Query: 1083 FDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAESNSEAE 1142
F + ++ E+ + T+ +D + S D E +V S + E+ N+
Sbjct: 718 FQENAVYKDLMQRQENVS--TEEDDQTGSYLEFDLEAERDVISGGDQEMV-----NTIPA 770
Query: 1143 PSSKVQNEIASEDFQDNTQQVIQ--PKFKHKSSHPEELIIGSKESPRRTRSHFRQEESLI 1200
P S V + ++D D+ + P H ++ I +PRR E+L
Sbjct: 771 PESPVVSTPTTQDTNDDEDSDVNQSPLSYHLVRDRDKREI---RAPRRFDDEDYYAEALY 827
Query: 1201 GLLS--IIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVF 1255
+EP+ +A D D W LAM EE++ ++N+ W +V +P + IIG +W+F
Sbjct: 828 TTEDGEAVEPENYRKAKLDANFDKWKLAMDEEIDSQEKNNTWTIVTRPENQRIIGCRWIF 887
Query: 1256 RNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQ 1314
+ KL G E R KARLVA+GY+Q+EGIDY E FAPV + +IR+LLS + L Q
Sbjct: 888 KYKLGILGVEEPRFKARLVAKGYAQKEGIDYHEIFAPVVKHVSIRVLLSIVAQEDLELEQ 947
Query: 1315 MDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIK 1374
+DVK+AFL+G ++E++Y+ P G+E + + V L K+LYGLKQAP+ W ++ NF+ +
Sbjct: 948 LDVKTAFLHGELKEKIYMSPPEGYESMFKANEVCLLNKALYGLKQAPKQWNEKFDNFMKE 1007
Query: 1375 NDFERGQVDTTLFRKTLKK-DILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGE 1433
F + D+ + K L ++ + IYVDDI+ S N + FEM +G
Sbjct: 1008 ICFVKSAYDSCAYTKVLPDGSVMYLLIYVDDILVASKNKEAITALKANLGMRFEMKDLGA 1067
Query: 1434 LKFFMGIQINQSKE-GV-YVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVV 1491
K +G++I + + GV ++ Q Y ++L+ + + + K TP+
Sbjct: 1068 AKKILGMEIIRDRTLGVLWLSQEGYLNKILETYNMAEAKPAMTPLGAHFKFQ-----AAT 1122
Query: 1492 DQKL-----------YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIF 1539
+QKL Y +GS++Y + +RPD+ + V + +RF S P + H VK +
Sbjct: 1123 EQKLIRDEDFMKSVPYSSAVGSIMYAMLGTRPDLAYPVGIISRFMSQPIKEHWLGVKWVL 1182
Query: 1540 RYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQAT 1599
RY+KGT L Y+KS + ++G+CDADYA D +R+S +G LG N ISW S Q
Sbjct: 1183 RYIKGTLKTRLCYKKSSSFSIVGYCDADYAADLDKRRSITGLVFTLGGNTISWKSGLQRV 1242
Query: 1600 IAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAK 1659
+A ST E+EY+S + +W+K L+D+ S+ I+CD+ +AI LSKN + H R K
Sbjct: 1243 VAQSTTESEYMSLTEAVKEAIWLKGLLKDFGYEQKSVEIFCDSQSAIALSKNNVHHERTK 1302
Query: 1660 HIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
HI++K+HFIR+ + G +++ I TE ADIFTK L+V +F
Sbjct: 1303 HIDVKYHFIREIISDGTVEVLKISTEKNPADIFTKVLAVSKF 1344
Score = 60.5 bits (145), Expect = 8e-09
Identities = 65/310 (20%), Positives = 125/310 (39%), Gaps = 55/310 (17%)
Query: 33 KFNGDPEEFSWWKTNMYSF--IMGLDEELWDILEDGVDDLDLDEEGAAIDRRIHTPAQKK 90
KF+G + ++ WK + + I+GL+ L + G LDE + ++ +
Sbjct: 10 KFDGRGD-YTMWKEKLLAHMDILGLNTALKESESTGEKKSVLDESDEDYEEKLEK--FEA 66
Query: 91 LYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL--MLVHQ 148
L +K K R IV S+ K+ +STA AM +L K+ +KAL + +
Sbjct: 67 LEEKKKKARSAIVLSVTDRVLRKIKKESTAAAMLLAL-------DKLYMSKALPNRIYPK 119
Query: 149 YEL--FRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIE 206
+L F+M ++ S+E F +++ L+ + D +L +LP + ++
Sbjct: 120 QKLYSFKMSENLSVEGNIDEFLQIITDLENMNVIISDEDQAILLLTALPKAFDQLKDTLK 179
Query: 207 EAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEES 266
+ + L+++++ +++ E+ L + S K ++ L K K K +
Sbjct: 180 YSSGKSILTLDEVAAAIYSKELELGSVKKSIKVQAEGLYVKDKNENKGKGEQKG------ 233
Query: 267 PDGDSDEDQSVKMAMLSNKLEYLARKQKKFLSKRGSYKNFKKEDQKGCFNCKKPGHFIAD 326
+G K K + + GC+ C + GHF +
Sbjct: 234 ---------------------------------KGKGKKGKSKKKPGCWTCGEEGHFRSS 260
Query: 327 CPDLQKEKFK 336
CP+ K +FK
Sbjct: 261 CPNQNKPQFK 270
>At2g13930 putative retroelement pol polyprotein
Length = 1335
Score = 533 bits (1372), Expect = e-151
Identities = 344/1069 (32%), Positives = 556/1069 (51%), Gaps = 65/1069 (6%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNV 724
W LD+GCS HMT K F G VK G + + G G+I S + + +V
Sbjct: 285 WVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKGIGSIKIRNSDGSQVILTDV 344
Query: 725 WLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NL+S+ D G F + L S KG++ + +Y ++ +
Sbjct: 345 RYMPNMTRNLISLGTLEDRG--CWFKSQDGILKIVKGCSTILKGQKRDTLYILD-GVTEE 401
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDA-LCGACQKGKI 843
+ + D+ +WH RLGH + K ++ + KG + + C C GK
Sbjct: 402 GESHSSAEVKDETALWHSRLGHMS----QKGMEILVKKGCLRREVIKELEFCEDCVYGKQ 457
Query: 844 VKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ SF V T L +H DL+G P N ASL S+Y + VDDYSR W+ F++ KD
Sbjct: 458 HRVSFAPAQHV-TKEKLAYVHSDLWGSPHNPASLGNSQYFISFVDDYSRKVWIYFLRKKD 516
Query: 903 YACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNR 962
A E F + ++++ + + K+R+D+G E+ N FE FC++ GI+ + TPQQN
Sbjct: 517 EAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFEKFCKEEGIVRHKTCAYTPQQNG 576
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRP 1022
+ ER NRT+ + R+M+ + + K FWAEA +T+ Y+ NR + E + G P
Sbjct: 577 IAERLNRTIMDKVRSMLSRSGMEKKFWAEAASTAVYLINRSPSTAINFDLPEEKWTGALP 636
Query: 1023 NISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVK 1082
++S +FGC YI + K + ++++GIF Y E K Y+V+ E + S +V
Sbjct: 637 DLSSLRKFGCLAYIHADQG---KLNPRSKKGIFTSYPEGVKGYKVWVLEDKKCVISRNVI 693
Query: 1083 FDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSE-----KYTEVESSPEAEITPE--- 1134
F ++ S++ +D ED + +D E T+ S+P T
Sbjct: 694 FREQVMFKDLKGDSQNTISESDLEDLRVNPDMNDQEFTDQGGATQDNSNPSEATTSHNPV 753
Query: 1135 -------AESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPR 1187
+ SE E S V++ + +D ++ I+ K+ S+ S++ +
Sbjct: 754 LNSPTHSQDEESEEEDSDAVEDLSTYQLVRDRVRRTIKANPKYNESNMVGFAYYSEDDGK 813
Query: 1188 RTRSHFRQEESLIGLLSIIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPF 1244
EPK+ +EAL D + W AM+EE+ +N WDLV KP
Sbjct: 814 P------------------EPKSYQEALLDPDWEKWNAAMKEEMVSMSKNHTWDLVTKPE 855
Query: 1245 QKNIIGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLS 1303
+ +IG +WVF K G E R ARLVA+G++Q+EG+DY E F+PV + +IR LLS
Sbjct: 856 KVKLIGCRWVFTRKAGIPGVEAPRFIARLVAKGFTQKEGVDYNEIFSPVVKHVSIRYLLS 915
Query: 1304 YAINHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRA 1363
+++ + L QMDVK+AFL+G +EEE+Y+ QP GFE + + V LK+SLYGLKQ+PR
Sbjct: 916 MVVHYNMELQQMDVKTAFLHGFLEEEIYMAQPEGFEIKRGSNKVCLLKRSLYGLKQSPRQ 975
Query: 1364 WYDRLSNFLIKNDFERGQVDTTLFRKTLKKDILI-VQIYVDDIIFGSSNASLCKEFSKLM 1422
W R F+ + R D+ ++ K D I + +YVDD++ S+N S E +L+
Sbjct: 976 WNLRFDEFMRGIKYTRSAYDSCVYFKKCNGDTYIYLLLYVDDMLIASANKSEVNELKQLL 1035
Query: 1423 QDEFEMSMMGELKFFMGIQINQSKEG--VYVHQTKYTKELLKKFKLEDCKMMNTPMHPTC 1480
EFEM +G+ K +G++I++ ++ + + Q Y K++L+ F++++ K ++TP+
Sbjct: 1036 SREFEMKDLGDAKKILGMEISRDRDAGLLTLSQEGYVKKVLRSFQMDNAKPVSTPLGIHF 1095
Query: 1481 TLS----KEDTGTVVDQKL--YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLT 1533
L KE K+ Y IGS++Y + +RPD+ +S+ + +RF S P + H
Sbjct: 1096 KLKAATDKEYEEQFERMKIVPYANTIGSIMYSMIGTRPDLAYSLGVISRFMSKPLKDHWQ 1155
Query: 1534 AVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWA 1593
AVK + RY++GT L +RK D+ L G+CD+DY + R+S +G +G N ISW
Sbjct: 1156 AVKWVLRYMRGTEKKKLCFRKQEDFLLRGYCDSDYGSNFDTRRSITGYVFTVGGNTISWK 1215
Query: 1594 SKRQATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPI 1653
SK Q +A+S+ EAEY++ + LW+K + + + + ++ D+ +AI L+KN +
Sbjct: 1216 SKLQKVVAISSTEAEYMALTEAVKEALWLKGFAAELGHSQDYVEVHSDSQSAITLAKNSV 1275
Query: 1654 LHSRAKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERFD 1702
H R KHI+I+ HFIRD + G++ + I TE A+IFTK + + +F+
Sbjct: 1276 HHERTKHIDIRLHFIRDIICAGLIKVVKIATECNPANIFTKTVPLAKFE 1324
Score = 33.5 bits (75), Expect = 1.1
Identities = 27/120 (22%), Positives = 54/120 (44%), Gaps = 4/120 (3%)
Query: 152 FRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTAIEEAKDL 211
F+M++++ I+E F +V+ L L+ +L SLP+R+ V ++ +
Sbjct: 100 FKMQENKKIDENIDDFLKIVADLNHLQIDVTDEVQAILLLSSLPARYDGLVETMKYSNSR 159
Query: 212 NTLSVEDLVSSL--KVHEMSLNEHETSKKSKSIALPSKGKTSKSSKAYKASESEEESPDG 269
L ++D++ + K E+S N + + P ++ +K S S +S DG
Sbjct: 160 EKLRLDDVMVAARDKERELSQNNRPVVEGHFARGRPDGKNNNQGNKGKNRSRS--KSADG 217
>At1g26990 polyprotein, putative
Length = 1436
Score = 533 bits (1372), Expect = e-151
Identities = 358/1057 (33%), Positives = 545/1057 (50%), Gaps = 79/1057 (7%)
Query: 668 RSWYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTIG-NSSISINNVWL 726
R+W +DSG S H+T E+ L+ T D V+ T KI GTG I ++S++NV
Sbjct: 419 RAWVIDSGASHHVTHERNLYHTYKALDRTFVRLPNGHTVKIEGTGFIQLTDALSLHNVLF 478
Query: 727 VDGLKHNLLSISQFCDNGYD-VTFSKTNCTLVNKDDKSITFKGKRVENVYKINFS-DLAD 784
+ K NLLS+S V+F+ C + + + KG +V N+Y +N L D
Sbjct: 479 IPEFKFNLLSVSVLTKTLQSKVSFTSDECMIQALTKELMLGKGSQVGNLYILNLDKSLVD 538
Query: 785 Q-----KVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDAL-CGAC 838
K VC N+ + +WHKRLGH ++ +KI L V LP + D+ C C
Sbjct: 539 VSSFPGKSVCSSVKNESE-MWHKRLGHPSF---AKIDTLSDVLMLPKQKINKDSSHCHVC 594
Query: 839 QKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIVDDYSRWTWVKFI 898
K FKS + + + EL+HID +GP + ++ +Y L IVDD+SR TW+ +
Sbjct: 595 HLSKQKHLPFKSVNHIR-EKAFELVHIDTWGPFSVPTVDSYRYFLTIVDDFSRATWIYLL 653
Query: 899 KSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTP 958
K K VF SF ++++ + VRSD+ E + ELF K GI + P TP
Sbjct: 654 KQKSDVLTVFPSFLKMVETQYHTKVCSVRSDNAHELKFN--ELFA-KEGIKADHPCPETP 710
Query: 959 QQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFK 1018
+QN VVERK++ L +AR ++ ++ + +W + V T+ ++ NR+ + +T YE
Sbjct: 711 EQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVFLINRLLSPVINNETPYERLT 770
Query: 1019 GRRPNISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEES 1078
+P+ S FGC CY + KFD +A+ IFLGY K Y++ + ET V S
Sbjct: 771 KGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGYPMGYKGYKLLDIETYSVSIS 830
Query: 1079 MHVKF-DDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEITPEAES 1137
HV F +D P + S D P++ E V+SS +A + S
Sbjct: 831 RHVIFYEDIFPFAS----SNITDAAKDFFPHIYLPAPNNDEHLPLVQSSSDAPHNHDESS 886
Query: 1138 NS---EAEPSSKVQNEIAS--EDFQ--DNTQQVIQPKFKHKSSHPEELIIGSKESPRRTR 1190
+ +EP S Q ++ S +DF +NT P S +P I
Sbjct: 887 SMIFVPSEPKSTRQRKLPSHLQDFHCYNNT-----PTTTKTSPYPLTNYI---------- 931
Query: 1191 SHFRQEESLIGLLSIIE----PKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQK 1246
S+ E ++II P+ EA D W AM +E++ F R W + P K
Sbjct: 932 SYSYLSEPFGAFINIITATKLPQKYSEARLDKVWNDAMGKEISAFVRTGTWSICDLPAGK 991
Query: 1247 NIIGTKWVFRNKLNEQGEVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAI 1306
+G KW+ K G + R+KARLVA+GY+QQEGID+ TF+PVA++ +++LLS A
Sbjct: 992 VAVGCKWIITIKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTVKVLLSLAP 1051
Query: 1307 NHGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYD 1366
L+Q+D+ +A LNG +EEE+Y+K PPG+ +++ G + +P A
Sbjct: 1052 KMKWYLHQLDISNALLNGDLEEEIYMKLPPGYSEIQ-------------GQEVSPNA--- 1095
Query: 1367 RLSNFLIKNDFERGQVDTTLFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEF 1426
+ D TLF K L+V +YVDDI+ S+ + E + + F
Sbjct: 1096 ------------KCHGDHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELTSQLSSFF 1143
Query: 1427 EMSMMGELKFFMGIQINQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKED 1486
++ +GE KFF+GI+I ++ +G+ + Q KY +LL DCK + PM P LSK D
Sbjct: 1144 QLRDLGEPKFFLGIEIARNADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPNQKLSK-D 1202
Query: 1487 TGTVV-DQKLYRGMIGSLLYLTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGT 1545
TGT++ D K YR ++G L YL +RPDI F+V A++ S P + HL A+ +I RYLKGT
Sbjct: 1203 TGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKILRYLKGT 1262
Query: 1546 TNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTA 1605
GL Y ++ L GF D+D+ R+ +G F+G +L+SW SK+Q ++MS+A
Sbjct: 1263 IGQGLFYGADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDVVSMSSA 1322
Query: 1606 EAEYISAASCCTQLLWMKHQLEDYQIN-ANSIPIYCDNTAAICLSKNPILHSRAKHIEIK 1664
EAEY + + +L+W+ + L ++I + +YCDN AA+ ++ N + H R KHIE
Sbjct: 1323 EAEYRAMSVATKELIWLGYILTAFKIPFTHPAYLYCDNEAALHIANNSVFHERTKHIEND 1382
Query: 1665 HHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
H +R+ ++ GIL F+ T++Q AD TKPL + F
Sbjct: 1383 CHKVRECIEAGILKTIFVRTDNQLADTLTKPLYPKPF 1419
>At2g21460 putative retroelement pol polyprotein
Length = 1333
Score = 528 bits (1361), Expect = e-150
Identities = 338/1064 (31%), Positives = 555/1064 (51%), Gaps = 61/1064 (5%)
Query: 670 WYLDSGCSRHMTGEKALFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNV 724
W +D+GCS HMT ++ F L GG V+ G K+ G GTI + + NV
Sbjct: 287 WVMDTGCSYHMTYKREWFEDLNEDAGGSVRMGNKTVSKVRGIGTIRVKNEAGMVVRLTNV 346
Query: 725 WLVDGLKHNLLSISQFCDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLAD 784
+ + NLLS+ F +GY +F N TL S+ +R +Y + + + +
Sbjct: 347 RYIPEMDRNLLSLGTFEKSGY--SFKLENGTLSIIAGDSVLLTVRRCYTLYLLQWRPVTE 404
Query: 785 QKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPNIDYHSDA-LCGACQKGKI 843
+ + ++ D +WH+RLGH + K L L KGL + S C C GK
Sbjct: 405 ESL-SVVKRQDDTILWHRRLGHMS----QKNMDLLLKKGLLDKKKVSKLETCEDCIYGKA 459
Query: 844 VKSSFKSKDIVSTSRPLELLHIDLFG-PVNTASLYGSKYGLVIVDDYSRWTWVKFIKSKD 902
+ F T LE +H DL+G P SL +Y + +DDY+R + F+K+KD
Sbjct: 460 KRIGFNLAQH-DTREKLEYVHSDLWGAPSVPFSLGKCQYFISFIDDYTRKVRIYFLKTKD 518
Query: 903 YACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNR 962
A + F + ++++ + I +R+D+G EF N F+ FC + GIL + TPQQN
Sbjct: 519 EAFDKFVEWANLVENQTDKRIKTLRTDNGLEFCNRSFDEFCSQKGILWHRTCAYTPQQNG 578
Query: 963 VVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRP 1022
V ER NRTL E R+M+ ++ L K FWAEA +T+ + N+ + + + + G+ P
Sbjct: 579 VAERMNRTLMEKVRSMLSDSGLPKKFWAEATHTTAILINKTPSSALNYEVPDKRWSGKSP 638
Query: 1023 NISYFHQFGCTCYILNTKDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVK 1082
SY +FGC ++ +T D K + +A++GI +GY K Y+++ E + S +V
Sbjct: 639 IYSYLRRFGCIAFV-HTDD--GKLNPRAKKGILVGYPIGVKGYKIWLLEEKKCVVSRNVI 695
Query: 1083 FDDREPGSKTSEQSESNAGTTDSEDASESDQPSDSEKYTEVESSPEAEIT-----PEAES 1137
F +++ S S+DA + + + Y +++ E IT P E+
Sbjct: 696 F----------QENASYKDMMQSKDAEKDENEAPPSSYLDLDLDHEEVITSGGDDPIVEA 745
Query: 1138 NSEAEPSSKVQNEIASEDFQDNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFRQEE 1197
S PS + SE T +IQ + +L+ R F E+
Sbjct: 746 QSPFNPSPAT-TQTYSEGVNSETD-IIQSPLSY------QLVRDRDRRTIRAPVRFDDED 797
Query: 1198 SLIGLLSI------IEPKTVEEA---LSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNI 1248
L L IEP EA ++ + W LAM EE+ +N W +V +P + +
Sbjct: 798 YLAEALYTTEDSGEIEPADYSEAKRSMNWNKWKLAMNEEMESQIKNHTWTVVKRPQHQKV 857
Query: 1249 IGTKWVFRNKLNEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAIN 1307
IG++W+++ KL G E R KARLVA+GY+Q++GIDY E FAPV + +IR+L+S
Sbjct: 858 IGSRWIYKFKLGIPGVEEGRFKARLVAKGYAQRKGIDYHEIFAPVVKHVSIRILMSIVAQ 917
Query: 1308 HGIILYQMDVKSAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDR 1367
+ L Q+DVK+AFL+G ++E++Y+ P G+E++ D V L KSLYGLKQAP+ W ++
Sbjct: 918 EDLELEQLDVKTAFLHGELKEKIYMVPPEGYEEMFKEDEVCLLNKSLYGLKQAPKQWNEK 977
Query: 1368 LSNFLIKNDFERGQVDTTLFRKTLKKDILI-VQIYVDDIIFGSSNASLCKEFSKLMQDEF 1426
+ ++ + F R D+ + K L + + +YVDD++ + N + + + F
Sbjct: 978 FNAYMSEIGFIRSLYDSCAYIKELSDGSRVYLLLYVDDMLVAAKNKEDISQLKEELSQRF 1037
Query: 1427 EMSMMGELKFFMGIQI--NQSKEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHP-----T 1479
+M +G K +G++I N+ + +++ Q Y ++L+ + + + K + TP+
Sbjct: 1038 DMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNKILETYNMAESKHVVTPLGAHLKMRA 1097
Query: 1480 CTLSKEDTGTVVDQKL-YRGMIGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKR 1537
T+ K++ + + Y +GS++Y + +RPD+ + V + +R+ S P H VK
Sbjct: 1098 ATVEKQEQDEDYMKSIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKW 1157
Query: 1538 IFRYLKGTTNLGLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQ 1597
+ RY+KG+ L Y++S D+K++G+CDAD+A + R+S +G LG + ISW S +Q
Sbjct: 1158 VLRYIKGSLGTKLQYKRSSDFKVVGYCDADHAACKDRRRSITGLVFTLGGSTISWKSGQQ 1217
Query: 1598 ATIAMSTAEAEYISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSR 1657
+A+ST EAEY+S + +WMK L+++ S+ I+CD+ +AI LSKN + H R
Sbjct: 1218 RVVALSTTEAEYMSLTEAVKEAVWMKGLLKEFGYEQKSVEIFCDSQSAIALSKNNVHHER 1277
Query: 1658 AKHIEIKHHFIRDYVQKGILDIQFIDTEHQWADIFTKPLSVERF 1701
KHI++++ +IRD + G D+ IDTE ADIFTK + V +F
Sbjct: 1278 TKHIDVRYQYIRDIIANGDGDVVKIDTEKNPADIFTKIVPVNKF 1321
Score = 48.9 bits (115), Expect = 3e-05
Identities = 56/226 (24%), Positives = 103/226 (44%), Gaps = 20/226 (8%)
Query: 33 KFNGDPEEFSWWKTNMYSF--IMGLDEELW--DILEDGVDDLDLDEEGAAIDRRIHTPAQ 88
KF+G + ++ WK + + I+GL L D L + V ++ L EE + + +
Sbjct: 10 KFDGRGD-YTMWKEKLMAHLDILGLSVALKEEDDLVEKVAEMQLTEE----EEKEEVLRR 64
Query: 89 KKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVKEAKAL--MLV 146
+ L +K K R IV S+ K+ + +A AM L K+ +KAL +
Sbjct: 65 ELLEEKRRKARSAIVLSVTDRVLRKIKKEQSAAAMLGVL-------DKLYMSKALPNRIY 117
Query: 147 HQYEL--FRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRWRPKVTA 204
+ +L F+M ++ SIE F +++ L+ D +L SLP +
Sbjct: 118 QKQKLYSFKMSENLSIEGNIDEFLRIIADLENTNVLVSDEDQAILLLMSLPKPFDQLRDT 177
Query: 205 IEEAKDLNTLSVEDLVSSLKVHEMSLNEHETSKKSKSIALPSKGKT 250
++ TLS++++V+++ E+ L ++ S K ++ L K KT
Sbjct: 178 LKYGLGRVTLSLDEVVAAIYSKELELGSNKKSIKGQAEGLFVKEKT 223
>At5g35820 copia-like retrotransposable element
Length = 1342
Score = 520 bits (1340), Expect = e-147
Identities = 343/1122 (30%), Positives = 574/1122 (50%), Gaps = 88/1122 (7%)
Query: 626 QKNKAATASEKTIPKGVKPKVLNDQKLLSIHPKVCLRAREKQRSWYLDSGCSRHMTGEKA 685
++NK + SE+ V +V D L + + A +W LD+GCS HMT K
Sbjct: 269 ERNKQGSTSERGEASTVTARV-TDAAALVVSRALLGFAEVTPDTWILDTGCSFHMTCRKD 327
Query: 686 LFLTLTMKDGGEVKFGGNQTGKIIGTGTI-----GNSSISINNVWLVDGLKHNLLSISQF 740
+ G+V+ G + ++ G G + S+I + +V + + NL+S+
Sbjct: 328 WIIDFKETASGKVRMGNDTYSEVKGIGDVRIKNEDGSTILLTDVRYIPEMSKNLISLGTL 387
Query: 741 CDNGYDVTFSKTNCTLVNKDDKSITFKGKRVENVYKINFSDLADQKVVCLLSMNDKKWVW 800
D G K T+ D +T GK+ +Y + + LA + V + D+ +W
Sbjct: 388 EDKGCWFESKKGILTIFKNDLTVLT--GKKESTLYFLQGTTLAGEANV-IDKEKDETSLW 444
Query: 801 HKRLGHANWRLISKISKLQLVKGLPNIDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPL 860
H RLGH + LQ++ ++D K + SF + V+ + L
Sbjct: 445 HSRLGHIGAK------GLQVLVSKGHLD-------------KNIMISFGAAKHVTKDK-L 484
Query: 861 ELLHIDLFGPVNTASLYGS-KYGLVIVDDYSRWTWVKFIKSKDYACEVFSSFCIQIQSEK 919
+ +H DL+G N G +Y + +DD++R TW+ FI++KD A F + QI++++
Sbjct: 485 DYVHSDLWGSTNVPFSIGKCQYFITFIDDFTRRTWIYFIRTKDEAFSKFVEWKTQIENQQ 544
Query: 920 ELNILKVRSDHGGEFENEPFELFCEKHGILHEFSSPRTPQQNRVVERKNRTLQEMARTMI 979
+ + + +D+G EF N+ F+ FC K G++ + TPQQN V ER NRT+ R M+
Sbjct: 545 DKKLKILITDNGLEFCNQEFDSFCRKEGVIRHRTCAYTPQQNGVAERMNRTIMNKVRCML 604
Query: 980 HENNLAKHFWAEAVNTSCYIQNRIYIRPMLEKTAYELFKGRRPNISYFHQFGCTCYILNT 1039
E+ L K FWAEA +T+ ++ N+ + E + G P+ +FG YI +
Sbjct: 605 SESGLGKQFWAEAASTAVFLINKSPSSSIEFDIPEEKWTGHPPDYKILKKFGSVAYIHSD 664
Query: 1040 KDYLKKFDAKAQRGIFLGYSERSKAYRVYNSETQCVEESMHVKFDDREPGSKTSEQSESN 1099
+ K + +A++GIFLGY + K ++V+ E + S + F + + + +
Sbjct: 665 QG---KLNPRAKKGIFLGYPDGVKRFKVWLLEDRKCVVSRDIVFQENQMYKELQKN---- 717
Query: 1100 AGTTDSEDASESDQPSDSEKYTEVES---SPEAEITPEAESNSEAEPSSKVQNEIASEDF 1156
D SE D+ + T +E S + E E NS E +S ++ AS+D
Sbjct: 718 -------DMSEEDKQLTEVERTLIELKNLSADDENQSEGGDNSNQEQASTTRS--ASKDK 768
Query: 1157 Q----DNTQQVIQPKFKHKSSHPEELIIGSKESPRRTRSHFR---QEESLIGLL------ 1203
Q D+ + E ++ R+ R+ R +++SL+G
Sbjct: 769 QVEETDSDDDCL-----------ENYLLARDRIRRQIRAPQRFVEEDDSLVGFALTMTED 817
Query: 1204 -SIIEPKTVEEALSD---DGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKL 1259
+ EP+T EEA+ + W A EE++ ++ND WD++ KP K +IG KW+F+ K
Sbjct: 818 GEVYEPETYEEAMRSPECEKWKQATIEEMDSMKKNDTWDVIDKPEGKRVIGCKWIFKRKA 877
Query: 1260 NEQG-EVTRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVK 1318
G E R KARLVA+G+SQ+EGIDY E F+PV + +IR LLS + + L Q+DVK
Sbjct: 878 GIPGVEPPRYKARLVAKGFSQREGIDYQEIFSPVVKHVSIRYLLSIVVQFDMELEQLDVK 937
Query: 1319 SAFLNGVIEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFE 1378
+AFL+G ++E + + QP G+ED + V LKKSLYGLKQ+PR W R +F+I + ++
Sbjct: 938 TAFLHGNLDEYILMSQPEGYEDEDSTEKVCLLKKSLYGLKQSPRQWNQRFDSFMINSGYQ 997
Query: 1379 RGQVDTTLFRKTLKKDILI-VQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFF 1437
R + + ++ + L I + +YVDD++ S N ++ + + EFEM +G +
Sbjct: 998 RSKYNPCVYTQQLNDGSYIYLLLYVDDMLIASQNKDQIQKLKESLNREFEMKDLGPARKI 1057
Query: 1438 MGIQINQSKE-GVY-VHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKL 1495
+G++I +++E G+ + Q++Y +L+ F ++ K+ TP+ L + T+
Sbjct: 1058 LGMEITRNREQGILDLSQSEYVAGVLRAFGMDQSKVSQTPLGAHFKLRAANEKTLARDAE 1117
Query: 1496 YRGM------IGSLLY-LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNL 1548
Y + IGS++Y + SRPD+ + V + +RF S P + H AVK + RY+KGT +
Sbjct: 1118 YMKLVPYPNAIGSIMYSMIGSRPDLAYPVGVVSRFMSKPSKEHWQAVKWVMRYMKGTQDT 1177
Query: 1549 GLLYRKSLDYKLIGFCDADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAE 1608
L ++K +++ G+CD+DYA D R+S +G G N ISW S Q +A+ST EAE
Sbjct: 1178 CLRFKKDDKFEIRGYCDSDYATDLDRRRSITGFVFTAGGNTISWKSGLQRVVALSTTEAE 1237
Query: 1609 YISAASCCTQLLWMKHQLEDYQINANSIPIYCDNTAAICLSKNPILHSRAKHIEIKHHFI 1668
Y++ A + +W++ + +++ + CD+ +AI LSKN + H R KHI++++HFI
Sbjct: 1238 YMALAEAVKEAIWLRGLAAEMGFEQDAVEVMCDSQSAIALSKNSVHHERTKHIDVRYHFI 1297
Query: 1669 RDYVQKGILDIQFIDTEHQWADIFTKPLSVERFDFIKKNLNM 1710
R+ + G + + I T ADIFTK + V + K L +
Sbjct: 1298 REKIADGEIQVVKISTTWNPADIFTKTVPVSKLQEALKLLRV 1339
Score = 52.8 bits (125), Expect = 2e-06
Identities = 57/250 (22%), Positives = 104/250 (40%), Gaps = 19/250 (7%)
Query: 28 SGKAP--KFNGDPEEFSWWKT-----NMYSFIMGLDEELWDILEDGVDDLDLDEEGAAID 80
SG+A KF+GD + W + M + GL EE ++ED ++ +G D
Sbjct: 3 SGRAEVEKFDGDGDYILWKEKLLAHMEMLGLLEGLGEEEEAVVEDSTTEIS---DGGNQD 59
Query: 81 RRIHTPA--QKKLYKKHHKIRGIIVASIPRTEYMKMSDKSTAKAMFASLCANFEGSKKVK 138
T K L +K K R I+ S+ K+ + TA M L F
Sbjct: 60 PETATSKLEDKILKEKRGKARSTIILSLGNNVLRKVIKQKTAAGMIKVLDQLFMAKSLPN 119
Query: 139 EAKALMLVHQYELFRMKDDESIEEMYSRFQTLVSGLQILKKSYVSSDHVSKILRSLPSRW 198
++ Y +M ++ ++EE + F L+S L+ +K D +L SLP ++
Sbjct: 120 RIYLKQRLYGY---KMSENMTMEENVNDFFKLISDLENVKVVVPDEDQAIVLLMSLPRQF 176
Query: 199 RPKVTAIEEAKDLNTLSVEDLVSSL--KVHEMSLNEHETSKKSKSIALPSKGKTSKSSKA 256
++ K TL +E++ S++ K+ E+ + S + + +G++ K
Sbjct: 177 DQLKETLKYCK--TTLHLEEITSAIRSKILELGASGKLLKNNSDGLFVQDRGRSETRGKG 234
Query: 257 YKASESEEES 266
++S +S
Sbjct: 235 PNKNKSRSKS 244
>At4g27210 putative protein
Length = 1318
Score = 504 bits (1299), Expect = e-142
Identities = 321/1046 (30%), Positives = 512/1046 (48%), Gaps = 93/1046 (8%)
Query: 710 GTGTIGNSS--ISINNVWLVDGLKHNLLSISQFC-DNGYDVTFSKTNCTLVNKDDKSITF 766
G+ + +SS + + +V + + +LLS+S+ D V F + +K K +
Sbjct: 220 GSTNLASSSGTVPLTDVLVCPSITKSLLSMSKLTQDFPCTVEFEYDGVRVNDKATKKLLL 279
Query: 767 KGKRVENVYKINFSDLADQKVVCLLSMNDKKWVWHKRLGHANWRLISKISKLQLVKGLPN 826
G + +Y + D Q + VWH+RLGH + +++
Sbjct: 280 MGSNRDGLYCLK-DDKQFQAFFSTRQRSASDEVWHRRLGHPHPQIL-------------- 324
Query: 827 IDYHSDALCGACQKGKIVKSSFKSKDIVSTSRPLELLHIDLFGPVNTASLYGSKYGLVIV 886
+PLE +H DL+GP S+ G +Y V +
Sbjct: 325 -------------------------------QPLERVHCDLWGPTTITSVQGFRYYAVFI 353
Query: 887 DDYSRWTWVKFIKSKDYACEVFSSFCIQIQSEKELNILKVRSDHGGEFENEPFELFCEKH 946
D YSR++W+ +K K +F +F ++++ I + D GGEF + F + H
Sbjct: 354 DHYSRFSWIYPLKLKSDFYNIFLAFHKLVENQLSQKISVFQCDGGGEFVSHKFLQHLQSH 413
Query: 947 GILHEFSSPRTPQQNRVVERKNRTLQEMARTMIHENNLAKHFWAEAVNTSCYIQNRIYIR 1006
GI + S P TPQQN + ERK+R L E+ +M+ ++++ FW EA T+ ++ N +
Sbjct: 414 GIQQQLSCPHTPQQNGLAERKHRHLVELGLSMLFQSHVPHKFWVEAFFTANFLINLLPTS 473
Query: 1007 PMLEKTA-YELFKGRRPNISYFHQFGCTCYILNTKDYLK-KFDAKAQRGIFLGYSERSKA 1064
+ E + YE ++P+ + FG C+ +DY + KF+ + + +FLGY+E+ K
Sbjct: 474 ALKESISPYEKLYDKKPDYTSLRSFGSACFP-TLRDYAENKFNPCSLKCVFLGYNEKYKG 532
Query: 1065 YRVYNSETQCVEESMHVKFDDRE-PGSKTSEQSESNAGT---------TDSEDASESDQP 1114
YR T + S HV FD+ P S T + T +DS S S P
Sbjct: 533 YRCLYPPTGRLYISRHVIFDESVYPFSHTYKHLHPQPRTPLLAAWLRSSDSPAPSTSTSP 592
Query: 1115 SD-SEKYTEVESSP----EAEITPEAESNSEAEPSSKVQNEIASEDFQDNTQQVIQPKFK 1169
S S +T + P + + P S +S + + S DF
Sbjct: 593 SSRSPLFTSADFPPLPQRKTPLLPTLVPISSVSHASNITTQ-QSPDFDSERTTDFDSASI 651
Query: 1170 HKSSHPEELIIGSKESPRR-----------TRSHFRQEESLIGL-------------LSI 1205
SSH + S+E+ ++ T H + +G+ +S
Sbjct: 652 GDSSHSSQAGSDSEETIQQASVNVHQTHASTNVHPMVTRAKVGISKPNPRYVFLSHKVSY 711
Query: 1206 IEPKTVEEALSDDGWILAMQEELNQFQRNDVWDLVPKPFQKNIIGTKWVFRNKLNEQGEV 1265
EPKTV AL GW AM EE+ W LVP +++G+KWVFR KL+ G +
Sbjct: 712 PEPKTVTAALKHPGWTGAMTEEIGNCSETQTWSLVPYKSDMHVLGSKWVFRTKLHADGTL 771
Query: 1266 TRNKARLVAQGYSQQEGIDYTETFAPVARLEAIRLLLSYAINHGIILYQMDVKSAFLNGV 1325
+ KAR+VA+G+ Q+EGIDY ET++PV R +RL+L A + QMDVK+AFL+G
Sbjct: 772 NKLKARIVAKGFLQEEGIDYLETYSPVVRTPTVRLVLHLATALNWDIKQMDVKNAFLHGD 831
Query: 1326 IEEEVYVKQPPGFEDLKHPDHVYKLKKSLYGLKQAPRAWYDRLSNFLIKNDFERGQVDTT 1385
++E VY+ QP GF D PDHV L KS+YGLKQ+PRAW+D+ S FL++ F + D +
Sbjct: 832 LKETVYMTQPAGFVDPSKPDHVCLLHKSIYGLKQSPRAWFDKFSTFLLEFGFFCSKSDPS 891
Query: 1386 LFRKTLKKDILIVQIYVDDIIFGSSNASLCKEFSKLMQDEFEMSMMGELKFFMGIQINQS 1445
LF +++++ +YVDD++ +++ + EF M+ MG+L +F+GIQ+ +
Sbjct: 892 LFIYAHNNNLILLLLYVDDMVITGNSSQTLTSLLAALNKEFRMTDMGQLHYFLGIQVQRQ 951
Query: 1446 KEGVYVHQTKYTKELLKKFKLEDCKMMNTPMHPTCTLSKEDTGTVVDQKLYRGMIGSLLY 1505
+ G+++ Q KY ++LL +E C + TP+ D +R + G L Y
Sbjct: 952 QNGLFMSQQKYAEDLLIAASMEHCTPLPTPLPVQLDRVPHQEELFSDPTYFRSIAGKLQY 1011
Query: 1506 LTASRPDILFSVCLCARFQSDPRESHLTAVKRIFRYLKGTTNLGLLYRKSLDYKLIGFCD 1565
LT +RPDI F+V + P S +KRI RY+KGT +G+ Y + L + D
Sbjct: 1012 LTLTRPDIQFAVNFVCQKMHQPTISDFHLLKRILRYIKGTITMGISYSRDSPTLLQAYSD 1071
Query: 1566 ADYAGDRIERKSTSGNCQFLGENLISWASKRQATIAMSTAEAEYISAASCCTQLLWMKHQ 1625
+D+ + R+S G C F+G NL+SW+SK+ T++ S+ EAEY S + +++LW+
Sbjct: 1072 SDWGNCKQTRRSVGGLCTFMGTNLVSWSSKKHPTVSRSSTEAEYKSLSDAASEILWLSTL 1131
Query: 1626 LEDYQINANSIP-IYCDNTAAICLSKNPILHSRAKHIEIKHHFIRDYVQKGILDIQFIDT 1684
L + +I P ++CDN +A+ L+ NP H+R KH +I HF+R+ V L ++ I
Sbjct: 1132 LRELRIPLPDTPELFCDNLSAVYLTANPAFHARTKHFDIDFHFVRERVALKALVVKHIPG 1191
Query: 1685 EHQWADIFTKPLSVERFDFIKKNLNM 1710
Q ADIFTK L E F ++ L +
Sbjct: 1192 SEQIADIFTKSLPYEAFIHLRGKLGV 1217
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.315 0.131 0.375
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,065,867
Number of Sequences: 26719
Number of extensions: 1775107
Number of successful extensions: 8103
Number of sequences better than 10.0: 416
Number of HSP's better than 10.0 without gapping: 177
Number of HSP's successfully gapped in prelim test: 242
Number of HSP's that attempted gapping in prelim test: 6421
Number of HSP's gapped (non-prelim): 1281
length of query: 1715
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1602
effective length of database: 8,299,349
effective search space: 13295557098
effective search space used: 13295557098
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 67 (30.4 bits)
Medicago: description of AC146757.2