BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146756.8 - phase: 0 /pseudo
(469 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g13250 hypothetical protein 414 e-116
At3g42100 putative protein 413 e-115
At2g14470 pseudogene 410 e-115
At1g52960 hypothetical protein 398 e-111
At3g31980 hypothetical protein 386 e-107
At1g35940 hypothetical protein 364 e-101
At3g30560 hypothetical protein 359 2e-99
At1g54430 hypothetical protein 350 1e-96
At3g30420 hypothetical protein 348 5e-96
At3g43350 putative protein 339 2e-93
At2g05080 putative helicase 335 4e-92
At2g14300 pseudogene; similar to MURA transposase of maize Muta... 332 3e-91
At3g31440 hypothetical protein 311 5e-85
At5g34960 putative protein 289 3e-78
At3g42420 putative protein 276 2e-74
At5g37110 putative helicase 209 3e-54
At3g51700 unknown protein 193 1e-49
At5g28780 putative protein 177 1e-44
At2g07620 putative helicase 171 6e-43
At3g51690 putative protein 169 2e-42
>At3g13250 hypothetical protein
Length = 1419
Score = 414 bits (1063), Expect = e-116
Identities = 232/466 (49%), Positives = 306/466 (64%), Gaps = 20/466 (4%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ IY++I V N+ GGVFF+YG+GG GKT++W LAA++RS+ I NVA+SGI +L
Sbjct: 943 EQRGIYDQITNAVFNDLGGVFFVYGFGGTGKTFIWKTLAAAVRSKGQICLNVASSGIASL 1002
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+C I+ ++LA+L+K+ LIIWDEAPM KFCFEAL K
Sbjct: 1003 LLEGGRTAHSRFSIPLNPDEFSVCKIKPKSDLADLIKEASLIIWDEAPMMSKFCFEALDK 1062
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEI------DLISSILQ*CLYIW 187
+ I+ + + N K+ ++ ++ I +++ S L Y+W
Sbjct: 1063 SFSDII----KRVDNKVFGGKV----MVFGGDFRQVLPVINGAGRAEIVMSSLN-ASYLW 1113
Query: 188 NHCQVLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELLI 245
+HC+VL+LTKNMRLLN+ E E FS+ +L VGDG++ E NDG I+I ELLI
Sbjct: 1114 DHCKVLRLTKNMRLLNNDLSVDEAKEIQEFSDWLLAVGDGRVNEPNDGEVIIDIPEELLI 1173
Query: 246 SNFTDPIEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKE 303
+PIEAI + Y + L D F + RAILA + V+ IN Y+L + EE+
Sbjct: 1174 QEADNPIEAISREIYGDPTKLHEISDPKFFQRRAILAPKNEDVNTINQYMLEHLDSEERI 1233
Query: 304 YFSSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLC 363
Y S+DSID S D +TP+FLN +K G+P+HS+ LKVG P+MLLRNLD GLC
Sbjct: 1234 YLSADSIDPSDSDSLKN-PVITPDFLNSIKVSGMPHHSLRLKVGAPVMLLRNLDPKGGLC 1292
Query: 364 NGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAI 423
NGTRL IT+L +H++E K+IT IG VYIP I+++PS PFK+ RRQF + V+F +
Sbjct: 1293 NGTRLQITQLCSHIVEAKVITGDRIGQIVYIPLINITPSDTKLPFKMRRRQFPLSVAFVM 1352
Query: 424 TINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
TINKSQGQSL+ VGLYLPK VFSH QLYVALSRV S GLKILI D
Sbjct: 1353 TINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKTGLKILILD 1398
>At3g42100 putative protein
Length = 1752
Score = 413 bits (1061), Expect = e-115
Identities = 235/466 (50%), Positives = 307/466 (65%), Gaps = 20/466 (4%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ IY+ I V N+ GGVFF+YG+GG GKT++W LAA++RSR IV NVA+SGI +L
Sbjct: 1275 EQRGIYDEITGAVFNDLGGVFFIYGFGGTGKTFIWKTLAAAVRSRGQIVLNVASSGIASL 1334
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+C I ++LA L+K+ LIIWDEAPM KFCFE+L K
Sbjct: 1335 LLEGGRTAHSRFAIPLNPDEFSVCKITPKSDLANLIKEASLIIWDEAPMMSKFCFESLDK 1394
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQE------EIDLISSILQ*CLYIW 187
+ IL N N K+ V+ ++ ++++ S L Y+W
Sbjct: 1395 SFYDIL----NNKDNKVFGGKV----VVFGGDFRQVLPVINGAGRVEIVMSSLN-ASYLW 1445
Query: 188 NHCQVLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELLI 245
+HC+VLKLTKNMRLL+ S E E +FS+ +L VGDG++ E NDG I+I ELLI
Sbjct: 1446 DHCKVLKLTKNMRLLSGGLSSEEAKEIQQFSDWLLAVGDGRINEPNDGEALIDIPEELLI 1505
Query: 246 SNFTDPIEAIVQSTYSNL--LENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKE 303
+PIEAI + Y + L D F + RAILA T + V+ IN Y+L + EE+
Sbjct: 1506 KEAGNPIEAISKEIYGDPSELHMINDPKFFQRRAILAPTNEDVNTINQYMLEHLKSEERI 1565
Query: 304 YFSSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLC 363
Y S+DSID + D A +TP+FLN ++ G+P+H++ LKVG P+MLLRNLD GLC
Sbjct: 1566 YLSADSIDPTDSDSL-ANPVITPDFLNSIQLTGMPHHALRLKVGAPVMLLRNLDPKGGLC 1624
Query: 364 NGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAI 423
NGTRL IT+LA V++ K+IT IG+ V IP I+++PS PFK+ RRQF + V+FA+
Sbjct: 1625 NGTRLQITQLAKQVVQAKVITRDRIGDIVLIPLINLTPSDTKLPFKMRRRQFPLSVAFAM 1684
Query: 424 TINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
TINKSQGQSL+ VGLYLPK VFSH QLYVALSRV S +GLKILI D
Sbjct: 1685 TINKSQGQSLEQVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILD 1730
>At2g14470 pseudogene
Length = 1265
Score = 410 bits (1055), Expect = e-115
Identities = 224/462 (48%), Positives = 303/462 (65%), Gaps = 12/462 (2%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ +YN I E V N GGVFF+YG+GG GKT++W L+A++R R IV NVA+SGI +L
Sbjct: 805 EQRGVYNEITEAVFNNLGGVFFVYGFGGTGKTFIWKTLSATIRYRDQIVLNVASSGIASL 864
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+C I+ ++LA L+K+ L+IWDEAPM +FCFEAL K
Sbjct: 865 LLEGGRTAHSRFGIPLNPDEFSVCKIKPKSDLANLVKKASLVIWDEAPMMSRFCFEALDK 924
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQE--EIDLISSILQ*CLYIWNHCQ 191
+ I+ +N N K+ + + +++ S L Y+W++C+
Sbjct: 925 SFSDII----KNTDNTVFGGKVVVFGGDFRQVFPVINGAGRAEIVMSSLN-ASYLWDNCK 979
Query: 192 VLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFT 249
VLKLTKN RLL + +E E FS+ +L VGDG++ E NDG I+I +LLI+N
Sbjct: 980 VLKLTKNTRLLANNLSETEAKEIQEFSDWLLAVGDGRINESNDGVAIIDIPEDLLITNAD 1039
Query: 250 DPIEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSS 307
PIE+I Y + +L D F + RAILAS + V+ IN Y+L+ + EE+ Y S+
Sbjct: 1040 KPIESITNEIYGDPKILHEITDPKFFQGRAILASKNEDVNTINEYLLDQLHAEERIYLSA 1099
Query: 308 DSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTR 367
DSID + D +TP+FLN +K GLPNHS+ LKVG P++LLRNLD GLCNGTR
Sbjct: 1100 DSIDPTDSDSLSN-PVITPDFLNSIKLPGLPNHSLRLKVGAPVLLLRNLDPKGGLCNGTR 1158
Query: 368 LTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINK 427
L IT+L ++E K+IT IG+ + IP ++++P+ PFK+ RRQF + V+F +TINK
Sbjct: 1159 LQITQLCTQIVEAKVITGDRIGHIILIPTVNLTPTNTKLPFKMRRRQFPLSVAFVMTINK 1218
Query: 428 SQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
S+GQSL+HVGLYLPK VFSH QLYVALSRV S +GLKILI D
Sbjct: 1219 SEGQSLEHVGLYLPKPVFSHGQLYVALSRVTSKKGLKILILD 1260
>At1g52960 hypothetical protein
Length = 924
Score = 398 bits (1023), Expect = e-111
Identities = 219/458 (47%), Positives = 302/458 (65%), Gaps = 17/458 (3%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK IY+ IM+ V +++GGVFF+YG+GG GKT++W +L+A++RS+ DI NVA+SGI AL
Sbjct: 475 EQKKIYDEIMDAVLHDRGGVFFVYGFGGTGKTFLWKLLSAAIRSKGDISLNVASSGIAAL 534
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ +SS C+I +G++L EL+K+ LIIWDE PM K CFE+L +
Sbjct: 535 LLDGGRTTHSRFGIPINPNESSTCNISRGSDLGELVKEANLIIWDETPMMSKHCFESLDR 594
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYIWNH 189
I+ N + K +L +EEI + + L YIW H
Sbjct: 595 TLRDIM----NNPGDKPFGGKGIVFGGDFRQVLPVINGAGREEI--VFAALN-SSYIWEH 647
Query: 190 CQVLKLTKNMRLL-NDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNF 248
C+VL+LTKNMRLL N + E FS+ IL VGDGK+ + NDG I+I E LI+
Sbjct: 648 CKVLELTKNMRLLANISEHEKRDIEYFSKWILDVGDGKISQPNDGIALIDIPEEFLINGD 707
Query: 249 TDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSD 308
DP+E+I+++ Y N +D F + RAIL T + V+ IN ++++++ GEE+ Y SSD
Sbjct: 708 NDPVESIIEAVYGNTFMEEKDPKFFQGRAILCPTNEDVNSINEHMMSMLDGEERIYLSSD 767
Query: 309 SIDRSKEDG--NDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGT 366
SID + NDA+ + +FLN ++ GLPNH + LKVG P+MLLRN+D +GLCNGT
Sbjct: 768 SIDPADTSSANNDAY---SADFLNSVRVSGLPNHCLRLKVGCPVMLLRNMDPNKGLCNGT 824
Query: 367 RLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITIN 426
RL +T++A+ VI+ + IT +G V IP + ++PS PFK+ RRQF + V+FA+TIN
Sbjct: 825 RLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTRLPFKMRRRQFPLSVAFAMTIN 884
Query: 427 KSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLK 464
KSQGQ+L+ VGLYLP+ VFSH QLYVA+SRV S G K
Sbjct: 885 KSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSKTGTK 922
>At3g31980 hypothetical protein
Length = 1099
Score = 386 bits (991), Expect = e-107
Identities = 218/468 (46%), Positives = 296/468 (62%), Gaps = 18/468 (3%)
Query: 11 MLDEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGI 70
M EQK IY+ I++ V GG+FF+YG+GG KT+MW L+A++R R I NVA+SGI
Sbjct: 618 MTSEQKGIYDEIIKAVLENSGGIFFVYGFGGTSKTFMWKTLSAAVRMRGLISVNVASSGI 677
Query: 71 VALLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEA 130
+LLL GGRT HSRF IP+ + C I ++LA +LK+ LIIWDEAPM ++CFE+
Sbjct: 678 ASLLLQGGRTAHSRFGIPINPDDFTTCHIVPNSDLANMLKEASLIIWDEAPMMSRYCFES 737
Query: 131 LYKNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYI 186
L ++ ++ N+ K+ +L + + EI L + Y+
Sbjct: 738 LDRSLNDVI----GNIDGKPFGGKVVVFGGDFRQVLPVIHGAGRAEIVLAALNSS---YL 790
Query: 187 WNHCQVLKLTKNMRLLNDQAQSSENTE--RFSE*ILKVGDGKLGEENDGYNDIEISNELL 244
W HC+VL LTKNMRL+++ E E FS +L VGDG++ E NDG I+I ELL
Sbjct: 791 WEHCKVLTLTKNMRLMSNDLDKDEAEEIKEFSNWLLAVGDGRVSEPNDGEVLIDIPEELL 850
Query: 245 ISNFTDPIEAIVQSTYSNL--LENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEK 302
I + DPIEAI ++ Y +L L+ D F + RAIL V+ IN+ +L+ + GE
Sbjct: 851 IKDANDPIEAITKAVYGDLDLLQPNNDPKFFQQRAILCPRNTDVNTINDIMLDKLNGELV 910
Query: 303 EYFSSDSIDRSKEDGNDAFEQV-TPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEG 361
Y S+DSID +D V TP+FLN +K GLPNH++ LK+GTP+MLLRN+D G
Sbjct: 911 TYLSADSID--PQDAASLNNPVLTPDFLNSIKLSGLPNHNLTLKIGTPVMLLRNIDPKGG 968
Query: 362 LCNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSF 421
LCNGTRL +T++ NH++E ++IT +G++V I +SPS PF++ RRQF I V+F
Sbjct: 969 LCNGTRLQVTQMGNHILEARVITGDRVGDKVIIIKSQISPSDTKLPFRMRRRQFPIAVAF 1028
Query: 422 AITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
A+TINKSQGQSL VG+YLPK VFSH QLYVALSRV S +GLK+LI D
Sbjct: 1029 AMTINKSQGQSLKEVGIYLPKPVFSHGQLYVALSRVTSKKGLKVLIVD 1076
>At1g35940 hypothetical protein
Length = 1678
Score = 364 bits (934), Expect = e-101
Identities = 208/460 (45%), Positives = 280/460 (60%), Gaps = 41/460 (8%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ +YN I E V N GGVFF+YG+GG GKT++W L+A++R R IV NVA+SGI +L
Sbjct: 1234 EQRGVYNAITEAVFNNLGGVFFVYGFGGTGKTFIWKTLSAAIRCRGQIVLNVASSGIASL 1293
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + S+ ++K ++++K T ++ + F
Sbjct: 1294 LLEGGRTAHSRFGIPLNHDEFSV-SLDKS--FSDIIKNTNNKVFGGKVVVFGGDFR---- 1346
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEIDLISSILQ*CLYIWNHCQVL 193
Q L + E+++ Y+W+HC+VL
Sbjct: 1347 -------------QVLPVINGAGRAEIVMSSLN----------------ASYLWDHCKVL 1377
Query: 194 KLTKNMRLL--NDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDP 251
KLTKNMRLL N A ++ + FS+ +L V DG++ E NDG I+I +LLI+N P
Sbjct: 1378 KLTKNMRLLANNLSATEAKEIQEFSDWLLAVSDGRINEPNDGVATIDIPEDLLITNADKP 1437
Query: 252 IEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDS 309
IE I Y + +L D F + RAILA + V+ IN Y+L + EE+ Y S+DS
Sbjct: 1438 IETITNEIYGDPKILHEITDPKFFQGRAILAPKNEDVNTINEYLLEQLDAEERIYLSADS 1497
Query: 310 IDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLT 369
ID + D + +TP+FLN +K GLPNHS+ LKVG P+MLLRNLD GLCNGTRL
Sbjct: 1498 IDPTDSDSLNN-PVITPDFLNSIKLPGLPNHSLCLKVGAPVMLLRNLDPKGGLCNGTRLQ 1556
Query: 370 ITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQ 429
IT+L ++E K+IT IGN V IP ++++P+ PFK+ RRQF + V+FA+TINKSQ
Sbjct: 1557 ITQLCTQIVEAKVITGDRIGNIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQ 1616
Query: 430 GQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
GQSL+H+GLYLPK VFSH QLYVALSRV S +GLKILI D
Sbjct: 1617 GQSLEHIGLYLPKPVFSHGQLYVALSRVTSKKGLKILILD 1656
>At3g30560 hypothetical protein
Length = 1473
Score = 359 bits (922), Expect = 2e-99
Identities = 214/467 (45%), Positives = 289/467 (61%), Gaps = 52/467 (11%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK +Y++IM+ V N KGG DI NVA+SGI +L
Sbjct: 1027 EQKKVYDKIMDAVLNNKGG---------------------------DICLNVASSGIASL 1059
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ ++S C++E+G++LAEL+ KLIIWDEAPM K+CFE+L K
Sbjct: 1060 LLEGGRTAHSRFGIPLTPHETSTCNMERGSDLAELVTAAKLIIWDEAPMMSKYCFESLDK 1119
Query: 134 NH*RIL*V*EENLQNLSLAEKL*Y--------LEVILDKYYQ*CQEEIDLISSILQ*CLY 185
+ IL +++ KL L VIL E+ + SS+ +
Sbjct: 1120 SLKDIL----STPEDMPFGGKLIIFGGDFRQILPVILA-----AGRELIVKSSLNS--SH 1168
Query: 186 IWNHCQVLKLTKNMRLLND-QAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELL 244
+W +C+V KLTKNMRLL D + E FS+ IL VG+GKL + NDG I+I +++L
Sbjct: 1169 LWQYCKVFKLTKNMRLLQDIDINEAREIEDFSKWILAVGEGKLNQPNDGVTQIQIRDDIL 1228
Query: 245 ISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEY 304
I +PIE+I+++ Y + +D F ++RAIL T V+ IN+++L+ + GEEK Y
Sbjct: 1229 IPEGDNPIESIIKAVYGTSFDEERDPKFFQDRAILCPTNDDVNSINDHMLSKLTGEEKIY 1288
Query: 305 FSSDSIDRS--KEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGL 362
SSDSID S + D N + TP+FLN +K GLPNH + LKVG P+MLLRNLD GL
Sbjct: 1289 RSSDSIDPSDTRADKNPVY---TPDFLNKIKISGLPNHLLWLKVGCPVMLLRNLDSHGGL 1345
Query: 363 CNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFA 422
NGTRL I RL + +++ +I+T +G V IP + ++PS PFK+ RRQF + V+FA
Sbjct: 1346 MNGTRLQIVRLGDKLVQGRILTGTRVGKLVIIPRMPLTPSDRRLPFKMKRRQFPLSVAFA 1405
Query: 423 ITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
+TINKSQGQSL +VG+YLPK VFSH QLYVA+SRVKS GLK+LI D
Sbjct: 1406 MTINKSQGQSLGNVGIYLPKPVFSHGQLYVAMSRVKSKGGLKVLITD 1452
>At1g54430 hypothetical protein
Length = 1639
Score = 350 bits (898), Expect = 1e-96
Identities = 205/466 (43%), Positives = 291/466 (61%), Gaps = 22/466 (4%)
Query: 13 DEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVA 72
++Q+ IY+ +++ V N++G +FFLYG GG GKT+++ + ++LRS V VA+S I A
Sbjct: 1153 EQQRIIYDDVLKSVINKEGKLFFLYGAGGTGKTFLYKTIISALRSNGKNVMPVASSAIAA 1212
Query: 73 LLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALY 132
LLLPGGRT HSRFKIP+ + SICDI+ G+ LA +L + LIIWDEAPMAH+ FEA+
Sbjct: 1213 LLLPGGRTAHSRFKIPINVHEDSICDIKIGSMLANVLSKVDLIIWDEAPMAHRHTFEAVD 1272
Query: 133 KNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYIWN 188
+ IL V +E + K L IL Q ++E +S+ + Y+W
Sbjct: 1273 RTLRDILSVGDEKALTKTFGGKTVLLGGDFRQILPVIPQGTRQE--TVSAAIN-RSYLWE 1329
Query: 189 HCQVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYND------IEISNE 242
C L++NMR+ ++ +F+E IL+VGDG+ + G +D I I
Sbjct: 1330 SCHKYLLSQNMRVQPEEI-------KFAEWILQVGDGEAPRKTHGIDDDQEEDNIIIDKN 1382
Query: 243 LLISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEK 302
LL+ +P+E + +S + + FQD + L+ A+L + VD+IN+Y+L+ +PG K
Sbjct: 1383 LLLPETENPLEVLCRSVFPDFTNTFQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAK 1442
Query: 303 EYFSSDSIDRSKEDGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEG 361
EYFS+DSIDR + + FE P E+LN L+ GLP H + LKVG PIMLLRNL+Q EG
Sbjct: 1443 EYFSADSIDRDEALTEEGFEMSYPMEYLNSLEFPGLPAHRLCLKVGVPIMLLRNLNQKEG 1502
Query: 362 LCNGTRLTITRLANHVIEVKIITE-KNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVS 420
LCNGTRL +T L + V++ +I+++ +V IP I +SP PF L RRQF + +
Sbjct: 1503 LCNGTRLIVTHLGDKVLKAEILSDTTKERKKVLIPRIILSPQDSKHPFTLRRRQFPVRMC 1562
Query: 421 FAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKIL 466
+A+TINKSQGQ+L+ V LYLPK VFSH QLYVALSRV S +GL +L
Sbjct: 1563 YAMTINKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVL 1608
>At3g30420 hypothetical protein
Length = 837
Score = 348 bits (892), Expect = 5e-96
Identities = 204/466 (43%), Positives = 291/466 (61%), Gaps = 22/466 (4%)
Query: 13 DEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVA 72
++Q+ IY+ +++ VTN++G +FFLYG GG GKT+++ + ++LRS V VA+S I A
Sbjct: 351 EQQRIIYDDVLKSVTNKEGKLFFLYGDGGTGKTFLYKTIISALRSNGKNVMPVASSAIAA 410
Query: 73 LLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALY 132
LLLPGGRT HS FKIP+ + ICDI+ G+ LA +L + LIIWDEAPMAH+ FEA+
Sbjct: 411 LLLPGGRTAHSWFKIPINVHEDFICDIKIGSMLANVLSKVDLIIWDEAPMAHRHTFEAVD 470
Query: 133 KNH*RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYIWN 188
+ IL V +E +L K L IL Q ++E +S+ + Y+W
Sbjct: 471 RTLRDILSVGDEKALTKTLGGKTVLLGGDFRQILPVIPQRTRQE--TVSAAIN-RSYLWE 527
Query: 189 HCQVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYND------IEISNE 242
C L++NMR+ ++ +F+E IL++GDG+ + G +D I I
Sbjct: 528 SCHKYLLSQNMRVQPEEI-------KFAEWILQIGDGEAPRKTHGIDDDQEEDNIIIDKN 580
Query: 243 LLISNFTDPIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEK 302
LL+ +P+E + QS + FQD + L+ A+L + VD+IN+Y+L+ +PG K
Sbjct: 581 LLLPETENPLEVLCQSVSPDFTNTFQDLENLKGTAVLTPRNETVDEINDYLLSKVPGLAK 640
Query: 303 EYFSSDSIDRSKEDGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEG 361
EYFS+DSID+ + + FE P E+LN L+ GLP H + LKVG PIMLLRNL+Q EG
Sbjct: 641 EYFSADSIDQDEALTEEGFEMSYPMEYLNSLEFPGLPAHRLCLKVGVPIMLLRNLNQKEG 700
Query: 362 LCNGTRLTITRLANHVIEVKIITE-KNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVS 420
LCNGTRLT+T L + V++ +I+++ +V IP I +SP PF L RRQF + +
Sbjct: 701 LCNGTRLTVTHLGDKVLKAEILSDTTKKRKKVLIPRIILSPQDSKHPFTLRRRQFPVRMC 760
Query: 421 FAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKIL 466
+A+T+NKSQGQ+L+ V LYLPK VFSH QLYVALSRV S +GL +L
Sbjct: 761 YAMTVNKSQGQTLNRVALYLPKPVFSHGQLYVALSRVTSPKGLTVL 806
>At3g43350 putative protein
Length = 830
Score = 339 bits (870), Expect = 2e-93
Identities = 201/455 (44%), Positives = 282/455 (61%), Gaps = 55/455 (12%)
Query: 16 KNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVALLL 75
K IY+ IM+VV +++GGVFF+YG+GG GKT++W +L+A++RS+ DI NVA+SGI AL L
Sbjct: 181 KKIYDEIMDVVLHDRGGVFFVYGFGGTGKTFLWKLLSAAVRSKGDISLNVASSGIAALRL 240
Query: 76 PGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYKNH 135
GGRT HSRF IP+ +SS C+I +G++L EL+K+ KLIIWDEAPM K CFE+L +
Sbjct: 241 DGGRTAHSRFDIPINPNESSTCNISRGSDLGELVKEAKLIIWDEAPMMSKHCFESLDRTL 300
Query: 136 *RIL*V*EENLQNLSLAEKL*YL----EVILDKYYQ*CQEEIDLISSILQ*CLYIWNHCQ 191
I+ N + L K+ +L +EEI + + L YIW H +
Sbjct: 301 KDIV----NNPGDKPLGGKVIVFGGDFRQVLPVINGAGREEI--VFAALN-SSYIWEHSK 353
Query: 192 VLKLTKNMRLLNDQAQSSE-NTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTD 250
VL+LTKNMRLL D ++ + + E FS+ IL VGDGK+ + NDG I+I E LI+ D
Sbjct: 354 VLELTKNMRLLADISEHEKRDIEDFSKWILDVGDGKISQPNDGIALIDIPEEFLINGDND 413
Query: 251 PIEAIVQSTYSNLLENFQDG---DF--LRNRAILASTIQVVDDINNYVLNLIPGEEKEYF 305
P+E+I+++ Y N +D D+ + RAIL T + V+ IN +++ ++ GEE+ Y
Sbjct: 414 PVESIIEAVYGNTFMEEKDPKKTDYPQYQGRAILCPTNEDVNSINEHMMRMLDGEERIYL 473
Query: 306 SSDSIDRSK-EDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCN 364
SSDSID + N+A +FLN ++ YGLPNH + LKVG P+MLLRN+D +GLCN
Sbjct: 474 SSDSIDPADISSANNA--AYLADFLNNVRVYGLPNHCLRLKVGCPVMLLRNMDPNKGLCN 531
Query: 365 GTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAIT 424
GTRL +T++ + +I+ + IT +FA+T
Sbjct: 532 GTRLQVTQMTDTIIQARFIT-----------------------------------AFAMT 556
Query: 425 INKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKS 459
INKSQGQ+L+ VGLYLP+ VFSH QLYVA+SRV S
Sbjct: 557 INKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTS 591
Score = 137 bits (346), Expect = 1e-32
Identities = 67/119 (56%), Positives = 90/119 (75%)
Query: 346 VGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLP 405
VG P+MLLRN+D +GLCNGTRL +T++A+ VI+ + IT +G V IP + ++P
Sbjct: 710 VGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPLDTR 769
Query: 406 WPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLK 464
PFK+ R+QF++ V+FA+TINKSQGQ+L+ VGLYLP+ VFSH QLYVA+SRV S G K
Sbjct: 770 LPFKMRRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTSKTGTK 828
Score = 136 bits (342), Expect = 3e-32
Identities = 65/114 (57%), Positives = 89/114 (78%)
Query: 346 VGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLP 405
+G P+MLLRN+D +GLCNGTRL +T++A+ VI+ + IT +G V IP + ++PS
Sbjct: 594 IGCPVMLLRNMDPNKGLCNGTRLQVTQMADTVIQARFITGNRVGKIVLIPRMLITPSDTR 653
Query: 406 WPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKS 459
PFK+ R+QF++ V+FA+TINKSQGQ+L+ VGLYLP+ VFSH QLYVA+SRV S
Sbjct: 654 LPFKMRRKQFALSVAFAMTINKSQGQTLESVGLYLPRPVFSHGQLYVAISRVTS 707
>At2g05080 putative helicase
Length = 1219
Score = 335 bits (858), Expect = 4e-92
Identities = 196/462 (42%), Positives = 280/462 (60%), Gaps = 44/462 (9%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK++Y+ I+ V GGVFF+YG+GG GKT++W L+A+LRS+ DIV NVA+SGI +L
Sbjct: 750 EQKSVYDNIIGAVNENVGGVFFVYGFGGTGKTFLWKTLSAALRSKGDIVLNVASSGIASL 809
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSR IP+ + + C+++ G++ A L+K+ LIIWDEAPM + CFE+L +
Sbjct: 810 LLEGGRTAHSRSGIPLNPNEFTTCNMKAGSDRANLVKEASLIIWDEAPMMSRHCFESLDR 869
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEI------DLISSILQ*CLYIW 187
+ I N N K+ V+ ++ I D++ + L Y+W
Sbjct: 870 SLSDIC----GNCDNKPFGGKV----VVFGGDFRQVLPVIPGADTADIVMAALN-SSYLW 920
Query: 188 NHCQVLKLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISN 247
+HC+VL LTKNM L ++ E IL VGDG++GE NDG I+I +E LI+
Sbjct: 921 SHCKVLTLTKNMCLFSE------------EWILAVGDGRIGEPNDGEALIDIPSEFLITK 968
Query: 248 FTDPIEAIVQSTYSNLLENFQDGD--FLRNRAILASTIQVVDDINNYVLNLIPGEEKEYF 305
DPI+AI Y ++ + + D F + RAIL T + V+ IN +L+ + GEE +
Sbjct: 969 AKDPIQAICTEIYGDITKIHEQKDPVFFQERAILCPTNEDVNQINETMLDNLQGEELTFL 1028
Query: 306 SSDSIDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNG 365
SSDS+D + + G+ +TPEFLN +K GL NH + LK+G+P+MLLRN+D GL NG
Sbjct: 1029 SSDSLDTA-DIGSRNNPVLTPEFLNNVKVLGLSNHKLRLKIGSPVMLLRNIDPIGGLMNG 1087
Query: 366 TRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITI 425
TRL I +++ +++ I+T ++ PF++ R Q + V FA+TI
Sbjct: 1088 TRLQIMQMSPFILQAMILTGDRADTKL--------------PFRMRRTQLPLAVCFAMTI 1133
Query: 426 NKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILI 467
NKSQGQSL VG++LP+ FSH QLYVA+SRV S GLKILI
Sbjct: 1134 NKSQGQSLKRVGIFLPRPCFSHSQLYVAISRVTSKSGLKILI 1175
>At2g14300 pseudogene; similar to MURA transposase of maize Mutator
transposon
Length = 1230
Score = 332 bits (851), Expect = 3e-91
Identities = 196/439 (44%), Positives = 274/439 (61%), Gaps = 36/439 (8%)
Query: 14 EQKNIYN-RIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVA 72
E K +Y+ IM+ V N+KGGVFFLY +GG GKT++W +L+A++R + D NVA+S I +
Sbjct: 822 EHKKVYHDEIMDDVLNDKGGVFFLYAFGGTGKTFLWKVLSAAIRCKGDTCLNVASSSIAS 881
Query: 73 LLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDE-APMAHKFCFEAL 131
LLL GGRT HSRF IP+ ++S C++E+G++LAEL+ KLIIWDE P K L
Sbjct: 882 LLLEGGRTAHSRFGIPLTPHETSTCNMERGSDLAELVTAAKLIIWDEDMPFGRKVI---L 938
Query: 132 YKNH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEIDLISSILQ*CLYIWNHCQ 191
+ R + L + A + E+I+ L SS Y+W HC+
Sbjct: 939 FGGDFRQI------LHVIPAAGR----ELIVKS---------SLNSS------YLWQHCK 973
Query: 192 VLKLTKNMRLLND-QAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTD 250
VLKLTKNMRLL D + E F + IL VG+GKL E +DG I+I +++LI +
Sbjct: 974 VLKLTKNMRLLQDIDINEAREIEDFLKWILTVGEGKLNEPSDGVTHIQIPDDILIPEGDN 1033
Query: 251 PIEAIVQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSI 310
PIE+I+++ Y +D F +++AIL T V+ IN+++L+ + GEE+ Y SS+SI
Sbjct: 1034 PIESIIKAVYGTTFAQKRDPKFFQHKAILCPTNDDVNSINDHMLSKLTGEERIYRSSNSI 1093
Query: 311 DRS--KEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRL 368
D S + D N + TP+FLN +K GL NH + LKVG P+MLLRN GL NGTRL
Sbjct: 1094 DPSDTRADKNPIY---TPDFLNKIKISGLANHLLRLKVGCPVMLLRNFYPHGGLMNGTRL 1150
Query: 369 TITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKS 428
I RL + +++ +I+T +G V IP +S++PS PFK+ RR F + V+FA+TINKS
Sbjct: 1151 QIVRLGDKLVQGRILTGTRVGKLVIIPRMSLTPSDRRLPFKMKRRHFPLSVAFAMTINKS 1210
Query: 429 QGQSLDHVGLYLPKDVFSH 447
QGQSL +VG+YLPK VFSH
Sbjct: 1211 QGQSLGNVGMYLPKAVFSH 1229
>At3g31440 hypothetical protein
Length = 536
Score = 311 bits (797), Expect = 5e-85
Identities = 191/439 (43%), Positives = 260/439 (58%), Gaps = 44/439 (10%)
Query: 41 GIGKTYMWNILAASLRSRKDIVFNVATSGIVALLLPGGRTVHSRFKIPVPTLQSSICDIE 100
G KT +W L A++R R IV N+A+SGI +LLL GGRT HSRF I + + S+C I+
Sbjct: 110 GTWKTIIWKTLFAAIRRRDQIVLNMASSGIASLLLEGGRTAHSRFGIRLNPDEFSVCKIK 169
Query: 101 KGTELAELLKQTKLIIWDEAPMAHKFCFEALYKNH*RIL*V*EENLQNLSLAEKL*YLEV 160
++LA L+K+ L+I D+APM +FCFEAL K+ I+ +N N K+ V
Sbjct: 170 PKSDLANLVKEASLVICDKAPMMSRFCFEALDKSFSDII----KNTYNKVFGGKV----V 221
Query: 161 ILDKYYQ*CQEEI------DLISSILQ*CLYIWNHCQVLKLTKNMRLLNDQAQSSENTE- 213
+ ++ I +++ S L Y+W+HC+VLKLTKNMRLL + +E E
Sbjct: 222 VFSGDFRQVLPVINGAGRAEIVMSSLN-ASYLWDHCKVLKLTKNMRLLANNLSETEAKEI 280
Query: 214 -RFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDPIEAIVQSTYSN--LLENFQDG 270
FS+ +L VGDG++ E ND I+I +LLI+N PIE I Y + +L D
Sbjct: 281 HEFSDWLLAVGDGRINEPNDDVAIIDIPKDLLITNADKPIEWITNEIYGDPKILHEITDP 340
Query: 271 DFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTPEFLN 330
F + RAILA + V+ IN Y+L + EE+ Y S+DSID + D + +TP+FLN
Sbjct: 341 KFFQGRAILAPKNEDVNTINEYLLEQLHAEERIYLSADSIDPTDSDSLNN-PVITPDFLN 399
Query: 331 CLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEKNIGN 390
+K G GLCNG RL IT+L ++E K+IT IG+
Sbjct: 400 SIKLPG------------------------GLCNGARLQITQLFTEIVEAKVITGDRIGH 435
Query: 391 QVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSHEQL 450
V IP ++++P+ PFK+ RRQF + V+FA+TINKSQGQSL+HVGLYLPK VFSH QL
Sbjct: 436 IVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINKSQGQSLEHVGLYLPKPVFSHGQL 495
Query: 451 YVALSRVKSNEGLKILIHD 469
YVALSRV S +GLKILI D
Sbjct: 496 YVALSRVTSKKGLKILILD 514
>At5g34960 putative protein
Length = 1033
Score = 289 bits (739), Expect = 3e-78
Identities = 184/459 (40%), Positives = 241/459 (52%), Gaps = 102/459 (22%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQ+ +YN I E V N + IV NVA+SGI +L
Sbjct: 652 EQRGVYNEITEAVFN----------------------------NLDQIVLNVASSGIASL 683
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF I + + S+C I+ ++LA L+K+ L+IWDEAPM +
Sbjct: 684 LLEGGRTAHSRFGISLNPDEFSVCKIKPKSDLANLVKEASLVIWDEAPMMSR-------- 735
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEIDLISSILQ*CLYIWNHCQVL 193
Q L + E+++ Y+W+HC+VL
Sbjct: 736 -------------QVLLVINGAGRAEIVMSSLN----------------ASYLWDHCKVL 766
Query: 194 KLTKNMRLLNDQAQSSENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDPIE 253
K+ E NDG I+I +LLI+N PIE
Sbjct: 767 KIN--------------------------------EPNDGVAIIDIPEDLLITNTDKPIE 794
Query: 254 AIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSID 311
+I Y + +L D F + RAILA T + V+ IN Y+L + EE+ Y S+DSID
Sbjct: 795 SITNEIYGDPKILHEITDPKFFQGRAILAPTNEDVNTINEYLLEQLHAEERIYLSADSID 854
Query: 312 RSKEDGNDAFEQV-TPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTI 370
+ D N V TP+FLN +K GLPNHS+ LKV P+MLLRNLD GLCNGTRL I
Sbjct: 855 PT--DSNSLNNPVITPDFLNSIKLAGLPNHSLRLKVSAPVMLLRNLDPKGGLCNGTRLQI 912
Query: 371 TRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQG 430
T+L ++E K+IT IG+ V IP ++++P+ PFK+ RRQF + V+FA+TIN SQG
Sbjct: 913 TQLCTQIVEAKVITGDIIGHIVLIPTVNLTPTDTKLPFKMRRRQFPLSVAFAMTINTSQG 972
Query: 431 QSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
QSL+HVGLYLPK VFSH QLYVALSRV S +GLK LI D
Sbjct: 973 QSLEHVGLYLPKAVFSHGQLYVALSRVTSKKGLKFLILD 1011
>At3g42420 putative protein
Length = 1018
Score = 276 bits (705), Expect = 2e-74
Identities = 165/420 (39%), Positives = 239/420 (56%), Gaps = 73/420 (17%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
E++ +Y+ I V + GGVFF+YG+GG KT++W L+A++RSR DIV NVA++GI +L
Sbjct: 668 EKRGVYDEITGAVFKDLGGVFFVYGFGGTRKTFIWKTLSAAIRSRGDIVLNVASNGIASL 727
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEALYK 133
LL GGRT HSRF IP+ + + C I+ ++LA L+++ LIIWDEAP+ K+CFE+L K
Sbjct: 728 LLEGGRTAHSRFSIPLTPDEYTSCRIKPKSDLANLIRKASLIIWDEAPVMSKWCFESLDK 787
Query: 134 NH*RIL*V*EENLQNLSLAEKL*YLEVILDKYYQ*CQEEIDLISSILQ*CLYIWNHCQVL 193
+ + ++I +K + +HC+VL
Sbjct: 788 S----------------------FSDIIGNKDNK--------------------DHCKVL 805
Query: 194 KLTKNMRLLNDQAQSSE--NTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDP 251
KLTKNMRLL+ E + + FS+ +L VG+ P
Sbjct: 806 KLTKNMRLLSKDLSEEEAKDIKEFSDWLLAVGN--------------------------P 839
Query: 252 IEAIVQSTYSN--LLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDS 309
IEAI Y + +L+ +D F R IL+ T V IN Y+LN + GEE+ + S+DS
Sbjct: 840 IEAISHEIYGDPAMLKVNEDQKFFLKRVILSPTNDDVHTINQYMLNNMEGEERIFLSADS 899
Query: 310 IDRSKEDGNDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLT 369
ID S D +TP+ LN +K GLP+H + LK+G PI+LLRNLD GLCNGTRL
Sbjct: 900 IDPSDSDSLKN-PVITPDLLNSIKLSGLPHHELRLKIGAPIILLRNLDPKGGLCNGTRLQ 958
Query: 370 ITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQ 429
IT++ V++ K+I G+ V IP I+++PS + PF++ RRQF + ++FA+TINKSQ
Sbjct: 959 ITQMTIQVLQAKVIIGDRSGDIVLIPLINITPSNMKLPFRMRRRQFPVSLAFAMTINKSQ 1018
>At5g37110 putative helicase
Length = 1307
Score = 209 bits (531), Expect = 3e-54
Identities = 116/259 (44%), Positives = 164/259 (62%), Gaps = 3/259 (1%)
Query: 209 SENTERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDPIEAIVQSTYSNLLENFQ 268
+++ + FSE IL VGDG++ E NDG I I +E LI+ DPIEAI Y ++ + +
Sbjct: 1035 AKDIKEFSEWILAVGDGRIVEPNDGEALIVIPSEFLITKAKDPIEAICTEIYGDITKIHE 1094
Query: 269 DGD--FLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTP 326
D F + +AIL T + V+ IN +L+ + GEE + SSDS+D + G + +TP
Sbjct: 1095 QNDPIFFQEKAILCPTNEDVNQINETMLDNLQGEEFTFLSSDSLDPADIGGKNN-PALTP 1153
Query: 327 EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEK 386
+FLN +K LPNH + LK+G P+MLLRN+D GL NGTRL IT++ +++ I+T
Sbjct: 1154 DFLNSVKVSRLPNHKLRLKIGCPVMLLRNIDPIGGLMNGTRLRITQMGPFILQAMILTGD 1213
Query: 387 NIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFS 446
G+ V IP + ++PS PF++ R Q + V FA+TINKSQGQSL VG++L + FS
Sbjct: 1214 RAGHLVLIPRLKLAPSDTKLPFRMRRTQLPLAVCFAMTINKSQGQSLKRVGIFLLRPCFS 1273
Query: 447 HEQLYVALSRVKSNEGLKI 465
H QLYVA+SRV S LKI
Sbjct: 1274 HGQLYVAISRVTSKTRLKI 1292
Score = 76.3 bits (186), Expect = 3e-14
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 33/118 (27%)
Query: 14 EQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGIVAL 73
EQK+IY+ I+ V G V F+YG+GG
Sbjct: 920 EQKSIYDDIIGAVNENVGVVVFVYGFGGT------------------------------- 948
Query: 74 LLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEAL 131
GGRT HSRF IP+ + + C+++ G++ A L+K+ LIIWDEAPM ++CFE+L
Sbjct: 949 --EGGRTAHSRFGIPLNPNEFTTCNMKVGSDRANLVKEASLIIWDEAPMMSRYCFESL 1004
>At3g51700 unknown protein
Length = 344
Score = 193 bits (491), Expect = 1e-49
Identities = 113/275 (41%), Positives = 162/275 (58%), Gaps = 5/275 (1%)
Query: 198 NMRLLNDQAQSSENT--ERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDPIEAI 255
+M LL+ T E F++ I +G + + NDG I+I +LLI+ DPI+ I
Sbjct: 41 DMVLLDSSGTKIHTTIDEAFTKWITNIGGENINKPNDGETKIDIHEDLLITECKDPIKTI 100
Query: 256 VQSTYSNLLENFQDGDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKE 315
V Y + DF + RAIL T V D+IN+Y+L+ + GEE + + +D+I +
Sbjct: 101 VDEVYGESFTESYNPDFYQERAILCHTNDVADEINDYMLSQLQGEETKCYGADTIYPTHA 160
Query: 316 DGNDAFEQVTP-EFLNCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLA 374
ND + + P EFLN +K G P+ + LKVG P+MLLR+L L GTRL ITR+
Sbjct: 161 SPND--KMLYPLEFLNSIKIPGFPDFKLRLKVGAPVMLLRDLAPYGWLRKGTRLQITRVE 218
Query: 375 NHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLD 434
V+E IIT N G +V IP I + +P K+ RRQF + ++FA+TI++SQ Q+L
Sbjct: 219 TFVLEAMIITGNNHGEKVLIPRIPSDLREAKFPIKMRRRQFPVKLAFAMTIDESQRQTLS 278
Query: 435 HVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
VG+YLP+ + H Q YVA+S+VKS GLK+LI D
Sbjct: 279 KVGIYLPRQLLFHGQRYVAISKVKSRAGLKVLITD 313
>At5g28780 putative protein
Length = 337
Score = 177 bits (449), Expect = 1e-44
Identities = 107/260 (41%), Positives = 144/260 (55%), Gaps = 1/260 (0%)
Query: 211 NTERFSE*ILKVGDGKLGE-ENDGYNDIEISNELLISNFTDPIEAIVQSTYSNLLENFQD 269
NT R VG+G E D +E+ + + + ++ + + Y + +
Sbjct: 52 NTSRHCTCCYNVGNGNAPTCETDDGEVVEMDTSFFLKHNGNRLQQVTKGAYVQFSVSQPN 111
Query: 270 GDFLRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTPEFL 329
+L R IL + VD+IN Y+L+ + G+ KEY SS SI ++ G D ++L
Sbjct: 112 FQYLTERGILTPHNEYVDEINAYMLSQVGGDSKEYLSSYSIGKADTIGADYEALYHVKYL 171
Query: 330 NCLKTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEKNIG 389
N L+ LP H I LK G PIM +RN +Q EGLCNGTRL +T L VIE +I+T + G
Sbjct: 172 NSLEFPSLPKHKISLKKGVPIMQMRNFNQKEGLCNGTRLIVTNLGEQVIEAQIVTGTHAG 231
Query: 390 NQVYIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSHEQ 449
V IP +SP + PF L R+QF + V +A+TI K+QGQSL LYLP VFSH Q
Sbjct: 232 KMVSIPRFILSPPQSEHPFTLRRQQFPMRVCYAMTIIKNQGQSLKSDVLYLPNPVFSHVQ 291
Query: 450 LYVALSRVKSNEGLKILIHD 469
LYVALSRV S GL IL D
Sbjct: 292 LYVALSRVTSPIGLTILHGD 311
>At2g07620 putative helicase
Length = 1241
Score = 171 bits (434), Expect = 6e-43
Identities = 90/172 (52%), Positives = 117/172 (67%), Gaps = 5/172 (2%)
Query: 300 EEKEYFSSDSIDRSKEDG--NDAFEQVTPEFLNCLKTYGLPNHSIILKVGTPIMLLRNLD 357
E Y S+DSID N F TP FLN +K GL NH++ LK+GTP+MLL+N+D
Sbjct: 1050 ESITYLSADSIDPQDPASLNNPVF---TPYFLNSIKLSGLSNHNLTLKIGTPVMLLKNID 1106
Query: 358 QAEGLCNGTRLTITRLANHVIEVKIITEKNIGNQVYIPGISMSPSKLPWPFKLVRRQFSI 417
GLCNGTRL +T++ NH++E ++IT + ++V I +SPS PF++ RRQF I
Sbjct: 1107 PKGGLCNGTRLQVTQMGNHILEARVITGDRVRDKVIIIKAQISPSDTKLPFRMRRRQFPI 1166
Query: 418 VVSFAITINKSQGQSLDHVGLYLPKDVFSHEQLYVALSRVKSNEGLKILIHD 469
V+FA+ I KSQGQSL V +YLP+ VFSH QLYVALSRV S +GLK+LI D
Sbjct: 1167 AVAFAMRIKKSQGQSLKEVEIYLPRPVFSHGQLYVALSRVTSKKGLKVLIVD 1218
Score = 146 bits (369), Expect = 2e-35
Identities = 84/205 (40%), Positives = 118/205 (56%), Gaps = 11/205 (5%)
Query: 11 MLDEQKNIYNRIMEVVTNEKGGVFFLYGYGGIGKTYMWNILAASLRSRKDIVFNVATSGI 70
M EQK IY+ IM+ V GG+FF+YG+GG GKT+MW L+A++R + I NVA+SGI
Sbjct: 847 MTSEQKEIYDEIMKAVLENSGGIFFVYGFGGTGKTFMWKTLSAAVRMKGLISVNVASSGI 906
Query: 71 VALLLPGGRTVHSRFKIPVPTLQSSICDIEKGTELAELLKQTKLIIWDEAPMAHKFCFEA 130
LLL GGRT HSRF IP+ + C I ++LA +LK+ LIIWDEAPM ++CFE+
Sbjct: 907 AFLLLQGGRTAHSRFGIPINPDDFTTCHIVPNSDLANMLKEASLIIWDEAPMMSRYCFES 966
Query: 131 LYKNH*RIL*V*EENLQNLSLAEKL*Y----LEVILDKYYQ*CQEEIDLISSILQ*CLYI 186
L ++ ++ N+ K+ +L + + EI L + Y+
Sbjct: 967 LDRSLNDVI----GNVDGKPFGGKVVVFGGDFRQVLHVIHGAGRAEIVLAALNSS---YL 1019
Query: 187 WNHCQVLKLTKNMRLLNDQAQSSEN 211
W HC VL LTKNM L+ ++S N
Sbjct: 1020 WEHCNVLTLTKNMSLILFCCKNSNN 1044
>At3g51690 putative protein
Length = 374
Score = 169 bits (429), Expect = 2e-42
Identities = 100/258 (38%), Positives = 147/258 (56%), Gaps = 29/258 (11%)
Query: 213 ERFSE*ILKVGDGKLGEENDGYNDIEISNELLISNFTDPIEAIVQSTYSNLLENFQDGDF 272
E S I+ + + NDG +I+IS +LLI+ DPI+ +++ Y + DF
Sbjct: 57 EALSRWIMNISGDNINNPNDGETEIDISKDLLITESKDPIKTLLKEVYGEYFAKSYNPDF 116
Query: 273 LRNRAILASTIQVVDDINNYVLNLIPGEEKEYFSSDSIDRSKEDGNDAFEQVTPEFLNCL 332
+ AIL VD IN+Y+L+L+PGEEKE S+DSI S D D F V E LN +
Sbjct: 117 CHDSAILCHRDDDVDQINDYMLSLLPGEEKECLSTDSISPSPND--DMF--VPLEVLNSI 172
Query: 333 KTYGLPNHSIILKVGTPIMLLRNLDQAEGLCNGTRLTITRLANHVIEVKIITEKNIGNQV 392
K GLP+ + LKVG P+MLLR+LD + G G ++
Sbjct: 173 KVPGLPDFKLRLKVGAPVMLLRDLDPSRG------------------------NKHGKKI 208
Query: 393 YIPGISMSPSKLPWPFKLVRRQFSIVVSFAITINKSQGQSLDHVGLYLPKDVFSH-EQLY 451
+IP I+ P++ +P ++ R Q+ + ++FA+TI++SQ +L VGLYLP+ VFSH Q++
Sbjct: 209 WIPRIASYPTETNFPLQMRRTQYPLKLAFAMTIDESQVHTLSKVGLYLPRQVFSHGRQMF 268
Query: 452 VALSRVKSNEGLKILIHD 469
VA+S+VKS GLK+LI D
Sbjct: 269 VAISKVKSRAGLKVLITD 286
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.328 0.144 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,631,891
Number of Sequences: 26719
Number of extensions: 400337
Number of successful extensions: 1419
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1287
Number of HSP's gapped (non-prelim): 78
length of query: 469
length of database: 11,318,596
effective HSP length: 103
effective length of query: 366
effective length of database: 8,566,539
effective search space: 3135353274
effective search space used: 3135353274
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)
Medicago: description of AC146756.8