BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146755.8 + phase: 0 /pseudo
(1711 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g45230 putative non-LTR retroelement reverse transcriptase 794 0.0
At2g01840 putative non-LTR retroelement reverse transcriptase 749 0.0
At2g25550 putative non-LTR retroelement reverse transcriptase 734 0.0
At2g17910 putative non-LTR retroelement reverse transcriptase 719 0.0
At2g31520 putative non-LTR retroelement reverse transcriptase 715 0.0
At4g09710 RNA-directed DNA polymerase -like protein 692 0.0
At1g24640 hypothetical protein 677 0.0
At1g47910 reverse transcriptase, putative 668 0.0
At2g05200 putative non-LTR retroelement reverse transcriptase 653 0.0
At3g31420 hypothetical protein 644 0.0
At2g16680 putative non-LTR retroelement reverse transcriptase 635 0.0
At4g10830 putative protein 627 e-179
At3g32110 non-LTR reverse transcriptase, putative 564 e-160
At2g41580 putative non-LTR retroelement reverse transcriptase 562 e-160
At3g45550 putative protein 535 e-152
At2g11240 pseudogene 525 e-148
At2g31080 putative non-LTR retroelement reverse transcriptase 498 e-141
At1g25430 hypothetical protein 434 e-121
At2g17610 putative non-LTR retroelement reverse transcriptase 411 e-114
At4g15590 reverse transcriptase like protein 409 e-114
>At2g45230 putative non-LTR retroelement reverse transcriptase
Length = 1374
Score = 794 bits (2051), Expect = 0.0
Identities = 471/1374 (34%), Positives = 710/1374 (51%), Gaps = 63/1374 (4%)
Query: 354 MSFIVWNCRGLGSPSTVPTLKYLVRTYKPEGIFLSETMAALNKIEELKYILSFDSCFTVD 413
M + WNC+G+G+ TV L+ + Y PE IFL ET N +E + L F TV+
Sbjct: 1 MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIFLCETKKRRNYLENVVGHLGFFDLHTVE 60
Query: 414 RIGRGGGLAFLWKNSANCTITNFSQNHIDVEVDDLLIGK---WRLTGFYGMPENGRRKES 470
IG+ GGLA +WK+S + + ID LLI + + LT YG P R E
Sbjct: 61 PIGKSGGLALMWKDSVQIKVLQSDKRLIDA----LLIWQDKEFYLTCIYGEPVQAERGEL 116
Query: 471 WAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMTG 530
W L L + S PW + GDFN+++ EK G R FRQ + GL++++ +G
Sbjct: 117 WERLTRLGLSRSGPWMLTGDFNELVDPSEKIGGPARKESSCLEFRQMLNSCGLWEVNHSG 176
Query: 531 YAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLWLTCKPVTAV 590
Y F+W+ + V+ +LDR + N W +FP A L SDH PL +
Sbjct: 177 YQFSWYGNRND-ELVQCRLDRTVANQAWMELFPQAKATYLQKICSDHSPL---INNLVGD 232
Query: 591 N-RNPHRFKFENAWLAEPDFKQQVQQRWKLYPEEG---ITQKLSYCAEDLTDWSRNNNNF 646
N R FK++ W+ FK + W + + +K++ C +++ W R
Sbjct: 233 NWRKWAGFKYDKRWVQREGFKDLLCNFWSQQSTKTNALMMEKIASCRREISKWKR----- 287
Query: 647 RRDISKVQK--KIEKLRTHVTAANVSY------FNSLKNKLDKLLVQDDLFWKQRAKTFW 698
+SK +I++L+ + AA LK +L + ++ FW+++++ W
Sbjct: 288 ---VSKPSSAVRIQELQFKLDAATKQIPFDRRELARLKKELSQEYNNEEQFWQEKSRIMW 344
Query: 699 YKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFTKLS-ST 757
+ GD NTK+FHAA +RR NRI+ L + G +++L +A YF LF
Sbjct: 345 MRNGDRNTKYFHAATKNRRAQNRIQKLIDEEGREWTSDEDLGRVAEAYFKKLFASEDVGY 404
Query: 758 RADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWNMCG 817
+ + + +SD N L A T EE + A FS+ KCPGPDG N YQ FW G
Sbjct: 405 TVEELENLTPLVSDQMNNNLLAPITKEEVQRATFSINPHKCPGPDGMNGFLYQQFWETMG 464
Query: 818 SEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVLANR 877
+I + + +G +N TNI LIPK M D+RPI+LCNV+YK++ K++ANR
Sbjct: 465 DQITEMVQAFFRSGSIEEGMNKTNICLIPKILKAEKMTDFRPISLCNVIYKVIGKLMANR 524
Query: 878 LKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAYDRL 937
LK +L IS +Q+AFV GR I DN L+A EL+H + + K S+ +A+K DISKAYDR+
Sbjct: 525 LKKILPSLISETQAAFVKGRLISDNILIAHELLHALSSNNKCSEEFIAIKTDISKAYDRV 584
Query: 938 DWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSPYLF 997
+W +L M + F++ WIR IM CV++V Y VL+NG G +IP RG+RQGDPLSPYLF
Sbjct: 585 EWPFLEKAMRGLGFADHWIRLIMECVKSVRYQVLINGTPHGEIIPSRGLRQGDPLSPYLF 644
Query: 998 ILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMKNILT 1057
++C E L +++ AE++ ITG ++ AP ISHLLFADD + + +++ + I+
Sbjct: 645 VICTEMLVKMLQSAEQKNQITGLKVARGAPPISHLLFADDSMFYCKVNDEALGQIIRIIE 704
Query: 1058 TYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSKKAT 1117
Y ASGQ +N KS +Y ++ E + + LG+++ G G YLGLP SK AT
Sbjct: 705 EYSLASGQRVNYLKSSIYFGKHISEERRCLVKRKLGIEREGGEGVYLGLPESFQGSKVAT 764
Query: 1118 FKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNA 1177
++KDR+ ++ W S LS G+EIL+K+V ++P+Y MS F +P T +IE ++
Sbjct: 765 LSYLKDRLGKKVLGWQSNFLSPGGKEILLKAVAMALPTYTMSCFKIPKTICQQIESVMAE 824
Query: 1178 FWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITK 1237
FWW N RG+HW +W LS PK GG+GFK + AFN+A++GKQ W++I+ DSL+ K
Sbjct: 825 FWW-KNKKEGRGLHWKAWCHLSRPKAVGGLGFKEIEAFNIALLGKQLWRMITEKDSLMAK 883
Query: 1238 LLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQPWL--K 1295
+ K++YF SD +A +G PS+ W+S++ + +K G++ IG GETI+VW PW+ K
Sbjct: 884 VFKSRYFSKSDPLNAPLGSRPSFAWKSIYEAQVLIKQGIRAVIGNGETINVWTDPWIGAK 943
Query: 1296 DPLCLQPVTEVQIMWDAL-----TVGHLFKPNTKEWNENFIRYVFNAETSNQILQTPLLQ 1350
Q V ++ V L P+ ++WN N + +F T IL
Sbjct: 944 PAKAAQAVKRSHLVSQYAANSIHVVKDLLLPDGRDWNWNLVSLLFPDNTQENILALRPGG 1003
Query: 1351 SVQVDKATWRFEKNGLYSVRSAY---REIINRND---VLLQHRVPGKWNIIWNLKLPPKI 1404
D+ TW + ++G YSV+S Y EIIN+ + +LQ + + IW L +PPKI
Sbjct: 1004 KETRDRFTWEYSRSGHYSVKSGYWVMTEIINQRNNPQEVLQPSLDPIFQQIWKLDVPPKI 1063
Query: 1405 KNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCWQRLGFWP 1464
+FLWR NCL L + + +C C +H E HL F C + W
Sbjct: 1064 HHFLWRCVNNCLSVASNLAYRHLAREKSCVRCPSHGETVNHLLFKCPFARLTWAISPLPA 1123
Query: 1465 SIQQIWSHNAF-----CADIIFSLLQQLDIAHQQIFAVTLWSLWRHRNNKVWNNIVETTE 1519
W+ + F + S ++ D H + LW LW++RN+ V+ T
Sbjct: 1124 PPGGEWAESLFRNMHHVLSVHKSQPEESD--HHALIPWILWRLWKNRNDLVFKGREFTAP 1181
Query: 1520 EIGDRAVAFLNSWKAAQETRIRSSPANPHFDISKWSKPSVGRFKCNVDAAFSASLHRVGF 1579
++ +A +++W +E + + + + + KW PS G KCN D A+S L G
Sbjct: 1182 QVILKATEDMDAWNNRKEPQPQVTSSTRDRCV-KWQPPSHGWVKCNTDGAWSKDLGNCGV 1240
Query: 1580 GACIRDANGNHVISRTECFTPLLDVEMGEAIGLLHAMRWA----KDLNLVNMDFETDSKV 1635
G +R+ G + V E + A+RWA N + FE+DS+
Sbjct: 1241 GWVLRNHTGRLLWLGLRALPSQQSVLETE----VEALRWAVLSLSRFNYRRVIFESDSQY 1296
Query: 1636 VVENIYKGDGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAAHNLAREALN 1689
+V I + I D R+LL +F RR+ N+ A ARE+L+
Sbjct: 1297 LVSLIQNEMDIPSLAPRIQDIRNLL-RHFEEVKFQFTRREGNNVADRTARESLS 1349
>At2g01840 putative non-LTR retroelement reverse transcriptase
Length = 1715
Score = 749 bits (1934), Expect = 0.0
Identities = 457/1389 (32%), Positives = 690/1389 (48%), Gaps = 72/1389 (5%)
Query: 343 GGAWSPGPPRKMSFIVWNCRGLGSPSTVPTLKYLVRTYKPEGIFLSETMAALNKIEELKY 402
GGA + P ++ F WNC+GLG P TV L+ + R Y + +FL ET N +L
Sbjct: 354 GGAGTTTSPMRVGF--WNCQGLGQPLTVRRLEEVQRVYFLDMLFLIETKQQDNYTRDLGV 411
Query: 403 ILSFDSCFTVDRIGRGGGLAFLWKNSANCTITNFSQNHIDVEVDDLLIGKWRLTGFYGMP 462
+ F+ + G GGL WK + + + +D+ V+ + L+ YG P
Sbjct: 412 KMGFEDMCIISPRGLSGGLVVYWKKHLSIQVISHDVRLVDLYVEYKNFNFY-LSCIYGHP 470
Query: 463 ENGRRKESWAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDAG 522
R W L+ ++ S PW + GDFN+IL+ EKKG R+ ++ F +
Sbjct: 471 IPSERHHLWEKLQRVSAHRSGPWMMCGDFNEILNLNEKKGGRRRSIGSLQNFTNMINCCN 530
Query: 523 LFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLWL 582
+ DL G ++W +E LDR +NSDW FP E L SDH P+ +
Sbjct: 531 MKDLKSKGNPYSWVGKRQN-ETIESCLDRVFINSDWQASFPAFETEFLPIAGSDHAPVII 589
Query: 583 TCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRWKLYPEE---GITQKLSYCAEDLTDW 639
R +F+++ DF VQ+ W + G +KL C ++L W
Sbjct: 590 DIAEEVCTKRG--QFRYDRRHFQFEDFVDSVQRGWNRGRSDSHGGYYEKLHCCRQELAKW 647
Query: 640 SRNNNNFRRDISKVQKKIEKLRTHVTAANVSY------FNSLKNKLDKLLVQDDLFWKQR 693
R R + +KIE L+ V AA + L+ L++ ++L+W +
Sbjct: 648 KR------RTKTNTAEKIETLKYRVDAAERDHTLPHQTILRLRQDLNQAYRDEELYWHLK 701
Query: 694 AKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFTK 753
++ W GD NT FF+A+ R+ NRI+ + ++ G ++D + +A NYF+ LFT
Sbjct: 702 SRNRWMLLGDRNTMFFYASTKLRKSRNRIKAITDAQGIENFRDDTIGKVAENYFADLFTT 761
Query: 754 L-SSTRADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNF 812
+S ++IS +A +++ N L + T +E + A F++ AD+ PG DGF FY +
Sbjct: 762 TQTSDWEEIISGIAPKVTEQMNHELLQSVTDQEVRDAVFAIGADRAPGFDGFTAAFYHHL 821
Query: 813 WNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAK 872
W++ G+++ + E+ V +N T I LIPK M D+RPI+LC YK+++K
Sbjct: 822 WDLIGNDVCLMVRHFFESDVMDNQINQTQICLIPKIIDPKHMSDYRPISLCTASYKIISK 881
Query: 873 VLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISK 932
+L RLK L IS SQ+AFVPG++I DN LVA EL+H +K++ + G VA+K DISK
Sbjct: 882 ILIKRLKQCLGDVISDSQAAFVPGQNISDNVLVAHELLHSLKSRRECQSGYVAVKTDISK 941
Query: 933 AYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPL 992
AYDR++W +L +MIQ+ F+ +W++WIM CV +V Y VL+NG G + P RGIRQGDPL
Sbjct: 942 AYDRVEWNFLEKVMIQLGFAPRWVKWIMTCVTSVSYEVLINGSPYGKIFPSRGIRQGDPL 1001
Query: 993 SPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVM 1052
SPYLF+ CAE LS ++R AE I G +I AISHLLFADD F RAS Q +
Sbjct: 1002 SPYLFLFCAEVLSNMLRKAEVNKQIHGMKITKDCLAISHLLFADDSLFFCRASNQNIEQL 1061
Query: 1053 KNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGR 1112
I YE ASGQ IN KS + + PT + R+ LG+ V G GKYLGLP +GR
Sbjct: 1062 ALIFKKYEEASGQKINYAKSSIIFGQKIPTMRRQRLHRLLGIDNVRGGGKYLGLPEQLGR 1121
Query: 1113 SKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIE 1172
K F+++ ++ R W+ LS AG+EI+IK++ ++P Y M+ FLLP+ EI
Sbjct: 1122 RKVELFEYIVTKVKERTEGWAYNYLSPAGKEIVIKAIAMALPVYSMNCFLLPTLICNEIN 1181
Query: 1173 KMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPD 1232
++ AFWWG + G +GFK L FN A++ KQAW++++NP
Sbjct: 1182 SLITAFWWGKENE-------------------GDLGFKDLHQFNRALLAKQAWRILTNPQ 1222
Query: 1233 SLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQP 1292
SL+ +L K Y+P++ Y A+ G + SY W S+ + L+ GL+ +G G+T +W P
Sbjct: 1223 SLLARLYKGLYYPNTTYLRANKGGHASYGWNSIQEGKLLLQQGLRVRLGDGQTTKIWEDP 1282
Query: 1293 WLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAETSNQILQTPLLQSV 1352
WL P I+ + + V L++ N +EW+ V N E L
Sbjct: 1283 WL--PTLPPRPARGPILDEDMKVADLWRENKREWDPVIFEGVLNPEDQQLAKSLYLSNYA 1340
Query: 1353 QVDKATWRFEKNGLYSVRSAY----------REIINRNDVLLQHRVPGKWNIIWNLKLPP 1402
D W + +N Y+VRS Y EIIN L+ VP K IW LK+ P
Sbjct: 1341 ARDSYKWAYTRNTQYTVRSGYWVATHVNLTEEEIINP----LEGDVPLKQE-IWRLKITP 1395
Query: 1403 KIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCWQRLGF 1462
KIK+F+WR L T +L ++ + PTC C N +E H+ F CS + W+ F
Sbjct: 1396 KIKHFIWRCLSGALSTTTQLRNRNIPADPTCQRCCNADETINHIIFTCSYAQVVWRSANF 1455
Query: 1463 WPSIQQIWSHNAFCADIIFSLL-----QQLDIAHQQIFAVTLWSLWRHRNNKVWNNIVET 1517
S + ++ N + I +L Q L I + + +W LW+ RN ++ +
Sbjct: 1456 SGSNRLCFTDN--LEENIRLILQGKKNQNLPILNGLMPFWIMWRLWKSRNEYLFQQLDRF 1513
Query: 1518 TEEIGDRAVAFLNSW--KAAQETRIRSSPA----NPHFDISKWSKPSVGRFKCNVDAAFS 1571
++ +A W +T I + A P +WS P G KCN D+ +
Sbjct: 1514 PWKVAQKAEQEATEWVETMVNDTAISHNTAQSNDRPLSRSKQWSSPPEGFLKCNFDSGYV 1573
Query: 1572 ASLHRVGFGACIRDANGNHVISRTECFTPLLDVEMGEAIGLLHAMRWAKDLNLVNMDFET 1631
G +RD NG + S EA+G LHA++ + FE
Sbjct: 1574 QGRDYTSTGWILRDCNGRVLHSGCAKLQQSYSALQAEALGFLHALQMVWIRGYCYVWFEG 1633
Query: 1632 DSKVVVENIYKGDGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAAHNLAREALNHA 1691
D+ + I K + +++D R MT L S + ++ R+ N AA L + A + +
Sbjct: 1634 DNLELTNLINKTEDHHLLETLLYDIR-FWMTKLPFSSIGYVNRERNLAADKLTKYANSMS 1692
Query: 1692 SFHYHLNIP 1700
S + ++P
Sbjct: 1693 SLYETFHVP 1701
>At2g25550 putative non-LTR retroelement reverse transcriptase
Length = 1750
Score = 734 bits (1894), Expect = 0.0
Identities = 451/1356 (33%), Positives = 694/1356 (50%), Gaps = 39/1356 (2%)
Query: 363 GLGSPSTVPTLKYLVRTYKPEGIFLSETMAALNKIEELKYILSFDSCFTVDRIGRGGGLA 422
G+G P T L L R Y + +FL ET+ +K+ +L Y L F + T GR GGLA
Sbjct: 391 GIGMPLTQSRLFRLFRMYNYDILFLVETLNQCDKVCKLAYDLGFPNVITQPPNGRSGGLA 450
Query: 423 FLWKNSANCTITNFSQNHIDVEVDDLLIGKWRLTGFYGMPENGRRKESWAFLKNLARTSS 482
+WKN+ + ++ + + ID V + L+ YG P R + W L++++ +
Sbjct: 451 LMWKNNVSLSLISQDERLIDSHVT-FNNKSFYLSCVYGHPTQSERHQLWQTLEHISDNRN 509
Query: 483 LPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTA 542
W ++GDFN+ILS+ EK G R W R FR V + D+ G F+W T
Sbjct: 510 AEWLLVGDFNEILSNAEKIGGPMREEWTFRNFRNMVSHCDIEDMRSKGDRFSWVGERHT- 568
Query: 543 RAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLWLTCKPVTAVNRNPHRFKFENA 602
V+ LDR +NS W FP A +E L T SDH P+ + + R F+F+N
Sbjct: 569 HTVKCCLDRVFINSAWTATFPYAEIEFLDFTGSDHKPVLVHFNE--SFPRRSKLFRFDNR 626
Query: 603 WLAEPDFKQQVQQRWKLYPEEG---ITQKLSYCAEDLTDWSRNNN-NFRRDISKVQKKIE 658
+ P FK+ VQ W+ IT+++S C + + +N N + I K+Q +
Sbjct: 627 LIDIPTFKRIVQTSWRTNRNSRSTPITERISSCRQAMARLKHASNLNSEQRIKKLQSSLN 686
Query: 659 KLRTHVTAANVSYFNSLKNKLDKLLVQDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRRK 718
+ + L+ L K ++++WKQ+++ W KEGD NT +FHA +R
Sbjct: 687 RAMESTRRVDRQLIPQLQESLAKAFSDEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYS 746
Query: 719 VNRIEHLENSNGTVCRKEDELQNIARNYFSHLFTKLSSTRADVISKV-----ATSISDDD 773
NR+ + + G + + E+ N A+++F+++F ST +S + +++++
Sbjct: 747 QNRVNTIMDDQGRMFTGDKEIGNHAQDFFTNIF----STNGIKVSPIDFADFKSTVTNTV 802
Query: 774 NCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVF 833
N LT F+ E A + DK PGPDG FY+N W++ G ++ ++ E
Sbjct: 803 NLDLTKEFSDTEIYDAICQIGDDKAPGPDGLTARFYKNCWDIVGYDVILEVKKFFETSFM 862
Query: 834 PPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVLANRLKNVLDKCISTSQSAF 893
P +N TNI +IPK TT+ D+RPIALCNV+YK+++K L NRLK+ L+ +S SQ+AF
Sbjct: 863 KPSINHTNICMIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAF 922
Query: 894 VPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSE 953
+PGR I DN ++A E++H +K + + S+ +A+K D+SKAYDR++W++L M F
Sbjct: 923 IPGRIINDNVMIAHEVMHSLKVRKRVSKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCN 982
Query: 954 KWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSPYLFILCAEGLSALIRDAER 1013
KWI WIM V++V Y+VL+NG G + P RGIRQGDPLSPYLFILC + LS LI
Sbjct: 983 KWIGWIMAAVKSVHYSVLINGSPHGYITPTRGIRQGDPLSPYLFILCGDILSHLINGRAS 1042
Query: 1014 RGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSE 1073
G + G RI APAI+HL FADD F +A+ + +K++ YE SGQ IN+QKS
Sbjct: 1043 SGDLRGVRIGNGAPAITHLQFADDSLFFCQANVRNCQALKDVFDVYEYYSGQKINVQKSM 1102
Query: 1074 MYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWS 1133
+ Q+R+ L + G GKYLGLP GR KK F+++ DR+ R ++WS
Sbjct: 1103 ITFGSRVYGSTQSRLKQILEIPNQGGGGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWS 1162
Query: 1134 SRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWL 1193
+R LS AG+EI++KSV ++P Y MS F LP + EIE +L FWW ++N RG+ W+
Sbjct: 1163 ARFLSPAGKEIMLKSVALAMPVYAMSCFKLPKGIVSEIESLLMNFWW-EKASNQRGIPWV 1221
Query: 1194 SWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSAS 1253
+W+RL K GG+GF+ L FN A++ KQAW+LI P+SL +++KA+YF A
Sbjct: 1222 AWKRLQYSKKEGGLGFRDLAKFNDALLAKQAWRLIQYPNSLFARVMKARYFKDVSILDAK 1281
Query: 1254 IGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQPWLKDPLCLQPVTEVQIMWDAL 1313
+ SY W SL LK G + IG G+ I + + D +P+ + + +
Sbjct: 1282 VRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRI-GLDNIVDSHPPRPL-NTEETYKEM 1339
Query: 1314 TVGHLF--KPNTKEWNENFIRYVFNAETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRS 1371
T+ +LF K + W+++ I + I + L +S + DK W + G Y+VRS
Sbjct: 1340 TINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRS 1399
Query: 1372 AYREIINRNDVLLQHRVPGKWNI-----IWNLKLPPKIKNFLWRVCRNCLPTRMRLISKG 1426
Y + + + P +I IWNL + PK+K+FLWR L T RL ++G
Sbjct: 1400 GYWLLTHDPSTNIPAINPPHGSIDLKTRIWNLPIMPKLKHFLWRALSQALATTERLTTRG 1459
Query: 1427 VQCPPTCAICNNHEEDGKHLFFACSKSVGCWQRLGFWPSIQQIWSHNAFCADI--IFSLL 1484
++ P+C C+ E H F C + W RL I+ N F +I I + +
Sbjct: 1460 MRIDPSCPRCHRENESINHALFTCPFATMAW-RLSDSSLIRNQLMSNDFEENISNILNFV 1518
Query: 1485 QQLDIA--HQQIFAVTLWSLWRHRNNKVWNNIVETTEEIGDRAVAFLNSW-KAAQETRIR 1541
Q ++ H+ + +W +W+ RNN V+N E+ + A A + W A Q +
Sbjct: 1519 QDTTMSDFHKLLPVWLIWRIWKARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKT 1578
Query: 1542 SSPANPHFDIS-KWSKPSVGRFKCNVDAAFSASLHRVGFGACIRDANGNHVISRTECFTP 1600
SP + +W P KCN DA F G IR+ G + +
Sbjct: 1579 PSPTRQIAENKIEWRNPPATYVKCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAH 1638
Query: 1601 LLDVEMGEAIGLLHAMR--WAKDLNLVNMDFETDSKVVVENIYKGDGVSDFMAIIHDCRH 1658
+ E LL A++ W + V M+ + + + N+ G +A +
Sbjct: 1639 TSNPLEAETKALLAALQQTWIRGYTQVFMEGDCQTLI---NLINGISFHSSLANHLEDIS 1695
Query: 1659 LLMTDLANSDVKFIRRQANSAAHNLAREALNHASFH 1694
A+ FIR++ N AH LA+ +++F+
Sbjct: 1696 FWANKFASIQFGFIRKKGNKLAHVLAKYGCTYSTFY 1731
>At2g17910 putative non-LTR retroelement reverse transcriptase
Length = 1344
Score = 719 bits (1855), Expect = 0.0
Identities = 416/1237 (33%), Positives = 653/1237 (52%), Gaps = 37/1237 (2%)
Query: 382 PEGIFLSETMAALNKIEELKYILSFDSCFTVDRIGRGGGLAFLWKNSANCTITNFSQNHI 441
P+ +FL ET + + + ++ L +D TV+ GR GGLA WK+ +N +
Sbjct: 7 PDILFLMETKNSQDFVYKVFCWLGYDFIHTVEPEGRSGGLAIFWKSHLEIEFLYADKNLM 66
Query: 442 DVEVDDLLIGKWRLTGFYGMPENGRRKESWAFLKNLARTSSLPWCVIGDFNDILSSEEKK 501
D++V W ++ YG+P R + W L ++ + WC+IGDFNDI S++EK
Sbjct: 67 DLQVSSRN-KVWFISCVYGLPVTHMRPKLWEHLNSIGLKRAEAWCLIGDFNDIRSNDEKL 125
Query: 502 GRSERAPWLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNM 561
G R+P + F +L+ + +L TG +FTW + + V+ KLDR N W ++
Sbjct: 126 GGPRRSPSSFQCFEHMLLNCSMHELGSTGNSFTWGGNRND-QWVQCKLDRCFGNPAWFSI 184
Query: 562 FPNAGVECLSTTSSDHYPLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRWKLYP 621
FPNA L SDH P+ + + R +F+++ +P + + + W
Sbjct: 185 FPNAHQWFLEKFGSDHRPVLVKFTNDNELFRG--QFRYDKRLDDDPYCIEVIHRSWNSAM 242
Query: 622 EEGITQK---LSYCAEDLTDWSRNNNNFRRDISKVQKKIEKLRTHVTAANVSYF------ 672
+G L C ++ W +++ + Q +I++LR + A
Sbjct: 243 SQGTHSSFFSLIECRRAISVWKHSSD------TNAQSRIKRLRKDLDAEKSIQIPCWPRI 296
Query: 673 NSLKNKLDKLLVQDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTV 732
+K++L ++LFW+Q+++ W GD NT FFHA S R N + L + N
Sbjct: 297 EYIKDQLSLAYGDEELFWRQKSRQKWLAGGDKNTGFFHATVHSERLKNELSFLLDENDQE 356
Query: 733 CRKEDELQNIARNYFSHLFTKLSS-TRADVISKVATSISDDDNCFLTAAFTLEEFKTAAF 791
+ + IA ++F +LFT T + + + ++ + N L T E A F
Sbjct: 357 FTRNSDKGKIASSFFENLFTSTYILTHNNHLEGLQAKVTSEMNHNLIQEVTELEVYNAVF 416
Query: 792 SMQADKCPGPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQ 851
S+ + PGPDGF F+Q W++ +I + E GV P N T+I LIPK +
Sbjct: 417 SINKESAPGPDGFTALFFQQHWDLVKHQILTEIFGFFETGVLPQDWNHTHICLIPKITSP 476
Query: 852 TTMKDWRPIALCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIH 911
M D RPI+LC+V+YK+++K+L RLK L +ST+QSAFVP R I DN LVA E+IH
Sbjct: 477 QRMSDLRPISLCSVLYKIISKILTQRLKKHLPAIVSTTQSAFVPQRLISDNILVAHEMIH 536
Query: 912 YMKAKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVL 971
++ + S+ +A K D+SKAYDR++W +L +M + F+ KWI WIM CV +V Y+VL
Sbjct: 537 SLRTNDRISKEHMAFKTDMSKAYDRVEWPFLETMMTALGFNNKWISWIMNCVTSVSYSVL 596
Query: 972 VNGVQVGPLIPGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISH 1031
+NG G +IP RGIRQGDPLSP LF+LC E L ++ AE+ G ITG + +++H
Sbjct: 597 INGQPYGHIIPTRGIRQGDPLSPALFVLCTEALIHILNKAEQAGKITGIQFQDKKVSVNH 656
Query: 1032 LLFADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATT 1091
LLFADD L +A++QE + L+ Y SGQ INL KS + +N + ++ I +
Sbjct: 657 LLFADDTLLMCKATKQECEELMQCLSQYGQLSGQMINLNKSAITFGKNVDIQIKDWIKSR 716
Query: 1092 LGVKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQ 1151
G+ GTGKYLGLP + SK+ F F+K+++ +R+ W ++ LSQ G+E+L+KS+
Sbjct: 717 SGISLEGGTGKYLGLPECLSGSKRDLFGFIKEKLQSRLTGWYAKTLSQGGKEVLLKSIAL 776
Query: 1152 SIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKS 1211
++P YVMS F LP ++ ++ FWW ++ R +HWLSW+RL++PK GG GFK
Sbjct: 777 ALPVYVMSCFKLPKNLCQKLTTVMMDFWW-NSMQQKRKIHWLSWQRLTLPKDQGGFGFKD 835
Query: 1212 LRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDY 1271
L+ FN A++ KQAW+++ SL +++ +++YF +SD+ SA+ G PSY WRS+ R+
Sbjct: 836 LQCFNQALLAKQAWRVLQEKGSLFSRVFQSRYFSNSDFLSATRGSRPSYAWRSILFGREL 895
Query: 1272 LKHGLKWSIGTGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFI 1331
L GL+ IG G+ VW WL D +P+ + + L V L P ++ WN N +
Sbjct: 896 LMQGLRTVIGNGQKTFVWTDKWLHDGSNRRPLNRRRFINVDLKVSQLIDPTSRNWNLNML 955
Query: 1332 RYVFNAETSNQIL-QTPLLQSVQVDKATWRFEKNGLYSVRSAY----REIINR--NDVLL 1384
R +F + IL Q PL + D W NGLYSV++ Y +++ +R + +
Sbjct: 956 RDLFPWKDVEIILKQRPLF--FKEDSFCWLHSHNGLYSVKTGYEFLSKQVHHRLYQEAKV 1013
Query: 1385 QHRVPGKWNIIWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGK 1444
+ V ++ IWNL PKI+ FLW+ +P RL ++G++ C +C+ E
Sbjct: 1014 KPSVNSLFDKIWNLHTAPKIRIFLWKALHGAIPVEDRLRTRGIRSDDGCLMCDTENETIN 1073
Query: 1445 HLFFACSKSVGCWQRLGFWPSIQQIWSHNAFC-ADIIFSLLQQLDIAHQQIFAV--TLWS 1501
H+ F C + W + S +S++ + + L QQ D+ H F LW
Sbjct: 1074 HILFECPLARQVW-AITHLSSAGSEFSNSVYTNMSRLIDLTQQNDLPHHLRFVSPWILWF 1132
Query: 1502 LWRHRNNKVWNNIVETTEEIGDRAVAFLNSWKAAQETRIRSSPANPHFDISKWSKPSVGR 1561
LW++RN ++ T + D+A + W +AQ T +++ H I+KW P G
Sbjct: 1133 LWKNRNALLFEGKGSITTTLVDKAYEAYHEWFSAQ-THMQND--EKHLKITKWCPPLPGE 1189
Query: 1562 FKCNVDAAFSASLHRVGFGACIRDANGNHVISRTECF 1598
KCN+ A+S H G +RD+ G ++ F
Sbjct: 1190 LKCNIGFAWSKQHHFSGASWVVRDSQGKVLLHSRRSF 1226
>At2g31520 putative non-LTR retroelement reverse transcriptase
Length = 1524
Score = 715 bits (1846), Expect = 0.0
Identities = 438/1334 (32%), Positives = 676/1334 (49%), Gaps = 47/1334 (3%)
Query: 389 ETMAALNKIEELKYILSFDSCFTVDRIGRGGGLAFLWKNSANCTITNFSQNHIDVEVDDL 448
ET+ +K+ +L Y L F + T GR GGLA +WKN+ + ++ + + ID V
Sbjct: 191 ETLNQCDKVCKLAYDLGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHVT-F 249
Query: 449 LIGKWRLTGFYGMPENGRRKESWAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAP 508
+ L+ YG P R + W L++++ + W ++GDFN+ILS+ EK G R
Sbjct: 250 NNKSFYLSCVYGHPTQSERHQLWQTLEHISDNRNAEWLLVGDFNEILSNAEKIGGPMREE 309
Query: 509 WLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVE 568
W R FR V + D+ G F+W T V+ LDR +NS W FP A E
Sbjct: 310 WTFRNFRNMVSHCDIEDMRSKGDRFSWVGERHT-HTVKCCLDRVFINSAWTATFPYAETE 368
Query: 569 CLSTTSSDHYPLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRWKLYPEEG---I 625
L T SDH P+ + + R F+F+N + P FK+ VQ W+ I
Sbjct: 369 FLDFTGSDHKPVLVHFNE--SFPRRSKLFRFDNRLIDIPTFKRIVQTSWRTNRNSRSTPI 426
Query: 626 TQKLSYCAEDLTDWSRNNN-NFRRDISKVQKKIEKLRTHVTAANVSYFNSLKNKLDKLLV 684
T+++S C + + +N N + I K+Q + + + L+ L K
Sbjct: 427 TERISSCRQAMARLKHASNLNSEQRIKKLQSSLNRAMESTRRVDRQLIPQLQESLAKAFS 486
Query: 685 QDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIAR 744
++++WKQ+++ W KEGD NT +FHA +R NR+ + + G + + E+ N A+
Sbjct: 487 DEEIYWKQKSRNQWMKEGDQNTGYFHACTKTRYSQNRVNTIMDDQGRMFTGDKEIGNHAQ 546
Query: 745 NYFSHLFTKLSSTRADVISKV-----ATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCP 799
++F+++F ST +S + +++++ N LT F+ E A + DK P
Sbjct: 547 DFFTNIF----STNGIKVSPIDFADFKSTVTNTVNLDLTKEFSDTEIYDAICQIGDDKAP 602
Query: 800 GPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRP 859
GPDG FY+N W++ G ++ ++ E P +N TNI +IPK TT+ D+RP
Sbjct: 603 GPDGLTARFYKNCWDIVGYDVILEVKKFFETSFMKPSINHTNICMIPKITNPTTLSDYRP 662
Query: 860 IALCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKG 919
IALCNV+YK+++K L NRLK+ L+ +S SQ+AF+PGR I DN ++A E++H +K + +
Sbjct: 663 IALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFIPGRIINDNVMIAHEVMHSLKVRKRV 722
Query: 920 SQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGP 979
S+ +A+K D+SKAYDR++W++L M F KWI WIM V++V Y+VL+NG G
Sbjct: 723 SKTYMAVKTDVSKAYDRVEWDFLETTMRLFGFCNKWIGWIMAAVKSVHYSVLINGSPHGY 782
Query: 980 LIPGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCF 1039
+ P RGIRQGDPLSPYLFILC + LS LI G + G RI APAI+HL FADD
Sbjct: 783 ITPTRGIRQGDPLSPYLFILCGDILSHLINGRASSGDLRGVRIGNGAPAITHLQFADDSL 842
Query: 1040 LFFRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLG 1099
F +A+ + +K++ YE SGQ IN+QKS + Q+++ L + G
Sbjct: 843 FFCQANVRNCQALKDVFDVYEYYSGQKINVQKSMITFGSRVYGSTQSKLKQILEIPNQGG 902
Query: 1100 TGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMS 1159
GKYLGLP GR KK F+++ DR+ R ++WS+R LS AG+EI++KSV ++P Y MS
Sbjct: 903 GGKYLGLPEQFGRKKKEMFEYIIDRVKKRTSTWSARFLSPAGKEIMLKSVALAMPVYAMS 962
Query: 1160 IFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAM 1219
F LP + EIE +L FWW ++N RG+ W++W+RL K GG+GF+ L FN A+
Sbjct: 963 CFKLPKGIVSEIESLLMNFWW-EKASNQRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDAL 1021
Query: 1220 IGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWS 1279
+ KQAW+LI P+SL +++KA+YF A + SY W SL LK G +
Sbjct: 1022 LAKQAWRLIQYPNSLFARVMKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHL 1081
Query: 1280 IGTGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLF--KPNTKEWNENFIRYVFNA 1337
IG G+ I + + D +P+ + + +T+ +LF K + W+++ I +
Sbjct: 1082 IGDGQNIRI-GLDNIVDSHPPRPL-NTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQ 1139
Query: 1338 ETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREIINRNDVLLQHRVPGKWNI--- 1394
I + L +S + DK W + G Y+VRS Y + + + P +I
Sbjct: 1140 SDHGFIHRIYLAKSKKPDKIIWNYNTTGEYTVRSGYWLLTHDPSTNIPAINPPHGSIDLK 1199
Query: 1395 --IWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSK 1452
IWNL + PK+K+FLWR L T RL ++G++ P C C+ E H F C
Sbjct: 1200 TRIWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPICPRCHRENESINHALFTCPF 1259
Query: 1453 SVGCWQRLGFWPSIQQIWSHNAFCADI------IFSLLQQLDIA--HQQIFAVTLWSLWR 1504
+ W W S + + D I + +Q ++ H+ + +W +W+
Sbjct: 1260 ATMAW-----WLSDSSLIRNQLMSNDFEENISNILNFVQDTTMSDFHKLLPVWLIWRIWK 1314
Query: 1505 HRNNKVWNNIVETTEEIGDRAVAFLNSW-KAAQETRIRSSPANPHFDIS-KWSKPSVGRF 1562
RNN V+N E+ + A A + W A Q + SP + +W P
Sbjct: 1315 ARNNVVFNKFRESPSKTVLSAKAETHDWLNATQSHKKTPSPTRQIAENKIEWRNPPATYV 1374
Query: 1563 KCNVDAAFSASLHRVGFGACIRDANGNHVISRTECFTPLLDVEMGEAIGLLHAMR--WAK 1620
KCN DA F G IR+ G + + + E LL A++ W +
Sbjct: 1375 KCNFDAGFDVQKLEATGGWIIRNHYGTPISWGSMKLAHTSNPLEAETKALLAALQQTWIR 1434
Query: 1621 DLNLVNMDFETDSKVVVENIYKGDGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAA 1680
V M+ + + + N+ G +A + A+ FIRR+ N A
Sbjct: 1435 GYTQVFMEGDCQTLI---NLINGISFHSSLANHLEDISFWANKFASIQFGFIRRKGNKLA 1491
Query: 1681 HNLAREALNHASFH 1694
H LA+ +++F+
Sbjct: 1492 HVLAKYGCTYSTFY 1505
>At4g09710 RNA-directed DNA polymerase -like protein
Length = 1274
Score = 692 bits (1785), Expect = 0.0
Identities = 413/1294 (31%), Positives = 666/1294 (50%), Gaps = 66/1294 (5%)
Query: 410 FTVDRIGRGGGLAFLWKNSANCTITNFSQNHIDVEVDDLLIGKWRLTGFYGMPENGRRKE 469
FT+ G GGLA WK + I + N ID R
Sbjct: 23 FTIPPEGLSGGLALYWKENVEVEILEAAPNFID-----------------------NRSV 59
Query: 470 SWAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMT 529
W + +L S W + GDFNDIL + EK+G R FR V GL+D++ T
Sbjct: 60 FWDKISSLGAQRSSAWLLTGDFNDILDNSEKQGGPLRWEGFFLAFRSFVSQNGLWDINHT 119
Query: 530 GYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLWLTCKPVTA 589
G + +W + + ++ +LDRAL N W +FP + E L SDH PL VT
Sbjct: 120 GNSLSW-RGTRYSHFIKSRLDRALGNCSWSELFPMSKCEYLRFEGSDHRPL------VTY 172
Query: 590 VNRNPHR----FKFENAWLAEPDFKQQVQQRWKLYPEEGITQKLSYCAEDLTDWSRN-NN 644
P + F+F+ + + + V++ W+L ++ + K+S C + + W++ N+
Sbjct: 173 FGAPPLKRSKPFRFDRRLREKEEIRALVKEVWELARQDSVLYKISRCRQSIIKWTKEQNS 232
Query: 645 NFRRDISKVQKKIEKLRTHVTAANVSYFNSLKNKLDKLLVQDDLFWKQRAKTFWYKEGDL 704
N + I K Q+ +E + + S S+ +L+ Q++LFWKQ ++ W GD
Sbjct: 233 NSAKAIKKAQQALESALS-ADIPDPSLIGSITQELEAAYRQEELFWKQWSRVQWLNSGDR 291
Query: 705 NTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFTKLSSTRADVISK 764
N +FHA +RR +N + +E+ +G +E+++ + +YF ++FT +++ V+ +
Sbjct: 292 NKGYFHATTRTRRMLNNLSVIEDGSGQEFHEEEQIASTISSYFQNIFTTSNNSDLQVVQE 351
Query: 765 VATSI-SDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWNMCGSEIHKA 823
+ I S N L +L E K A FS+ ADK PGPDGF+ F+ +W++ +++ +
Sbjct: 352 ALSPIISSHCNEELIKISSLLEIKEALFSISADKAPGPDGFSASFFHAYWDIIEADVSRD 411
Query: 824 GCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVLANRLKNVLD 883
+ + P LN T++ LIPK A + D+RPIALCNV YK+VAK+L RL+ L
Sbjct: 412 IRSFFVDSCLSPRLNETHVTLIPKISAPRKVSDYRPIALCNVQYKIVAKILTRRLQPWLS 471
Query: 884 KCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAYDRLDWEYLR 943
+ IS QSAFVPGR+I DN L+ E++H+++ +A+K D+SKAYDR+ W +L+
Sbjct: 472 ELISLHQSAFVPGRAIADNVLITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIKWNFLQ 531
Query: 944 DIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSPYLFILCAEG 1003
++++++ F +KWIRW+M CV TV Y+ L+NG G ++P RG+RQGDPLSPYLFILC E
Sbjct: 532 EVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFILCTEV 591
Query: 1004 LSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMKNILTTYEAAS 1063
LS L R A+ +GV+ G R+ +P ++HLLFADD F + + + NIL YE AS
Sbjct: 592 LSGLCRKAQEKGVMVGIRVARGSPQVNHLLFADDTMFFCKTNPTCCGALSNILKKYELAS 651
Query: 1064 GQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSKKATFKFVKD 1123
GQ+INL KS + S TP + + R+ +L + G GKYLGLP GR K+ F + D
Sbjct: 652 GQSINLAKSAITFSSKTPQDIKRRVKLSLRIDNEGGIGKYLGLPEHFGRRKRDIFSSIVD 711
Query: 1124 RIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHN 1183
RI R +SWS R LS AG++IL+K+VL S+PSY M F LP++ +I+ +L FWW +
Sbjct: 712 RIRQRSHSWSIRFLSSAGKQILLKAVLSSMPSYAMMCFKLPASLCKQIQSVLTRFWW-DS 770
Query: 1184 SANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKY 1243
+ R M W+SW++L++P GG+GF+ + A K +W+++ P SL++++L KY
Sbjct: 771 KPDKRKMAWVSWDKLTLPINEGGLGFREIEA-------KLSWRILKEPHSLLSRVLLGKY 823
Query: 1244 FPHSDYFSASIGHN-PSYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQPWLKDPLCLQP 1302
S + S + S+ WR + + RD L+ GL WSIG G++I+VW + WL P
Sbjct: 824 CNTSSFMDCSASPSFASHGWRGILAGRDLLRKGLGWSIGQGDSINVWTEAWLSPSSPQTP 883
Query: 1303 VTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAETSNQILQTPLLQSVQVDKATWRFE 1362
+ L+V L + K WN IR + +QI + + D W
Sbjct: 884 IGPPTETNKDLSVHDLICHDVKSWNVEAIRKHL-PQYEDQIRKITINALPLQDSLVWLPV 942
Query: 1363 KNGLYSVRSAYREIINRNDVLLQHRVPGKW-NIIWNLKLPPKIKNFLWRVCRNCLPTRMR 1421
K+G Y+ ++ Y + + + ++ W IW + PK+K+FLW+ + LP
Sbjct: 943 KSGEYTTKTGY--ALAKLNSFPASQLDFNWQKNIWKIHTSPKVKHFLWKAMKGALPVGEA 1000
Query: 1422 LISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCWQ--RLGFWPSIQQIWSHNAFCADI 1479
L + ++ TC C E HL C + W+ + F PS +H++ +
Sbjct: 1001 LSRRNIEAEVTCKRC-GQTESSLHLMLLCPYAKKVWELAPVLFNPSEA---THSSVALLL 1056
Query: 1480 I----FSLLQQLDIAHQQIFAVTLWSLWRHRNNKVWNNIVETTEEIGDRAVAFLNSWKAA 1535
+ L + ++ LW LW+ RN +++N + E + +A+ +W A
Sbjct: 1057 VDAKRMVALPPTGLGSAPLYPWLLWHLWKARNRLIFDNHSCSEEGLVLKAILDARAWMEA 1116
Query: 1536 QETRIRSSPANPHFDISKWSKPSVGRFKCNVDAAFSASLHRVGFGACIRDANGNHVISRT 1595
Q SP + + P++ C VDAA++ S + G G ++D +
Sbjct: 1117 QLLIHHPSPISDY----PSPTPNLKVTSCFVDAAWTTSGY-CGMGWFLQDPYKVKIKENQ 1171
Query: 1596 ECFTPLLDVEMGEAIGLLHAMRWAKDLNLVNMDFETDSKVVVENIYKGDGVSDFMAIIHD 1655
+ + M E + + A+ A + ++ +D K ++ + G + + ++HD
Sbjct: 1172 SSSSFVGSALMAETLAVHLALVDALSTGVRQLNVFSDCKELISLLNSGKSIVELRGLLHD 1231
Query: 1656 CRHLLMTDLANSDVKFIRRQANSAAHNLAREALN 1689
R L ++ + FI R +N A +LA+ AL+
Sbjct: 1232 IRELSVS-FTHLCFFFIPRLSNVVADSLAKSALS 1264
>At1g24640 hypothetical protein
Length = 1270
Score = 677 bits (1748), Expect = 0.0
Identities = 395/1179 (33%), Positives = 632/1179 (53%), Gaps = 61/1179 (5%)
Query: 391 MAALNKIEELKYILSFDSCFTVDRIGRGGGLAFLWKNSANCTITNFSQNHIDVEVDDLLI 450
M + + + +++ L +D +TV+ +G+ GGLA LWK+S + +N +D +V +
Sbjct: 1 MHSRDDLVDIQSWLEYDQVYTVEPVGKCGGLALLWKSSVQVDLKFVDKNLMDAQVQFGAV 60
Query: 451 GKWRLTGFYGMPENGRRKESWAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAPWL 510
+ ++ YG P+ +R ++W + + WC+ GDFNDIL + EK G R+
Sbjct: 61 N-FCVSCVYGDPDRSKRSQAWERISRIGVGRRDKWCMFGDFNDILHNGEKNGGPRRSDLD 119
Query: 511 IRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECL 570
+ F + + L ++ G FTW G ++ +LDRA N +W FP + L
Sbjct: 120 CKAFNEMIKGCDLVEMPAHGNGFTWAGRRGD-HWIQCRLDRAFGNKEWFCFFPVSNQTFL 178
Query: 571 STTSSDHYPLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRW---KLYPEEGITQ 627
SDH P+ + K +++ + +F+F+ +L + D K+ + + W K +
Sbjct: 179 DFRGSDHRPVLI--KLMSSQDSYRGQFRFDKRFLFKEDVKEAIIRTWSRGKHGTNISVAD 236
Query: 628 KLSYCAEDLTDWSRNNN-NFRRDISKVQKKIEKLRTHVTAANVSYFNSLKNKLDKLLVQD 686
+L C + L+ W + NN N I++++ +EK ++ V + LK L K ++
Sbjct: 237 RLRACRKSLSSWKKQNNLNSLDKINQLEAALEKEQSLVWPI-FQRVSVLKKDLAKAYREE 295
Query: 687 DLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNY 746
+ +WKQ+++ W + G+ N+K+FHAA R+ RIE L++ NG + E +A Y
Sbjct: 296 EAYWKQKSRQKWLRSGNRNSKYFHAAVKQNRQRKRIEKLKDVNGNMQTSEAAKGEVAAAY 355
Query: 747 FSHLFTKLS-STRADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFN 805
F +LF + S D S + +S+ N L + +E K A FS++ PGPDG +
Sbjct: 356 FGNLFKSSNPSGFTDWFSGLVPRVSEVMNESLVGEVSAQEIKEAVFSIKPASAPGPDGMS 415
Query: 806 PGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNV 865
F+Q++W+ G+++ ++ +G+ P N T++ LIPK T M D RPI+LC+V
Sbjct: 416 ALFFQHYWSTVGNQVTSEVKKFFADGIMPAEWNYTHLCLIPKTQHPTEMVDLRPISLCSV 475
Query: 866 VYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVA 925
+YK+++K++A RL+ L + +S +QSAFV R I DN LVA EL+H +K + S +A
Sbjct: 476 LYKIISKIMAKRLQPWLPEIVSDTQSAFVSERLITDNILVAHELVHSLKVHPRISSEFMA 535
Query: 926 LKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRG 985
+K D+SKAYDR++W YLR +++ + F KW+ WIM+CV +V Y+VL+N G +I RG
Sbjct: 536 VKSDMSKAYDRVEWSYLRSLLLSLGFHLKWVNWIMVCVSSVTYSVLINDCPFGLIILQRG 595
Query: 986 IRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRAS 1045
+RQGDPLSP+LF+LC EGL+ L+ A+ G + G + + P + HLLFADD +AS
Sbjct: 596 LRQGDPLSPFLFVLCTEGLTHLLNKAQWEGALEGIQFSENGPMVHHLLFADDSLFLCKAS 655
Query: 1046 EQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLG 1105
+++ V++ IL Y A+GQ INL KS + + + I T LG+ G G YLG
Sbjct: 656 REQSLVLQKILKVYGNATGQTINLNKSSITFGEKVDEQLKGTIRTCLGIFTEGGAGTYLG 715
Query: 1106 LPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPS 1165
LP SK ++KDR+ +++ W +RCLSQ G+E+L+KSV ++P + MS F LP
Sbjct: 716 LPECFSGSKVDMLHYLKDRLKEKLDVWFTRCLSQGGKEVLLKSVALAMPVFAMSCFKLPI 775
Query: 1166 TFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAW 1225
T +E + +FWW + +SR +HW SWERL +PK GG+GF+ +++FN A++ KQAW
Sbjct: 776 TTCENLESAMASFWWD-SCDHSRKIHWQSWERLCLPKDSGGLGFRDIQSFNQALLAKQAW 834
Query: 1226 KLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGET 1285
+L+ PD L+++LLK++YF +D+ A++ PS+ WRS+ R+ L GL+ +G G +
Sbjct: 835 RLLHFPDCLLSRLLKSRYFDATDFLDAALSQRPSFGWRSILFGRELLSKGLQKRVGDGAS 894
Query: 1286 ISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAETSNQILQ 1345
+ VW PW+ D P + I L V L P T W+E + +F E IL+
Sbjct: 895 LFVWIDPWIDDNGFRAPWRKNLIYDVTLKVKALLNPRTGFWDEEVLHDLFLPE---DILR 951
Query: 1346 TPLLQSV--QVDKATWRFEKNGLYSVRSAY------REIINRNDVLLQHRVPGKWNIIWN 1397
++ V Q D W+ K+G +SV+SAY + R++V +Q G +WN
Sbjct: 952 IKAIKPVISQADFFVWKLNKSGDFSVKSAYWLAYQTKSQNLRSEVSMQPSTLGLKTQVWN 1011
Query: 1398 LKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCW 1457
L+ PKIK FLW+VC E H F C S W
Sbjct: 1012 LQTDPKIKIFLWKVCGEL------------------------GESTNHTLFLCPLSRQIW 1047
Query: 1458 QRLGFWPSIQQIWSHNAFCADIIFSLLQQLD-----IAHQQIFAVTLWSLWRHRNNKVWN 1512
L +P +S+ + ++I LL+ D I ++IF LW +W++RN+ ++
Sbjct: 1048 A-LSDYPFPPDGFSNGSIYSNINH-LLENKDNKEWPINLRKIFPWILWRIWKNRNSFIFE 1105
Query: 1513 NI----VETTEEIGDRAVAFLNSWKAAQETRIRSSPANP 1547
I +T +I D V W AQ S NP
Sbjct: 1106 GISYPATDTVIKIRDDVV----EWFEAQCLDGEGSALNP 1140
>At1g47910 reverse transcriptase, putative
Length = 1142
Score = 668 bits (1723), Expect = 0.0
Identities = 394/1157 (34%), Positives = 600/1157 (51%), Gaps = 45/1157 (3%)
Query: 574 SSDHYPLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRWKL---YPEEGITQKLS 630
+SDH P+ T + R F+F+ W+ + + + Q W L + E +KL+
Sbjct: 3 ASDHSPVIATI--ADKIPRGKQNFRFDKRWIGKDGLLEAISQGWNLDSGFREGQFVEKLT 60
Query: 631 YCAEDLTDWSRNNNNFRR--------DISKVQKKIEKLRTHVTAANVSYFNSLKNKLDKL 682
C ++ W ++ F R ++ Q+ ++ R +T L +L +
Sbjct: 61 NCRRAISKWRKSLIPFGRQTIEDLKAELDVAQRDDDRSREEIT--------ELTLRLKEA 112
Query: 683 LVQDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNI 742
++ +W Q++++ W K GD N+KFFHA RR NRI L + NG ++D++QNI
Sbjct: 113 YRDEEQYWYQKSRSLWMKLGDNNSKFFHALTKQRRARNRITGLHDENGIWSIEDDDIQNI 172
Query: 743 ARNYFSHLFTKLSSTRAD-VISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGP 801
A +YF +LFT + D + +V I+D N LTA T E + A F + +K PGP
Sbjct: 173 AVSYFQNLFTTANPQVFDEALGEVQVLITDRINDLLTADATECEVRAALFMIHPEKAPGP 232
Query: 802 DGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIA 861
DG F+Q W + S++ +L+ GVF LN+TNI LIPK + T M + RPI+
Sbjct: 233 DGMTALFFQKSWAIIKSDLLSLVNSFLQEGVFDKRLNTTNICLIPKTERPTRMTELRPIS 292
Query: 862 LCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQ 921
LCNV YK+++K+L RLK VL IS +QSAFV GR I DN L+A E+ H ++ +
Sbjct: 293 LCNVGYKVISKILCQRLKTVLPNLISETQSAFVDGRLISDNILIAQEMFHGLRTNSSCKD 352
Query: 922 GDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLI 981
+A+K D+SKAYD+++W ++ ++ +M F EKWI WIM C+ TV Y VL+NG G +I
Sbjct: 353 KFMAIKTDMSKAYDQVEWNFIEALLRKMGFCEKWISWIMWCITTVQYKVLINGQPKGLII 412
Query: 982 PGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLF 1041
P RG+RQGDPLSPYLFILC E L A IR AER+ +ITG ++ T +PA+SHLLFADD F
Sbjct: 413 PERGLRQGDPLSPYLFILCTEVLIANIRKAERQNLITGIKVATPSPAVSHLLFADDSLFF 472
Query: 1042 FRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTG 1101
+A++++ ++ IL YE+ SGQ IN KS + + I LG+ + G G
Sbjct: 473 CKANKEQCGIILEILKQYESVSGQQINFSKSSIQFGHKVEDSIKADIKLILGIHNLGGMG 532
Query: 1102 KYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIF 1161
YLGLP +G SK F FV+DR+ +RIN WS++ LS+ G+E++IKSV ++P YVMS F
Sbjct: 533 SYLGLPESLGGSKTKVFSFVRDRLQSRINGWSAKFLSKGGKEVMIKSVAATLPRYVMSCF 592
Query: 1162 LLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIG 1221
LP ++ + FWW N +SRGMHW++W++L K+ GG+GF+++ FN A++
Sbjct: 593 RLPKAITSKLTSAVAKFWWSSN-GDSRGMHWMAWDKLCSSKSDGGLGFRNVDDFNSALLA 651
Query: 1222 KQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIG 1281
KQ W+LI+ PDSL K+ K +YF S+ + ++PSY WRS+ S R + GL +G
Sbjct: 652 KQLWRLITAPDSLFAKVFKGRYFRKSNPLDSIKSYSPSYGWRSMISARSLVYKGLIKRVG 711
Query: 1282 TGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAETSN 1341
+G +ISVWN PW+ I+ +L V L + WN + ++ +F+ E
Sbjct: 712 SGASISVWNDPWIPAQFPRPAKYGGSIVDPSLKVKSLIDSRSNFWNIDLLKELFDPEDVP 771
Query: 1342 QILQTPLLQSVQVDKATWRFEKNGLYSVRSAY---REIINRNDVLLQHRVPGKWNIIWNL 1398
I P+ D W F K G Y+V+S Y R +N L+ + IW +
Sbjct: 772 LISALPIGNPNMEDTLGWHFTKAGNYTVKSGYHTARLDLNEGTTLIGPDLTTLKAYIWKV 831
Query: 1399 KLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCWQ 1458
+ PPK+++FLW++ C+P L +G+ C C C EE H F C + W
Sbjct: 832 QCPPKLRHFLWQILSGCVPVSENLRKRGILCDKGCVSCGASEESINHTLFQCHPARQIW- 890
Query: 1459 RLGFWPSIQQIWSHNAFCADIIFSLLQQLDIAHQQIFAVTLWSLWRHRNNKVWNNIVETT 1518
L P+ I+ N+ ++ + + +W +W+ RN KV+ N+ +
Sbjct: 891 ALSQIPTAPGIFPSNSIFTNLDHLFWRIPSGVDSAPYPWIIWYIWKARNEKVFENVDKDP 950
Query: 1519 EEIGDRAVAFLNSWKAAQ----ETRIRSSPANPHFDISKWSKPSV-GRFKCNVDAAFSAS 1573
EI AV SW+ AQ R S + + S+ + F+C +D ++ AS
Sbjct: 951 MEILLLAVKEAQSWQEAQVELHSERHGSLSIDSRIRVRDVSQDTTFSGFRCFIDGSWKAS 1010
Query: 1574 LHRVGFG-ACIRDANGNHVISRTECFTPLLDVEMGEAIGLLHAMRWAKDLNLVNMDFETD 1632
G G C+ + + L + E LL AM+ + N+ F TD
Sbjct: 1011 DQFSGTGWFCLSSLGESPTMGAANVRRSLSPLHT-EMEALLWAMKCMIGADNQNVAFFTD 1069
Query: 1633 SKVVVENIYKGDGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAAHNLAREALNHAS 1692
+V+ + F + + + + N + I R AN A LAR+
Sbjct: 1070 CSDLVKMVSSPTEWPAFSVYLEELQS-DREEFTNFSLSLISRSANVKADKLARKI----- 1123
Query: 1693 FHYHLNIPHCIHTLINN 1709
+PH + T +NN
Sbjct: 1124 ----RTVPHHV-TYVNN 1135
>At2g05200 putative non-LTR retroelement reverse transcriptase
Length = 1229
Score = 653 bits (1685), Expect = 0.0
Identities = 392/1200 (32%), Positives = 613/1200 (50%), Gaps = 32/1200 (2%)
Query: 492 NDILSSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTARAVEEKLDR 551
N+IL + EK+G R FR + GL+DL +G F+W + + V ++LDR
Sbjct: 36 NEILDNSEKRGGPPRDQGSFIDFRSFISKNGLWDLKYSGNPFSW-RGMRYDWFVRQRLDR 94
Query: 552 ALVNSDWCNMFPNAGVECLSTTSSDHYPLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQ 611
A+ N+ W FP+ E L SDH PL + R +F+F+N
Sbjct: 95 AMSNNSWLESFPSGRSEYLRFEGSDHRPLVVFVDEARVKRRG--QFRFDNRLRDNDVVNA 152
Query: 612 QVQQRWKLYPEEGITQKLSYCAEDLTDWSRNNN-NFRRDISKVQKKIEKLRTHVTAANVS 670
+Q+ W + + K++ C ++ +W+R N N I K QK +E+ T N +
Sbjct: 153 LIQETWTNAGDASVLTKMNQCRREIINWTRLQNLNSAELIEKTQKALEEALT-ADPPNPT 211
Query: 671 YFNSLKNKLDKLLVQDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNG 730
+L L+ ++ FWKQR++ W GD NT +FHA +RR NR+ +E+ NG
Sbjct: 212 TIGALTATLEHAYKLEEQFWKQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMEDING 271
Query: 731 TVCRKEDELQNIARNYFSHLFTKLSSTRADVISK-VATSISDDDNCFLTAAFTLEEFKTA 789
+E ++ I YF +FT S V+ + + +S DN FLT EE K A
Sbjct: 272 VAQHEEHQISQIISGYFQQIFTSESDGDFSVVDEAIEPMVSQGDNDFLTRIPNDEEVKDA 331
Query: 790 AFSMQADKCPGPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGD 849
FS+ A K PGPDGF GFY ++W++ +++ + + + FP +N T+I LIPK
Sbjct: 332 VFSINASKAPGPDGFTAGFYHSYWHIISTDVGREIRLFFTSKNFPRRMNETHIRLIPKDL 391
Query: 850 AQTTMKDWRPIALCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIEL 909
+ D+RPIALCN+ YK+VAK++ R++ +L K IS +QSAFVPGR I DN L+ E+
Sbjct: 392 GPRKVADYRPIALCNIFYKIVAKIMTKRMQLILPKLISENQSAFVPGRVISDNVLITHEV 451
Query: 910 IHYMKAKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYT 969
+H+++ + +A+K D+SKAYDR++W++L+ ++ + F WI W++ CV +V Y+
Sbjct: 452 LHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIWIDWVLECVTSVSYS 511
Query: 970 VLVNGVQVGPLIPGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAI 1029
L+NG G ++P RG+RQGDPLSP LFILC E LS L A+R + G R+ + P +
Sbjct: 512 FLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLRQLPGVRVSINGPRV 571
Query: 1030 SHLLFADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIA 1089
+HLLFADD F ++ + + + IL+ Y ASGQ+IN KS + S TP + ++
Sbjct: 572 NHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVTFSSKTPRSVKGQVK 631
Query: 1090 TTLGVKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSV 1149
L +++ GTGKYLGLP GR K+ F + D+I + +SW+SR LSQAG+++++K+V
Sbjct: 632 RILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASRFLSQAGKQVMLKAV 691
Query: 1150 LQSIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGF 1209
L S+P Y MS F LPS +I+ +L FWW + R W++W +L+ PK GG+GF
Sbjct: 692 LASMPLYSMSCFKLPSALCRKIQSLLTRFWW-DTKPDVRKTSWVAWSKLTNPKNAGGLGF 750
Query: 1210 KSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVR 1269
+ + N +++ K W+L+++P+SL++++L KY S + + PS+ WRS+ + R
Sbjct: 751 RDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPSQPSHGWRSIIAGR 810
Query: 1270 DYLKHGLKWSIGTGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNEN 1329
+ LK GL W I GE +S+WN PWL L P+ L V L NT +W+ N
Sbjct: 811 EILKEGLGWLITNGEKVSIWNDPWLSISKPLVPIGPALREHQDLRVSALINQNTLQWDWN 870
Query: 1330 FIRYVFNAETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREIINRNDVLLQHRVP 1389
I + N I Q P S VDK W K+G Y+ RS Y + + Q +
Sbjct: 871 KIAVIL-PNYENLIKQLPAPSSRGVDKLAWLPVKSGQYTSRSGYGIASVASIPIPQTQFN 929
Query: 1390 GKWNIIWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFA 1449
+ N +W L+ PKIK+ +W+ LP ++L+ + + C C E HLFF
Sbjct: 930 WQSN-LWKLQTLPKIKHLMWKAAMEALPVGIQLVRRHISPSAACHRC-GAPESTTHLFFH 987
Query: 1450 CSKSVGCWQRLGFWPSIQQIWSHNAFCADIIFSLLQQLDIAHQQIFAVTLWSLWRHRNNK 1509
C + W+ P + + D + L + + + + + L+ W
Sbjct: 988 CEFAAQVWE---LAPLQETTVPPGSSMLDALSLLKKAIILPPTGVTSAALFP-W------ 1037
Query: 1510 VWNNIVETTEEIGDRAVAFLN--SWKAAQETRIRSSPANPHFDISKWSKPSVGRFKCNVD 1567
I ++G A L+ +W++AQ R N IS+ G F C VD
Sbjct: 1038 ----ICGIYGKLGTMTRAILDALAWQSAQ--RCLPKTRNVVHPISQLPVLRSGYF-CFVD 1090
Query: 1568 AAFSASLHRVGFGACIRDANG--NHVISRTECFTPLLDVEMGEAIGLLHAMRWAKDLNLV 1625
AA+ A G G + A + + L EA + A+ A L
Sbjct: 1091 AAWIAQSSLAGSGWVFQSATALEKETATYSAGCRRLPSALSAEAWAIKSALLHALQLGRT 1150
Query: 1626 NMDFETDSKVVVENIYKGDGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAAHNLAR 1685
++ +DSK VV+ + +++ ++ + R L + FI R AN+ A A+
Sbjct: 1151 DLMVLSDSKSVVDALTSNISINEIYGLLMEIR-ALRVSFHSLCFNFISRSANAIADATAK 1209
>At3g31420 hypothetical protein
Length = 1491
Score = 644 bits (1662), Expect = 0.0
Identities = 415/1348 (30%), Positives = 645/1348 (47%), Gaps = 98/1348 (7%)
Query: 385 IFLSETMAALNKIEELKYILSFDSCFTVDRIGRGGGLAFLWKNSANCTITNFSQNHIDVE 444
I LSET ++I ++ L F + TV G GGL W +S + + + N +D+
Sbjct: 212 ICLSETKQQDDRIRDVGAELGFCNHVTVPPDGLSGGLVVFWNSSVDIFLCFSNSNLVDLH 271
Query: 445 VDDLLIGKWRLTGFYGMPENGRRKESWAFLKNLART-SSLPWCVIGDFNDILSSEEKKGR 503
V G + L+ YG P R W L+ L T W ++GDFN+ILS+ EK+G
Sbjct: 272 VKSNE-GSFYLSFVYGHPNPSHRHHLWERLERLNTTRQGTAWFIMGDFNEILSNREKRGG 330
Query: 504 SERAPWLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFP 563
R + FR V DL G F+W G V LDR + N++W +FP
Sbjct: 331 RLRPERTFQDFRNMVRGCNFTDLKSVGDRFSWAGKRGDHH-VTCSLDRTMANNEWHTLFP 389
Query: 564 NAGVECLSTTSSDHYPLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRW-----K 618
+ + SDH PL R F +++ + FKQ V +W
Sbjct: 390 ESETVFMEYGESDHRPLVTNISAQKEERRG--FFSYDSRLTHKEGFKQVVLNQWHRRNGS 447
Query: 619 LYPEEGITQKLSYCAEDLTDWSRNNN-NFRRDISKVQKKIEKLRTHVTAANVSYFNSLKN 677
+ + +KL C + ++ W +NN N I ++ K+++ TA ++
Sbjct: 448 FEGDSSLNRKLVECRQAISRWKKNNRVNAEERIKIIRHKLDRAIATGTATPRER-RQMRQ 506
Query: 678 KLDKLLVQDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKED 737
L++ ++++W+ ++++ W GD NT++FH+ +RR NR+ +++S+G +CR ++
Sbjct: 507 DLNQAYADEEIYWQTKSRSRWLNAGDRNTRYFHSTTKTRRCRNRLLSVQDSDGDICRGDE 566
Query: 738 ELQNIARNYFSHLFTKLSSTR---ADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQ 794
+ +A NYF L+ +T ADV I+D+ N L T E + + FS+
Sbjct: 567 NIAKVAINYFDDLYKSTPNTSLRYADVFQGFQQKITDEINEDLIRPVTELEIEESVFSVA 626
Query: 795 ADKCPGPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTM 854
+ P PDGF FYQ FW ++ + E N TN+ LIPK + TT+
Sbjct: 627 PSRTPDPDGFTADFYQQFWPDIKQKVIDEVTRFFERSELDERHNHTNLCLIPKVETPTTI 686
Query: 855 KDWRPIALCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMK 914
+RPIALCNV YK+++K+L NRLK L I+ +Q+AFVPGR I +NA++A E+ + +K
Sbjct: 687 AKFRPIALCNVSYKIISKILVNRLKKHLGGAITENQAAFVPGRLITNNAIIAHEVYYALK 746
Query: 915 AKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNG 974
A+ + + +ALK DI+KAYDRL+W++L + M QM F+ KWI IM+CV V ++VL+NG
Sbjct: 747 ARKRQANSYMALKTDITKAYDRLEWDFLEETMRQMGFNTKWIERIMICVTMVRFSVLING 806
Query: 975 VQVGPLIPGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLF 1034
G + P RGIR GDPLSPYLFILCAE LS +I+ AE + G R+ T P ISHLLF
Sbjct: 807 SPHGTIKPERGIRHGDPLSPYLFILCAEVLSHMIKQAEINKKLKGIRLSTQGPFISHLLF 866
Query: 1035 ADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGV 1094
ADD F A+++ + +K + + R+ LG+
Sbjct: 867 ADDSIFFTLANQRSCTAIKE---------------------------PDTKRRMRHLLGI 899
Query: 1095 KQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIP 1154
G GKYLGLP + KK F ++ +++ ++ WS + LSQ G+E+L+K+V ++P
Sbjct: 900 HNEGGEGKYLGLPEQFNKKKKELFNYIIEKVKDKTQGWSKKFLSQGGKEVLLKAVALAMP 959
Query: 1155 SYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRA 1214
Y M+IF L EI+ +L FWW + ++GMHW +W+R+S+PK GG+GFK L
Sbjct: 960 VYSMNIFKLTKEVCEEIDSLLARFWWSSGN-ETKGMHWFTWKRMSIPKKEGGLGFKELEN 1018
Query: 1215 FNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKH 1274
FNLA++GKQ W L+ +P+ L+ ++L+ +YFP ++ +A G S+VW+S+ R+ LK
Sbjct: 1019 FNLALLGKQTWHLLQHPNCLMARVLRGRYFPETNVMNAVQGRRASFVWKSILHGRNLLKK 1078
Query: 1275 GLKWSIGTGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYV 1334
GL+ +G G I+ W PWL L P E
Sbjct: 1079 GLRCCVGDGSLINAWLDPWLP----------------------LHSPRAPYKQE------ 1110
Query: 1335 FNAETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREIINRNDVLLQHRVPGK--- 1391
+ Q+L + + + D W + K+G+Y+V+SAY + H PG
Sbjct: 1111 ---DAPEQLL---VCSTARDDLIGWHYTKDGMYTVKSAYWLATHLPGTTGTHPPPGDIKL 1164
Query: 1392 WNIIWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACS 1451
++W K PKIK+F W++ + T L + + C C EE +HLFF C
Sbjct: 1165 KQLLWKTKTAPKIKHFCWKILSGAIATGEMLRYRHINKQSICKRCCRDEETSQHLFFECD 1224
Query: 1452 KSVGCWQRLGFWPSIQQ---IWSHNAFCADIIFSLLQQLDIAHQQIFAVTLWSLWRHRNN 1508
+ W+ G I Q + F A +F+ +Q+ LW LWR RN
Sbjct: 1225 YAKATWRGAGLPNLIFQDSIVTLEEKFRA--MFTFNPSTTNYWRQLPFWILWRLWRSRNI 1282
Query: 1509 KVWNNIVETTEEIGDRAVAFLNSWKAAQETRIRSSPANP-------HFDISKWSKPSVGR 1561
+ E A W Q+ R NP + ++W++P G
Sbjct: 1283 LTFQQKHIPWEVTVQLAKQDALEW---QDIEDRVQVINPLSRRHSNRYAANRWTRPVCGW 1339
Query: 1562 FKCNVDAAFSASLHRVGFGACIRDANGNHVISRTECFTPLLDVEMGEAIGLLHAMRWAKD 1621
KCN D ++S ++ G IRD +G + + L+ AM+
Sbjct: 1340 KKCNYDGSYSTIINSKA-GWVIRDEHGQFIGGGQAKGKHTNNALESALQALIIAMQSCWS 1398
Query: 1622 LNLVNMDFETDSKVVVENIYKGDGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAAH 1681
+ FE D+ V + + +G D I D + +I R+ N A
Sbjct: 1399 HGHTKVCFEGDNIEVYQILNEGKARFDVYNWIRDIQ-AWKRRFQECRFLWINRRNNKPAD 1457
Query: 1682 NLAREAL-NHASFHYHLNIPHCIHTLIN 1708
LA+ L H F ++ IP I + ++
Sbjct: 1458 TLAKGHLQQHEHFKFYSFIPPVIFSALH 1485
>At2g16680 putative non-LTR retroelement reverse transcriptase
Length = 1319
Score = 635 bits (1638), Expect = 0.0
Identities = 401/1343 (29%), Positives = 667/1343 (48%), Gaps = 78/1343 (5%)
Query: 404 LSFDSCFTVDRIGRGGGLAFLWKNSANCTITNFSQNHIDVEVDDLLIGK--WRLTGFYGM 461
L +D T++ +G+ GGLA WKN +N +D++V GK W ++ YG
Sbjct: 14 LGYDYFHTIEPVGKSGGLAIFWKNHLEIDFLFEDKNLLDLKVSQ---GKKSWFVSCVYGN 70
Query: 462 PENGRRKESWAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDA 521
P R L ++ + WC+IGDFNDILS++ K G R + F+ +L+
Sbjct: 71 PVLHLRYLLLDKLSSIGVQRNSAWCMIGDFNDILSNDGKLGGPSRLISSFQPFKNMLLNC 130
Query: 522 GLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLW 581
+ + +G +FTW + + ++ KLDR NS+W MF N+ L S H P+
Sbjct: 131 DMHQMGSSGNSFTWGGTRND-QWIQCKLDRCFGNSEWFTMFSNSHQWFLEKLGSHHRPVL 189
Query: 582 LTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRW---KLYPEEGITQKLSYCAEDLTD 638
+ V R +F ++ + +P W + ++ C + ++
Sbjct: 190 VNFVNDQEVFRG--QFCYDKRFAEDPQCAASTLSSWIGNGISDVSSSMLRMVKCRKAISG 247
Query: 639 WSRNNN-NFRRDISKVQKKI--EKLRTHVTAANVSYFNSLKNKLDKLLVQDDLFWKQRAK 695
W +N++ N + I +++ ++ EK + + + +S ++ +L +++ FW+ ++K
Sbjct: 248 WKKNSDFNAQNRILRLRSELDEEKSKQYPCWSRISV---IQTQLGVAFREEESFWRLKSK 304
Query: 696 TFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLF-TKL 754
W GD N+KFF A + R N + L + NG E NIA YF +LF +
Sbjct: 305 DKWLFGGDRNSKFFQAMVKANRTKNSLRFLVDENGNEHTLNREKGNIASVYFENLFMSSY 364
Query: 755 SSTRADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWN 814
+ + T +S++ N LT A T E +A FS+ + P
Sbjct: 365 PANSQSALDGFKTRVSEEMNQELTQAVTELEIHSAVFSINVESAPEK-----------LE 413
Query: 815 MCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVL 874
C + + E GV P N T++ LIPK M D RPI+LC+V+YK+++K+L
Sbjct: 414 CCQGSDYIEILGFFETGVLPQEWNHTHLYLIPKFTNPQRMSDIRPISLCSVLYKIISKIL 473
Query: 875 ANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAY 934
+ +LK L +S SQSAF R I DN L+A E++H ++ K S+ + K D+SKAY
Sbjct: 474 SFKLKKHLPSIVSPSQSAFFAERLISDNILIAHEIVHSLRTNDKISKEFMVFKTDMSKAY 533
Query: 935 DRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSP 994
DR++W +L++I++ + F++KWI WIM CV +V Y+VL+NG G + P RGIRQGDP+SP
Sbjct: 534 DRVEWSFLQEILVALGFNDKWISWIMGCVTSVTYSVLINGQHFGHITPERGIRQGDPISP 593
Query: 995 YLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMKN 1054
+LF+LC E L +++ AE ++G + S P+++HLLF DD L RA++ + M
Sbjct: 594 FLFVLCTEALIHILQQAENSKKVSGIQFNGSGPSVNHLLFVDDTQLVCRATKSDCEQMML 653
Query: 1055 ILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSK 1114
L+ Y SGQ IN++KS + + + I G+ GTGKYLGLP + SK
Sbjct: 654 CLSQYGHISGQLINVEKSSITFGVKVDEDTKRWIKNRSGIHLEGGTGKYLGLPENLSGSK 713
Query: 1115 KATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKM 1174
+ F ++K+++ + ++ W + LSQ G+EIL+KS+ ++P Y+M+ F LP ++ +
Sbjct: 714 QDLFGYIKEKLQSHLSGWYDKTLSQGGKEILLKSIALALPVYIMTCFRLPKGLCTKLTSV 773
Query: 1175 LNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSL 1234
+ FWW ++ S +HW+ ++L++PK+ GG GFK L+ FN A++ KQAW+L S+ S+
Sbjct: 774 MMDFWW-NSMEFSNKIHWIGGKKLTLPKSLGGFGFKDLQCFNQALLAKQAWRLFSDSKSI 832
Query: 1235 ITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQPWL 1294
++++ K++YF ++D+ +A G PSY WRS+ R+ L GLK IG GE +VW WL
Sbjct: 833 VSQIFKSRYFMNTDFLNARQGTRPSYTWRSILYGRELLNGGLKRLIGNGEQTNVWIDKWL 892
Query: 1295 KDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAETSNQIL-QTPLLQSVQ 1353
D +P+ +M + V HL P T+ WN + +F+ + I+ Q PL+ S
Sbjct: 893 FDGHSRRPMNLHSLMNIHMKVSHLIDPLTRNWNLKKLTELFHEKDVQLIMHQRPLISS-- 950
Query: 1354 VDKATWRFEKNGLYSVRSAY----REIINR--NDVLLQHRVPGKWNIIWNLKLPPKIKNF 1407
D W NGLY+V+S Y RE + + V ++ +W+L+ PKIK F
Sbjct: 951 EDSYCWAGTNNGLYTVKSGYERSSRETFKNLFKEADVYPSVNPLFDKVWSLETVPKIKVF 1010
Query: 1408 LWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCWQRLGFWPSIQ 1467
+W+ + L RL S+G++ C C E HL F C P +
Sbjct: 1011 MWKALKGALAVEDRLRSRGIRTADGCLFCKEEIETINHLLFQC-------------PFAR 1057
Query: 1468 QIWSHNAFCADI------IFSLLQQLDIAHQQIFAV----------TLWSLWRHRNNKVW 1511
Q+W+ + A IFS + + I + Q F + LW +W++RN ++
Sbjct: 1058 QVWALSLIQAPATGFGTSIFSNINHV-IQNSQNFGIPRHMRTVSPWLLWEIWKNRNKTLF 1116
Query: 1512 NNIVETTEEIGDRAVAFLNSWKAAQETRIRSSPANPHFDISKWSKPSVGRFKCNVDAAFS 1571
T+ EI +A N W AQE + H KW+ P G KCN+ A+S
Sbjct: 1117 QGTGLTSSEIVAKAYEECNLWINAQEKSSGGVSPSEH----KWNPPPAGELKCNIGVAWS 1172
Query: 1572 ASLHRVGFGACIRDANGNHVISRTECFTPLLDVEMGEAIGLLHAMRWAKDLNLVNMDFET 1631
G +RD+ G ++ ++ + + + A+ + + F
Sbjct: 1173 RQKQLAGVSWVLRDSMGQVLLHSRRSYSQVYSLFDAKIKSWDWALESMDHFHFDKVTFAA 1232
Query: 1632 DSKVVVENIYKGDGVSDFMAIIHDCRHLLMT-DLANSDVKFIRRQANSAAHNLAREALNH 1690
S +++ ++K + M I H L T D+++ + Q N+ A +A+ +
Sbjct: 1233 TSHDIIKALHKPNEWP--MLIGHIAEFLSFTKDISDWFMMMESTQCNNGAAEIAKSVITG 1290
Query: 1691 ASFHYHL--NIPHCIHTLINNEK 1711
+ ++ + PH + +L E+
Sbjct: 1291 MRWQSYVACSFPHWLRSLFEEER 1313
>At4g10830 putative protein
Length = 1294
Score = 627 bits (1618), Expect = e-179
Identities = 343/933 (36%), Positives = 517/933 (54%), Gaps = 16/933 (1%)
Query: 362 RGLGSPSTVPTLKYLVRTYKPEGIFLSETMAALNKIEELKYILSFDSCFTVDRIGRGGGL 421
+G+G P T L L + +K + +FL ET+ I L +L F + T G GGL
Sbjct: 370 KGIGVPLTQSQLSNLCKVFKFDVLFLIETLNKCEVISNLASVLGFPNVITQPPQGHSGGL 429
Query: 422 AFLWKNSANCTITNFSQNHIDVEVDDLLIGKWRLTGFYGMPENGRRKESWAFLKNLARTS 481
A LWK+S + HIDV + I + L+ YG P R W +NL++T
Sbjct: 430 ALLWKDSVRLSNLYQDDRHIDVHISINNINFY-LSRVYGHPCQSERHSLWTHFENLSKTR 488
Query: 482 SLPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGT 541
+ PW +IGDFN+ILS+ EK G +R W RGFR V L D+ G F+W +
Sbjct: 489 NDPWILIGDFNEILSNNEKIGGPQRDEWTFRGFRNMVSTCDLKDIRSIGDRFSWVGERHS 548
Query: 542 ARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLWLTCKPVTAVNRNPHRFKFEN 601
V+ LDRA +NS+ +FP A +E L T SDH PL+L+ + P F+F+
Sbjct: 549 -HTVKCCLDRAFINSEGAFLFPFAELEFLEFTGSDHKPLFLSLEKTETRKMRP--FRFDK 605
Query: 602 AWLAEPDFKQQVQQRWKLY---PEEGITQKLSYCAEDLTDWSRNNN-NFRRDISKVQKKI 657
L P FK V+ W + + ++ C + + +N N R I+++Q +
Sbjct: 606 RLLEVPHFKTYVKAGWNKAINGQRKHLPDQVRTCRQAMAKLKHKSNLNSRIRINQLQAAL 665
Query: 658 EKLRTHVTAANVSYFNSLKNKLDKLLVQDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRR 717
+K + V + ++ +L ++ +W+Q+++ W KEGD NT+FFHA +R
Sbjct: 666 DKAMSSVNRTERRTISHIQRELTVAYRDEERYWQQKSRNQWMKEGDRNTEFFHACTKTRF 725
Query: 718 KVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFTKLSSTRADV----ISKVATSISDDD 773
VNR+ +++ G + R + E+ A+ +F+ ++ + + + T +DD
Sbjct: 726 SVNRLVTIKDEEGMIYRGDKEIGVHAQEFFTKVYESNGRPVSIIDFAGFKPIVTEQINDD 785
Query: 774 NCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVF 833
LT + E A + DK PGPDG FY++ W + G ++ K +
Sbjct: 786 ---LTKDLSDLEIYNAICHIGDDKAPGPDGLTARFYKSCWEIVGPDVIKEVKIFFRTSYM 842
Query: 834 PPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVLANRLKNVLDKCISTSQSAF 893
+N TNI +IPK T+ D+RPIALCNV+YK+++K L RLK LD +S SQ+AF
Sbjct: 843 KQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERLKGHLDAIVSDSQAAF 902
Query: 894 VPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSE 953
+PGR + DN ++A E++H +K + + SQ +A+K D+SKAYDR++W +L M FSE
Sbjct: 903 IPGRLVNDNVMIAHEMMHSLKTRKRVSQSYMAVKTDVSKAYDRVEWNFLETTMRLFGFSE 962
Query: 954 KWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSPYLFILCAEGLSALIRDAER 1013
WI+WIM V++V+Y+VLVNG+ G + P RGIRQGDPLSPYLFILCA+ L+ LI++
Sbjct: 963 TWIKWIMGAVKSVNYSVLVNGIPHGTIQPQRGIRQGDPLSPYLFILCADILNHLIKNRVA 1022
Query: 1014 RGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSE 1073
G I G RI P ++HL FADD F +++ + +K++ YE SGQ IN+ KS
Sbjct: 1023 EGDIRGIRIGNGVPGVTHLQFADDSLFFCQSNVRNCQALKDVFDVYEYYSGQKINMSKSM 1082
Query: 1074 MYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWS 1133
+ QNR+ LG++ G GKYLGLP GR K+ F ++ +R+ R +SWS
Sbjct: 1083 ITFGSRVHGTTQNRLKNILGIQSHGGGGKYLGLPEQFGRKKRDMFNYIIERVKKRTSSWS 1142
Query: 1134 SRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWL 1193
++ LS AG+EI++KSV S+P Y MS F LP + EIE +L FWW N A R + W+
Sbjct: 1143 AKYLSPAGKEIMLKSVAMSMPVYAMSCFKLPLNIVSEIEALLMNFWWEKN-AKKREIPWI 1201
Query: 1194 SWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSAS 1253
+W+RL K GG+GF+ L FN A++ KQ W++I+NP+SL +++KA+YF A
Sbjct: 1202 AWKRLQYSKKEGGLGFRDLAKFNDALLAKQVWRMINNPNSLFARIMKARYFREDSILDAK 1261
Query: 1254 IGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETI 1286
SY W S+ + D +K G ++ +G G+T+
Sbjct: 1262 RQRYQSYGWTSMLAGLDVIKKGSRFIVGDGKTV 1294
>At3g32110 non-LTR reverse transcriptase, putative
Length = 1911
Score = 564 bits (1454), Expect = e-160
Identities = 401/1356 (29%), Positives = 645/1356 (46%), Gaps = 73/1356 (5%)
Query: 380 YKPEGIFLSETMAALNKIEELKYILSFDSCFTVDRIGRGGGLAFLWKNS-ANCTITNFSQ 438
Y + + + ET A ++ + L F++ F VD +G GGL LW+ ++ + +
Sbjct: 592 YITDVLAIFETHAGGDQASRICQGLGFENSFRVDAVGHSGGLWLLWRTGIGEVSVVDSTD 651
Query: 439 NHI---DVEVDDLLIGKWRLTGFYGMPENGRRKESWAFLKNLARTSSLPWCVIGDFNDIL 495
I DV D + L Y P RR W L ++ R+ P + GDFN I+
Sbjct: 652 QFIHAKDVNGKDNV----NLVVVYAAPTASRRSGLWDRLGDVIRSMDGPVVIGGDFNTIV 707
Query: 496 SSEEKKGRSERAPWLIRGFRQAVLDAGLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVN 555
+E+ G + R F + + D L DL G FTW + V ++LDR L
Sbjct: 708 RLDERSGGNGRLSSDSLAFGEWINDHSLIDLGFKGNKFTWKRGREERFFVAKRLDRVLCC 767
Query: 556 SDWCNMFPNAGVECLSTTSSDHYPLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQ 615
+ + A V L +SDH PL++ P + NR F+FE AWL+ P FK+ +
Sbjct: 768 AHARLKWQEASVLHLPFLASDHAPLYVQLTPEVSGNRGRRPFRFEAAWLSHPGFKELL-- 825
Query: 616 RWKLYPEEGITQKLSYCAEDLTDWSRNNNNFRRDISKVQKKIEKLRTHVTAANVSYFNSL 675
LT W+++ + + KVQ E L H + + L
Sbjct: 826 --------------------LTSWNKDIST--PEALKVQ---ELLDLHQSDDLLKKEEEL 860
Query: 676 KNKLDKLLVQDDLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRK 735
D +L Q+++ W Q+++ W+ GD NTKFFH + RR+ N+IE L++++G
Sbjct: 861 LKDFDVVLEQEEVVWMQKSREKWFVHGDRNTKFFHTSTIIRRRRNQIEMLQDNDGRWLSN 920
Query: 736 EDELQNIARNYFSHLFT--KLSSTRADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSM 793
EL+ A +Y+ L++ L + + + T++S+ D LT F+ E + A SM
Sbjct: 921 AQELETHAIDYYKRLYSLDDLDAVVEQLPQEGFTALSEADFSSLTKPFSPLEVEGAIRSM 980
Query: 794 QADKCPGPDGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTT 853
K PGPDGF P FYQ W + G + K ++ +G FP N + LI K
Sbjct: 981 GKYKAPGPDGFQPVFYQQGWEVVGESVTKFVMDFFSSGSFPQETNDVLVVLIAKVLKPEK 1040
Query: 854 MKDWRPIALCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYM 913
+ +RPI+LCNV++K + KV+ RLK V++K I +Q++F+PGR DN +V E++H M
Sbjct: 1041 ITQFRPISLCNVLFKTITKVMVGRLKGVINKLIGPAQTSFIPGRLSTDNIVVVQEVVHSM 1100
Query: 914 KAKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVN 973
+ K KG +G + LKLD+ KAYDR+ W+ L D + W++WIM CVE +L N
Sbjct: 1101 RRK-KGVKGWMLLKLDLEKAYDRIRWDLLEDTLKAAGLPGTWVQWIMKCVEGPSMRLLWN 1159
Query: 974 GVQVGPLIPGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLL 1033
G + P RG+RQGDPLSPYLF+LC E L LI + +I S P +SH+
Sbjct: 1160 GEKTDAFKPLRGLRQGDPLSPYLFVLCIERLCHLIESSIAAKKWKPIKISQSGPRLSHIC 1219
Query: 1034 FADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLG 1093
FADD LF AS + V++ +L + ASGQ ++L+KS++Y S+N + RI+ G
Sbjct: 1220 FADDLILFAEASIDQIRVLRGVLEKFCGASGQKVSLEKSKIYFSKNVLRDLGKRISEESG 1279
Query: 1094 VKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSI 1153
+K GKYLG+P + R K TF V R +R+ W R LS AGR L K+VL SI
Sbjct: 1280 MKATKDLGKYLGVPILQKRINKETFGEVIKRFSSRLAGWKGRMLSFAGRLTLTKAVLTSI 1339
Query: 1154 PSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLR 1213
+ MS LP + + ++K+ AF WG ++ + H ++W R+ +P+ GG+G +S
Sbjct: 1340 LVHTMSTIKLPQSTLDGLDKVSRAFLWG-STLEKKKQHLVAWTRVCLPRREGGLGIRSAT 1398
Query: 1214 AFNLAMIGKQAWKLISNPDSLITKLLKAKY---FPHSDYFSASIGHNPSYVWRSLW-SVR 1269
A N A+I K W+++++ SL +++++KY H ++ + N S WRS+ +R
Sbjct: 1399 AMNKALIAKVGWRVLNDGSSLWAQVVRSKYKVGDVHDRNWTVA-KSNWSSTWRSVGVGLR 1457
Query: 1270 DYLKHGLKWSIGTGETISVWNQPWLKD-PLCLQPVTEVQIMWDALTVGHLFKPNTKEWNE 1328
D + W IG G I W WL + P+ + + + T L++ T W+
Sbjct: 1458 DVIWREQHWVIGDGRQIRFWTDRWLSETPIADDSIVPLSLAQMLCTARDLWRDGT-GWDM 1516
Query: 1329 NFIRYVFNAETSNQILQTPLLQSV--QVDKATWRFEKNGLYSVRSAYREIINRNDVLLQH 1386
+ I F + L ++ SV D+ W +G ++V+SA+ + ND +
Sbjct: 1517 SQIA-PFVTDNKRLDLLAVIVDSVTGAHDRLAWGMTSDGRFTVKSAFAML--TNDDSPRQ 1573
Query: 1387 RVPGKWNIIWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHL 1446
+ + +W ++ P +++ FLW V + T + + C +C E H+
Sbjct: 1574 DMSSLYGRVWKVQAPERVRVFLWLVVNQAIMTNSERKRRHLCDSDVCQVCRGGIESILHV 1633
Query: 1447 FFACSKSVGCWQRLGFWPSIQQIWSHNAFCADIIFSLLQQLDIAH----QQIFAVTLWSL 1502
C G W R+ P Q + ++S L+Q + +FA+ +W
Sbjct: 1634 LRDCPAMSGIWDRI--VPRRLQQSFFTMSLLEWLYSNLRQGLMTEGSDWSTMFAMAVWWG 1691
Query: 1503 WRHRNNKVW---NNIVETTEEIGDRAVAFLNSWKAAQETRIRSSPANPHFDISKWSKPSV 1559
W+ R + ++ + I D AV ++ E R+ N +W+ P
Sbjct: 1692 WKWRCSNIFGENKTCRDRVRFIKDLAVEVSIAYSREVELRLSGLRVNKPI---RWTPPME 1748
Query: 1560 GRFKCNVDAAFSASLHRVGFGACIRDAN----GNHVISRTECFTPLLDVEMGEAIGLLHA 1615
G +K N D A + G +R++ G ++ C PL ++ G GL
Sbjct: 1749 GWYKINTDGASRGNPGLASAGGVLRNSAGAWCGGFAVNIGRCSAPLAEL-WGVYYGLY-- 1805
Query: 1616 MRWAKDLNLVNMDFETDSKVVVENIYKGDGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQ 1675
M WAK L +++ E DS+VVV + G G + ++ + H ++ + + R+
Sbjct: 1806 MAWAK--QLTHLELEVDSEVVVGFLKTGIGETHPLSFLVRLCHNFLSKDWTVRISHVYRE 1863
Query: 1676 ANSAAHNLAREALN-HASFHYHLNIPHCIHTLINNE 1710
ANS A LA A + H IP + L++ +
Sbjct: 1864 ANSLADGLANHAFSLSLGLHVFDEIPISLVMLLSED 1899
>At2g41580 putative non-LTR retroelement reverse transcriptase
Length = 1094
Score = 562 bits (1449), Expect = e-160
Identities = 325/988 (32%), Positives = 532/988 (52%), Gaps = 34/988 (3%)
Query: 628 KLSYCAEDLTDWSRNNN-NFRRDISKVQKKIEKLRTHVTAANVSYFNSLKNKLDKLLVQD 686
+L C + ++ W R N+ N + I+K++++++K ++ T + + + L++ L ++
Sbjct: 3 RLVECRKAISQWKRENDFNAKSRITKLRRELDKEKS-ATFPSWTQISLLQDVLGDAYREE 61
Query: 687 DLFWKQRAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNY 746
+ FW+ +++ W GD N+KFF A + R N + L + NG E IA +
Sbjct: 62 EDFWRLKSRDKWMVGGDKNSKFFQATVKANRVSNSLRFLVDENGNEQTVNREKGKIAVTF 121
Query: 747 FSHLFTKLSSTRAD-VISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFN 805
F LF+ + D V+ +++D N LT +E A FS+ A+ PGPDGF
Sbjct: 122 FEDLFSSSYPSSMDSVLEGFNKRVTEDMNQDLTKKVNEQEIYKAVFSINAESAPGPDGFT 181
Query: 806 PGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNV 865
F+Q W + ++I + + G+ P N T++ LIPK M D RPI+LC+V
Sbjct: 182 ALFFQRQWPLVKNQIISDIELFFQTGILPEDWNHTHLCLIPKITKPARMADIRPISLCSV 241
Query: 866 VYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVA 925
+YK+++K+L+ RLK L +S +QSAFV R + DN ++A E++H ++ K S+ +
Sbjct: 242 MYKIISKILSARLKKYLPVIVSPTQSAFVAERLVSDNIILAHEIVHNLRTNEKISKDFMV 301
Query: 926 LKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRG 985
K D+SKAYDR++W +L+ I++ + F+ WI W+M CV +V Y+VL+NG G + P RG
Sbjct: 302 FKTDMSKAYDRVEWPFLKGILLALGFNSTWINWMMACVSSVSYSVLINGQPFGHITPHRG 361
Query: 986 IRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRAS 1045
+RQGDPLSP+LF+LC E L ++ AE+ G I+G + + P+++HLLFADD L +AS
Sbjct: 362 LRQGDPLSPFLFVLCTEALIHILNQAEKIGKISGIQFNGTGPSVNHLLFADDTLLICKAS 421
Query: 1046 EQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLG 1105
+ E + + + L+ Y SGQ IN +KS + E + I G++ GTGKYLG
Sbjct: 422 QLECAEIMHCLSQYGHISGQMINSEKSAITFGAKVNEETKQWIMNRSGIQTEGGTGKYLG 481
Query: 1106 LPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPS 1165
LP SK+ F F+K+++ +R++ W ++ LSQ G++IL+KS+ + P Y M+ F L
Sbjct: 482 LPECFQGSKQVLFGFIKEKLQSRLSGWYAKTLSQGGKDILLKSIAMAFPVYAMTCFRLSK 541
Query: 1166 TFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAW 1225
T ++ ++ FWW ++ + + +HW+ ++L +PK GG GFK L+ FN A++ KQA
Sbjct: 542 TLCTKLTSVMMDFWW-NSVQDKKKIHWIGAQKLMLPKFLGGFGFKDLQCFNQALLAKQAS 600
Query: 1226 KLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGET 1285
+L ++ DSL++++LK++Y+ +SD+ SA+ G PSY W+S+ R+ L GLK IG GE
Sbjct: 601 RLHTDSDSLLSQILKSRYYMNSDFLSATKGTRPSYAWQSILYGRELLVSGLKKIIGNGEN 660
Query: 1286 ISVWNQPWLKDPLCLQPVTEVQIMWD-ALTVGHLFKPNTKEWNENFIRYVFNAETSNQIL 1344
VW W+ D +P +QIM D L V L P ++ WN N +R +F + I
Sbjct: 661 TYVWMDNWIFDDKPRRP-ESLQIMVDIQLKVSQLIDPFSRNWNLNMLRDLFPWKEIQIIC 719
Query: 1345 QTPLLQSVQVDKATWRFEKNGLYSVRSAY----REIINR--NDVLLQHRVPGKWNIIWNL 1398
Q + S Q D W +GLY+V+S Y R++ + + Q + + IWNL
Sbjct: 720 QQRPMASRQ-DSFCWFGTNHGLYTVKSEYDLCSRQVHKQMFKEAEEQPSLNPLFGKIWNL 778
Query: 1399 KLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCWQ 1458
PKIK FLW+V + + RL ++GV C++C E H+ F C + W
Sbjct: 779 NSAPKIKVFLWKVLKGAVAVEDRLRTRGVLIEDGCSMCPEKNETLNHILFQCPLARQVW- 837
Query: 1459 RLGFWPSIQQIWSHNAFCADIIFSLLQ---------QLDIAHQQIFAVTLWSLWRHRNNK 1509
++ + S N D IF+ + +L + + +W LW++RN +
Sbjct: 838 ------ALTPMQSPNHGFGDSIFTNVNHVIGNCHNTELSPHLRYVSPWIIWILWKNRNKR 891
Query: 1510 VWNNIVETTEEIGDRAVAFLNSWKAAQETRIRSSPANPHFDISKWSKPSVGRFKCNVDAA 1569
++ I + I +A+ W A E P D++ W P + KCN+ A
Sbjct: 892 LFEGIGSVSLSIVGKALEDCKEWLKAHELICSKEPTK---DLT-WIPPLMNELKCNIGIA 947
Query: 1570 FSASLHRVGFGACIRDANGNHVISRTEC 1597
+S G +R+ G V+ + C
Sbjct: 948 WSKKHQMAGVSWVVRNWKG-RVLLHSRC 974
>At3g45550 putative protein
Length = 851
Score = 535 bits (1379), Expect = e-152
Identities = 313/843 (37%), Positives = 462/843 (54%), Gaps = 18/843 (2%)
Query: 743 ARNYFSHLFTKLSSTRADV-ISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGP 801
A+ +F+ +FT + + + +S+++ N LT F E A + DK PGP
Sbjct: 10 AQKFFTDIFTTNGIQVSPIDFADFPSSVTNIINSELTQDFRDSEIFEAICQIGDDKAPGP 69
Query: 802 DGFNPGFYQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIA 861
DG FY+ W++ G+++ K + E+ +N TNI +IPK T+ D+RPIA
Sbjct: 70 DGLTARFYKQCWDIVGNDVIKEVKLFFESSHMKTSVNHTNICMIPKIQNPQTLSDYRPIA 129
Query: 862 LCNVVYKMVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQ 921
LCNV+YK+++K + NRLK L+ +S SQ+AF+PGR I DN ++A E++H +K + + S+
Sbjct: 130 LCNVLYKVISKCMVNRLKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRKRVSK 189
Query: 922 GDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLI 981
+A+K D+SKAYDR++W++L M F +KWI WIM V++V Y+VL+NG G +
Sbjct: 190 TYMAVKTDVSKAYDRVEWDFLETTMRLFGFCDKWIGWIMAAVKSVHYSVLINGSPHGYIS 249
Query: 982 PGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLF 1041
P RGIRQGDPLSPYLFILC + LS LI+ G I G RI APAI+HL FADD F
Sbjct: 250 PTRGIRQGDPLSPYLFILCGDILSHLIKVKASSGDIRGVRIGNGAPAITHLQFADDSLFF 309
Query: 1042 FRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTG 1101
+A+ + +K++ YE SGQ IN+QKS + Q R+ T L + G G
Sbjct: 310 CQANVRNCQALKDVFDVYEYYSGQKINVQKSLITFGSRVYGSTQTRLKTLLNIPNQGGGG 369
Query: 1102 KYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIF 1161
KYLGLP GR KK F ++ DR+ R SWS++ LS AG+EIL+KSV ++P Y MS F
Sbjct: 370 KYLGLPEQFGRKKKEMFNYIIDRVKERTASWSAKFLSPAGKEILLKSVALAMPVYAMSCF 429
Query: 1162 LLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIG 1221
LP + EIE +L FWW ++N RG+ W++W+RL K GG+GF+ L FN A++
Sbjct: 430 KLPQGIVSEIESLLMNFWW-EKASNKRGIPWVAWKRLQYSKKEGGLGFRDLAKFNDALLA 488
Query: 1222 KQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIG 1281
KQAW++I P+SL +++KA+YF + A SY W SL S L+ G ++ IG
Sbjct: 489 KQAWRIIQYPNSLFARVMKARYFKDNSIIDAKTRSQQSYGWSSLLSGIALLRKGTRYVIG 548
Query: 1282 TGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHLF--KPNTKEWNENFIRYVFNAET 1339
G+TI + + +T+ Q + L++ +LF + +++ W+ ++ +
Sbjct: 549 DGKTIRLGIDNVVDSHPPRPLLTDEQ--HNGLSLDNLFQHRGHSRCWDNAKLQTFVDQSD 606
Query: 1340 SNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREIIN--RNDVLLQHRVPGKWNI--- 1394
+ I + L + D+ W + G Y+VRS Y + N + + G ++
Sbjct: 607 HDYIKRIYLSTRSKTDRLIWSYNSTGDYTVRSGYWLSTHDPSNTIPTMAKPHGSVDLKTK 666
Query: 1395 IWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSV 1454
IWNL + PK+K+FLWR+ LPT RL ++G++ P C C E H F C +
Sbjct: 667 IWNLPIMPKLKHFLWRILSKALPTTDRLTTRGMRIDPGCPRCRRENESINHALFTCPFAT 726
Query: 1455 GCWQRLGFWPSIQQIWSHNAFCADI--IFSLLQQLDIAHQQ--IFAVTLWSLWRHRNNKV 1510
W RL P + N +I I LLQ I Q I LW +W+ RNN V
Sbjct: 727 MAW-RLSDTPLYRSSILSNNIEDNISNILLLLQNTTITDSQKLIPFWLLWRIWKARNNVV 785
Query: 1511 WNNIVETTEEIGDRAVAFLNSWKAAQETR--IRSSPANPHFDISKWSKPSVGRFKCNVDA 1568
+NN+ E+ RA A N W A +T+ R + W KP + KCN DA
Sbjct: 786 FNNLRESPSITVVRAKAETNEWLNATQTQGPRRLPKRTTAAGNTTWVKPQMPYIKCNFDA 845
Query: 1569 AFS 1571
+F+
Sbjct: 846 SFN 848
>At2g11240 pseudogene
Length = 1044
Score = 525 bits (1351), Expect = e-148
Identities = 296/844 (35%), Positives = 454/844 (53%), Gaps = 24/844 (2%)
Query: 520 DAGLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYP 579
+ L+DL +G +W + V +LDRAL N W +P + L SDH P
Sbjct: 3 ECDLYDLRHSGNFLSW-RGKRHDHVVHCRLDRALSNGAWAEDYPASRCIYLCFEGSDHRP 61
Query: 580 LW----LTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRWKLYPEEGITQKLSYCAED 635
L L+ K V R R K + A VQ+ W LY + + +K+S C +
Sbjct: 62 LLTHFDLSKKKKKGVFRYDRRLKNNDEVTA------LVQEAWNLYDTDIVEEKISRCRLE 115
Query: 636 LTDWSRNNNNFRRDISKVQKKIEKLRTHVTAA--NVSYFNSLKNKLDKLLVQDDLFWKQR 693
+ WSR + + +++ +KL +++ N +++ L ++ +WKQR
Sbjct: 116 IVKWSRAKQQSSQKL--IEENRQKLEEAMSSQDHNQELLSTINTNLLLAYKAEEEYWKQR 173
Query: 694 AKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFTK 753
++ W GD N+ +FHA R +N+ +E +G +E + N+ YF LF+
Sbjct: 174 SRQLWLALGDKNSGYFHAITRGRTVINKFSVIEKEDGVPEYEEAGILNVISEYFQKLFSA 233
Query: 754 LSSTRADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFW 813
RA I + F++ EE K+A FS+ ADK PGPDGF+ F+Q+ W
Sbjct: 234 NEGARAATIKEAIKP-------FISPEQNPEEIKSACFSIHADKAPGPDGFSASFFQSNW 286
Query: 814 NMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKV 873
G I + + P +N T+I LIPK + M D+RPIALC V YK+++K+
Sbjct: 287 MTVGPNIVLEIQSFFSSSTLQPTINKTHITLIPKIQSLKRMVDYRPIALCTVFYKIISKL 346
Query: 874 LANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKA 933
L+ RL+ +L + IS +QSAFVP R+ DN L+ E +HY+K+ + +A+K ++SKA
Sbjct: 347 LSRRLQPILQEIISENQSAFVPKRASNDNVLITHEALHYLKSLGAEKRCFMAVKTNMSKA 406
Query: 934 YDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLS 993
YDR++W++++ +M +M F + WI WI+ C+ TV Y+ L+NG G + P RG+RQGDPLS
Sbjct: 407 YDRIEWDFIKLVMQEMGFHQTWISWILQCITTVSYSFLLNGSAQGAVTPERGLRQGDPLS 466
Query: 994 PYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMK 1053
P+LFI+C+E LS L R A+ G + G R+ P ++HLLFADD F R+ +
Sbjct: 467 PFLFIICSEVLSGLCRKAQLDGSLLGLRVSKGNPRVNHLLFADDTIFFCRSDLKSCKTFL 526
Query: 1054 NILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRS 1113
IL YE ASGQ IN KS + SR TP + LG++ V G GKYLGLP M GR
Sbjct: 527 CILKKYEEASGQMINKSKSAITFSRKTPDHIKTEAQQILGIQLVGGLGKYLGLPKMFGRK 586
Query: 1114 KKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEK 1173
K+ F + DRI R SWSSR LS AG+ ++KSVL S+P+Y MS F L + I+
Sbjct: 587 KRDLFNQIVDRIRQRSLSWSSRFLSTAGKTTMLKSVLASMPTYTMSCFKLLVSLCKRIQS 646
Query: 1174 MLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDS 1233
L FWW +SA+ + M W++W +++ K GG+GFK + FN A++ K +W+++ +P
Sbjct: 647 ALTHFWW-DSSADKKKMCWIAWSKMAKNKKEGGLGFKDITNFNDALLAKLSWRIVQSPSC 705
Query: 1234 LITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQPW 1293
++ ++L KY S + S+ S+ WR + + +D +K L IG+G VWN+PW
Sbjct: 706 VLVRILLGKYCRTSSFLDCSVTAASSHGWRGICTGKDLIKSQLGKVIGSGLDTLVWNEPW 765
Query: 1294 LKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENFIRYVFNAETSNQILQ-TPLLQSV 1352
L P+ + ++TV L TK W+ + + +T+ Q + T + Q +
Sbjct: 766 LSLSTSSTPMGPALEQFKSMTVAQLICQTTKSWDREKVWDLSPFKTTLQASRITSMKQGL 825
Query: 1353 QVDK 1356
+V K
Sbjct: 826 EVSK 829
Score = 51.2 bits (121), Expect = 5e-06
Identities = 49/210 (23%), Positives = 93/210 (43%), Gaps = 14/210 (6%)
Query: 1484 LQQLDIAHQQIFAVTLWSLWRHRNNKVWNNIVETTEEIGDRAVAFLNSWKAAQETRIRSS 1543
L + I Q+ LW+LW RN ++ ++ ++ ++++ W AQ +S
Sbjct: 834 LPPIGIGQGQLPIWILWNLWNCRNKLIFEQKHISSMDLISQSISQSTEWLGAQIQASKSK 893
Query: 1544 PANPHFDISKWSKPSVGRFKCNVDAAFSASLHRVGFGACIRDANGNHVISRTECF----- 1598
P S+ ++ +C+ DA++ + GFG D + NH+ S +
Sbjct: 894 IVIPGISPSEIDLDTI---QCSTDASWREETLQAGFGWVFVD-HSNHLESHHKAAAMNIR 949
Query: 1599 TPLLDVEMGEAIGLLHAMRWAKDLNLVNMDFETDSKVVVENIYKGDGVSDFMAIIHDCRH 1658
+PLL +A L A++ A DL + +DS+ +V+ + + I+ D
Sbjct: 950 SPLL----AKASALSLAIQHAADLGFKKLVVASDSQQLVKVLNGEPHPMELHGIVFDI-S 1004
Query: 1659 LLMTDLANSDVKFIRRQANSAAHNLAREAL 1688
+L + + F++R+ NS A LA+ AL
Sbjct: 1005 VLSLNFEENSFSFVKRENNSKADALAKAAL 1034
>At2g31080 putative non-LTR retroelement reverse transcriptase
Length = 1231
Score = 498 bits (1283), Expect = e-141
Identities = 364/1254 (29%), Positives = 587/1254 (46%), Gaps = 90/1254 (7%)
Query: 459 YGMPENGRRKESWAFLKNLARTSSLPWCVIGDFNDILSSEEKKGRSERAPWLIRGFRQAV 518
Y P RR W LK++ P + GDFN IL +E+ G + R F +
Sbjct: 7 YAAPSVSRRSGLWGELKDVVNGLEGPLLIGGDFNTILWVDERMGGNGRLSPDSLAFGDWI 66
Query: 519 LDAGLFDLHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHY 578
+ L DL G FTW + + V ++LDR V + + A V L +SDH
Sbjct: 67 NELSLIDLGFKGNKFTWRRGRQESTVVAKRLDRVFVCAHARLKWQEAVVSHLPFMASDHA 126
Query: 579 PLWLTCKPVTAVNRNPHRFKFENAWLAEPDFKQQVQQRWKLYPEEGITQKLSYCAEDLTD 638
PL++ +P+ +Q+ ++W E D
Sbjct: 127 PLYVQLEPL----------------------QQRKLRKWN--------------REVFGD 150
Query: 639 WSRNNNNFRRDISKVQKKIEKLRTHVTAANVSYFNSLKNKLDKLLVQDDLFWKQRAKTFW 698
DI +VQ + + + A L ++D +L Q++ W Q+++ +
Sbjct: 151 IHVRKEKLVADIKEVQDLLGVVLSDDLLAKEEV---LLKEMDLVLEQEETLWFQKSREKY 207
Query: 699 YKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFT--KLSS 756
+ GD NT FFH + RR+ NRIE L+ + + EL+ +A Y+ L++ +S
Sbjct: 208 IELGDRNTTFFHTSTIIRRRRNRIESLKGDDDRWVTDKVELEAMALTYYKRLYSLEDVSE 267
Query: 757 TRADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWNMC 816
R + + SIS+ + L AFT E +A SM K PGPDG+ P FYQ W
Sbjct: 268 VRNMLPTGGFASISEAEKAALLQAFTKAEVVSAVKSMGRFKAPGPDGYQPVFYQQCWETV 327
Query: 817 GSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVLAN 876
G + + E+ E GV P N + LI K ++ +RP++LCNV++K++ K++
Sbjct: 328 GPSVTRFVLEFFETGVLPASTNDALLVLIAKVAKPERIQQFRPVSLCNVLFKIITKMMVT 387
Query: 877 RLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAYDR 936
RLKNV+ K I +Q++F+PGR +DN ++ E +H M+ K KG +G + LKLD+ KAYDR
Sbjct: 388 RLKNVISKLIGPAQASFIPGRLSIDNIVLVQEAVHSMRRK-KGRKGWMLLKLDLEKAYDR 446
Query: 937 LDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSPYL 996
+ W++L++ + SE W IM V +VL NG + +P RG+RQGDPLSPYL
Sbjct: 447 VRWDFLQETLEAAGLSEGWTSRIMAGVTDPSMSVLWNGERTDSFVPARGLRQGDPLSPYL 506
Query: 997 FILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMKNIL 1056
F+LC E L LI + + + +SH+ FADD LF AS + +++ +L
Sbjct: 507 FVLCLERLCHLIEASVGKREWKPIAVSCGGSKLSHVCFADDLILFAEASVAQIRIIRRVL 566
Query: 1057 TTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSKKA 1116
+ ASGQ ++L+KS+++ S N E + I+ G+ GKYLG+P + R K
Sbjct: 567 ERFCEASGQKVSLEKSKIFFSHNVSREMEQLISEESGIGCTKELGKYLGMPILQKRMNKE 626
Query: 1117 TFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLN 1176
TF V +R+ R+ W R LS AGR L K+VL SIP +VMS LLP + + +++
Sbjct: 627 TFGEVLERVSARLAGWKGRSLSLAGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSR 686
Query: 1177 AFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLIT 1236
F WG ++ + H LSW ++ PK GG+G +S R N A++ K W+L+ + +SL
Sbjct: 687 TFLWG-STMEKKKQHLLSWRKICKPKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWA 745
Query: 1237 KLLKAKYFPHSDYFSASIGHNP--SYVWRSL-WSVRDYLKHGLKWSIGTGETISVWNQPW 1293
++++ KY ++ + P S WRS+ +R+ + G+ W G G TI W W
Sbjct: 746 RVVRKKYKVGGVQDTSWLKPQPRWSSTWRSVAVGLREVVVKGVGWVPGDGCTIRFWLDRW 805
Query: 1294 -LKDPLCLQPVTEVQIMWDALTVGHLFKPNTKEWNENF-----IRYVFNAETSNQILQTP 1347
L++PL V++ D + G K W I ++ ET + L +
Sbjct: 806 LLQEPL-------VELGTDMIPEGERIKVAADYWLPGSGWNLEILGLYLPETVKRRLLSV 858
Query: 1348 LLQSV--QVDKATWRFEKNGLYSVRSAYREIINRNDVLLQHRVPGKWNIIWNLKLPPKIK 1405
++Q D+ +W+ ++G ++VRSAY + + DV + + +N IW L P +++
Sbjct: 859 VVQVFLGNGDEISWKGTQDGAFTVRSAYS--LLQGDVGDRPNMGSFFNRIWKLITPERVR 916
Query: 1406 NFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCWQRLGFWPS 1465
F+W V +N + T + + + + C++CN EE H+ C W+RL
Sbjct: 917 VFIWLVSQNVIMTNVERVRRHLSENAICSVCNGAEETILHVLRDCPAMEPIWRRLLPLRR 976
Query: 1466 IQQIWSHNAFCADIIFSLLQQLDIAHQQIFAVTLWSLWRHRNNKVWNNIVETTEEIGDRA 1525
+ +S + + +F+ + + +F + +W W+ R V+ +I
Sbjct: 977 HHEFFSQSLL--EWLFTNMDPVKGIWPTLFGMGIWWAWKWRCCDVFGE-----RKICRDR 1029
Query: 1526 VAFLNSWKAAQETR------IRSSPANPHFD-ISKWSKPSVGRFKCNVDAAFSASLHRVG 1578
+ F+ A+E R + + P + + +W PS G K D A +
Sbjct: 1030 LKFIKD--MAEEVRRVHVGAVGNRPNGVRVERMIRWQVPSDGWVKITTDGASRGNHGLAA 1087
Query: 1579 FGACIRDAN----GNHVISRTECFTPLLDVEMGEAIGLLHAMRWAKDLNLVNMDFETDSK 1634
G IR+ G ++ C PL ++ G GLL A W K V +D D K
Sbjct: 1088 AGGAIRNGQGEWLGGFALNIGSCAAPLAEL-WGAYYGLLIA--WDKGFRRVELDL--DCK 1142
Query: 1635 VVVENIYKG-DGVSDFMAIIHDCRHLLMTDLANSDVKFIRRQANSAAHNLAREA 1687
+VV + G ++ C+ D V + R+AN A LA A
Sbjct: 1143 LVVGFLSTGVSNAHPLSFLVRLCQGFFTRDWL-VRVSHVYREANRLADGLANYA 1195
>At1g25430 hypothetical protein
Length = 1213
Score = 434 bits (1116), Expect = e-121
Identities = 344/1200 (28%), Positives = 544/1200 (44%), Gaps = 75/1200 (6%)
Query: 359 WNCRGLGSPSTVPTLKYLVRTYKPEGIFLSETMAALNKIEELKYI------LSFDSCFTV 412
WN RG + S K V+ KP IF + + ++ K+I SF +
Sbjct: 8 WNIRGFNNVSHRSGFKKWVKANKP--IFGGVIETHVKQPKDRKFINALLPGWSFVENYAF 65
Query: 413 DRIGRGGGLAFLWKNSANCTITNFSQNHIDVEVDDLLIGK--WRLTGF-YGMPENGRRKE 469
+G+ + +W S + S I EV LL G W + Y E RKE
Sbjct: 66 SDLGK---IWVMWDPSVQVVVVAKSLQMITCEV--LLPGSPSWIIVSVVYAANEVASRKE 120
Query: 470 SWAFLKNLARTSSL---PWCVIGDFNDILSSEEKKGR-SERAPWLIRGFRQAVLDAGLFD 525
W + N+ + + PW V+GDFN +L+ +E S +R FR +L A L D
Sbjct: 121 LWIEIVNMVVSGIIGDRPWLVLGDFNQVLNPQEHSNPVSLNVDINMRDFRDCLLAAELSD 180
Query: 526 LHMTGYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLWLTCK 585
L G FTW+ T V +K+DR LVN W +FP++ S SDH + +
Sbjct: 181 LRYKGNTFTWWNKSHTT-PVAKKIDRILVNDSWNALFPSSLGIFGSLDFSDHVSCGVVLE 239
Query: 586 PVTAVNRNPHRFKFENAWLAEPDFKQQVQQRWKLYPEEG-----ITQKLSYCAEDLTDWS 640
+ + P FKF N L DF V+ W G +++KL + + D+S
Sbjct: 240 ETSIKAKRP--FKFFNYLLKNLDFLNLVRDNWFTLNVVGSSMFRVSKKLKALKKPIKDFS 297
Query: 641 RNNNNFRRDISKVQKKI--------EKLRTHVTAANVSYFNSLKNKLDKLLVQDDLFWKQ 692
R N + ++ K K+ ++ T N S+ + K L ++ F++Q
Sbjct: 298 RLNYS---ELEKRTKEAHDFLIGCQDRTLADPTPINASFELEAERKWHILTAAEESFFRQ 354
Query: 693 RAKTFWYKEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLF- 751
+++ W+ EGD NTK+FH A +R N I L + NG + ++ + ++ +YF L
Sbjct: 355 KSRISWFAEGDGNTKYFHRMADARNSSNSISALYDGNGKLVDSQEGILDLCASYFGSLLG 414
Query: 752 ---TKLSSTRADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGF 808
+ D+ ++ S C L + F+ E+ + A FS+ +K GPDGF F
Sbjct: 415 DEVDPYLMEQNDMNLLLSYRCSPAQVCELESTFSNEDIRAALFSLPRNKSCGPDGFTAEF 474
Query: 809 YQNFWNMCGSEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYK 868
+ + W++ G+E+ A E+ +G N+T I LIPK T D+RPI+ N +YK
Sbjct: 475 FIDSWSIVGAEVTDAIKEFFSSGCLLKQWNATTIVLIPKIVNPTCTSDFRPISCLNTLYK 534
Query: 869 MVAKVLANRLKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKL 928
++A++L +RL+ +L IS++QSAF+PGRS+ +N L+A +L+H +G LK+
Sbjct: 535 VIARLLTDRLQRLLSGVISSAQSAFLPGRSLAENVLLATDLVHGYNWSNISPRG--MLKV 592
Query: 929 DISKAYDRLDWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQ 988
D+ KA+D + WE++ + + EK+I WI C+ T +TV +NG G +G+RQ
Sbjct: 593 DLKKAFDSVRWEFVIAALRALAIPEKFINWISQCISTPTFTVSINGGNGGFFKSTKGLRQ 652
Query: 989 GDPLSPYLFILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQE 1048
GDPLSPYLF+L E S L+ G+I S +ISHL+FADD +FF
Sbjct: 653 GDPLSPYLFVLAMEAFSNLLHSRYESGLI-HYHPKASNLSISHLMFADDVMIFFDGGSFS 711
Query: 1049 ASVMKNILTTYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPS 1108
+ L + + SG +N KS +Y + E A + + +YLGLP
Sbjct: 712 LHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNANAAYGFPIGTL--PIRYLGLPL 769
Query: 1109 MIGRSKKATFKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFI 1168
M + + A ++ + ++I R SW ++CLS AGR LI SV+ ++ MS FLLP I
Sbjct: 770 MNRKLRIAEYEPLLEKITARFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCI 829
Query: 1169 GEIEKMLNAFWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLI 1228
IE + + F W N ++G+ +SW L +PK+ GG+G + L +N + + W+L
Sbjct: 830 KRIESLCSRFLWSGNIEQAKGIK-VSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLF 888
Query: 1229 SNPDSLITKLLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETISV 1288
DSL + +++ G + S+ W+ L S+R L +G G
Sbjct: 889 VAKDSLWADWQHLHHLSRGSFWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNGLKADY 948
Query: 1289 WNQPWLKDPLCLQPVTEV--QIMWDALTVGHLFKP----NTKEWNENFIRYVFNAETSNQ 1342
W W L P+ + I +L V L K + W R +
Sbjct: 949 WYDNWTS----LGPLFRIIGDIGPSSLRVPLLAKVASAFSEDGWRLPVSRSAPAKGIHDH 1004
Query: 1343 ILQTPLLQSVQVDKATWRFEKNGL----YSVRSAYREIINRNDVLLQHRVPGKW-NIIWN 1397
+ P+ + Q D + + NG +S + I + V W + IW
Sbjct: 1005 LCTVPVPSTAQEDVDRYEWSVNGFLCQGFSAAKTWEAIRPKATV-------KSWASSIWF 1057
Query: 1398 LKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNHEEDGKHLFFACSKSVGCW 1457
PK +W N L TR RL S G C +C+ E HL C S W
Sbjct: 1058 KGAVPKYAFNMWVSHLNRLLTRQRLASWGHIQSDACVLCSFASESRDHLLLICEFSAQVW 1117
Query: 1458 QRLGF---WPSIQQIWSHNAFCADIIFSLLQQLDIAHQQIFAVTLWSLWRHRNNKVWNNI 1514
RL F P + S + + + S + + + + V +++LWR RNN + N++
Sbjct: 1118 -RLVFRRICPRQRLFSSWSELLSWVRQSSPEAPPLLRKIVSQVVVYNLWRQRNNLLHNSL 1176
>At2g17610 putative non-LTR retroelement reverse transcriptase
Length = 773
Score = 411 bits (1057), Expect = e-114
Identities = 226/643 (35%), Positives = 340/643 (52%), Gaps = 12/643 (1%)
Query: 899 ILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAYDRLDWEYLRDIMIQMRFSEKWIRW 958
I DN L+A ELIH + K K Q VA KLDI+KA+D+++W ++ IM QM FSEKW W
Sbjct: 2 ITDNILIAHELIHSLHTK-KLVQPFVATKLDITKAFDKIEWGFIEAIMKQMGFSEKWCNW 60
Query: 959 IMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSPYLFILCAEGLSALIRDAERRGVIT 1018
IM C+ T Y++L+NG V +IP RGIRQGDP+SPYL++LC EGLSALI+ + + +
Sbjct: 61 IMTCITTTTYSILINGQPVRRIIPKRGIRQGDPISPYLYLLCTEGLSALIQASIKAKQLH 120
Query: 1019 GTRICTSAPAISHLLFADDCFLFFRASEQEASVMKNILTTYEAASGQAINLQKSEMYCSR 1078
G + + PAISHLLFA D +F +A+ +E + N+L YE ASGQA+N QKS + +
Sbjct: 121 GFKASRNGPAISHLLFAHDSLVFCKATLEECMTLVNVLKLYEKASGQAVNFQKSAILFGK 180
Query: 1079 NTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSKKATFKFVKDRIWNRINSWSSRCLS 1138
+++ LG+ + G G+YLGLP +GR+K F F+ + ++++W ++ LS
Sbjct: 181 GLDFRTSEQLSQLLGIYKTEGFGRYLGLPEFVGRNKTNAFSFIAQTMDQKMDNWYNKLLS 240
Query: 1139 QAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNAFWWGHNSANSRGMHWLSWERL 1198
AG+E+LIKS++ +IP+Y MS FLLP I +I + FWW + + + W++W +L
Sbjct: 241 PAGKEVLIKSIVTAIPTYSMSCFLLPMRLIHQITSAMRWFWWSNTKVKHK-IPWVAWSKL 299
Query: 1199 SVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITKLLKAKYFPHSDYFSASIGHNP 1258
+ PK GG+ + L+ FN+A++ KQ+W+++ P SL+ ++ KAKYFP A
Sbjct: 300 NDPKKMGGLAIRDLKDFNIALLAKQSWRILQQPFSLMARVFKAKYFPKERLLDAKATSQS 359
Query: 1259 SYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQPWLKDPLCLQPVTEVQIMWDALTVGHL 1318
SY W+S+ + GLK+ G G I +W WL PV ++ L V L
Sbjct: 360 SYAWKSILHGTKLISRGLKYIAGNGNNIQLWKDNWLPLNPPRPPVGTCDSIYSQLKVSDL 419
Query: 1319 FKPNTKEWNENFIRYVFNAETSNQILQTPLLQSVQVDKATWRFEKNGLYSVRSAY---RE 1375
WNE+ + + + I + D TW + +G YSV+S Y R+
Sbjct: 420 LIEG--RWNEDLLCKLIHQNDIPHIRAIRPSITGANDAITWIYTHDGNYSVKSGYHLLRK 477
Query: 1376 IINRNDVLL----QHRVPGKWNIIWNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPP 1431
+ + L + + IW PPKIK+F WR N LPT L + +
Sbjct: 478 LSQQQHASLPSPNEVSAQTVFTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDD 537
Query: 1432 TCAICNNHEEDGKHLFFACSKSVGCWQRLGFWPSIQQIWSHNAFCADI-IFSLLQQLDIA 1490
TC C ED HL F C S W++ N+F ++ L Q
Sbjct: 538 TCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSLMSNSFNQNLESIQKLNQSARK 597
Query: 1491 HQQIFAVTLWSLWRHRNNKVWNNIVETTEEIGDRAVAFLNSWK 1533
+F W +W+ RN+ ++NN + + +A+ WK
Sbjct: 598 DVSLFPFIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQQQWK 640
>At4g15590 reverse transcriptase like protein
Length = 929
Score = 409 bits (1052), Expect = e-114
Identities = 283/944 (29%), Positives = 452/944 (46%), Gaps = 114/944 (12%)
Query: 530 GYAFTWFKSLGTARAVEEKLDRALVNSDWCNMFPNAGVECLSTTSSDHYPLWLTCKPVTA 589
G FTW + L + V ++LDR L + + A L C P
Sbjct: 5 GNRFTWRRGLVESTFVAKRLDRVLFCAHARLKWQEA----------------LLC-PAQN 47
Query: 590 VNRNPHRFKFENAWLAEPDFKQQVQQRWKLYPEEGITQK--LSYCAEDLTDWSRN---NN 644
V+ F+FE AWL+ FK+ + W + G++ L+ L W++ N
Sbjct: 48 VDARRRPFRFEAAWLSHEGFKELLTASW----DTGLSTPVALNRLRWQLKKWNKEVFGNI 103
Query: 645 NFRR-----DISKVQKKIEKLRTHVTAANVSYFNSLKNKLDKLLVQDDLFWKQRAKTFWY 699
+ R+ D+ VQ +E ++T ++L + D LL Q++ W Q+++
Sbjct: 104 HVRKEKVVSDLKAVQDLLEVVQTDDLLMKE---DTLLKEFDVLLHQEETLWFQKSREKLL 160
Query: 700 KEGDLNTKFFHAAATSRRKVNRIEHLENSNGTVCRKEDELQNIARNYFSHLFT--KLSST 757
GD NT FFH + RR+ NRIE L++S +++ L+ +A +Y+ L++ +S
Sbjct: 161 ALGDRNTTFFHTSTVIRRRRNRIEMLKDSEDRWVTEKEALEKLAMDYYRKLYSLEDVSVV 220
Query: 758 RADVISKVATSISDDDNCFLTAAFTLEEFKTAAFSMQADKCPGPDGFNPGFYQNFWNMCG 817
R + ++ ++ ++ L FT +E A SM K PGPDG+ P FYQ W G
Sbjct: 221 RGTLPTEGFPRLTREEKNNLNRPFTRDEVVVAVRSMGRFKAPGPDGYQPVFYQQCWETVG 280
Query: 818 SEIHKAGCEWLENGVFPPHLNSTNIALIPKGDAQTTMKDWRPIALCNVVYKMVAKVLANR 877
+ K E+ E+GV P N + L+ K + +RP++LCNV++K++ K++ R
Sbjct: 281 ESVSKFVMEFFESGVLPKSTNDVLLVLLAKVAKPERITQFRPVSLCNVLFKIITKMMVIR 340
Query: 878 LKNVLDKCISTSQSAFVPGRSILDNALVAIELIHYMKAKTKGSQGDVALKLDISKAYDRL 937
LKNV+ K I +Q++F+PGR DN +V E +H M+ K KG +G + LKLD+ KAYDR+
Sbjct: 341 LKNVISKLIGPAQASFIPGRLSFDNIVVVQEAVHSMRRK-KGRKGWMLLKLDLEKAYDRI 399
Query: 938 DWEYLRDIMIQMRFSEKWIRWIMLCVETVDYTVLVNGVQVGPLIPGRGIRQGDPLSPYLF 997
W++L + + SE WI+ IM CV + ++L NG + P RG+RQGDP+SPYLF
Sbjct: 400 RWDFLAETLEAAGLSEGWIKRIMECVAGPEMSLLWNGEKTDSFTPERGLRQGDPISPYLF 459
Query: 998 ILCAEGLSALIRDAERRGVITGTRICTSAPAISHLLFADDCFLFFRASEQEASVMKNILT 1057
+LC E L I A RG I P +SH+ FADD LF
Sbjct: 460 VLCIERLCHQIETAVGRGDWKSISISQGGPKVSHVCFADDLILF---------------- 503
Query: 1058 TYEAASGQAINLQKSEMYCSRNTPTECQNRIATTLGVKQVLGTGKYLGLPSMIGRSKKAT 1117
EA+ Q ++L+KS+++ S N + + I G+ GKYLG+P + R K T
Sbjct: 504 -AEASVAQKVSLEKSKIFFSNNVSRDLEGLITAETGIGSTRELGKYLGMPVLQKRINKDT 562
Query: 1118 FKFVKDRIWNRINSWSSRCLSQAGREILIKSVLQSIPSYVMSIFLLPSTFIGEIEKMLNA 1177
F V +R+ +R++ W SR LS AGR L K+VL SIP + MS LLP++ + +++K+
Sbjct: 563 FGEVLERVSSRLSGWKSRSLSLAGRITLTKAVLMSIPIHTMSSILLPASLLEQLDKVSRN 622
Query: 1178 FWWGHNSANSRGMHWLSWERLSVPKTFGGMGFKSLRAFNLAMIGKQAWKLISNPDSLITK 1237
F WG ++ R H LSW+++ PK GG+G ++ + N A++ K W+L+++ SL +
Sbjct: 623 FLWG-STVEKRKQHLLSWKKVCRPKAAGGLGLRASKDMNRALLAKVGWRLLNDKVSLWAR 681
Query: 1238 LLKAKYFPHSDYFSASIGHNPSYVWRSLWSVRDYLKHGLKWSIGTGETISVWNQPWLKDP 1297
+L+ KY + S+ + P W S W SIG G V L +P
Sbjct: 682 VLRRKYKVTDVHDSSWL--VPKATWSSTWR-----------SIGVGLREGVAKGWILHEP 728
Query: 1298 LCLQPVTEVQ---------------IMWDALTVGH-LFKPNTKEWNENFIRYVFNAETSN 1341
LC + + + WD + +G L + T + I+ V
Sbjct: 729 LCTRATCLLSPEELNARVEEFWTEGVGWDMVKLGQCLPRSVTDRLHAVVIKGVLGLR--- 785
Query: 1342 QILQTPLLQSVQVDKATWRFEKNGLYSVRSAYREIINRNDVLLQHRVPGK------WNII 1395
D+ +W+ +G ++V SAY VLL K + I
Sbjct: 786 -------------DRISWQGTSDGDFTVGSAY--------VLLTQEEESKPCMESFFKRI 824
Query: 1396 WNLKLPPKIKNFLWRVCRNCLPTRMRLISKGVQCPPTCAICNNH 1439
W + P +++ FLW V + + T + + + + C +H
Sbjct: 825 WGVIAPERVRVFLWLVGQQVIMTNVERVRRHIGDIEVCQRLPSH 868
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.333 0.142 0.482
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,620,225
Number of Sequences: 26719
Number of extensions: 1645431
Number of successful extensions: 6418
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 5718
Number of HSP's gapped (non-prelim): 270
length of query: 1711
length of database: 11,318,596
effective HSP length: 113
effective length of query: 1598
effective length of database: 8,299,349
effective search space: 13262359702
effective search space used: 13262359702
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 67 (30.4 bits)
Medicago: description of AC146755.8