BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146752.15 + phase: 0 /pseudo
         (178 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g35530 unknown protein                                             113  6e-26
At1g77220 unknown protei                                               32  0.18
At3g30420 hypothetical protein                                         29  1.5
At1g54430 hypothetical protein                                         29  1.5
At1g17640 RNA-binding protein, putative                                28  3.4
At3g28330 hypothetical protein                                         27  5.8
At5g51710 potassium/proton antiporter-like protein                     27  7.6
At3g30560 hypothetical protein                                         27  7.6
At2g14300 pseudogene; similar to  MURA transposase of maize Muta...    27  7.6
At1g72270 hypothetical protein                                         27  7.6

>At4g35530 unknown protein
          Length = 195

 Score =  113 bits (282), Expect = 6e-26
 Identities = 69/181 (38%), Positives = 103/181 (56%), Gaps = 16/181 (8%)

Query: 5   RYNYVHDQ--KYPSEDVDIHHIVLRSNGGKYF---FVYASALIVLACGIYLYLLEEKSIS 59
           RY Y+H+   K   E +DIHH+++  + G  +   +     L+ LA  +Y  L ++    
Sbjct: 10  RYTYIHESGSKSTREAIDIHHVIINGSSGTGYARRWGLGFFLVFLASSMYFLLGKDNPAR 69

Query: 60  LVYYSLLFDIFLVKLLLRLPVIKVLKLILVILTKLSFSCRVCCDYASFWSTA*----DSL 115
            + +  L   FLV L  R  V K   +IL      +F  ++   Y S  + +     D +
Sbjct: 70  TLSWGCLLSGFLVMLHSRKFVKKESVIILP-----TFGIQLETQYLSGKTVSRFIPIDKI 124

Query: 116 YEPVLLECVTPVTCYWTLSLIVREESEMVLVYKNLRPPVKMLVHVWKALCAA--TDNKGE 173
            +PVL+ECVTP+TCYW+LSL +R E ++ LV+K LRPP+KMLV +WKALCAA  TD++ E
Sbjct: 125 LKPVLVECVTPITCYWSLSLFLRGEEQLTLVFKELRPPLKMLVPIWKALCAAIGTDHQSE 184

Query: 174 T 174
           T
Sbjct: 185 T 185


>At1g77220 unknown protei
          Length = 484

 Score = 32.0 bits (71), Expect = 0.18
 Identities = 26/89 (29%), Positives = 45/89 (50%), Gaps = 6/89 (6%)

Query: 23  HIVLRSNGGKYF---FVYASALIVLACGIYLYLLEEKSISLVYYSLLFDIFLVKLLLRLP 79
           H  L  + G+Y     + AS  +V+A  + +YL+ E   S  Y       FL+ L+L +P
Sbjct: 28  HPNLGVDSGQYLTWPILSASVFVVIAILLPMYLIFEHLAS--YNQPEEQKFLIGLILMVP 85

Query: 80  VIKVLKLILVILTKLSFSCRVCCD-YASF 107
           V  V   + ++ ++ +F+C V  D Y +F
Sbjct: 86  VYAVESFLSLVNSEAAFNCEVIRDCYEAF 114


>At3g30420 hypothetical protein
          Length = 837

 Score = 28.9 bits (63), Expect = 1.5
 Identities = 9/34 (26%), Positives = 21/34 (61%)

Query: 131 WTLSLIVREESEMVLVYKNLRPPVKMLVHVWKAL 164
           W+ S ++R    ++L+Y  +  P+K+  H W+++
Sbjct: 229 WSTSYLLRSLFVLILIYCEVSEPLKLWSHCWESM 262


>At1g54430 hypothetical protein
          Length = 1639

 Score = 28.9 bits (63), Expect = 1.5
 Identities = 9/34 (26%), Positives = 21/34 (61%)

Query: 131  WTLSLIVREESEMVLVYKNLRPPVKMLVHVWKAL 164
            W+ S ++R    ++L+Y  +  P+K+  H W+++
Sbjct: 1062 WSTSYLLRSLFVLILIYCEVSEPLKLWSHCWESM 1095


>At1g17640 RNA-binding protein, putative
          Length = 369

 Score = 27.7 bits (60), Expect = 3.4
 Identities = 10/29 (34%), Positives = 18/29 (61%)

Query: 3  DTRYNYVHDQKYPSEDVDIHHIVLRSNGG 31
          D+ +++VHD++ P  D ++     R NGG
Sbjct: 11 DSYHHHVHDEQLPQSDFEVETFDDRRNGG 39


>At3g28330 hypothetical protein
          Length = 349

 Score = 26.9 bits (58), Expect = 5.8
 Identities = 16/49 (32%), Positives = 25/49 (50%), Gaps = 7/49 (14%)

Query: 118 PVLLECVT-----PVTCYWTLSLIVREESEMVLVYK--NLRPPVKMLVH 159
           PV  +CV       + C+W L +  R E+ +VL YK   L+P    L++
Sbjct: 87  PVSRQCVEILPSQKLDCFWILGIATRVENGVVLGYKVVLLKPNFTFLIY 135


>At5g51710 potassium/proton antiporter-like protein
          Length = 568

 Score = 26.6 bits (57), Expect = 7.6
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 19  VDIHHIVLRSNGGKYFFVY---ASALIVLACGIYLYLLEEKSISLVYYSLLFDI 69
           +  H  VL +  G++ FV    AS L V+   +YL LL   ++SLV   LLF +
Sbjct: 476 ISFHVGVLLAQIGEFAFVLLSRASNLHVIEGKMYLLLLGTTALSLVTTPLLFKL 529


>At3g30560 hypothetical protein
          Length = 1473

 Score = 26.6 bits (57), Expect = 7.6
 Identities = 10/35 (28%), Positives = 19/35 (53%)

Query: 130 YWTLSLIVREESEMVLVYKNLRPPVKMLVHVWKAL 164
           +W     VR+   ++L++++L  P  +  H WK L
Sbjct: 920 FWCFHKYVRKLFVIMLIFESLSSPAVVWEHTWKIL 954


>At2g14300 pseudogene; similar to  MURA transposase of maize Mutator
           transposon
          Length = 1230

 Score = 26.6 bits (57), Expect = 7.6
 Identities = 11/35 (31%), Positives = 19/35 (53%)

Query: 130 YWTLSLIVREESEMVLVYKNLRPPVKMLVHVWKAL 164
           +W     VR+   ++L+ ++L  PV +  H WK L
Sbjct: 727 FWCSPKYVRKSFVIMLISESLSSPVVVWEHTWKIL 761


>At1g72270 hypothetical protein
          Length = 2777

 Score = 26.6 bits (57), Expect = 7.6
 Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 14/74 (18%)

Query: 48   IYLYLLEEKSISLVYYSLLFDIFLVKL------------LLRLPVIKVLKLILVILTKLS 95
            I  YL+E   + L  +  +F   L KL            ++ LP   VL  +  +  KL 
Sbjct: 1668 ILFYLVESSPLHLSVFGHIFFSMLSKLQGDSALITDDQFVMLLP--PVLLFLASVFAKLE 1725

Query: 96   FSCRVCCDYASFWS 109
             SC  C D  S +S
Sbjct: 1726 KSCSKCLDITSLYS 1739


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.331    0.144    0.456 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,015,007
Number of Sequences: 26719
Number of extensions: 149159
Number of successful extensions: 372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 363
Number of HSP's gapped (non-prelim): 11
length of query: 178
length of database: 11,318,596
effective HSP length: 93
effective length of query: 85
effective length of database: 8,833,729
effective search space: 750866965
effective search space used: 750866965
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 56 (26.2 bits)