BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146749.13 - phase: 0 /pseudo
         (68 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g14860 unknown protein                                              37  0.002
At5g55530 unknown protein                                              30  0.29
At5g01310 putative protein                                             27  1.9
At5g18420 unknown protein                                              27  2.5
At4g27570 UDP rhamnose--anthocyanidin-3-glucoside rhamnosyltrans...    27  2.5
At4g27560 UDP rhamnose-anthocyanidin-3-glucoside rhamnosyltransf...    26  3.2
At1g47910 reverse transcriptase, putative                              25  9.3
At1g02230 hypothetical protein                                         25  9.3

>At3g14860 unknown protein
          Length = 493

 Score = 37.0 bits (84), Expect = 0.002
 Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 3/37 (8%)

Query: 26  TKEETGWPSFRQVV-DLLKLSLEEFTSSIL--KFMSN 59
           TKEE GWPSF Q++ DL KL+LE  TS ++  +F +N
Sbjct: 308 TKEEPGWPSFGQLLTDLCKLALEFITSHLVPARFQTN 344


>At5g55530 unknown protein
          Length = 405

 Score = 29.6 bits (65), Expect = 0.29
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 1/53 (1%)

Query: 4   QPSERDFKGEASSDKSKSTLERTKEETGWPSFRQ-VVDLLKLSLEEFTSSILK 55
           Q SE +  GE S +K+  ++   K E      +Q +VD+   S+++FT S+ K
Sbjct: 311 QESESEASGETSEEKTVKSVLTVKVEPESKVVQQDIVDMYMKSMQQFTDSLAK 363


>At5g01310 putative protein
          Length = 912

 Score = 26.9 bits (58), Expect = 1.9
 Identities = 16/75 (21%), Positives = 37/75 (49%), Gaps = 11/75 (14%)

Query: 2   LQQPSERDFKGEASSDKS------KSTLERT-----KEETGWPSFRQVVDLLKLSLEEFT 50
           +++ SER+ K + S DK+        +LE T     K   GW ++   +  + +  E   
Sbjct: 672 IKEDSERNKKYKGSQDKAVTNNLESESLEDTRGSGKKMSKGWNTWALALHSIAMHPERHE 731

Query: 51  SSILKFMSNLIALGE 65
           + +L+++ N++ + +
Sbjct: 732 NVVLEYLDNIVVIND 746


>At5g18420 unknown protein
          Length = 441

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 19/68 (27%), Positives = 29/68 (41%), Gaps = 5/68 (7%)

Query: 3   QQPSERDFKGEASSDKSKSTLERTKEE-----TGWPSFRQVVDLLKLSLEEFTSSILKFM 57
           Q+PS   F  E  S      LE+++         W S+  V ++LKLS  ++  S     
Sbjct: 80  QKPSFNPFLSEMISAACNEQLEKSERAFLLHLLQWNSYNNVKEILKLSAVDYIRSFDPST 139

Query: 58  SNLIALGE 65
            +   LGE
Sbjct: 140 HDFPELGE 147


>At4g27570 UDP rhamnose--anthocyanidin-3-glucoside
           rhamnosyltransferase - like protein
          Length = 453

 Score = 26.6 bits (57), Expect = 2.5
 Identities = 19/53 (35%), Positives = 28/53 (51%), Gaps = 8/53 (15%)

Query: 16  SDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSNLIALGEASH 68
           SD+ K ++E  +EETGW S        K SL +  +S++K  S L  L   +H
Sbjct: 375 SDELKVSVEVAREETGWFS--------KESLCDAVNSVMKRDSELGNLVRKNH 419


>At4g27560 UDP rhamnose-anthocyanidin-3-glucoside
           rhamnosyltransferase - like protein
          Length = 455

 Score = 26.2 bits (56), Expect = 3.2
 Identities = 18/53 (33%), Positives = 29/53 (53%), Gaps = 8/53 (15%)

Query: 16  SDKSKSTLERTKEETGWPSFRQVVDLLKLSLEEFTSSILKFMSNLIALGEASH 68
           SD+ K ++E  +EETGW S        K SL +  +S++K  S +  L + +H
Sbjct: 375 SDELKVSVEVAREETGWFS--------KESLFDAINSVMKRDSEIGNLVKKNH 419


>At1g47910 reverse transcriptase, putative
          Length = 1142

 Score = 24.6 bits (52), Expect = 9.3
 Identities = 11/29 (37%), Positives = 17/29 (57%)

Query: 30   TGWPSFRQVVDLLKLSLEEFTSSILKFMS 58
            T WP+F   ++ L+   EEFT+  L  +S
Sbjct: 1081 TEWPAFSVYLEELQSDREEFTNFSLSLIS 1109


>At1g02230 hypothetical protein
          Length = 192

 Score = 24.6 bits (52), Expect = 9.3
 Identities = 11/29 (37%), Positives = 17/29 (57%)

Query: 30  TGWPSFRQVVDLLKLSLEEFTSSILKFMS 58
           T WP+F   ++ L+   EEFT+  L  +S
Sbjct: 131 TEWPAFSVYLEELQSDREEFTNFSLSLIS 159


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.310    0.126    0.333 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,283,833
Number of Sequences: 26719
Number of extensions: 38669
Number of successful extensions: 118
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 112
Number of HSP's gapped (non-prelim): 9
length of query: 68
length of database: 11,318,596
effective HSP length: 44
effective length of query: 24
effective length of database: 10,142,960
effective search space: 243431040
effective search space used: 243431040
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 52 (24.6 bits)