BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146722.7 + phase: 1 /pseudo/partial
(293 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g11300 cyclin 3b 270 9e-73
At1g80370 putative cyclin 270 9e-73
At5g25380 cyclin 3a 262 1e-70
At1g15570 putative cyclin (At1g15570) 260 5e-70
At1g44110 mitotic cyclin a2-type, putative 216 9e-57
At1g47210 cyclin like protein 215 2e-56
At5g43080 cyclin A-type 213 7e-56
At1g47220 cyclin, putative 201 5e-52
At1g47230 cyclin like protein 199 1e-51
At1g77390 142 3e-34
At1g76310 putative G2/mitotic-specific cyclin 1 (B-like cyclin) 134 6e-32
At1g20610 hypothetical protein 130 1e-30
At2g17620 putative cyclin 2 129 2e-30
At4g35620 cyclin 2b protein 125 2e-29
At5g06150 mitosis-specific cyclin 1b 118 3e-27
At4g37490 cyclin cyc1 118 4e-27
At2g26760 putative cyclin 115 2e-26
At3g11520 cyclin box 112 3e-25
At1g16330 putative mitotic cyclin 112 3e-25
At1g20590 hypothetical protein 103 1e-22
>At5g11300 cyclin 3b
Length = 434
Score = 270 bits (689), Expect = 9e-73
Identities = 144/270 (53%), Positives = 185/270 (68%), Gaps = 7/270 (2%)
Query: 14 LGIVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWL 73
L +VDIDS + D + YA DIY NIHV E ++RPLANYME +Q+DI P MR IL+DWL
Sbjct: 154 LQVVDIDSNVEDPQCCSLYAADIYDNIHVAELQQRPLANYMELVQRDIDPDMRKILIDWL 213
Query: 74 VEVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVE 130
VEV+D++KLVP T+ + S + V+ + + YEE+ APGVE
Sbjct: 214 VEVSDDYKLVPDTLYLTVNLIDRFLSNSYIERQRLQLLGVSCMLIASK--YEELSAPGVE 271
Query: 131 DFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFL 190
+FC IT NTY+R EVL ME ++LN +HF+L+VPT KTFL + +V +LE+L
Sbjct: 272 EFCFITANTYTRPEVLSMEIQILNFVHFRLSVPTTKTFLSALFLIIIL--QVPFIELEYL 329
Query: 191 ANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTV 250
ANYLAEL LVEYSFL+F PS IAAS+V LARWTL+Q++HPWNPTL+HYT Y+ +ELK TV
Sbjct: 330 ANYLAELTLVEYSFLRFLPSLIAASAVFLARWTLDQTDHPWNPTLQHYTRYEVAELKNTV 389
Query: 251 LELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
L + DLQLNT C L A REKY K +++
Sbjct: 390 LAMEDLQLNTSGCTLAATREKYNQPKFKSV 419
>At1g80370 putative cyclin
Length = 461
Score = 270 bits (689), Expect = 9e-73
Identities = 144/282 (51%), Positives = 185/282 (65%), Gaps = 35/282 (12%)
Query: 17 VDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEV 76
VDIDS +D + + YAPDIY N+ V E +RRP ++ME Q+D+T MRGILVDWLVEV
Sbjct: 182 VDIDSDDKDPLLCSLYAPDIYYNLRVAELKRRPFPDFMEKTQRDVTETMRGILVDWLVEV 241
Query: 77 ADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---------------- 120
++E+ LVP TL Y T + W+ LH +++
Sbjct: 242 SEEYTLVP-DTL---------------YLTVYLIDWF-LHGNYVERQRLQLLGITCMLIA 284
Query: 121 --YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQT 178
YEEI AP +E+FC ITDNTY+R +VL+ME +VL FQ+ PT KTFLRRF++ AQ
Sbjct: 285 SKYEEIHAPRIEEFCFITDNTYTRDQVLEMESQVLKHFSFQIYTPTSKTFLRRFLRAAQV 344
Query: 179 SSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHY 238
S ++EFLANYL EL L++Y FL+F PS IAAS+V LA+WTLNQS HPWNPTLEHY
Sbjct: 345 SFPNQSLEMEFLANYLTELTLMDYPFLKFLPSIIAASAVFLAKWTLNQSSHPWNPTLEHY 404
Query: 239 TNYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
T YKAS+LK +V L DLQLNTK C LN++R KY+ K +++
Sbjct: 405 TTYKASDLKASVHALQDLQLNTKGCSLNSIRMKYRQDKFKSV 446
>At5g25380 cyclin 3a
Length = 444
Score = 262 bits (670), Expect = 1e-70
Identities = 143/271 (52%), Positives = 183/271 (66%), Gaps = 11/271 (4%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
IVDIDS ++D + YA IY +I+V E E+RP +YM +Q+DI P MRGIL+DWLVE
Sbjct: 164 IVDIDSGVQDPQFCSLYAASIYDSINVAELEQRPSTSYMVQVQRDIDPTMRGILIDWLVE 223
Query: 76 VADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---YEEICAPGV 129
V++E+KLV T+ + F + +Y K + + I YEEI AP +
Sbjct: 224 VSEEYKLVSDTLYLTVNLIDR-----FMSHNYIEKQKLQLLGITCMLIASKYEEISAPRL 278
Query: 130 EDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEF 189
E+FC ITDNTY+R EVL ME +VLN LHF+L+VPT KTFLRRFI+ AQ S KV ++E+
Sbjct: 279 EEFCFITDNTYTRLEVLSMEIKVLNSLHFRLSVPTTKTFLRRFIRAAQASDKVPLIEMEY 338
Query: 190 LANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTT 249
LANY AEL L EY+FL+F PS IAAS+V LARWTL+QS HPWN TL+HYT Y+ S LK T
Sbjct: 339 LANYFAELTLTEYTFLRFLPSLIAASAVFLARWTLDQSNHPWNQTLQHYTRYETSALKNT 398
Query: 250 VLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
VL + +LQLNT L A+ KY QK + +
Sbjct: 399 VLAMEELQLNTSGSTLIAIHTKYNQQKFKRV 429
>At1g15570 putative cyclin (At1g15570)
Length = 450
Score = 260 bits (665), Expect = 5e-70
Identities = 137/282 (48%), Positives = 185/282 (65%), Gaps = 35/282 (12%)
Query: 17 VDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEV 76
VDIDS +D + YAP+I+ N+ V E +RRPL ++ME +Q+D+T MRGILVDWLVEV
Sbjct: 173 VDIDSDDKDPLLCCLYAPEIHYNLRVSELKRRPLPDFMERIQKDVTQSMRGILVDWLVEV 232
Query: 77 ADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---------------- 120
++E+ L TL Y T + W+ LH +++
Sbjct: 233 SEEYTLAS-DTL---------------YLTVYLIDWF-LHGNYVQRQQLQLLGITCMLIA 275
Query: 121 --YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQT 178
YEEI AP +E+FC ITDNTY+R +VL+ME +VL FQ+ PT KTFLRRF++ AQ
Sbjct: 276 SKYEEISAPRIEEFCFITDNTYTRDQVLEMENQVLKHFSFQIYTPTPKTFLRRFLRAAQA 335
Query: 179 SSKVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHY 238
S ++EFLA+YL EL L++Y FL+F PS +AAS+V LA+WT++QS HPWNPTLEHY
Sbjct: 336 SRLSPSLEVEFLASYLTELTLIDYHFLKFLPSVVAASAVFLAKWTMDQSNHPWNPTLEHY 395
Query: 239 TNYKASELKTTVLELIDLQLNTKRCRLNAVREKYQHQKVRNL 280
T YKAS+LK +V L DLQLNTK C L+A+R KY+ +K +++
Sbjct: 396 TTYKASDLKASVHALQDLQLNTKGCPLSAIRMKYRQEKYKSV 437
>At1g44110 mitotic cyclin a2-type, putative
Length = 460
Score = 216 bits (551), Expect = 9e-57
Identities = 118/266 (44%), Positives = 164/266 (61%), Gaps = 5/266 (1%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
IV+IDS D + ++A DIY ++ E ++RP +YME +Q+D+ MRGILVDWL+E
Sbjct: 178 IVNIDSNNGDPQLCATFACDIYKHLRASEAKKRPDVDYMERVQKDVNSSMRGILVDWLIE 237
Query: 76 VADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDF 132
V++E++LVP T+ + + S + VA + A YEEICAP VE+F
Sbjct: 238 VSEEYRLVPETLYLTVNYIDRYLSGNVISRQKLQLLGVACMMIAAK--YEEICAPQVEEF 295
Query: 133 CVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLAN 192
C ITDNTY + EVL ME +VLN L F++ PT K FLRRF++ A + LE +AN
Sbjct: 296 CYITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLRRFVRAAHGVHEAPLMQLECMAN 355
Query: 193 YLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLE 252
Y+AEL+L+EY+ L PS +AAS++ LA++ L+ + PWN TL+HYT YKA EL+ V +
Sbjct: 356 YIAELSLLEYTMLSHSPSLVAASAIFLAKYILDPTRRPWNSTLQHYTQYKAMELRGCVKD 415
Query: 253 LIDLQLNTKRCRLNAVREKYQHQKVR 278
L L L AVREKY K +
Sbjct: 416 LQRLCSTAHGSTLPAVREKYSQHKYK 441
>At1g47210 cyclin like protein
Length = 372
Score = 215 bits (548), Expect = 2e-56
Identities = 121/263 (46%), Positives = 166/263 (63%), Gaps = 5/263 (1%)
Query: 18 DIDSKLRDSPIWTSYAPDIYTNIHVRECE--RRPLANYMETLQQDITPGMRGILVDWLVE 75
DIDS+ D + Y DIY + E + +RPL +Y+E +Q+D+TP MRG+LVDWLVE
Sbjct: 88 DIDSRSDDPQMCGPYVADIYEYLRQLEVKPKQRPLPDYIEKVQKDVTPSMRGVLVDWLVE 147
Query: 76 VADEFKLVPRHTLPCCESH*S--IPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFC 133
VA+E+KL TL SH + T + Q V + YEEI P V+DFC
Sbjct: 148 VAEEYKL-GSETLYLTVSHIDRFLSLKTVNKQKLQLVGVSAMLIASKYEEISPPKVDDFC 206
Query: 134 VITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANY 193
ITDNT+S+Q+V+KME ++L L F+L PTI TF+RRF +VAQ KV LE L Y
Sbjct: 207 YITDNTFSKQDVVKMEADILLALQFELGRPTINTFMRRFTRVAQDDFKVPHLQLEPLCCY 266
Query: 194 LAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLEL 253
L+EL++++Y ++F PS +AAS+V LAR+ + +HPWN LE YT YKA++L+ V +
Sbjct: 267 LSELSILDYKTVKFVPSLLAASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGII 326
Query: 254 IDLQLNTKRCRLNAVREKYQHQK 276
DL L+ + L AVREKY+H K
Sbjct: 327 HDLYLSRRGGALQAVREKYKHHK 349
>At5g43080 cyclin A-type
Length = 355
Score = 213 bits (543), Expect = 7e-56
Identities = 113/263 (42%), Positives = 165/263 (61%), Gaps = 3/263 (1%)
Query: 18 DIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVA 77
DID++ D + Y I+ + E + RPL +Y+E +Q+D+T MRG+LVDWLVEVA
Sbjct: 73 DIDTRSDDPQMCGPYVTSIFEYLRQLEVKSRPLVDYIEKIQKDVTSNMRGVLVDWLVEVA 132
Query: 78 DEFKLVPRHTLPCCESH*S--IPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFCVI 135
+E+KL+ TL S+ + T + Q + + YEEI P V+DFC I
Sbjct: 133 EEYKLLS-DTLYLAVSYIDRFLSLKTVNKQRLQLLGVTSMLIASKYEEITPPNVDDFCYI 191
Query: 136 TDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLA 195
TDNTY++QE++KME ++L L F+L PT TFLRRF +VAQ +++ +EFL +YL+
Sbjct: 192 TDNTYTKQEIVKMEADILLALQFELGNPTSNTFLRRFTRVAQEDFEMSHLQMEFLCSYLS 251
Query: 196 ELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELID 255
EL++++Y ++F PS +AAS+V LAR+ + +HPWN LE YT YKA +LK V + D
Sbjct: 252 ELSMLDYQSVKFLPSTVAASAVFLARFIIRPKQHPWNVMLEEYTRYKAGDLKECVAMIHD 311
Query: 256 LQLNTKRCRLNAVREKYQHQKVR 278
L L+ K L A+REKY+ K +
Sbjct: 312 LYLSRKCGALEAIREKYKQHKFK 334
>At1g47220 cyclin, putative
Length = 327
Score = 201 bits (510), Expect = 5e-52
Identities = 117/266 (43%), Positives = 166/266 (61%), Gaps = 11/266 (4%)
Query: 18 DIDSKLRDSPIWTSYAPDIYTNIHVRECE----RRPLANYMETLQQDITPGMRGILVDWL 73
DID++ D + Y DIY ++RE E RPL +Y+E +Q+DITP RG+LVDWL
Sbjct: 42 DIDARSDDPQMCGLYVSDIYE--YLRELEVKPKLRPLHDYIEKIQEDITPSKRGVLVDWL 99
Query: 74 VEVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVE 130
VEVA+EF+LV T+ + S+ + V+ ++ + YEE P VE
Sbjct: 100 VEVAEEFELVSETLYLTVSYIDRFLSLKMVNEHWLQLVGVSAMFIASK--YEEKRRPKVE 157
Query: 131 DFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFL 190
DFC IT NTY++Q+VLKME+++L L F+L PT TFLRRFI+VAQ KV LE L
Sbjct: 158 DFCYITANTYTKQDVLKMEEDILLALEFELGRPTTNTFLRRFIRVAQEDFKVPNLQLEPL 217
Query: 191 ANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTV 250
YL+EL++++YS ++F PS +AAS+V LAR+ + ++HPW+ LE T YKA++L+ V
Sbjct: 218 CCYLSELSMLDYSCVKFVPSLLAASAVFLARFIILPNQHPWSQMLEECTKYKAADLQVCV 277
Query: 251 LELIDLQLNTKRCRLNAVREKYQHQK 276
++DL L+ AVREKY+ K
Sbjct: 278 EIMLDLYLSRSEGASKAVREKYKQHK 303
>At1g47230 cyclin like protein
Length = 369
Score = 199 bits (507), Expect = 1e-51
Identities = 116/266 (43%), Positives = 166/266 (61%), Gaps = 9/266 (3%)
Query: 19 IDSKLRDSPIWTSYAPDIYTNIHVRECE----RRPLANYMETLQQDITPGMRGILVDWLV 74
I+S+ D + +A DI ++RE E RPL +Y+E +Q D+TP MR +LVDWLV
Sbjct: 82 IESRSVDPQMCEPFASDICA--YLREMEGKPKHRPLPDYIEKVQSDLTPHMRAVLVDWLV 139
Query: 75 EVADEFKLVPRHTLPCCESH*S--IPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDF 132
EVA+E+KLV TL S+ + + Q V + YEEI P VEDF
Sbjct: 140 EVAEEYKLVS-DTLYLTISYVDRFLSVKPINRQKLQLVGVSAMLIASKYEEIGPPKVEDF 198
Query: 133 CVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLAN 192
C ITDNT+++QEV+ ME ++L L F+L PTIKTFLRRF +VAQ K +Q +EFL
Sbjct: 199 CYITDNTFTKQEVVSMEADILLALQFELGSPTIKTFLRRFTRVAQEDFKDSQLQIEFLCC 258
Query: 193 YLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLE 252
YL+EL++++Y+ +++ PS ++AS+V LAR+ + +HPWN LE YT YKA++L+ V
Sbjct: 259 YLSELSMLDYTCVKYLPSLLSASAVFLARFIIRPKQHPWNQMLEEYTKYKAADLQVCVGI 318
Query: 253 LIDLQLNTKRCRLNAVREKYQHQKVR 278
+ DL L+ + L AVR KY+ K +
Sbjct: 319 IHDLYLSRRGNTLEAVRNKYKQHKYK 344
>At1g77390
Length = 477
Score = 142 bits (357), Expect = 3e-34
Identities = 96/251 (38%), Positives = 140/251 (55%), Gaps = 13/251 (5%)
Query: 16 IVDIDSKLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVE 75
IV+IDS L D + S+A DIY ++ V E +RP +YME Q I MR IL+DWLVE
Sbjct: 162 IVNIDSDLMDPQLCASFACDIYEHLRVSEVNKRPALDYMERTQSSINASMRSILIDWLVE 221
Query: 76 VADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFC-- 133
VA+E++L P TL ++ + T + K + + I + A G FC
Sbjct: 222 VAEEYRLSPE-TLYLAVNYVD-RYLTGNAINKQNLQLLGVTCMMIAAFLTAFGDGVFCSE 279
Query: 134 ---VITDNTYSRQ--EVLKMEKEVLNLLHFQLAVPT---IKTFLRRFIQVAQTSSKVAQA 185
V +N+ S+ EV +V+ + HF L P K +RRF++ AQ +V
Sbjct: 280 LLEVRINNSNSKMFLEVSSCHIDVIFIHHF-LWFPADLDFKNVVRRFLRAAQGRKEVPSL 338
Query: 186 DLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASE 245
E LA YL EL+L++Y+ L++ PS +AAS+V LA++TL+ S PWN TLEHYT+Y+A
Sbjct: 339 LSECLACYLTELSLLDYAMLRYAPSLVAASAVFLAQYTLHPSRKPWNATLEHYTSYRAKH 398
Query: 246 LKTTVLELIDL 256
++ V L+ L
Sbjct: 399 MEACVKNLLQL 409
>At1g76310 putative G2/mitotic-specific cyclin 1 (B-like cyclin)
Length = 418
Score = 134 bits (337), Expect = 6e-32
Identities = 93/273 (34%), Positives = 138/273 (50%), Gaps = 12/273 (4%)
Query: 8 LSASVGLGIVDIDSKLRDSPIWT-SYAPDIYTNIHVRECERRPLANYMETLQQDITPGMR 66
+ A V ++DIDS +++P+ Y DIY EC NYME Q DI MR
Sbjct: 139 IDAEVEESVMDIDSCDKNNPLSVVEYINDIYCFYKKNECRSCVPPNYMEN-QHDINERMR 197
Query: 67 GILVDWLVEVADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI---YEE 123
GIL DWL+EV +F+L+ TL + + + + + A + YEE
Sbjct: 198 GILFDWLIEVHYKFELM-EETLYLTINLIDRFLAVHQHIARKKLQLVGVTAMLLACKYEE 256
Query: 124 ICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVA 183
+ P V+D +I+D Y+R E+L MEK + N L F +PT F+RRF++ AQ+ K
Sbjct: 257 VSVPVVDDLILISDKAYTRTEILDMEKLMANTLQFNFCLPTPYVFMRRFLKAAQSDKK-- 314
Query: 184 QADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKA 243
LE L+ ++ EL LVEY LQ+ PS++AAS++ A+ TL E W+ T E ++ Y
Sbjct: 315 ---LELLSFFMIELCLVEYEMLQYTPSQLAASAIYTAQSTLKGYE-DWSKTSEFHSGYTE 370
Query: 244 SELKTTVLELIDLQLNTKRCRLNAVREKYQHQK 276
L +++ L +L V KY K
Sbjct: 371 EALLECSRKMVGLHHKAGTGKLTGVHRKYNTSK 403
>At1g20610 hypothetical protein
Length = 429
Score = 130 bits (326), Expect = 1e-30
Identities = 88/265 (33%), Positives = 137/265 (51%), Gaps = 13/265 (4%)
Query: 16 IVDIDSKLRDSPIWT-SYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLV 74
++DID+ +++P+ Y D++T E NYM+ QQD+ MRGIL+DWL+
Sbjct: 160 VIDIDACDKNNPLAAVEYIHDMHTFYKNFEKLSCVPPNYMDN-QQDLNERMRGILIDWLI 218
Query: 75 EVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVED 131
EV +F+L+ T+ + ++ V L YEE+ P V+D
Sbjct: 219 EVHYKFELMEETLYLTINVIDRFLAVHQIVRKKLQLVGVTALLLACK--YEEVSVPVVDD 276
Query: 132 FCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLA 191
+I+D YSR+EVL MEK + N L F ++PT F++RF++ AQ+ K LE L+
Sbjct: 277 LILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDKK-----LEILS 331
Query: 192 NYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVL 251
++ EL LVEY L++ PSK+AAS++ A+ TL E W+ T E +T Y +L
Sbjct: 332 FFMIELCLVEYEMLEYLPSKLAASAIYTAQCTLKGFEE-WSKTCEFHTGYNEKQLLACAR 390
Query: 252 ELIDLQLNTKRCRLNAVREKYQHQK 276
+++ +L V KY K
Sbjct: 391 KMVAFHHKAGTGKLTGVHRKYNTSK 415
>At2g17620 putative cyclin 2
Length = 429
Score = 129 bits (323), Expect = 2e-30
Identities = 95/264 (35%), Positives = 132/264 (49%), Gaps = 11/264 (4%)
Query: 16 IVDIDS-KLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLV 74
IVDID ++S Y D+Y E +YM Q D+ MR IL+DWL+
Sbjct: 154 IVDIDVLDSKNSLAAVEYVQDLYAFYRTMERFSCVPVDYMMQ-QIDLNEKMRAILIDWLI 212
Query: 75 EVADEFKLVPRHTLPCCESH*SIPFPTFDYQTKAA--VAWYYLHADFIYEEICAPGVEDF 132
EV D+F L+ TL + + K V L YEE+ P VED
Sbjct: 213 EVHDKFDLI-NETLFLTVNLIDRFLSKQNVMRKKLQLVGLVALLLACKYEEVSVPVVEDL 271
Query: 133 CVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLAN 192
+I+D Y+R +VL+MEK +L+ L F +++PT FL+RF++ AQ K E LA+
Sbjct: 272 VLISDKAYTRNDVLEMEKTMLSTLQFNISLPTQYPFLKRFLKAAQADKK-----CEVLAS 326
Query: 193 YLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLE 252
+L ELALVEY L+F PS +AA+SV A+ TL+ S WN T E + +Y +L +
Sbjct: 327 FLIELALVEYEMLRFPPSLLAATSVYTAQCTLDGS-RKWNSTCEFHCHYSEDQLMECSRK 385
Query: 253 LIDLQLNTKRCRLNAVREKYQHQK 276
L+ L L V KY K
Sbjct: 386 LVSLHQRAATGNLTGVYRKYSTSK 409
>At4g35620 cyclin 2b protein
Length = 429
Score = 125 bits (315), Expect = 2e-29
Identities = 93/274 (33%), Positives = 141/274 (50%), Gaps = 31/274 (11%)
Query: 16 IVDIDS-KLRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLV 74
++DID +S Y D+Y E +YM Q DI+ MR IL+DWL+
Sbjct: 155 VLDIDEYDANNSLAAVEYVQDLYDFYRKTERFSCVPLDYMAQ-QFDISDKMRAILIDWLI 213
Query: 75 EVADEFKLVPRHTLPCCESH*SIPFPTFD----YQTKAAVAWYYLHADFI--------YE 122
EV D+F+L+ TL F T + + +K AVA L + YE
Sbjct: 214 EVHDKFELM-NETL----------FLTVNLIDRFLSKQAVARKKLQLVGLVALLLACKYE 262
Query: 123 EICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKV 182
E+ P VED VI+D Y+R +VL+MEK +L+ L F +++PT FL+RF++ AQ+ K
Sbjct: 263 EVSVPIVEDLVVISDKAYTRTDVLEMEKIMLSTLQFNMSLPTQYPFLKRFLKAAQSDKK- 321
Query: 183 AQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYK 242
LE LA++L ELALV+Y +++ PS +AA++V A+ T++ WN T E + +Y
Sbjct: 322 ----LEILASFLIELALVDYEMVRYPPSLLAATAVYTAQCTIHGFSE-WNSTCEFHCHYS 376
Query: 243 ASELKTTVLELIDLQLNTKRCRLNAVREKYQHQK 276
++L ++ L +L V KY K
Sbjct: 377 ENQLLECCRRMVRLHQKAGTDKLTGVHRKYSSSK 410
>At5g06150 mitosis-specific cyclin 1b
Length = 445
Score = 118 bits (296), Expect = 3e-27
Identities = 91/262 (34%), Positives = 134/262 (50%), Gaps = 16/262 (6%)
Query: 16 IVDIDSKLRDSPIWT-SYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLV 74
I+DID +D+ + Y D+Y+ E E +P YM +Q ++ MR IL+DWL+
Sbjct: 165 IIDIDESDKDNHLAAVEYVDDMYSFYKEVEKESQPKM-YMH-IQTEMNEKMRAILIDWLL 222
Query: 75 EVADEFKLVPRH---TLPCCESH*SIP-FPTFDYQTKAAVAWYYLHADFIYEEICAPGVE 130
EV +F+L T+ + S+ P + Q A YEEI P V
Sbjct: 223 EVHIKFELNLETLYLTVNIIDRFLSVKAVPKRELQLVGISALLIASK---YEEIWPPQVN 279
Query: 131 DFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFL 190
D +TDN YS +++L MEK +L L + L VPT FL RFI+ + ++ ++E +
Sbjct: 280 DLVYVTDNAYSSRQILVMEKAILGNLEWYLTVPTQYVFLVRFIK-----ASMSDPEMENM 334
Query: 191 ANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTV 250
++LAEL ++ Y L F PS +AAS+V AR +LN+S W TL+ +T Y SE+
Sbjct: 335 VHFLAELGMMHYDTLTFCPSMLAASAVYTARCSLNKSP-AWTDTLQFHTGYTESEIMDCS 393
Query: 251 LELIDLQLNTKRCRLNAVREKY 272
L L RL AV +KY
Sbjct: 394 KLLAFLHSRCGESRLRAVYKKY 415
>At4g37490 cyclin cyc1
Length = 428
Score = 118 bits (295), Expect = 4e-27
Identities = 89/237 (37%), Positives = 127/237 (53%), Gaps = 17/237 (7%)
Query: 16 IVDIDSK-LRDSPIWTSYAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLV 74
IVDIDS + + Y DIY+ E E RP +YM + Q DI MR ILV+WL+
Sbjct: 148 IVDIDSADVENDLAAVEYVEDIYSFYKSVESEWRP-RDYMAS-QPDINEKMRLILVEWLI 205
Query: 75 EVADEFKLVPRH---TLPCCESH*SI-PFPTFDYQTKAAVAWYYLHADFIYEEICAPGVE 130
+V F+L P T+ + S+ P P + Q A L YEEI P VE
Sbjct: 206 DVHVRFELNPETFYLTVNILDRFLSVKPVPRKELQLVGLSA---LLMSAKYEEIWPPQVE 262
Query: 131 DFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFL 190
D I D+ YS +++L MEK +L+ L + L VPT FL RFI+ + +A +E +
Sbjct: 263 DLVDIADHAYSHKQILVMEKTILSTLEWYLTVPTHYVFLARFIK-----ASIADEKMENM 317
Query: 191 ANYLAELALVEY-SFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASEL 246
+YLAEL ++ Y + + F PS +AAS++ AR +L Q W TL+H+T Y ++L
Sbjct: 318 VHYLAELGVMHYDTMIMFSPSMVAASAIYAARSSLRQVP-IWTSTLKHHTGYSETQL 373
>At2g26760 putative cyclin
Length = 387
Score = 115 bits (289), Expect = 2e-26
Identities = 89/274 (32%), Positives = 143/274 (51%), Gaps = 20/274 (7%)
Query: 7 KLSASVGLGIVDIDSKLRDSPIWT-SYAPDIYTNIHVRECERRPLANYMETLQQDITPGM 65
K ++ + ++DID+ ++ + Y DI+ E E + +Y+ + Q +I M
Sbjct: 104 KAASGLKDAVIDIDAVDANNELAAVEYVEDIFKFYRTVE-EEGGIKDYIGS-QPEINEKM 161
Query: 66 RGILVDWLVEVADEFKLVPRH---TLPCCESH*SIPFPTFDYQTKAAVAWYYLHADFI-- 120
R IL+DWLV+V +F+L+P T+ + F + + + L A I
Sbjct: 162 RSILIDWLVDVHRKFELMPETLYLTINLVDR-----FLSLTMVHRRELQLLGLGAMLIAC 216
Query: 121 -YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTS 179
YEEI AP V DF I+DN Y+R++VL MEK +L + + + VPT FL R+++ A
Sbjct: 217 KYEEIWAPEVNDFVCISDNAYNRKQVLAMEKSILGQVEWYITVPTPYVFLARYVKAAVP- 275
Query: 180 SKVAQADLEFLANYLAELALVEYSFLQF-QPSKIAASSVLLARWTLNQSEHPWNPTLEHY 238
A++E L YLAEL L++Y + +PS +AAS+V AR L ++ W TL+H+
Sbjct: 276 ---CDAEMEKLVFYLAELGLMQYPIVVLNRPSMLAASAVYAARQILKKTPF-WTETLKHH 331
Query: 239 TNYKASELKTTVLELIDLQLNTKRCRLNAVREKY 272
T Y E+ L+ L+ + +L AV +KY
Sbjct: 332 TGYSEDEIMEHAKMLMKLRDSASESKLIAVFKKY 365
>At3g11520 cyclin box
Length = 414
Score = 112 bits (279), Expect = 3e-25
Identities = 87/244 (35%), Positives = 121/244 (48%), Gaps = 13/244 (5%)
Query: 32 YAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVADEFKLVPRH---TL 88
Y D+Y E +P YM T Q +I MR IL+DWLVEV +F L P T+
Sbjct: 159 YVEDMYIFYKEVVNESKPQM-YMHT-QPEIDEKMRSILIDWLVEVHVKFDLSPETLYLTV 216
Query: 89 PCCESH*SIPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFCVITDNTYSRQEVLKM 148
+ S+ T + V L YEEI P V D +TDN+Y+ +++L M
Sbjct: 217 NIIDRFLSLK--TVPRRELQLVGVSALLIASKYEEIWPPQVNDLVYVTDNSYNSRQILVM 274
Query: 149 EKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVEYSFLQFQ 208
EK +L L + L VPT FL RFI+ + + K LE L ++LAEL L+ + L F
Sbjct: 275 EKTILGNLEWYLTVPTQYVFLVRFIKASGSDQK-----LENLVHFLAELGLMHHDSLMFC 329
Query: 209 PSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELIDLQLNTKRCRLNAV 268
PS +AAS+V AR LN++ W TL+ +T Y S+L L + +L V
Sbjct: 330 PSMLAASAVYTARCCLNKTP-TWTDTLKFHTGYSESQLMDCSKLLAFIHSKAGESKLRGV 388
Query: 269 REKY 272
+KY
Sbjct: 389 LKKY 392
>At1g16330 putative mitotic cyclin
Length = 518
Score = 112 bits (279), Expect = 3e-25
Identities = 77/245 (31%), Positives = 125/245 (50%), Gaps = 14/245 (5%)
Query: 32 YAPDIYTNIHVRECERRPLANYMETLQQDITPGMRGILVDWLVEVADEFKLVPRH---TL 88
Y DIY E L +Y+ +++P RGIL++WL+EV +F L+ T+
Sbjct: 265 YVDDIYQFYWTAEALNPALGHYLSA-HAEVSPVTRGILINWLIEVHFKFDLMHETLYLTM 323
Query: 89 PCCESH*S-IPFPTFDYQTKAAVAWYYLHADFIYEEICAPGVEDFCVITDNTYSRQEVLK 147
+ + S +P + Q A YE+ P ++D I+ +Y+R+++L
Sbjct: 324 DLLDRYLSQVPIHKNEMQLIGLTALLLASK---YEDYWHPRIKDLISISAESYTREQILG 380
Query: 148 MEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSSKVAQADLEFLANYLAELALVEYSFLQF 207
ME+ +L L F+L PT F+ RF++ AQ++ K LE LA YL EL LVEY L++
Sbjct: 381 MERSMLKQLKFRLNAPTPYVFMLRFLKAAQSNKK-----LEQLAFYLIELCLVEYEALKY 435
Query: 208 QPSKIAASSVLLARWTLNQSEHPWNPTLEHYTNYKASELKTTVLELIDLQLNTKRCRLNA 267
+PS + AS++ +AR TL+ + W L ++T+Y S++K ++ K L
Sbjct: 436 KPSLLCASAIYVARCTLHMTP-VWTSLLNNHTHYNVSQMKDCSDMILRFHKAAKTGNLRV 494
Query: 268 VREKY 272
EKY
Sbjct: 495 TYEKY 499
>At1g20590 hypothetical protein
Length = 199
Score = 103 bits (257), Expect = 1e-22
Identities = 54/134 (40%), Positives = 82/134 (60%), Gaps = 6/134 (4%)
Query: 121 YEEICAPGVEDFCVITDNTYSRQEVLKMEKEVLNLLHFQLAVPTIKTFLRRFIQVAQTSS 180
YEE+ P V+D +I+D YSR+EVL MEK + N L F ++PT F++RF++ AQ+
Sbjct: 28 YEEVSVPVVDDLILISDKAYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFLKAAQSDK 87
Query: 181 KVAQADLEFLANYLAELALVEYSFLQFQPSKIAASSVLLARWTLNQSEHPWNPTLEHYTN 240
K LE L+ ++ EL LVEY L++ PSK+AAS++ A+ TL E W+ T E +T
Sbjct: 88 K-----LEILSFFMIELCLVEYEMLEYLPSKLAASAIYTAQCTLKGFEE-WSKTCEFHTG 141
Query: 241 YKASELKTTVLELI 254
Y +L +++
Sbjct: 142 YNEEQLLACARKMV 155
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.324 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,969,309
Number of Sequences: 26719
Number of extensions: 230322
Number of successful extensions: 686
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 620
Number of HSP's gapped (non-prelim): 46
length of query: 293
length of database: 11,318,596
effective HSP length: 99
effective length of query: 194
effective length of database: 8,673,415
effective search space: 1682642510
effective search space used: 1682642510
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146722.7