BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146721.5 - phase: 0 /pseudo
         (59 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g02360 6-phosphogluconate dehydrogenase, putative                   71  1e-13
At1g64190 6-phosphogluconate dehydrogenase, putative                   51  1e-07
At5g41670 6-phosphogluconate dehydrogenase                             49  5e-07
At5g38660 unknown protein                                              25  7.3
At2g22620 unknown protein                                              25  7.3

>At3g02360 6-phosphogluconate dehydrogenase, putative
          Length = 486

 Score = 70.9 bits (172), Expect = 1e-13
 Identities = 36/65 (55%), Positives = 45/65 (68%), Gaps = 10/65 (15%)

Query: 5  EPTNLARIGLAVIGQNLALNIAEKGFQFQF----------TIERAKQEGNLPIYGYHDFK 54
          +PT +   GLAV+GQNLALNIAEKGF              T+ERAK+EGNLP+YG+HD +
Sbjct: 4  QPTRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVERAKKEGNLPLYGFHDPE 63

Query: 55 YFVQS 59
           FV+S
Sbjct: 64 SFVKS 68


>At1g64190 6-phosphogluconate dehydrogenase, putative
          Length = 487

 Score = 51.2 bits (121), Expect = 1e-07
 Identities = 33/68 (48%), Positives = 40/68 (58%), Gaps = 13/68 (19%)

Query: 5  EPTNLARIGLA---VIGQNLALNIAEKGFQFQF----------TIERAKQEGNLPIYGYH 51
          E   L+RIGLA   V+GQNLALNIAEKGF              T++RA  EGNLP+ G +
Sbjct: 2  ESAALSRIGLAGLAVMGQNLALNIAEKGFPISVYNRTTSKVDETLDRAAVEGNLPVSGQY 61

Query: 52 DFKYFVQS 59
            + FV S
Sbjct: 62 SPRDFVLS 69


>At5g41670 6-phosphogluconate dehydrogenase
          Length = 487

 Score = 48.9 bits (115), Expect = 5e-07
 Identities = 31/68 (45%), Positives = 39/68 (56%), Gaps = 13/68 (19%)

Query: 5  EPTNLARIGLA---VIGQNLALNIAEKGFQFQF----------TIERAKQEGNLPIYGYH 51
          E   L+RIGLA   V+GQNLALNIA+KGF              T++RA  EG LP+ G +
Sbjct: 2  ESVALSRIGLAGLAVMGQNLALNIADKGFPISVYNRTTSKVDETLDRASNEGKLPVAGQY 61

Query: 52 DFKYFVQS 59
            + FV S
Sbjct: 62 SPRDFVLS 69


>At5g38660 unknown protein
          Length = 286

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 12/28 (42%), Positives = 16/28 (56%)

Query: 9   LARIGLAVIGQNLALNIAEKGFQFQFTI 36
           LA+I   VIG  L +++   GF   FTI
Sbjct: 91  LAKISFGVIGLGLGVSLLSYGFGAYFTI 118


>At2g22620 unknown protein
          Length = 677

 Score = 25.0 bits (53), Expect = 7.3
 Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 14/59 (23%)

Query: 10  ARIGLAVIGQNLALNIAEKGFQF--------QFTIERAKQEGNLPIYGY-----HDFKY 55
           A +GLA IG+  +     KG+QF        +F IE  +  GN  +Y +      D+KY
Sbjct: 399 AFVGLAPIGEAGSWQTESKGYQFWTKADRRGRFIIENVR-AGNYSLYAWGSGFIGDYKY 456


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.321    0.138    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,206,768
Number of Sequences: 26719
Number of extensions: 33023
Number of successful extensions: 68
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 61
Number of HSP's gapped (non-prelim): 5
length of query: 59
length of database: 11,318,596
effective HSP length: 35
effective length of query: 24
effective length of database: 10,383,431
effective search space: 249202344
effective search space used: 249202344
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)