BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146719.12 + phase: 0 /pseudo
         (758 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g49400 hypothetical protein                                         68  2e-11
At3g59020 putative protein                                             32  1.7

>At3g49400 hypothetical protein
          Length = 719

 Score = 68.2 bits (165), Expect = 2e-11
 Identities = 33/60 (55%), Positives = 41/60 (68%)

Query: 6  SPLQPAMLMGSPSFPNALAWSHDNLIAAASGHFVTILRPDLPNGPRGLIKVIPNEPLILG 65
          S  Q A L+ SPS+PNA+AWS +NLIA A+GH V I+ P LP GPRGLI +   E   +G
Sbjct: 3  SRFQEASLVTSPSYPNAVAWSSENLIAVAAGHLVIIINPALPTGPRGLITISDAELYQIG 62


>At3g59020 putative protein
          Length = 1112

 Score = 31.6 bits (70), Expect = 1.7
 Identities = 23/80 (28%), Positives = 34/80 (41%), Gaps = 17/80 (21%)

Query: 19  FPNALAWSHDNLIAAASGHFVTILRPDLPNGPRGLIKV-----------IPNEPLILGFI 67
           FPN L   H N I+  +GH++T   PD       +I V           +   P +LG +
Sbjct: 777 FPNILVPLH-NYISRGTGHYLTCKEPDYQQNLWNVISVLMANKNIDDSDLEPAPKLLGIV 835

Query: 68  DRKACLQLCIGMINQLFDQY 87
                LQ C G ++Q  + Y
Sbjct: 836 -----LQTCKGQVDQWVEPY 850


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.360    0.162    0.604 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,637,505
Number of Sequences: 26719
Number of extensions: 544258
Number of successful extensions: 1796
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 1795
Number of HSP's gapped (non-prelim): 2
length of query: 758
length of database: 11,318,596
effective HSP length: 107
effective length of query: 651
effective length of database: 8,459,663
effective search space: 5507240613
effective search space used: 5507240613
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 37 (21.8 bits)
S2: 64 (29.3 bits)