BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146693.3 - phase: 0 /pseudo
         (634 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g75210 cytosolic IMP-GMP specific 5'-nucleotidase like protein      30  5.4
At1g71980 unknown protein                                              30  5.4
At3g50580 proline-rich protein                                         29  9.1

>At1g75210 cytosolic IMP-GMP specific 5'-nucleotidase like protein
          Length = 642

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 11/14 (78%), Positives = 12/14 (85%)

Query: 62 PRSRFHHFMGRYEA 75
          PRSRFHHF G+Y A
Sbjct: 71 PRSRFHHFPGKYPA 84


>At1g71980 unknown protein
          Length = 448

 Score = 29.6 bits (65), Expect = 5.4
 Identities = 17/57 (29%), Positives = 27/57 (46%), Gaps = 1/57 (1%)

Query: 312 SPRTEKPNRISERLSPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVNP 368
           SP   + + IS   SP SL    +SP   + + P  P  P+   P +    ++P+NP
Sbjct: 371 SPSPSQRSYISHMASPQSLGYPTISPFNTRYMSPYRPS-PSNASPAMAGSSNYPLNP 426


>At3g50580 proline-rich protein
          Length = 265

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 21/56 (37%), Positives = 28/56 (49%), Gaps = 5/56 (8%)

Query: 326 SPNSLPRLILSPHTPKCLRPKSPKWPNKWPPLLKH*ESFPVNPKQTPKLMS-TPFL 380
           S  S P + +SP TP    P +P  P+  PP  K     P  PK++P   S TPF+
Sbjct: 66  SNGSAPAISISPSTP---IPSTPSTPSPPPPAPKK-SPPPPTPKKSPSPPSLTPFV 117


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.364    0.164    0.631 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,999,676
Number of Sequences: 26719
Number of extensions: 444797
Number of successful extensions: 2240
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 2234
Number of HSP's gapped (non-prelim): 9
length of query: 634
length of database: 11,318,596
effective HSP length: 105
effective length of query: 529
effective length of database: 8,513,101
effective search space: 4503430429
effective search space used: 4503430429
T: 11
A: 40
X1: 14 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 36 (21.5 bits)
S2: 63 (28.9 bits)