Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146683.17 - phase: 0 
         (494 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At3g59780 putative protein                                            164  8e-41
At2g30930 unknown protein                                              33  0.47
At5g39390 receptor protein kinase -like protein                        32  0.62
At3g62040 putative protein                                             32  1.0
At5g55860 myosin heavy chain-like                                      31  1.4
At3g28790 unknown protein                                              31  1.4
At5g59730 unknown protein                                              31  1.8
At4g33500 unknown protein                                              31  1.8
At3g53040 late embryogenesis abundant protein - like                   31  1.8
At2g34680 auxin-induced protein (AIR9)                                 31  1.8
At2g30740 putative protein kinase                                      31  1.8
At5g16680 putative protein                                             30  4.0
At3g61450 syntaxin of plants 73 (SYP73)                                30  4.0
At2g43230 protein kinase like protein                                  30  4.0
At2g41450 hypothetical protein                                         30  4.0
At5g57610 putative protein                                             29  6.8
At5g44560 unknown protein                                              29  6.8
At2g36500 unknown protein (At2g36500)                                  29  6.8

>At3g59780 putative protein
          Length = 663

 Score =  164 bits (416), Expect = 8e-41
 Identities = 87/218 (39%), Positives = 142/218 (64%), Gaps = 12/218 (5%)

Query: 80  PEAILSSTDITSGKIESVPSLIKGGNESLAATKASATEVFAGINETFSDSINKGENALRS 139
           P+A  S  D +SG  +S  S       SL   KAS  +  +G+ E+FS S+N+GENA+++
Sbjct: 82  PDAKASFDDFSSGLKQSFSS-------SLPDAKASVDDFSSGVKESFSSSLNQGENAVKN 134

Query: 140 SVDTATSFIDSVVKNATTSADNAFSKVFSAADQTGDLANKKITSFSSEIDGVTSKAPGLV 199
           ++++ +S + S+ KNA+   D+A ++ FS  DQTGD+A  K +SFS+ +   +++A  + 
Sbjct: 135 TLESFSSSVTSITKNASEVVDSAVNRAFSTLDQTGDVAGDKFSSFSTGLKEASNRAAVIA 194

Query: 200 IDVLRRTVVAVESSLSSGASYVVYLYGSAKEFIPAEIRDTVNIYEDKAAQVLRPVGSATQ 259
           ID+LR++V   E S+++G S+VVY YGSAKE +P +++  +N  ED A +VL PVG+  Q
Sbjct: 195 IDLLRQSVSLGERSVTNGVSFVVYSYGSAKELLPPDVKSALNSSEDVALKVLSPVGAVLQ 254

Query: 260 -----QIYMAFYSLEKSLGLDPNDPIIPFVVFVGSSAT 292
                Q+ +A   LE+++GLDP+DPI+   +FVG++ T
Sbjct: 255 QYHDEQVSVAIGGLERNIGLDPDDPILHLFLFVGTTGT 292


>At2g30930 unknown protein
          Length = 164

 Score = 32.7 bits (73), Expect = 0.47
 Identities = 29/116 (25%), Positives = 47/116 (40%), Gaps = 12/116 (10%)

Query: 94  IESVPSLIKGGNESLAATK----ASATEVFAGINETFSDSINKGENALRSSVDT------ 143
           +E   S +    ES+ +T     AS T+    +N+T   ++   E  + +SV+T      
Sbjct: 5   LEKATSALSEAKESVTSTAESVTASLTDAEKTVNQTARSTLTDAETTVAASVETVKTEAA 64

Query: 144 -ATSFIDSVVKNATTSADNAFSKVFSAADQTGDLANKKITSFSSE-IDGVTSKAPG 197
            A      V   A  + D AFS+    A         K +  SS+ + GVT+   G
Sbjct: 65  AAPDKASGVSTQAKDAVDKAFSRGIEGAKSLLQTFEAKSSDISSKLVGGVTNLVSG 120


>At5g39390 receptor protein kinase -like protein
          Length = 502

 Score = 32.3 bits (72), Expect = 0.62
 Identities = 28/94 (29%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 49  RYSLSTVPEELVDFAKQSTEVSEPLVAPTVHPEAILSSTDITSG-KIESVPSLIKGGNES 107
           R+S  T  + L++F  Q TE    ++A   H   +     IT G K E V SL  GG + 
Sbjct: 26  RFSNETDMQALLEFKSQVTENKREVLASWNHSFPLCHWIGITCGRKQERVTSLDLGGFKL 85

Query: 108 LAATKASATEVFAGINETFSDSINKGENALRSSV 141
             +   S        N +F  S+N G+N+ +S++
Sbjct: 86  SGSISPSIG------NLSFLRSLNLGDNSFQSNI 113


>At3g62040 putative protein
          Length = 249

 Score = 31.6 bits (70), Expect = 1.0
 Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 15/92 (16%)

Query: 165 KVFSAADQTGDLAN-KKITSFSSEIDGVTS-KAPGLVIDVLRRTVVAVESSLSSGASYVV 222
           + F AA +  D+ + +K   F   I  + S KA GL      +TV   ES L  GA Y +
Sbjct: 159 EAFEAAIRIADIVDPRKTIFFDDSIRNIASAKATGL------KTVFVGESVLVPGADYAL 212

Query: 223 YLYGSAKEFIPAEIRDTVNIYEDKAAQVLRPV 254
               + KE IP       +++ED   + L P+
Sbjct: 213 SSIHNIKEAIP-------DLWEDNKDEKLEPI 237


>At5g55860 myosin heavy chain-like
          Length = 649

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 34/153 (22%), Positives = 59/153 (38%), Gaps = 14/153 (9%)

Query: 46  GEFRYSLSTVPEELVDFAKQSTEVSEPLVAPTVHPEAILSSTDITSGKIESVPSLIKGGN 105
           GE    L T  +EL    + S E+ E         E     + + S KIE +   I   N
Sbjct: 156 GEVCKELDTAKQELRKIRQVSNEILETKTVALSKVEEAKKVSKVHSEKIELLRKEIAAVN 215

Query: 106 ESLAATKASATEVFAGINETFSD------SINKG-ENALRSSVDTATSFIDSVVKNATTS 158
           ES+  TK + ++     +E F++      S   G E + + S+     F     K     
Sbjct: 216 ESVEQTKLACSQARKEQSEIFAEKEIQQKSYKAGMEESAKKSLALKNEFDPEFAKKLEVQ 275

Query: 159 ADNAFSKVFSAADQTGDLANKKITSFSSEIDGV 191
               ++++        +L  +  T+ +S+ID V
Sbjct: 276 LTETYNEI-------DELQKQMETAKASDIDSV 301


>At3g28790 unknown protein
          Length = 608

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 41/165 (24%), Positives = 67/165 (39%), Gaps = 12/165 (7%)

Query: 39  DNSSLSTGEFRYSLSTVPEELVDFAKQSTEVSEPLVAPTVHPEAILSSTDITSGKIESVP 98
           ++ S ++G    +  T      D  K +T  S    +P+  P    + +  T GK  S  
Sbjct: 340 ESESAASGSVSKTKETNKGSSGDTYKDTTGTSSG--SPSGSPSGSPTPSTSTDGKASS-- 395

Query: 99  SLIKGGNESLAATKASATEVFAGINETFSDSINKGENALRSSVDTATSFIDSVVKNATTS 158
              KG   + A   ASA+   +   E  + S  K  N+  SS  ++T+ +   V+  T+S
Sbjct: 396 ---KGSASASAGASASASAGASASAEESAASQKKESNSKSSSSSSSTTSVKE-VETQTSS 451

Query: 159 ADNAF----SKVFSAADQTGDLANKKITSFSSEIDGVTSKAPGLV 199
             N+F     K ++   +      K  TS S+     TS A  LV
Sbjct: 452 EVNSFISNLEKKYTGNSELKVFFEKLKTSMSASAKLSTSNAKELV 496


>At5g59730 unknown protein
          Length = 634

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 24/87 (27%), Positives = 41/87 (46%), Gaps = 2/87 (2%)

Query: 158 SADNAFSKVFSAADQTGDLANKKITSFSSEIDGVTSKAP--GLVIDVLRRTVVAVESSLS 215
           SA    S+V ++  + GD     +T F S I   TSK P  G  +  L R V+   S L+
Sbjct: 318 SAAAVRSQVINSLARLGDATRLMMTDFESAIQKETSKTPIIGGGVHPLTRYVMNYLSFLA 377

Query: 216 SGASYVVYLYGSAKEFIPAEIRDTVNI 242
             +  +  ++ + K  +P  + D++ I
Sbjct: 378 DYSDSIAAIFENWKLSVPTPLPDSLYI 404


>At4g33500 unknown protein
          Length = 724

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 8/111 (7%)

Query: 22  SLRSSFTAQAIKTVSAWDNSSLSTGEFRYSLSTVPEELVDFAKQSTEVSEPLVAPT---V 78
           +L ++F A+    V     +++S+ E   S S      VD   Q   +      P    V
Sbjct: 333 NLLNTFEAEENPVVEPTATAAVSSDEL-ISTSEATRHSVDEIAQKPIIDTSEKNPMETFV 391

Query: 79  HPEAILSSTDITSGKIESVPSLIKGGNESLAATKASATEVFAGINETFSDS 129
            PEA+ SS D ++ K+  V S ++   E++A+T    TE    + +T +DS
Sbjct: 392 EPEAVHSSVDESTEKLVVVTSDVENDGENVAST----TEDEITVRDTITDS 438


>At3g53040 late embryogenesis abundant protein - like
          Length = 479

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 35/159 (22%), Positives = 63/159 (39%), Gaps = 13/159 (8%)

Query: 29  AQAIKTVSAWDNSSLSTGEFRYSLSTVPEELVDFAKQSTEVSEPLVAPTVHPEAILSSTD 88
           A+A  +++A D   ++ G+  Y L+            +TE   P +  +V  +A+  + D
Sbjct: 17  AEAAASLAAEDLKDINKGDVTYKLTE--------RTTTTEPERPGLIGSVM-KAVQGTKD 67

Query: 89  ITSGKIESVPSLIKGGNESLAATKASATEVFAGINETFSDSINKGENALRSSVDTATSFI 148
              GK        + G + +A+ KA+      G  E    +  K +     + D A    
Sbjct: 68  AVIGKSHDTAESTREGAD-IASEKAAGMRDTTG--EVRDSTAQKTKETADYTADKAREAK 124

Query: 149 DSVVKNATTSADNAFSKVFSAADQTGDLANKKITSFSSE 187
           D        +AD A  K   A D+T D   K+   +++E
Sbjct: 125 DKTADKTKETADYAAEKAREAKDRTAD-KTKETAEYTAE 162


>At2g34680 auxin-induced protein (AIR9)
          Length = 1661

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 48/181 (26%), Positives = 75/181 (40%), Gaps = 19/181 (10%)

Query: 21  PSLRSSFTAQAIKTVSAWDNSSLSTGEFRYSLSTV-PEELVDFAKQSTEVSEPLVAPTVH 79
           P+  SS        V+   NS+    E     S V P+++   A ++  V   L      
Sbjct: 63  PTASSSLRVSGTTPVTIRRNSTGGVTENLAGTSKVLPKQVSTTASRTDPVRRSL------ 116

Query: 80  PEAILSSTDITSGKIESVPSL--------IKGGNESLA-ATKASATEVFAGINETFSDSI 130
           PE   SS    S K  S PSL        +  G+ SL  +T  S ++  +      S S+
Sbjct: 117 PELRKSSVSSLSAKTVSKPSLSESKKSVPVSPGSRSLTKSTGFSLSKPESSARPAMSVSV 176

Query: 131 NKGENALRSSVDTATSFIDSVVKNATTSADNAFSKVFSAADQTGDLANKKI--TSFSSEI 188
           +  + A  SSVD++ S   S   ++T ++    SKV S +  +    +  I   SFSS +
Sbjct: 177 SS-KRAPSSSVDSSGSRTSSGRLHSTLTSGRTVSKVSSPSAGSSPSVSSSIRSKSFSSPL 235

Query: 189 D 189
           D
Sbjct: 236 D 236


>At2g30740 putative protein kinase
          Length = 366

 Score = 30.8 bits (68), Expect = 1.8
 Identities = 44/197 (22%), Positives = 82/197 (41%), Gaps = 18/197 (9%)

Query: 63  AKQSTEVSEPLVAPTVHPEAILSSTDITSGKIESVPSLIKG-GNESLAATKASATEVFAG 121
           A Q  +  + +V P    EA+    ++    ++ V       G++SL    +     +A 
Sbjct: 32  ANQKNQKPQAVVKPEAQKEAL--PIEVPPLSVDEVKEKTDNFGSKSLIGEGSYGRVYYAT 89

Query: 122 INETFSDSINKGENALRSSVDTATSFIDSVVKNATTSADNAFSKVFSAADQTGDLANKKI 181
           +N+  + ++ K + A     +T T F++ V   +    +N    V    D+   +   + 
Sbjct: 90  LNDGKAVALKKLDVA--PEAETNTEFLNQVSMVSRLKHENLIQLVGYCVDENLRVLAYEF 147

Query: 182 TSFSSEID------GVTSKAPGLVIDVLRRTVVAVESSLSSGASYVVYLYGSAK-EFIPA 234
            +  S  D      GV    PG  +D L R  +AVE+     A  + YL+   +   I  
Sbjct: 148 ATMGSLHDILHGRKGVQGAQPGPTLDWLTRVKIAVEA-----ARGLEYLHEKVQPPVIHR 202

Query: 235 EIRDT-VNIYEDKAAQV 250
           +IR + V ++ED  A+V
Sbjct: 203 DIRSSNVLLFEDYQAKV 219


>At5g16680 putative protein
          Length = 1280

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 32/126 (25%), Positives = 58/126 (45%), Gaps = 8/126 (6%)

Query: 95  ESVPSLIKGGNESLAATKASATEVFAGINETFSDSINKGENALRSSVDTATSFIDSVVKN 154
           + +PS  KGG  + ++  +  ++      +   + +NKG N LR++VD A     S  KN
Sbjct: 634 KGLPSSQKGGQTAESSDTSGVSDSDLSTTKNVKEDLNKG-NRLRAAVDAALRKKPSFGKN 692

Query: 155 ATTSADNA--FSKVFSAADQT--GDLANKKITSFSSEIDGVTSKAPGL--VIDVLRRTVV 208
                 +A   + V S++++T    L +K   +  S  +G+    P L    D  ++T+V
Sbjct: 693 RVLEQSDASLVANVDSSSEKTLRNQLPSKMHKNHVSH-EGLQGGHPILWPTSDPYKQTIV 751

Query: 209 AVESSL 214
             E  L
Sbjct: 752 TNEKQL 757


>At3g61450 syntaxin of plants 73 (SYP73)
          Length = 263

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 18/55 (32%), Positives = 32/55 (57%), Gaps = 5/55 (9%)

Query: 153 KNATTSADNAFSKVFSAADQTGDLANKKITSFSSEIDGVTSKAPGLVIDV-LRRT 206
           ++A  S D+AFS+++SA +   +   +K    SSE    T+KA  + ++  +RRT
Sbjct: 26  RDANVSGDDAFSRLYSAVEYALETVLQKTEDLSSE----TNKAKAVAMNAEIRRT 76


>At2g43230 protein kinase like protein
          Length = 406

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 44/209 (21%), Positives = 88/209 (42%), Gaps = 21/209 (10%)

Query: 52  LSTVPEELVDFAKQSTEVSEPLVAPTV-HPEAILSSTDITSGKIESVPSLIKG-GNESLA 109
           L T P    D+ + + +   P+  P +  P  I    D+ +  +  +    +  G+++L 
Sbjct: 62  LKTPPTRHYDYGRNNKKTPAPVKPPVLKEPPPI----DVPAMSLVELKEKTQNFGSKALI 117

Query: 110 ATKASATEVFAGINETFSDSINKGENALRSSVDTATSFIDSVVKNATTSADNAFSKVFSA 169
              +     +A  N+  + ++ K +NA  S  +T   F+  V K +   +DN    +   
Sbjct: 118 GEGSYGRVYYANFNDGKAVAVKKLDNA--SEPETNVEFLTQVSKVSRLKSDNFVQLLGYC 175

Query: 170 ADQTGDLANKKITSFSSEID------GVTSKAPGLVIDVLRRTVVAVESSLSSGASYVVY 223
            +    +   +  +  S  D      GV    PG  ++ ++R  VAV++     A  + Y
Sbjct: 176 VEGNLRVLAYEFATMRSLHDILHGRKGVQGAQPGPTLEWMQRVRVAVDA-----AKGLEY 230

Query: 224 LYGSAK-EFIPAEIRDT-VNIYEDKAAQV 250
           L+   +   I  +IR + V I+ED  A++
Sbjct: 231 LHEKVQPAVIHRDIRSSNVLIFEDFKAKI 259


>At2g41450 hypothetical protein
          Length = 991

 Score = 29.6 bits (65), Expect = 4.0
 Identities = 28/139 (20%), Positives = 56/139 (40%), Gaps = 9/139 (6%)

Query: 6   GVVEENVHLGLYHGTPSLRSSFTAQAIKTVSAWDNSSLSTGEFRYSLSTVPEELVDFAKQ 65
           G    ++  G    T +L ++  + A     +W   S+  G F    S +  +     K 
Sbjct: 368 GTTSTHIVTGKVRKTLNLCTALCSGAWIVSPSWLKESVREGRFANEASHILHDEDYQLKY 427

Query: 66  STEVSEPLVAPTVHPEAILSSTDITSGKIESVPSLIKGGNESLAATKASATEVFAGIN-- 123
            T++   ++     P ++L   DI  G     P++      S A  K++   V +G+N  
Sbjct: 428 DTDLKSTVLRAKARPNSLLKGYDICVG-----PNIELPIKTSSAIIKSAGGNVISGVNKG 482

Query: 124 --ETFSDSINKGENALRSS 140
             +TF  +++    ++R S
Sbjct: 483 KAKTFRIALSLAHGSVRVS 501


>At5g57610 putative protein
          Length = 1054

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 11/116 (9%)

Query: 15  GLYHGTPSLRSSFTAQAIKTVSAWDNSSLSTGEFRYSLSTVPEELVDFAKQSTEVSEPLV 74
           G+  G+P   S F   +     ++ N  L    F    + VP E      +  +V EPL 
Sbjct: 552 GVLVGSPQRISGFDGMSSLGQPSYPNPHLQDRAFPLDPNWVPSENPTVHNEHLQVREPLP 611

Query: 75  APTVHPEAILSSTDITSGKIESVPSLIKGGNESLAATKASATEVFAGINETFSDSI 130
            P       L  T++T+  I   P +      S+ +  A   E F  +N   S+ +
Sbjct: 612 GP-------LLQTNLTAAPIMQTPVM----QTSVESKLAQGGEQFNYVNTGISNGV 656


>At5g44560 unknown protein
          Length = 222

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 32/137 (23%), Positives = 57/137 (41%), Gaps = 18/137 (13%)

Query: 77  TVHPEAILSSTDITSGKIESVPSLIKGGNESLAATK------------ASATEVFAGINE 124
           T H +A+ +ST I+SG   +  +++   N+ +A TK            A        ++E
Sbjct: 86  TTHTQALYASTSISSGMKGATKAMV-AMNKQMAPTKQAKVIKDFQKQSAQLDMTIEMMSE 144

Query: 125 TFSDSINKGENALRSSVDTATSFIDSV---VKNATTSADNAFSKVFSAADQTGDLANKKI 181
              ++++K E A   + D     +D +   V +  +SA        +AA      A  K 
Sbjct: 145 AIDETLDKDE-AEEETEDLTNQVLDEIGVGVASQLSSAPKGRIATKTAAPPASTAATNK- 202

Query: 182 TSFSSEIDGVTSKAPGL 198
            S SSE+D +  +   L
Sbjct: 203 NSESSEVDELEKRLASL 219


>At2g36500 unknown protein (At2g36500)
          Length = 536

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 32/134 (23%), Positives = 56/134 (40%), Gaps = 16/134 (11%)

Query: 76  PTVHPEAILSSTDITSGKIESVPSLIKGGNESLAATKASATEVFAGINETFSDSINKGEN 135
           P V    +++  DIT    +++  + K   +  A   A     +   N  F D++   E 
Sbjct: 161 PVVENGEVIALLDITKCLYDAISRMEKAAEQGSALATAVEERHWGSGNFAFIDTLR--ER 218

Query: 136 ALRSSVDTATSFIDSVVKNATTSADNAFSKVFSAADQTGDL-ANKKITSFSSEIDGV-TS 193
             + ++ T       V +N   +  +A   VF A+ +  DL  N  I +  ++I G+ TS
Sbjct: 219 MFKPALSTI------VTENTKVALVSASDPVFVASKKMRDLRVNSVIIAVGNKIHGILTS 272

Query: 194 KAPGLVIDVLRRTV 207
           K      D+L R V
Sbjct: 273 K------DILMRVV 280


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.333    0.143    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,939,835
Number of Sequences: 26719
Number of extensions: 332538
Number of successful extensions: 1542
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1533
Number of HSP's gapped (non-prelim): 22
length of query: 494
length of database: 11,318,596
effective HSP length: 103
effective length of query: 391
effective length of database: 8,566,539
effective search space: 3349516749
effective search space used: 3349516749
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.5 bits)
S2: 62 (28.5 bits)


Medicago: description of AC146683.17