BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146651.13 - phase: 0
(274 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g34470 putative urease accessory protein 474 e-134
At1g80480 unknown protein 47 1e-05
At5g58120 resistance protein - like 40 0.001
At1g63750 putative disease resistance protein 40 0.001
At1g15730 PRLI-interacting factor L 40 0.002
At1g68100 unknown protein 39 0.003
At1g63740 disease resistance like protein 38 0.005
At3g10810 putative RING zinc finger protein 37 0.009
At2g46800 putative zinc transporter 37 0.009
At2g29410 putative zinc transporter 37 0.009
At1g63730 putative disease resistance protein 37 0.011
At5g63720 unknown protein 36 0.025
At3g63100 putative protein 36 0.025
At3g04220 putative disease resistance protein 35 0.033
At4g21450 unknown protein 35 0.057
At4g19500 resistence protein - like 35 0.057
At3g58810 zinc transporter -like protein 35 0.057
At1g05310 putative pectin methylesterase 34 0.074
At4g37270 Cu2+-transporting ATPase-like protein 34 0.097
At3g61940 zinc transporter-like protein 34 0.097
>At2g34470 putative urease accessory protein
Length = 275
Score = 474 bits (1221), Expect = e-134
Identities = 232/271 (85%), Positives = 248/271 (90%), Gaps = 8/271 (2%)
Query: 11 HDHDHHHHDHDHKHGDS--------FIGADGKVYHSHDGLAPHSHEPIYSPGFFSRRAQP 62
HDH HHHHDH+H H S ++G DGKVYHSHDGLAPHSHEPIYSPG+FSRRA P
Sbjct: 4 HDHHHHHHDHEHDHEKSDGGEGKASWVGKDGKVYHSHDGLAPHSHEPIYSPGYFSRRAPP 63
Query: 63 LINRDFNERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGEFLVKHK 122
L +R+F+ERAFTVGIGGPVGTGKTALMLALC+ LRD+YSLAAVTNDIFTKEDGEFLVK+
Sbjct: 64 LHDRNFSERAFTVGIGGPVGTGKTALMLALCRFLRDKYSLAAVTNDIFTKEDGEFLVKNG 123
Query: 123 ALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLYKADLLLCESGGDNLAANFSREL 182
ALPEERIRAVETGGCPHAAIREDISINLGPLEELSNL+KADLLLCESGGDNLAANFSREL
Sbjct: 124 ALPEERIRAVETGGCPHAAIREDISINLGPLEELSNLFKADLLLCESGGDNLAANFSREL 183
Query: 183 ADYIIYIIDVSGGDKIPRKGGPGITQADLLVINKTDLAQAIGADLGVMERDALRMRDGGP 242
ADYIIYIIDVS GDKIPRKGGPGITQADLLVINKTDLA A+GADL VMERD+LRMRDGGP
Sbjct: 184 ADYIIYIIDVSAGDKIPRKGGPGITQADLLVINKTDLAAAVGADLSVMERDSLRMRDGGP 243
Query: 243 FVFAQVKHNVGVEEIVNHVLQAWEAATGKKR 273
FVFAQVKH +GVEEIVNHV+ +WE ATGKKR
Sbjct: 244 FVFAQVKHGLGVEEIVNHVMHSWEHATGKKR 274
>At1g80480 unknown protein
Length = 444
Score = 47.0 bits (110), Expect = 1e-05
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 16/56 (28%)
Query: 5 GDHTHVHDHDHHH-HDHDHKHGDSFIGADGKVYHSHDG--LAPHSHEPIYSPGFFS 57
GDH H HDHDHHH H+HDH H H HDG HSH+ + PG S
Sbjct: 309 GDH-HDHDHDHHHDHNHDHDH------------HHHDGHDHHHHSHDHTHDPGVSS 351
Score = 33.1 bits (74), Expect = 0.16
Identities = 14/26 (53%), Positives = 15/26 (56%), Gaps = 2/26 (7%)
Query: 6 DHTHV--HDHDHHHHDHDHKHGDSFI 29
DH H HDH HH HDH H G S +
Sbjct: 327 DHHHHDGHDHHHHSHDHTHDPGVSSV 352
Score = 27.3 bits (59), Expect = 9.0
Identities = 42/164 (25%), Positives = 69/164 (41%), Gaps = 25/164 (15%)
Query: 77 IGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDGE-FLVKHKALPEERIRAVETG 135
I G +G+GKT L+ + RD AV + F + D + LV K++ E I +
Sbjct: 94 ITGFLGSGKTTLLNHILT--RDHGKRIAVIENEFGEVDIDGSLVASKSIGAEDI-VMLNN 150
Query: 136 GCPHAAIREDISINLGPLEELSNLYKADLLLCESGGDNLAAN-----------FSRELAD 184
GC +R D+ +G L K D ++ E+ G A F+ D
Sbjct: 151 GCLCCTVRGDLVRMIGELVNTKK-GKFDHIVIETTGLANPAPIIQTFYAEEEIFNDVKLD 209
Query: 185 YIIYIIDVSGG----DKIPRKGGPG-----ITQADLLVINKTDL 219
++ ++D D++ +G I AD +++NKTDL
Sbjct: 210 GVVTLVDAKHARLHLDEVKPEGVVNEAVEQIAYADRIIVNKTDL 253
>At5g58120 resistance protein - like
Length = 1046
Score = 40.0 bits (92), Expect = 0.001
Identities = 30/113 (26%), Positives = 48/113 (41%), Gaps = 11/113 (9%)
Query: 58 RRAQPLINRDFNERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDI---FTKED 114
++ Q L++ D+ + A VGI GP G GKT + AL L + L +I +
Sbjct: 196 QKMQSLLHLDYEDGAMIVGIYGPAGIGKTTIARALHSRLSSSFQLTCFMENIRGSYNSGL 255
Query: 115 GEFLVK--------HKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNL 159
E+ +K K L + IR G P + + I L +++L L
Sbjct: 256 DEYGLKLRLQEQLLSKVLNHDGIRINHLGAIPERLCDQKVLIILDDVDDLQQL 308
>At1g63750 putative disease resistance protein
Length = 1131
Score = 40.0 bits (92), Expect = 0.001
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 58 RRAQPLINRDFNERAFTVGIGGPVGTGKTALMLALCQNLRDRYSL 102
++ Q L+ D+ + A +GI GP G GK+ + AL L DR+ L
Sbjct: 199 KKIQSLLRLDYKDEALIIGISGPAGIGKSTIARALESRLSDRFQL 243
>At1g15730 PRLI-interacting factor L
Length = 448
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/44 (38%), Positives = 26/44 (58%), Gaps = 11/44 (25%)
Query: 6 DHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEP 49
DH H HD HH++H+H+H + + +HSHD H+H+P
Sbjct: 319 DHHHGHDCHDHHNEHEHEH-------EHEHHHSHD----HTHDP 351
>At1g68100 unknown protein
Length = 469
Score = 38.9 bits (89), Expect = 0.003
Identities = 14/26 (53%), Positives = 17/26 (64%)
Query: 2 ASGGDHTHVHDHDHHHHDHDHKHGDS 27
A GG H+H +DH +H HDH H DS
Sbjct: 166 AFGGGHSHSNDHHENHDHHDHSHSDS 191
Score = 33.1 bits (74), Expect = 0.16
Identities = 13/19 (68%), Positives = 14/19 (73%), Gaps = 1/19 (5%)
Query: 4 GGDHTHVHDHDHHHHDHDH 22
GG +H HDHD H HDHDH
Sbjct: 42 GGGCSHSHDHD-HDHDHDH 59
Score = 28.9 bits (63), Expect = 3.1
Identities = 9/12 (75%), Positives = 9/12 (75%)
Query: 7 HTHVHDHDHHHH 18
H H HDHDH HH
Sbjct: 49 HDHDHDHDHDHH 60
Score = 28.5 bits (62), Expect = 4.1
Identities = 9/11 (81%), Positives = 9/11 (81%)
Query: 6 DHTHVHDHDHH 16
DH H HDHDHH
Sbjct: 50 DHDHDHDHDHH 60
Score = 27.3 bits (59), Expect = 9.0
Identities = 11/21 (52%), Positives = 11/21 (52%), Gaps = 5/21 (23%)
Query: 9 HVHDHD-----HHHHDHDHKH 24
HVH H H HDHDH H
Sbjct: 37 HVHHHGGGCSHSHDHDHDHDH 57
>At1g63740 disease resistance like protein
Length = 992
Score = 38.1 bits (87), Expect = 0.005
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 59 RAQPLINRDFNERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDI 109
+ Q L++ D ++ A VGI GP G GKT + AL L DR+ L ++
Sbjct: 153 KIQSLLHLDNDDEAMIVGIYGPAGIGKTTIARALHSLLSDRFQLTCFMENL 203
>At3g10810 putative RING zinc finger protein
Length = 684
Score = 37.4 bits (85), Expect = 0.009
Identities = 18/50 (36%), Positives = 21/50 (42%), Gaps = 13/50 (26%)
Query: 7 HTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPH---SHEPIYSP 53
H H H H HHHH H H H +H H L+P P+ SP
Sbjct: 520 HHHHHHHHHHHHHHHHNHH----------HHHHHNLSPKMAPEVSPVASP 559
>At2g46800 putative zinc transporter
Length = 398
Score = 37.4 bits (85), Expect = 0.009
Identities = 19/53 (35%), Positives = 23/53 (42%), Gaps = 18/53 (33%)
Query: 4 GGDHTHVHDHDH-----------------HHHDHDHKHGDSFIGADGKVYHSH 39
G DH H H H H HHH HDH+HG S + K +H+H
Sbjct: 181 GHDHGHSHGHGHGHGHDHHNHSHGVTVTTHHHHHDHEHGHSHGHGEDK-HHAH 232
Score = 32.3 bits (72), Expect = 0.28
Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 15/47 (31%)
Query: 4 GGDHTHVHDHD-----------HHHHDHD----HKHGDSFIGADGKV 35
G H H HDH HHHHDH+ H HG+ A G V
Sbjct: 189 GHGHGHGHDHHNHSHGVTVTTHHHHHDHEHGHSHGHGEDKHHAHGDV 235
>At2g29410 putative zinc transporter
Length = 385
Score = 37.4 bits (85), Expect = 0.009
Identities = 13/22 (59%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
Query: 4 GGDHTHVH-DHDHHHHDHDHKH 24
G +H+H H DH HHHH+H H+H
Sbjct: 191 GHNHSHHHHDHHHHHHNHKHQH 212
Score = 33.1 bits (74), Expect = 0.16
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H H H HH+H H H+H
Sbjct: 197 HHHDHHHHHHNHKHQHQH 214
Score = 29.6 bits (65), Expect = 1.8
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 7 HTHVHDHDHHHHDHDHKH 24
H H H H +H H H H H
Sbjct: 199 HDHHHHHHNHKHQHQHHH 216
>At1g63730 putative disease resistance protein
Length = 966
Score = 37.0 bits (84), Expect = 0.011
Identities = 28/113 (24%), Positives = 48/113 (41%), Gaps = 11/113 (9%)
Query: 58 RRAQPLINRDFNERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDI---FTKED 114
++ Q L++ D + A VGI GP G GKT + AL L + L ++ +
Sbjct: 194 QKMQSLLHLDNEDEAMIVGICGPSGIGKTTIARALHSRLSSSFQLTCFMENLKGSYNSGL 253
Query: 115 GEFLVK--------HKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNL 159
E+ +K K L + +R G P +++ I L +++L L
Sbjct: 254 DEYGLKLCLQQQLLSKILNQNDLRIFHLGAIPERLCDQNVLIILDGVDDLQQL 306
>At5g63720 unknown protein
Length = 492
Score = 35.8 bits (81), Expect = 0.025
Identities = 13/42 (30%), Positives = 19/42 (44%)
Query: 9 HVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPI 50
H H H HHHH HD + ++ K +H H + P+
Sbjct: 370 HHHHHHHHHHHHDKEKPSAWNKLQSKFHHKHQEKSKERKRPM 411
>At3g63100 putative protein
Length = 199
Score = 35.8 bits (81), Expect = 0.025
Identities = 15/38 (39%), Positives = 17/38 (44%)
Query: 4 GGDHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDG 41
G H H H H H H DH+HG G +H H G
Sbjct: 95 GRGHGHGHGHGHRRHGRDHRHGRDRGHHRGHGHHHHRG 132
Score = 28.5 bits (62), Expect = 4.1
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 6 DHTHVHDHDHHHHDHDHKHG 25
DH H H + H H +H H G
Sbjct: 72 DHCHGHGYGHGHREHGHDRG 91
Score = 27.7 bits (60), Expect = 6.9
Identities = 9/19 (47%), Positives = 10/19 (52%)
Query: 7 HTHVHDHDHHHHDHDHKHG 25
H H + H H H HD HG
Sbjct: 75 HGHGYGHGHREHGHDRGHG 93
>At3g04220 putative disease resistance protein
Length = 896
Score = 35.4 bits (80), Expect = 0.033
Identities = 25/97 (25%), Positives = 43/97 (43%), Gaps = 6/97 (6%)
Query: 20 HDHKHGDSFIGADGKVYHSHDGLAPHS-----HEPIYSPGFFSRRAQPLINRDFNERAFT 74
+D + D+ G K+ + HS + + G + +PL++ D +E T
Sbjct: 202 YDSRKWDNESGMIEKIVSDISEMLNHSTPSRDFDDLIGMGDHMEKMKPLLDIDSDEMK-T 260
Query: 75 VGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFT 111
+GI GP G GKT + +L D++ L+ I T
Sbjct: 261 IGIWGPPGVGKTTIARSLYNQHSDKFQLSVFMESIKT 297
>At4g21450 unknown protein
Length = 295
Score = 34.7 bits (78), Expect = 0.057
Identities = 19/56 (33%), Positives = 27/56 (47%), Gaps = 5/56 (8%)
Query: 2 ASGGDHTHVHDHDHHHHDHDHKHGDSFIGADGKVYHSHDGLAPHSHEPIYSPGFFS 57
+S +H+H+H HHH H H+H +G +G DG + H P SP S
Sbjct: 46 SSSSTSSHLHNHHQHHHQHHHQHHHQ-LGYNGP---HGDGSGQNQH-PTPSPSVSS 96
Score = 28.1 bits (61), Expect = 5.3
Identities = 9/22 (40%), Positives = 12/22 (53%)
Query: 3 SGGDHTHVHDHDHHHHDHDHKH 24
SG + H H+HH H H+H
Sbjct: 43 SGASSSSTSSHLHNHHQHHHQH 64
>At4g19500 resistence protein - like
Length = 1239
Score = 34.7 bits (78), Expect = 0.057
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 11/100 (11%)
Query: 69 NERAFTVGIGGPVGTGKTALMLALCQNLRDRYSLAAVTNDIFTKEDG---------EFLV 119
+E+A VGI GP G GKT + AL L ++ L A T +D +FL
Sbjct: 201 SEKARMVGISGPSGIGKTTIAKALFSKLSPQFHLRAFVTYKRTNQDDYDMKLCWIEKFL- 259
Query: 120 KHKALPEERIRAVETGGCPHAAIREDISINLGPLEELSNL 159
+ L ++ ++ ++ G + + + + I L +++L L
Sbjct: 260 -SEILGQKDLKVLDLGAVEQSLMHKKVLIILDDVDDLELL 298
>At3g58810 zinc transporter -like protein
Length = 432
Score = 34.7 bits (78), Expect = 0.057
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Query: 4 GGDHTHVHDHDH---HHHDHDHKHG 25
G DH H H H H H H HDH HG
Sbjct: 236 GHDHGHGHGHSHDNGHGHSHDHGHG 260
Score = 31.2 bits (69), Expect = 0.63
Identities = 14/37 (37%), Positives = 15/37 (39%), Gaps = 7/37 (18%)
Query: 7 HTHVHDHDHHH---HDHDHKHGDSFIGADGKVYHSHD 40
H H H H H H H H H HG + H HD
Sbjct: 237 HDHGHGHGHSHDNGHGHSHDHGHGIAATE----HHHD 269
Score = 27.7 bits (60), Expect = 6.9
Identities = 11/22 (50%), Positives = 11/22 (50%), Gaps = 6/22 (27%)
Query: 7 HTHVHDHDH------HHHDHDH 22
H H HDH H HHHD H
Sbjct: 251 HGHSHDHGHGIAATEHHHDSGH 272
Score = 27.7 bits (60), Expect = 6.9
Identities = 12/28 (42%), Positives = 14/28 (49%), Gaps = 6/28 (21%)
Query: 6 DHTHVHDHDHHH------HDHDHKHGDS 27
D+ H H HDH H H HD H +S
Sbjct: 248 DNGHGHSHDHGHGIAATEHHHDSGHDES 275
Score = 27.7 bits (60), Expect = 6.9
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 6/33 (18%)
Query: 18 HDHDHKHGDSFIGADGKVYHSHD---GLAPHSH 47
HDH H HG S G HSHD G+A H
Sbjct: 237 HDHGHGHGHSHDNGHG---HSHDHGHGIAATEH 266
>At1g05310 putative pectin methylesterase
Length = 393
Score = 34.3 bits (77), Expect = 0.074
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Query: 6 DHTHVHDHDHHHHDHDHKHGDS 27
DH H H H HHHH H HK D+
Sbjct: 46 DHHH-HHHHHHHHHHRHKPSDT 66
>At4g37270 Cu2+-transporting ATPase-like protein
Length = 819
Score = 33.9 bits (76), Expect = 0.097
Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 5/25 (20%)
Query: 6 DHTHVHDHD-----HHHHDHDHKHG 25
DH H H HD H+HH H H+HG
Sbjct: 66 DHHHDHHHDDEQDHHNHHHHHHQHG 90
>At3g61940 zinc transporter-like protein
Length = 334
Score = 33.9 bits (76), Expect = 0.097
Identities = 13/23 (56%), Positives = 15/23 (64%), Gaps = 1/23 (4%)
Query: 4 GGDHTHVHDHDHHHHDHDHKHGD 26
G DH H HDH H HDH H +G+
Sbjct: 157 GHDHGHGHDHG-HSHDHGHSYGE 178
Score = 30.0 bits (66), Expect = 1.4
Identities = 11/19 (57%), Positives = 12/19 (62%), Gaps = 1/19 (5%)
Query: 11 HDHDH-HHHDHDHKHGDSF 28
HDH H H H H H HG S+
Sbjct: 158 HDHGHGHDHGHSHDHGHSY 176
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.139 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,689,812
Number of Sequences: 26719
Number of extensions: 297699
Number of successful extensions: 1832
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 1329
Number of HSP's gapped (non-prelim): 240
length of query: 274
length of database: 11,318,596
effective HSP length: 98
effective length of query: 176
effective length of database: 8,700,134
effective search space: 1531223584
effective search space used: 1531223584
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Medicago: description of AC146651.13