BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146590.2 + phase: 0
(313 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g04020 pathogen-induced calmodulin-binding protein (PICBP) 30 1.7
At5g58190 unknown protein 29 2.9
At2g10440 hypothetical protein 29 2.9
At2g26460 unknown protein 29 3.8
At4g20850 putative protein 28 4.9
At2g23000 putative serine carboxypeptidase I 28 4.9
At1g18800 unknown protein 28 4.9
At2g04970 putative protein on transposon FARE2.9 28 6.4
At1g76740 hypothetical protein 28 6.4
>At5g04020 pathogen-induced calmodulin-binding protein (PICBP)
Length = 1495
Score = 30.0 bits (66), Expect = 1.7
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 15 IDDNGIRRELPEETYTPHERDQVQKRDVSSSQDNEEVELHSYGAVE 60
++DN + LPEET E +++++ +S D E++EL+ AVE
Sbjct: 1319 MEDNEKNQTLPEETRKEEEEEELKE---DTSVDGEKMELYQTEAVE 1361
>At5g58190 unknown protein
Length = 528
Score = 29.3 bits (64), Expect = 2.9
Identities = 23/89 (25%), Positives = 35/89 (38%), Gaps = 4/89 (4%)
Query: 189 SNEAYLFRGGHYALINYSSKRLIHIETIRHGFPS---LIGTVFENGLEAAFASHGTKEAY 245
++ AY+ G Y NYS + T +P ++G N + A G +
Sbjct: 163 TSAAYMIPYGQYGGGNYSGNQGDISLTSHIPYPQTMGILGPYDHNASQVALHGSGVASSS 222
Query: 246 LFKGEYYANIYYAPGSTDDYL-IGGRVKL 273
G Y+ Y P ST Y + RV+L
Sbjct: 223 SLGGYYHVGSYQNPSSTPSYYGVDNRVRL 251
>At2g10440 hypothetical protein
Length = 935
Score = 29.3 bits (64), Expect = 2.9
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 28 TYTPHERDQVQKRDVSSSQDNEEVELHSYGAVEN 61
T P+ RDQ VSSSQ N V LH+ +N
Sbjct: 173 TSRPNNRDQQGAFQVSSSQQNNNVTLHAMSQQKN 206
>At2g26460 unknown protein
Length = 585
Score = 28.9 bits (63), Expect = 3.8
Identities = 20/63 (31%), Positives = 30/63 (46%), Gaps = 3/63 (4%)
Query: 21 RRELPEETYTPHERDQVQKRDVSSSQDNEEVELHSYGAVE---NIPIYINAAFRASANNE 77
R E EE+ P RD+ ++R + + D + EL S+ AV + I A + S N
Sbjct: 16 REEKLEESDNPKYRDRAKERRENQNPDYDPSELSSFHAVAPPGAVDIRAADALKISIENS 75
Query: 78 AYL 80
YL
Sbjct: 76 KYL 78
>At4g20850 putative protein
Length = 1396
Score = 28.5 bits (62), Expect = 4.9
Identities = 39/176 (22%), Positives = 64/176 (36%), Gaps = 26/176 (14%)
Query: 149 APGTTNDKILSGPMKITDMFPFFKDTVFERGLDAAFRAHSSNEAYLFRGGHYALINYSSK 208
AP + L K+ + K V + +DA + S+ L G + + K
Sbjct: 910 APIKVEAEALLASEKLVPIAVLNKIRVPYQPIDAQLKTLSTGRDRLLSGKQILALTLTYK 969
Query: 209 -RLIHIETIRHGFPSLIGTVFENGLEAAF--ASHGTKEAY-----------LFKGEYYAN 254
+L ++ P L +++ E+ F S K Y L KGEY
Sbjct: 970 FKLEDSAEVKPYIPLLNNRIYDTKFESQFFMISDTNKRVYAMGDVYPESSKLPKGEYKLQ 1029
Query: 255 IYYAPGSTDDYLIGGRVKLILSNWPSLKKILPRNNG--RLDLHTHKDHPDEDNGSY 308
+Y + + +L L + RN G RL+LH+ D P NG++
Sbjct: 1030 LYLRHENVE----------LLEKLKQLTVFIERNMGEIRLNLHSEPDGPFTGNGAF 1075
>At2g23000 putative serine carboxypeptidase I
Length = 437
Score = 28.5 bits (62), Expect = 4.9
Identities = 19/49 (38%), Positives = 26/49 (52%), Gaps = 4/49 (8%)
Query: 109 DGYPSLARTPFGEHGIDCAFDTDKTQAYIFSANLCALIDYAPGTTNDKI 157
+GY SL + G+H I F TQA+I S N + D+ P ND+I
Sbjct: 350 NGYRSLIYS--GDHDITMPFQA--TQAWIKSLNYSIVDDWRPWMINDQI 394
>At1g18800 unknown protein
Length = 256
Score = 28.5 bits (62), Expect = 4.9
Identities = 13/36 (36%), Positives = 19/36 (52%)
Query: 16 DDNGIRRELPEETYTPHERDQVQKRDVSSSQDNEEV 51
+ NG +R LPEE++ D K DV +E+V
Sbjct: 168 EKNGNKRALPEESFFTWFSDAQHKEDVEDEMQDEQV 203
>At2g04970 putative protein on transposon FARE2.9
Length = 457
Score = 28.1 bits (61), Expect = 6.4
Identities = 15/43 (34%), Positives = 23/43 (52%), Gaps = 6/43 (13%)
Query: 268 GGRVKLILSNWPSLKKILPRNNGRLDL------HTHKDHPDED 304
G +VKL+ NW LKK + R G L + +T ++ +ED
Sbjct: 383 GEKVKLVYENWEVLKKKVGRLEGYLGIERVPASYTREEQKEED 425
>At1g76740 hypothetical protein
Length = 1532
Score = 28.1 bits (61), Expect = 6.4
Identities = 11/33 (33%), Positives = 23/33 (69%)
Query: 21 RRELPEETYTPHERDQVQKRDVSSSQDNEEVEL 53
R++L E Y P+ R+ ++ + ++S++N+ VEL
Sbjct: 1044 RQQLFYECYVPNVREDSERDEAATSEENKAVEL 1076
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.139 0.418
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,760,619
Number of Sequences: 26719
Number of extensions: 351590
Number of successful extensions: 640
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 637
Number of HSP's gapped (non-prelim): 9
length of query: 313
length of database: 11,318,596
effective HSP length: 99
effective length of query: 214
effective length of database: 8,673,415
effective search space: 1856110810
effective search space used: 1856110810
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)
Medicago: description of AC146590.2