BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146568.5 - phase: 0 
         (297 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At5g24090 acidic endochitinase (dbj|BAA21861.1)                       378  e-105
At4g22890 unknown protein                                              29  3.5
At4g19800 chitinase - like protein                                     29  3.5
At5g61620 transcriptional activator - like protein                     28  5.9
At4g27830 beta-glucosidase like protein                                28  5.9
At1g03090 putative 3-methylcrotonyl-CoA carboxylase                    28  7.8

>At5g24090 acidic endochitinase (dbj|BAA21861.1)
          Length = 302

 Score =  378 bits (971), Expect = e-105
 Identities = 180/295 (61%), Positives = 219/295 (74%), Gaps = 3/295 (1%)

Query: 6   KSTISFTFFSLLVLALANGSNAGKIAIYWGQNGNEGTLAEACATGNYEYVIIAFLPTFGD 65
           K  I F FF    L+  + ++ G IAIYWGQNGNEG L+  CATG Y YV +AFL  FG+
Sbjct: 8   KHVIYFLFFISCSLSKPSDASRGGIAIYWGQNGNEGNLSATCATGRYAYVNVAFLVKFGN 67

Query: 66  GQTPMINLAGHCDPYSNGCTGLSSDIKSCQAKGIKVLLSIGGGAGSYSIASTKDANSVAT 125
           GQTP +NLAGHC+P +N CT   S +K CQ++GIKV+LS+GGG G+YSI S +DA  +A 
Sbjct: 68  GQTPELNLAGHCNPAANTCTHFGSQVKDCQSRGIKVMLSLGGGIGNYSIGSREDAKVIAD 127

Query: 126 YLWNNFLGGKSSSRPLGPAVLDGIDFDIEGGSSQHWGDLARYLKGFN---KKVYITAAPQ 182
           YLWNNFLGGKSSSRPLG AVLDGIDF+IE GS QHW DLAR L  F+   +K+Y+T APQ
Sbjct: 128 YLWNNFLGGKSSSRPLGDAVLDGIDFNIELGSPQHWDDLARTLSKFSHRGRKIYLTGAPQ 187

Query: 183 CPFPDAWIGNALTTGLFDYVWVQFYNNPPCQYNPDAFMNFEDAWKQWTSGIPANKIFLGL 242
           CPFPD  +G+AL T  FDYVW+QFYNNPPC Y+     N  D+W +WT+ I A K FLGL
Sbjct: 188 CPFPDRLMGSALNTKRFDYVWIQFYNNPPCSYSSGNTQNLFDSWNKWTTSIAAQKFFLGL 247

Query: 243 PASPTAAGSGFISADDLTSTVLPVIKGSSKYGGVMLWSRYDDVQSGYSSSIKSHV 297
           PA+P AAGSG+I  D LTS +LP +K S KYGGVMLWS++ D ++GYSSSI + V
Sbjct: 248 PAAPEAAGSGYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSSSILASV 302


>At4g22890 unknown protein
          Length = 324

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 8/70 (11%)

Query: 228 QWTSGIPANKIFLG-----LPASPTAAGSGFISADDLTSTVLP---VIKGSSKYGGVMLW 279
           QWT   P   I L      LPA  T   SG +  D++ S VLP   + K   K  G M  
Sbjct: 38  QWTQLSPGKSISLRRRVFLLPAKATTEQSGPVGGDNVDSNVLPYCSINKAEKKTIGEMEQ 97

Query: 280 SRYDDVQSGY 289
                +QS Y
Sbjct: 98  EFLQALQSFY 107


>At4g19800 chitinase - like protein
          Length = 398

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 43/174 (24%), Positives = 68/174 (38%), Gaps = 36/174 (20%)

Query: 99  IKVLLSIGGG-AGSYSIAS-TKDANSVATYLWNNFLGGKSSSRPLGPAVLDGIDFDIE-G 155
           +K LLSIGGG A   + AS   + +S A+++ +     +S           G+D D E  
Sbjct: 69  VKTLLSIGGGNADKDAFASMASNPDSRASFIQSTITVARSYG-------FHGLDLDWEYP 121

Query: 156 GSSQHWGDLARYLKGFNKKV------------YITAA-------PQCPFPDAWIGNAL-- 194
            + +   D  + L+ +   V             +TAA          P+P   I N+L  
Sbjct: 122 RNEEEMYDFGKLLEEWRSAVEAESNSSGTTALILTAAVYYSSNYQGVPYPVLAISNSLDW 181

Query: 195 -TTGLFDYV---WVQFYNNPPCQYNPDAFMNFEDAWKQWT-SGIPANKIFLGLP 243
                +D+    W      P   Y P    + +   + WT +G+PA K  LG P
Sbjct: 182 INLMAYDFYGPGWSTVTGPPASLYLPTDGRSGDSGVRDWTEAGLPAKKAVLGFP 235


>At5g61620 transcriptional activator - like protein
          Length = 317

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 7/77 (9%)

Query: 206 FYNNPPCQYNPDAFMNFEDAWKQ----WTSGIPANK-IFLGLPASPTAAGSGFISAD--D 258
           +YN PP  Y+P+  M + +          SGIP  + I +GLP S  +  S   + D  D
Sbjct: 234 YYNFPPIMYHPNYPMYYANPQVPVRFVHPSGIPVPRHIPIGLPLSQPSEASNMTNKDGLD 293

Query: 259 LTSTVLPVIKGSSKYGG 275
           L   + P   G+S   G
Sbjct: 294 LHIGLPPQATGASDLTG 310


>At4g27830 beta-glucosidase like protein
          Length = 508

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 25/98 (25%), Positives = 39/98 (39%), Gaps = 23/98 (23%)

Query: 197 GLFDYVWVQFYNNPPCQYNPDAFMNFEDAWKQWTSGIPANKIFLGLPASPTAAGSGFISA 256
           G+ +Y+  Q YNNPP     +      D+  Q T  I   + ++G               
Sbjct: 380 GILEYI-KQSYNNPPIYILENGMPMGRDSTLQDTQRIEFIQAYIG--------------- 423

Query: 257 DDLTSTVLPVIKGSSKYGGVMLWSRYD--DVQSGYSSS 292
                 +L  IK  S   G  +WS  D  ++ SGY++S
Sbjct: 424 -----AMLNAIKNGSDTRGYFVWSMIDLYELLSGYTTS 456


>At1g03090 putative 3-methylcrotonyl-CoA carboxylase
          Length = 734

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 206 FYNNPPCQYNPDAFMNFEDAWKQWTSGIPANKIFLGLPASP 246
           +Y+NPP + + +A    E  W     G  +N I LG+   P
Sbjct: 534 WYSNPPFRVHHEAKQTIELEWNNECEGTGSNLISLGVRYQP 574


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.317    0.136    0.426 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,477,662
Number of Sequences: 26719
Number of extensions: 341891
Number of successful extensions: 680
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 677
Number of HSP's gapped (non-prelim): 6
length of query: 297
length of database: 11,318,596
effective HSP length: 99
effective length of query: 198
effective length of database: 8,673,415
effective search space: 1717336170
effective search space used: 1717336170
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)