Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146567.12 + phase: 0 /pseudo
         (307 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g13820 hypothetical protein                                        335  2e-92
At5g39220 unknown protein                                             285  2e-77
At4g36530 unknown protein                                              75  6e-14
At5g38520 unknown protein                                              49  3e-06
At5g19850 unknown protein                                              46  3e-05
At4g12830 hydrolase like protein                                       46  3e-05
At3g29770 alpha/beta hydrolase, putative                               45  6e-05
At5g09430 putative hydrolase                                           44  1e-04
At4g09900 putative host response protein                               44  1e-04
At1g69240 alpha/beta hydrolase like protein                            44  1e-04
At1g52510 unknown protein (At1g52510)                                  42  5e-04
At1g33990 unknown protein                                              42  5e-04
At1g26360 hypothetical protein                                         41  7e-04
At4g24160 unknown protein                                              40  0.002
At4g25290 hypothetical protein                                         39  0.005
At3g10840 alpha/beta hydrolase like protein                            39  0.005
At5g21950 unknown protein                                              37  0.010
At4g15960 unknown protein                                              37  0.013
At3g51000 epoxide hydrolase-like protein                               37  0.018
At1g78210 unknown protein                                              36  0.030

>At1g13820 hypothetical protein
          Length = 339

 Score =  335 bits (859), Expect = 2e-92
 Identities = 159/214 (74%), Positives = 183/214 (85%), Gaps = 4/214 (1%)

Query: 12  FKVVAETDADSFPSFLPKDVNRIKDPFARTLATRIQRLPVSVKFSENPIMSSCVKPLVQN 71
           FKV AE     FP+FLP DV +IKD FA  LA RI+RLPVSV F E+ IMSSCV PL++N
Sbjct: 25  FKVTAE----KFPTFLPTDVEKIKDTFALKLAARIERLPVSVSFREDSIMSSCVTPLMRN 80

Query: 72  KENPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSKREHF 131
           +  P+VLLHGFDSSCLEWRYTYPLLEEAG+ETWA DILGWGFSDL+KLP CDV SKREHF
Sbjct: 81  ETTPVVLLHGFDSSCLEWRYTYPLLEEAGLETWAFDILGWGFSDLDKLPPCDVASKREHF 140

Query: 132 YQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTEGTGNLATLPRAA 191
           Y+FWKS+IK+P++LVGPSLG+AVAID A+N+PEAVE LVL+DASVY EGTGNLATLP+AA
Sbjct: 141 YKFWKSHIKRPVVLVGPSLGAAVAIDIAVNHPEAVESLVLMDASVYAEGTGNLATLPKAA 200

Query: 192 AYAGVYLLKSVPLRVYANYLSFTNISFSTSLDWT 225
           AYAGVYLLKS+PLR+Y N++ F  IS  TS DWT
Sbjct: 201 AYAGVYLLKSIPLRLYVNFICFNGISLETSWDWT 234


>At5g39220 unknown protein
          Length = 330

 Score =  285 bits (729), Expect = 2e-77
 Identities = 137/228 (60%), Positives = 172/228 (75%), Gaps = 3/228 (1%)

Query: 12  FKVVAETDADSFPSFLPKDVNRIKDPFARTLATRIQRLPVSVKFSE--NPIMSSCVKPLV 69
           F+     + D FP+FLPK++  IKDPFAR LA RI R+PV ++       +MSSC+KPLV
Sbjct: 17  FRQRVTANGDGFPTFLPKEIQNIKDPFARALAQRIVRIPVPLQMGNFRGSVMSSCIKPLV 76

Query: 70  Q-NKENPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSKR 128
           Q + ++P+VLLH FDSSCLEWR TYPLLE+A +ETWAID+LGWGFSDLEKLP CD  SKR
Sbjct: 77  QLHDKSPVVLLHCFDSSCLEWRRTYPLLEQACLETWAIDVLGWGFSDLEKLPPCDAASKR 136

Query: 129 EHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTEGTGNLATLP 188
            H ++ WK+YIK+PMILVGPSLG+ VA+DF   YPEAV+KLVLI+A+ Y+EGTG L  LP
Sbjct: 137 HHLFELWKTYIKRPMILVGPSLGATVAVDFTATYPEAVDKLVLINANAYSEGTGRLKELP 196

Query: 189 RAAAYAGVYLLKSVPLRVYANYLSFTNISFSTSLDWTNATMLLRR*KW 236
           ++ AYAGV LLKS PLR+ AN L+F +   S ++DWTN   L  +  W
Sbjct: 197 KSIAYAGVKLLKSFPLRLLANVLAFCSSPLSENIDWTNIGRLHCQMPW 244


>At4g36530 unknown protein
          Length = 378

 Score = 74.7 bits (182), Expect = 6e-14
 Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 2/108 (1%)

Query: 68  LVQNKENPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSK 127
           +VQ + +P+VL+HGF +S   WRY  P L +   + +A+D+LG+G+SD + L   D +  
Sbjct: 94  VVQGEGSPLVLIHGFGASVFHWRYNIPELAKK-YKVYALDLLGFGWSD-KALIEYDAMVW 151

Query: 128 REHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDAS 175
            +    F K  +K+P ++VG SLG   A+  A+  PE V  + L++++
Sbjct: 152 TDQVIDFMKEVVKEPAVVVGNSLGGFTALSVAVGLPEQVTGVALLNSA 199


>At5g38520 unknown protein
          Length = 362

 Score = 48.9 bits (115), Expect = 3e-06
 Identities = 34/101 (33%), Positives = 55/101 (53%), Gaps = 2/101 (1%)

Query: 76  IVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSKREHFYQFW 135
           ++L+HGF +S   WR     L +     +AID+LG+G SD     S  + S  E    F 
Sbjct: 93  VLLVHGFGASIPHWRRNINALSK-NHTVYAIDLLGFGASDKPPGFSYTMESWAELILNFL 151

Query: 136 KSYIKKPMILVGPSLGS-AVAIDFAINYPEAVEKLVLIDAS 175
           +  ++KP IL+G S+GS A  I  + +  + V+ LVL++ +
Sbjct: 152 EEVVQKPTILIGNSVGSLACVIAASESRGDLVKGLVLLNCA 192


>At5g19850 unknown protein
          Length = 359

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 7/107 (6%)

Query: 76  IVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKL------PSCDVVSKRE 129
           +VL+HGF ++   WR   P+L +     ++ID++G+G+SD          P     +  E
Sbjct: 97  LVLVHGFGANSDHWRKNTPILGKTH-RVYSIDLIGYGYSDKPNPREFGGEPFYTFETWGE 155

Query: 130 HFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASV 176
               F    +K     +  S+G  V +  A++ PE    L+LI+ S+
Sbjct: 156 QLNDFCLDVVKDEAFFICNSIGGLVGLQAAVSKPEICRGLMLINISL 202


>At4g12830 hydrolase like protein
          Length = 393

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 18/141 (12%)

Query: 75  PIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEK------LPSCDVVSKR 128
           P++L+HGF S    +R T P+L +      A D LG+GFSD  +          + VS  
Sbjct: 135 PVILIHGFPSQAYSYRKTIPVLSK-NYRAIAFDWLGFGFSDKPQAGYGFNYTMDEFVSSL 193

Query: 129 EHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTEGTGNLATLP 188
           E F           + LV     SA  + +A N P+ ++ L+L++  +    T   A LP
Sbjct: 194 ESFID---EVTTSKVSLVVQGYFSAAVVKYARNRPDKIKNLILLNPPL----TPEHAKLP 246

Query: 189 RAAAYAGVYLLKSV----PLR 205
              +    +LL  +    PLR
Sbjct: 247 STLSVFSNFLLGEIFSQDPLR 267


>At3g29770 alpha/beta hydrolase, putative
          Length = 390

 Score = 44.7 bits (104), Expect = 6e-05
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 23/147 (15%)

Query: 74  NPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLE----------KLPSCD 123
           N  VL+HG       W  T  LLEE G +  AID+ G G + +             P  D
Sbjct: 137 NHFVLVHGGSFGAWCWYKTIALLEEDGFKVTAIDLAGCGINSININGIASLSQYVKPLTD 196

Query: 124 VVSKREHFYQFWKSYIKKPMILVGPSLGSAVAIDFAIN-YPEAVEKLVLIDASVYTEGTG 182
           ++ K           I + +ILVG   G A  I +A+  +P  + K V + A++ T G  
Sbjct: 197 ILEKLP---------IGEKVILVGHDFGGA-CISYAMELFPSKISKAVFLAAAMLTNGQS 246

Query: 183 NLATLPRAAAYAGVYLLKSVPLRVYAN 209
            L      A      L++   + +Y N
Sbjct: 247 TLDMFSLKAGQND--LMRKAQIFIYTN 271


>At5g09430 putative hydrolase
          Length = 303

 Score = 43.9 bits (102), Expect = 1e-04
 Identities = 36/118 (30%), Positives = 56/118 (46%), Gaps = 4/118 (3%)

Query: 64  CVKPLVQNKENP-IVLLHGFDSSCLEWRYTYPLLEEAG-IETWAIDILGWGFSDLEKLPS 121
           C  P   N+  P ++LLHGF ++ + W+Y   L    G    +  D+L +G S   + P+
Sbjct: 50  CWIPKSPNRSKPNLLLLHGFGANAM-WQYGEHLRAFTGRFNVYVPDLLFFGLSSTSE-PN 107

Query: 122 CDVVSKREHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTE 179
                +     +  +++  + M +VG S G  V    A  +PE VEKLVL  A V  E
Sbjct: 108 RTESFQARCLMRLMEAHGVQRMNIVGISYGGFVGYSLAAQFPENVEKLVLCCAGVCLE 165


>At4g09900 putative host response protein
          Length = 256

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 32/109 (29%), Positives = 51/109 (46%), Gaps = 9/109 (8%)

Query: 77  VLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSKREHFYQFWK 136
           VL+HG       W  T   LEE+G+    +D+ G GF+    +   + VS  E + +   
Sbjct: 7   VLVHGEGFGAWCWYKTIASLEESGLSPVTVDLAGSGFN----MTDANSVSTLEEYSKPLI 62

Query: 137 SYI-----KKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTEG 180
             I     ++ +ILVG S G A        +PE + K + I A++ T+G
Sbjct: 63  ELIQNLPAEEKVILVGHSTGGACVSYALERFPEKISKAIFICATMVTDG 111


>At1g69240 alpha/beta hydrolase like protein
          Length = 444

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 41/136 (30%), Positives = 57/136 (41%), Gaps = 6/136 (4%)

Query: 77  VLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFS--DLEKLPS-CDVVSKREHFYQ 133
           VL+HG       W  T  LLE+ G +  A+D+ G G S  D   + S    V    HF+ 
Sbjct: 189 VLVHGGGFGAWCWYKTITLLEKHGFQVDAVDLTGSGVSSFDTNNITSLAQYVKPLLHFFD 248

Query: 134 FWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTEGTGNLATLPRAAAY 193
             K   K  +ILVG   G A        YP  + K + I A++       L  L      
Sbjct: 249 TLKPTEK--VILVGHDFGGACMSYAMEMYPSKIAKAIFISAAMLANAQSTL-DLFNQQPD 305

Query: 194 AGVYLLKSVPLRVYAN 209
           +   L++ V L +YAN
Sbjct: 306 SNYDLMEQVHLFLYAN 321


>At1g52510 unknown protein (At1g52510)
          Length = 380

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 29/110 (26%), Positives = 53/110 (47%), Gaps = 5/110 (4%)

Query: 70  QNKENPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSKRE 129
           +++   IV +HG  +    +R     L +AG   +A D +G+GFSD  +       +++E
Sbjct: 122 ESRRGTIVFVHGAPTQSFSYRTVMSELSDAGFHCFAPDWIGFGFSDKPQPGYGFNYTEKE 181

Query: 130 HFYQFWKSY----IKKPMILVGPS-LGSAVAIDFAINYPEAVEKLVLIDA 174
           +   F K      +K P  LV    L  +  + +A+  P  VEKL ++++
Sbjct: 182 YHEAFDKLLEVLEVKSPFFLVVQGFLVGSYGLTWALKNPSKVEKLAILNS 231


>At1g33990 unknown protein
          Length = 348

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 37/147 (25%), Positives = 69/147 (46%), Gaps = 14/147 (9%)

Query: 40  RTLATRIQRLPVSVKFSENPIMSSCVKPLVQNKENPIVLLHGFDSSCLEWRYTYPLLEEA 99
           R  +T  ++  +S  FS    +    + L+  K    VL+HG       W      LEE+
Sbjct: 65  RVGSTSTRKRTLSDPFSNGKQVPDFSESLIVKK---FVLVHGEGFGAWCWYKMVASLEES 121

Query: 100 GIETWAIDILGWGFSDLEKLPSCDVVSKREHFYQFWKSYI-----KKPMILVGPSLGSAV 154
           G+    +D+ G GF+    +   + VS  E + +     +     ++ +ILVG S G A 
Sbjct: 122 GLSPVTVDLTGCGFN----MTDTNTVSTLEEYSKPLIDLLENLPEEEKVILVGHSTGGA- 176

Query: 155 AIDFAI-NYPEAVEKLVLIDASVYTEG 180
           +I +A+  +PE + K + + A++ ++G
Sbjct: 177 SISYALERFPEKISKAIFVCATMVSDG 203


>At1g26360 hypothetical protein
          Length = 554

 Score = 41.2 bits (95), Expect = 7e-04
 Identities = 35/111 (31%), Positives = 49/111 (43%), Gaps = 5/111 (4%)

Query: 77  VLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFS--DLEKLPSCDVVSK-REHFYQ 133
           VL+HG       W  T  LLE+ G +  A+++ G G S  D   + S    SK   HF++
Sbjct: 188 VLVHGGGFGAWCWYKTITLLEKHGFQVDAVELTGSGVSSIDTNNITSLAHYSKPLLHFFE 247

Query: 134 FWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTEGTGNL 184
             K   K  +ILVG   G A        +P  + K V I A++   G   L
Sbjct: 248 SLKPTEK--VILVGHDFGGACMSYAMEMFPTKIAKAVFISAAMLANGQSTL 296


>At4g24160 unknown protein
          Length = 418

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 30/108 (27%), Positives = 53/108 (48%), Gaps = 7/108 (6%)

Query: 76  IVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSKRE-----H 130
           +V++HG+ +S   +   +  L        AID LGWG S      +C    + E      
Sbjct: 123 LVMVHGYGASQGFFFRNFDALASR-FRVIAIDQLGWGGSSRPDF-TCRSTEETEAWFIDS 180

Query: 131 FYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYT 178
           F ++ K+      IL+G S G  VA  +A+ +PE V+ L+L+ ++ ++
Sbjct: 181 FEEWRKAQNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGSAGFS 228


>At4g25290 hypothetical protein
          Length = 581

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)

Query: 68  LVQNKENPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPSCDVVSK 127
           +V N+   ++L+HGF +    +R     +  +    W I +LG+G S+   +   +++  
Sbjct: 338 VVGNEGPAVLLVHGFGAFLEHYRDNVDNIVNSKNRVWTITVLGFGKSEKPNIIYTELL-W 396

Query: 128 REHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDAS 175
            E    F    + +P   VG S+G       A  +P  V+ +VL++++
Sbjct: 397 AELLRDFMAEVVGEPAHCVGNSIGGYFVALMAFLWPALVKSVVLVNSA 444


>At3g10840 alpha/beta hydrolase like protein
          Length = 429

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 32/116 (27%), Positives = 46/116 (39%), Gaps = 13/116 (11%)

Query: 75  PIVLLHGFDSSCLEW-RYTYPLLEEAGIETWAIDILGWGFS------------DLEKLPS 121
           P++LLHGF +S   W R   PL      +  A D   +G +            D + L  
Sbjct: 95  PMILLHGFGASVFSWNRVMKPLARLVSSKVLAFDRPAFGLTSRIFHPFSGATNDAKPLNP 154

Query: 122 CDVVSKREHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVY 177
             +V        F         ILVG S G  VA+D     PE V  L+L+  +++
Sbjct: 155 YSMVYSVLTTLYFIDVLAADKAILVGHSAGCPVALDAYFEAPERVAALILVAPAIF 210


>At5g21950 unknown protein
          Length = 220

 Score = 37.4 bits (85), Expect = 0.010
 Identities = 43/163 (26%), Positives = 75/163 (45%), Gaps = 19/163 (11%)

Query: 70  QNKENP-IVLLHGFDSSCLEWRYTYPLLEEAGI-ETWAIDILGWGFSDLEKLPSCDVVSK 127
           +N + P ++LLHGF  S + W++++ +   +     +  D++ +G S      S    ++
Sbjct: 50  ENTQKPSLLLLHGFGPSAV-WQWSHQVKPLSHFFRLYVPDLVFFGGS------SSSGENR 102

Query: 128 REHFYQFWKSYIKKPM-----ILVGPSLGSAVAIDFAINYPEAVEKLVLIDASVYTEGTG 182
            E F       + + +      +VG S G  VA + A  +PE VEK+VL  + V    + 
Sbjct: 103 SEMFQALCMGKLMEKLEVERFSVVGTSYGGFVAYNMAKMFPEKVEKVVLASSGVNLRRSD 162

Query: 183 NLATLPRAAAYAGVYLLKSVPLRVYANYL-SFTNISFSTSLDW 224
           N A + RA  +     +K V L   A  L  F+ +  S  LD+
Sbjct: 163 NEAFIARAKCHR----IKEVMLPASATDLRRFSGMVSSKRLDY 201


>At4g15960 unknown protein
          Length = 375

 Score = 37.0 bits (84), Expect = 0.013
 Identities = 31/109 (28%), Positives = 49/109 (44%), Gaps = 4/109 (3%)

Query: 66  KPLVQNKENPIVL-LHGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDL-EKLPSCD 123
           KP   + E+PI+L LHGF      WR+    L   G  T A D+ G+G ++  EK+    
Sbjct: 71  KPGSGSGEDPIILFLHGFPELWYTWRHQMVALSSLGYRTIAPDLRGYGDTEAPEKVEDYT 130

Query: 124 VVSKREHFYQFWKSYI--KKPMILVGPSLGSAVAIDFAINYPEAVEKLV 170
           ++ +         +     K + +VG   G+ +A       PE V+ LV
Sbjct: 131 LLKRGRSVVALIVAVTGGDKAVSVVGHDWGAMIAWQLCQYRPEKVKALV 179


>At3g51000 epoxide hydrolase-like protein
          Length = 323

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 24/72 (33%), Positives = 34/72 (46%), Gaps = 13/72 (18%)

Query: 71  NKENPIVLL-HGFDSSCLEWRYTYPLLEEAGIETWAIDILGWGFSDLEKLPS-------- 121
           ++E P+VLL HGF  +   WR+    L   G    A D+ G+G SD   LPS        
Sbjct: 24  DEEGPLVLLLHGFPETWYSWRHQIDFLSSHGYHVVAPDLRGYGDSD--SLPSHESYTVSH 81

Query: 122 --CDVVSKREHF 131
              DV+   +H+
Sbjct: 82  LVADVIGLLDHY 93


>At1g78210 unknown protein
          Length = 314

 Score = 35.8 bits (81), Expect = 0.030
 Identities = 33/133 (24%), Positives = 58/133 (42%), Gaps = 5/133 (3%)

Query: 50  PVSVKFSENPIMS---SCVKPLVQNKENPIVLLHGFDSSCLEWRYTYPLLEEAGIETWAI 106
           PV++   +  +++   S  KP  + K N ++L+HG  ++ +   Y            +  
Sbjct: 26  PVTIDLKDGTVVNFWVSKTKPESKPKPN-LLLIHGLGATAIWQWYDVARRLSRYFNLYIP 84

Query: 107 DILGWGFSDLEKLPSCDVVSKREHFYQFWKSYIKKPMILVGPSLGSAVAIDFAINYPEAV 166
           D++ +G S   +    D+   +          +KK   LVG S G  V    A  Y +AV
Sbjct: 85  DLVFFGGSSTTRPERSDIFQAQTLMRALEAQSVKK-FSLVGLSYGGFVGYRMASMYADAV 143

Query: 167 EKLVLIDASVYTE 179
           EK+V+  A+V  E
Sbjct: 144 EKVVICCAAVCVE 156


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.335    0.145    0.460 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,375,805
Number of Sequences: 26719
Number of extensions: 263764
Number of successful extensions: 1107
Number of sequences better than 10.0: 59
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 1061
Number of HSP's gapped (non-prelim): 60
length of query: 307
length of database: 11,318,596
effective HSP length: 99
effective length of query: 208
effective length of database: 8,673,415
effective search space: 1804070320
effective search space used: 1804070320
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.6 bits)
S2: 60 (27.7 bits)


Medicago: description of AC146567.12