Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146566.1 + phase: 0 
         (155 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g11910 unknown protein                                              38  0.002
At3g50550 unknown protein                                              35  0.016
At5g07170 putative protein                                             35  0.021
At3g49140 putative protein                                             34  0.036
At3g19910 unknown protein                                              34  0.036
At5g66540 unknown protein                                              33  0.047
At3g59020 putative protein                                             33  0.047
At3g14900 hypothetical protein                                         33  0.061
At1g47970 Unknown protein (T2J15.12)                                   33  0.061
At5g61490 putative protein                                             33  0.080
At5g08139 unknown protein                                              33  0.080
At3g24506 unknown protein                                              33  0.080
At2g17240 unknown protein                                              33  0.080
At5g63740 unknown protein                                              32  0.10
At5g60140 putative protein                                             32  0.10
At1g22110 hypothetical protein                                         32  0.10
At5g59000 unknown protein                                              32  0.14
At1g44050 unknown protein                                              32  0.18
At3g18100 putative transcription factor (MYB4R1)                       31  0.23
At1g63980 unknown protein                                              31  0.23

>At2g11910 unknown protein
          Length = 168

 Score = 37.7 bits (86), Expect = 0.002
 Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 35/108 (32%)

Query: 55  DSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPD 114
           DSDDDDDD                  DA   DDDE++ N        E    G  D G +
Sbjct: 74  DSDDDDDDE-----------------DADEDDDDEDDAN-------DEDFSGGEGDEGEE 109

Query: 115 DFPGIDPMDAALISMMMHSHMDDEED--------DEDYEDEEEYTDDE 154
           +    DP D  + +    S  +D++D        DED EDEEE  D+E
Sbjct: 110 E---ADPEDDPVTNGGGGSDDEDDDDEEGDNDDEDEDNEDEEEDDDEE 154



 Score = 27.3 bits (59), Expect = 3.4
 Identities = 9/20 (45%), Positives = 16/20 (80%)

Query: 136 DDEEDDEDYEDEEEYTDDEY 155
           DDE+ DED +DE++  D+++
Sbjct: 80  DDEDADEDDDDEDDANDEDF 99



 Score = 26.6 bits (57), Expect = 5.7
 Identities = 9/21 (42%), Positives = 16/21 (75%)

Query: 133 SHMDDEEDDEDYEDEEEYTDD 153
           S  DD++DDED +++++  DD
Sbjct: 73  SDSDDDDDDEDADEDDDDEDD 93


>At3g50550 unknown protein
          Length = 95

 Score = 35.0 bits (79), Expect = 0.016
 Identities = 30/96 (31%), Positives = 40/96 (41%), Gaps = 34/96 (35%)

Query: 54  FDSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGP 113
           +D DDDDDD                  D    D+D+EE         ++  +SG D    
Sbjct: 17  YDEDDDDDDD----------------TDGESSDEDDEE---------EDRNLSGDDSESS 51

Query: 114 DDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEE 149
           +D    D  D+        S  DDEEDD+D E+EEE
Sbjct: 52  ED----DYTDSN-----SDSDDDDEEDDDDEEEEEE 78


>At5g07170 putative protein
          Length = 542

 Score = 34.7 bits (78), Expect = 0.021
 Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 19/109 (17%)

Query: 51  LGPFDSDD----DDDDGFRVSR-MAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMV 105
           +G   SDD    DDD+  +++  + + Q+   I   +   +DD E  + +  AA  +A  
Sbjct: 55  MGNISSDDHYCGDDDENMKIAAAIPSSQDDPLIDDSSSDEEDDSESTHCY--AADDDADD 112

Query: 106 SGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
           +  D+   DD    D  D            DD++DD+D +D++E  D E
Sbjct: 113 TDDDEDDDDDDDDDDDDD------------DDDDDDDDDDDDDESKDSE 149



 Score = 26.9 bits (58), Expect = 4.4
 Identities = 29/123 (23%), Positives = 44/123 (35%), Gaps = 31/123 (25%)

Query: 32  DPFEMMALSDSLAGGSGPCLGPFDSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEE 91
           D  E M ++ ++       L    S D++DD       AA  +A     D    DDD+++
Sbjct: 67  DDDENMKIAAAIPSSQDDPLIDDSSSDEEDDSESTHCYAADDDADDTDDDEDDDDDDDDD 126

Query: 92  FNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYT 151
                            DD   DD    D               DD+++ +D E EEE  
Sbjct: 127 -----------------DDDDDDDDDDDDD--------------DDDDESKDSEVEEEEG 155

Query: 152 DDE 154
           DD+
Sbjct: 156 DDD 158


>At3g49140 putative protein
          Length = 1229

 Score = 33.9 bits (76), Expect = 0.036
 Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 19/92 (20%)

Query: 63  GFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFPGIDPM 122
           GF    M    E M +    F  +DDE                SG DD    +  G D  
Sbjct: 919 GFDTMEMIKEMELMGLSDSDFETEDDE----------------SGDDD---SEDTGEDED 959

Query: 123 DAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
           +   ++++     DD++DD+D ED+++   DE
Sbjct: 960 EEEWVAILEDEDEDDDDDDDDDEDDDDSDSDE 991



 Score = 27.3 bits (59), Expect = 3.4
 Identities = 34/130 (26%), Positives = 49/130 (37%), Gaps = 58/130 (44%)

Query: 26  DFFEGMDPFEMMALSDSLAGGSGPCLGPFDSDDD---DDDGFRVSRMAAMQEAMAIGMDA 82
           D  E +   E+M LSDS           F+++DD   DDD                  + 
Sbjct: 921 DTMEMIKEMELMGLSDS----------DFETEDDESGDDDS-----------------ED 953

Query: 83  FGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDE 142
            G D+DEEE+            V+ ++D   DD    D  D            DD+EDD+
Sbjct: 954 TGEDEDEEEW------------VAILEDEDEDD----DDDD------------DDDEDDD 985

Query: 143 DYEDEEEYTD 152
           D + +E   D
Sbjct: 986 DSDSDESLGD 995


>At3g19910 unknown protein
          Length = 340

 Score = 33.9 bits (76), Expect = 0.036
 Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)

Query: 109 DDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEE-EYTDDE 154
           D++  DD P  D +D     + +H++ DD+EDD + + EE  YTDDE
Sbjct: 151 DEYETDDDPQEDGLD-----VNVHANEDDQEDDGNSDIEEVAYTDDE 192


>At5g66540 unknown protein
          Length = 524

 Score = 33.5 bits (75), Expect = 0.047
 Identities = 26/105 (24%), Positives = 47/105 (44%), Gaps = 9/105 (8%)

Query: 54  FDSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAM------VSG 107
           FDSDD DD+   +    +  E      +    +++EEE          E +      +  
Sbjct: 119 FDSDDVDDEDKEIESNDSEGEDEEEEEEDEEEEEEEEEEEEEEKDGDNEGIEDKFFKIKE 178

Query: 108 IDDF---GPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEE 149
           +++F   G  +  GID  +   ++     ++ D+ED+ED +DEEE
Sbjct: 179 LEEFLEEGEAEEYGIDHKNKKGVAQRKKQNLSDDEDEEDDDDEEE 223



 Score = 29.6 bits (65), Expect = 0.68
 Identities = 19/54 (35%), Positives = 27/54 (49%), Gaps = 4/54 (7%)

Query: 105 VSGIDDFGPDDFPGIDPMDAALISMMMHSH----MDDEEDDEDYEDEEEYTDDE 154
           VS  DD    D  G D  D       + S+     D+EE++ED E+EEE  ++E
Sbjct: 105 VSHEDDIDEMDMDGFDSDDVDDEDKEIESNDSEGEDEEEEEEDEEEEEEEEEEE 158


>At3g59020 putative protein
          Length = 1112

 Score = 33.5 bits (75), Expect = 0.047
 Identities = 30/115 (26%), Positives = 44/115 (38%), Gaps = 34/115 (29%)

Query: 36   MMALSDSLAGGSGPCLGPFDSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVF 95
            ++A  D LA  +       D D DDDD                 MD F  DD++E+    
Sbjct: 958  LVAYKDQLAEAAKAEEEEEDEDGDDDD-----------------MDEFQTDDEDEDG--- 997

Query: 96   RMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEE-DDEDYEDEEE 149
                         DD  PD+  G      A  +    S+ DD++  D+D+ D+EE
Sbjct: 998  -------------DDENPDETDGSTLRKLAAQAKDFRSYSDDDDFSDDDFSDDEE 1039


>At3g14900 hypothetical protein
          Length = 611

 Score = 33.1 bits (74), Expect = 0.061
 Identities = 24/99 (24%), Positives = 49/99 (49%), Gaps = 16/99 (16%)

Query: 71  AMQEAMAIGMDAFGPDDDEEEFNVFRMAA-------MQEAMVSGIDDFGPDDFPG----I 119
           A  E M +G DA  PD+DE+E ++   +        +++   +  DD   DD  G    +
Sbjct: 401 AKLEEMELGCDA--PDEDEDEISISGSSEKAEFSEWIEDEADNDDDDDDDDDDDGEVEEV 458

Query: 120 DPMDAALISM---MMHSHMDDEEDDEDYEDEEEYTDDEY 155
           D  D  ++ +   +    ++DE ++ D E++E Y ++++
Sbjct: 459 DDDDNMVVDVEGNVEEDSLEDEIEESDPEEDERYWEEQF 497


>At1g47970 Unknown protein (T2J15.12)
          Length = 198

 Score = 33.1 bits (74), Expect = 0.061
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 21/100 (21%)

Query: 56  SDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFR-MAAMQEAMVSGIDDFGPD 114
           SD+DDDDG         +E           DDD+++  V + +           D+ G +
Sbjct: 39  SDEDDDDGSEGDDDDDEEEEE--------DDDDDDDVQVLQSLGGPPVQSAEDEDEEGDE 90

Query: 115 DFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
           D  G D  D            D ++DD+D +DE+E  +DE
Sbjct: 91  DGNGDDDDD------------DGDDDDDDDDDEDEDVEDE 118



 Score = 30.4 bits (67), Expect = 0.40
 Identities = 29/111 (26%), Positives = 42/111 (37%), Gaps = 27/111 (24%)

Query: 55  DSDDDDDDGFRVSR-------MAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMVSG 107
           + DDDDDD  +V +        +A  E      D  G DDD++                G
Sbjct: 58  EEDDDDDDDVQVLQSLGGPPVQSAEDEDEEGDEDGNGDDDDDD----------------G 101

Query: 108 IDDFGPDDFPGIDPMDAALIS----MMMHSHMDDEEDDEDYEDEEEYTDDE 154
            DD   DD    D  D   +     +      +DEED  D+E EE   +++
Sbjct: 102 DDDDDDDDDEDEDVEDEGDLGTEYLVRPVGRAEDEEDASDFEPEENGVEED 152


>At5g61490 putative protein
          Length = 260

 Score = 32.7 bits (73), Expect = 0.080
 Identities = 27/129 (20%), Positives = 53/129 (40%), Gaps = 27/129 (20%)

Query: 24  DSDFFEGMDPFEMMALSDSLAGGSGPCLGPFDSDDDDDDGFRVSRMAAMQEAMAIGMDAF 83
           D D + G +  E+   SD++   S P + P                 ++  + A    ++
Sbjct: 9   DGDKYGGTEELELFGKSDTVTVNSIPHMSP-----------------SVSSSSASAKMSY 51

Query: 84  GPDDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDED 143
           G +++E     F   A+ + +     D   D  P +D +D A  ++ +  + DD+E+  D
Sbjct: 52  GFNEEE-----FEWVAVDKEI-----DLVTDKAPELDEVDDAFSALQLMFNDDDDEESGD 101

Query: 144 YEDEEEYTD 152
              E E+ D
Sbjct: 102 QLSESEFVD 110


>At5g08139 unknown protein
          Length = 376

 Score = 32.7 bits (73), Expect = 0.080
 Identities = 27/91 (29%), Positives = 39/91 (42%), Gaps = 9/91 (9%)

Query: 4   MLDVLGEVDLSSGEFYSIMRDSDFFEGMDPFEMMALSDSLAGGSGPCLGPFDSDDDDDDG 63
           +++ LG+ D+     +    D DFF G   F  +   D  + G+   L   +S  DDDDG
Sbjct: 62  IVENLGDSDIDVSNDFDEPDDDDFFVGRTDFG-LEFRDIASSGNDIRLITVESGSDDDDG 120

Query: 64  FRVSRMAAMQEAMAIGM---DAFGPDDDEEE 91
               R     E   I +   D +  DDDE E
Sbjct: 121 VENER-----ELWGIDLNEEDVYVNDDDEYE 146


>At3g24506 unknown protein
          Length = 149

 Score = 32.7 bits (73), Expect = 0.080
 Identities = 15/42 (35%), Positives = 24/42 (56%)

Query: 113 PDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
           PD FP   PM + L   M +   ++EE++E+ ++EE   D E
Sbjct: 97  PDIFPKFSPMKSPLPPPMPYDPPEEEEEEEEKKEEETEDDPE 138


>At2g17240 unknown protein
          Length = 140

 Score = 32.7 bits (73), Expect = 0.080
 Identities = 14/42 (33%), Positives = 24/42 (56%)

Query: 113 PDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
           PD FP   PM   L   M +   +++E++E+ ++EEE   D+
Sbjct: 89  PDIFPKFSPMKTPLPPPMPYDPPEEDEEEEEKKEEEEENPDQ 130


>At5g63740 unknown protein
          Length = 226

 Score = 32.3 bits (72), Expect = 0.10
 Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 14/74 (18%)

Query: 81  DAFGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEED 140
           D  G +D++E+ +    A   E      DD   DD    D  D A          DD+ED
Sbjct: 66  DGDGDEDEDEDAD----ADEDEDEDEDEDDDDDDDDDDDDDADDA----------DDDED 111

Query: 141 DEDYEDEEEYTDDE 154
           D+D +D+E+  DD+
Sbjct: 112 DDDEDDDEDEDDDD 125



 Score = 29.3 bits (64), Expect = 0.88
 Identities = 26/110 (23%), Positives = 41/110 (36%), Gaps = 29/110 (26%)

Query: 46  GSGPCLGPFDSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDDEEEFNVFRMAAMQEAMV 105
           G G   G  D D+D+D+                  DA   +D++E+ +            
Sbjct: 59  GEGDGDGDGDGDEDEDE------------------DADADEDEDEDEDE----------- 89

Query: 106 SGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDEY 155
              DD   DD    D  D            D+++DD+D ++ +E  DDEY
Sbjct: 90  DDDDDDDDDDDDDADDADDDEDDDDEDDDEDEDDDDDDDDENDEECDDEY 139


>At5g60140 putative protein
          Length = 328

 Score = 32.3 bits (72), Expect = 0.10
 Identities = 29/102 (28%), Positives = 41/102 (39%), Gaps = 24/102 (23%)

Query: 55  DSDDDDDDGFRVSRMAAMQEAMAIGMDAFGPDDD--EEEFNVFRMAAMQEAMVSGIDDFG 112
           DSDD D+D              ++  D    DDD  E+E +V            G++D  
Sbjct: 149 DSDDSDND-------------YSVEDDNVAEDDDGLEDEVDVEAEDGYDAKDSDGLEDED 195

Query: 113 PDDFP-GIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDD 153
            D+   G D  D           ++DE+D ED +DE  Y DD
Sbjct: 196 DDEAEDGYDAKD--------DDGLEDEDDLEDEDDERRYLDD 229


>At1g22110 hypothetical protein
          Length = 282

 Score = 32.3 bits (72), Expect = 0.10
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query: 132 HSHMDDEEDDEDYEDEEEYTDDE 154
           H   DDEEDD++ +DE+E  DD+
Sbjct: 175 HYQSDDEEDDDECDDEDECDDDD 197


>At5g59000 unknown protein
          Length = 231

 Score = 32.0 bits (71), Expect = 0.14
 Identities = 12/20 (60%), Positives = 17/20 (85%)

Query: 136 DDEEDDEDYEDEEEYTDDEY 155
           DD+ED+ED E+EEE  ++EY
Sbjct: 106 DDDEDEEDEEEEEEEEEEEY 125



 Score = 30.4 bits (67), Expect = 0.40
 Identities = 12/19 (63%), Positives = 15/19 (78%)

Query: 136 DDEEDDEDYEDEEEYTDDE 154
           DD +DDED EDEEE  ++E
Sbjct: 103 DDSDDDEDEEDEEEEEEEE 121



 Score = 25.8 bits (55), Expect = 9.8
 Identities = 8/19 (42%), Positives = 16/19 (84%)

Query: 136 DDEEDDEDYEDEEEYTDDE 154
           +DEE+++D +D+E+  D+E
Sbjct: 97  EDEEEEDDSDDDEDEEDEE 115


>At1g44050 unknown protein
          Length = 734

 Score = 31.6 bits (70), Expect = 0.18
 Identities = 26/79 (32%), Positives = 40/79 (49%), Gaps = 14/79 (17%)

Query: 88  DEEEFNVFRMAAMQEAMVSG---IDDFGPDDFPGIDPM---DAALIS-----MMMHSHMD 136
           D + F V+ +        SG     D G DD P + P+    AA I+     + MH+H D
Sbjct: 13  DGKSFLVYTLTQTDNPTSSGEALAMDSGGDDLP-LQPLFFCPAARINFHKLRLKMHNHDD 71

Query: 137 DE--EDDEDYEDEEEYTDD 153
           D+  EDD++ +D+E+  DD
Sbjct: 72  DDDAEDDDNGDDKEDGDDD 90



 Score = 27.7 bits (60), Expect = 2.6
 Identities = 14/43 (32%), Positives = 23/43 (52%)

Query: 112 GPDDFPGIDPMDAALISMMMHSHMDDEEDDEDYEDEEEYTDDE 154
           G DD  G D  D          + DD++DD+D +D+++  DD+
Sbjct: 87  GDDDNKGDDGDDDNEDDNEDDDNDDDDDDDDDDDDDDDDDDDD 129



 Score = 26.2 bits (56), Expect = 7.5
 Identities = 8/19 (42%), Positives = 16/19 (84%)

Query: 136 DDEEDDEDYEDEEEYTDDE 154
           DD++DD+D +D+++  DD+
Sbjct: 115 DDDDDDDDDDDDDDDGDDD 133


>At3g18100 putative transcription factor (MYB4R1)
          Length = 847

 Score = 31.2 bits (69), Expect = 0.23
 Identities = 24/83 (28%), Positives = 38/83 (44%), Gaps = 4/83 (4%)

Query: 13  LSSGEFYSIMRDSDFFEGMDPFEMMALSDSLAG-GSGPCLG-PFDSDDDDDDGFRVSRMA 70
           +  GE  S   + D FE +   +    S   AG  SGP +G    SD + +D F + R  
Sbjct: 54  VGGGEIPSDSENEDDFEMLRTIKSQLASSKDAGRSSGPPMGLSLLSDSESEDDFEMIRSI 113

Query: 71  AMQEAMA--IGMDAFGPDDDEEE 91
             Q +++  + +   G  DDEE+
Sbjct: 114 KSQLSLSMDVSLPPIGLSDDEED 136


>At1g63980 unknown protein
          Length = 391

 Score = 31.2 bits (69), Expect = 0.23
 Identities = 22/71 (30%), Positives = 32/71 (44%), Gaps = 2/71 (2%)

Query: 83  FGPDDDEEEFNVFRMAAMQEAMVSGIDDFGPDDFPGIDPMDAALISMMMHSHMDDEEDDE 142
           F  +D E  +N+ +  A       GI D  P    G+   +    S       DD++DD+
Sbjct: 219 FSENDQENLYNMVQDKATAGKQGLGIKD-RPKKIAGVR-YEGKKTSFDNSDDDDDDDDDD 276

Query: 143 DYEDEEEYTDD 153
           D EDEEE  D+
Sbjct: 277 DEEDEEEDEDE 287



 Score = 30.0 bits (66), Expect = 0.52
 Identities = 12/19 (63%), Positives = 15/19 (78%)

Query: 136 DDEEDDEDYEDEEEYTDDE 154
           DDEED+E+ EDE E  DD+
Sbjct: 276 DDEEDEEEDEDESEADDDD 294



 Score = 25.8 bits (55), Expect = 9.8
 Identities = 8/19 (42%), Positives = 15/19 (78%)

Query: 136 DDEEDDEDYEDEEEYTDDE 154
           DD+E+DE+ +++E   DD+
Sbjct: 275 DDDEEDEEEDEDESEADDD 293


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.317    0.138    0.402 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,244,727
Number of Sequences: 26719
Number of extensions: 209750
Number of successful extensions: 3767
Number of sequences better than 10.0: 177
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 2221
Number of HSP's gapped (non-prelim): 883
length of query: 155
length of database: 11,318,596
effective HSP length: 91
effective length of query: 64
effective length of database: 8,887,167
effective search space: 568778688
effective search space used: 568778688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)


Medicago: description of AC146566.1