BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146564.2 - phase: 0 
         (494 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At1g62710 beta-VPE                                                    154  1e-37
At4g32940 gamma-VPE (vacuolar processing enzyme)                      138  8e-33
At2g25940 putative vacuolar processing enzyme                         138  8e-33
At3g20210 vacuolar processing enzyme/asparaginyl endopeptidase, ...   126  3e-29
At1g08750 GPI-anchor transamidase (U32517) like protein                48  1e-05

>At1g62710 beta-VPE
          Length = 486

 Score =  154 bits (389), Expect = 1e-37
 Identities = 79/115 (68%), Positives = 90/115 (77%), Gaps = 4/115 (3%)

Query: 12  LLLLLTLDGLVARPNHLEWDPVIRLPGEVVDDAEVDE--VGTRWAVLVAGSSGYGNYRHQ 69
           LLLLL L  LV   +   ++P I +P E  + A+ DE  VGTRWAVLVAGSSGYGNYRHQ
Sbjct: 11  LLLLLVL--LVHAESRGRFEPKILMPTEEANPADQDEDGVGTRWAVLVAGSSGYGNYRHQ 68

Query: 70  ADVCHAYQLLIKGGVKEENIVVFMYDDIANNELNPRPGVIINHPQGPNVYVGVPK 124
           ADVCHAYQ+L KGG+KEENIVV MYDDIAN+ LNPRPG +INHP G +VY GVPK
Sbjct: 69  ADVCHAYQILRKGGLKEENIVVLMYDDIANHPLNPRPGTLINHPDGDDVYAGVPK 123


>At4g32940 gamma-VPE (vacuolar processing enzyme)
          Length = 494

 Score =  138 bits (347), Expect = 8e-33
 Identities = 68/100 (68%), Positives = 76/100 (76%), Gaps = 6/100 (6%)

Query: 31  DPVIRLPGEV------VDDAEVDEVGTRWAVLVAGSSGYGNYRHQADVCHAYQLLIKGGV 84
           D VI+LP +        ++ +    GTRWAVLVAGSSGY NYRHQAD+CHAYQLL KGG+
Sbjct: 32  DDVIKLPSQASRFFRPAENDDDSNSGTRWAVLVAGSSGYWNYRHQADICHAYQLLRKGGL 91

Query: 85  KEENIVVFMYDDIANNELNPRPGVIINHPQGPNVYVGVPK 124
           KEENIVVFMYDDIANN  NPRPG IIN P G +VY GVPK
Sbjct: 92  KEENIVVFMYDDIANNYENPRPGTIINSPHGKDVYQGVPK 131


>At2g25940 putative vacuolar processing enzyme
          Length = 478

 Score =  138 bits (347), Expect = 8e-33
 Identities = 70/95 (73%), Positives = 75/95 (78%), Gaps = 3/95 (3%)

Query: 33  VIRLPG---EVVDDAEVDEVGTRWAVLVAGSSGYGNYRHQADVCHAYQLLIKGGVKEENI 89
           VI+LP    +     E D+  T+WAVLVAGSSGY NYRHQADVCHAYQLL KGGVKEENI
Sbjct: 22  VIKLPSLASKFFRPTENDDDSTKWAVLVAGSSGYWNYRHQADVCHAYQLLKKGGVKEENI 81

Query: 90  VVFMYDDIANNELNPRPGVIINHPQGPNVYVGVPK 124
           VVFMYDDIA NE NPRPGVIIN P G +VY GVPK
Sbjct: 82  VVFMYDDIAKNEENPRPGVIINSPNGEDVYNGVPK 116


>At3g20210 vacuolar processing enzyme/asparaginyl endopeptidase,
           putative
          Length = 466

 Score =  126 bits (316), Expect = 3e-29
 Identities = 58/84 (69%), Positives = 69/84 (82%)

Query: 41  VDDAEVDEVGTRWAVLVAGSSGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIANN 100
           V+ ++    GTRWAVLVAGS+ Y NYRHQAD+CHAYQ+L KGG+K+ENI+VFMYDDIA +
Sbjct: 35  VESSDKSAKGTRWAVLVAGSNEYYNYRHQADICHAYQILRKGGLKDENIIVFMYDDIAFS 94

Query: 101 ELNPRPGVIINHPQGPNVYVGVPK 124
             NPRPGVIIN P G +VY GVPK
Sbjct: 95  SENPRPGVIINKPDGEDVYKGVPK 118


>At1g08750 GPI-anchor transamidase (U32517) like protein
          Length = 388

 Score = 48.1 bits (113), Expect = 1e-05
 Identities = 22/60 (36%), Positives = 35/60 (57%)

Query: 53  WAVLVAGSSGYGNYRHQADVCHAYQLLIKGGVKEENIVVFMYDDIANNELNPRPGVIINH 112
           WAVLV  S  + NYRH A+    Y+ + + G+ +E I++ + DD+A N  N  P  + N+
Sbjct: 28  WAVLVCTSRFWFNYRHMANTLSLYRTVKRLGIPDERIILMLADDMACNARNEYPAQVFNN 87


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.348    0.155    0.614 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,422,596
Number of Sequences: 26719
Number of extensions: 476750
Number of successful extensions: 1362
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1357
Number of HSP's gapped (non-prelim): 5
length of query: 494
length of database: 11,318,596
effective HSP length: 103
effective length of query: 391
effective length of database: 8,566,539
effective search space: 3349516749
effective search space used: 3349516749
T: 11
A: 40
X1: 14 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 38 (21.8 bits)
S2: 62 (28.5 bits)