Medicago
BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC146559.4 - phase: 0 /pseudo
         (159 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done


                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g02230 putative phloem-specific lectin                             128  1e-30
At5g24560 phloem-specific lectin-like protein                         115  1e-26
At2g02250 lectin-like protein                                         114  2e-26
At2g02360 putative phloem-specific lectin                             112  8e-26
At2g02340 putative phloem-specific lectin                             108  1e-24
At2g02350 SKP1 interacting partner 3 (SKIP3)                          103  3e-23
At2g02310 putative phloem-specific lectin                             103  3e-23
At1g09155 unknown protein                                             101  2e-22
At1g56250 hypothetical protein                                         97  5e-21
At2g02270 putative phloem-specific lectin                              95  2e-20
At1g56240 hypothetical protein                                         94  2e-20
At2g02300 putative phloem-specific lectin                              89  1e-18
At2g02320 unknown protein                                              87  3e-18
At3g53000 unknown protein                                              67  5e-12
At5g52120 unknown protein                                              60  6e-10
At3g61060 unknown protein                                              59  1e-09
At1g63090 unknown protein                                              54  5e-08
At1g12710 unknown protein                                              52  1e-07
At5g39450 unknown protein                                              40  7e-04
At4g19195 putatative protein                                           33  0.065

>At2g02230 putative phloem-specific lectin
          Length = 317

 Score =  128 bits (321), Expect = 1e-30
 Identities = 60/130 (46%), Positives = 91/130 (69%), Gaps = 7/130 (5%)

Query: 10  SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
           S  + LPE CI+K++SHT+P D+C ++ V K   SAA+SD VW+ FLPS+  S++  S  
Sbjct: 30  SRFDALPEDCISKVISHTSPRDACVVASVSKSVKSAAQSDLVWEMFLPSEYSSLVLQS-- 87

Query: 70  ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
                +   SKK ++L+L+D+ +++ENGKKSF +EK SG+K YMLSA +++I  GD+P +
Sbjct: 88  -----ANHLSKKEIFLSLADNSVLVENGKKSFWVEKASGKKCYMLSAMELTIIWGDSPAY 142

Query: 130 WDWPILPESR 139
           W W  +PES+
Sbjct: 143 WKWITVPESK 152


>At5g24560 phloem-specific lectin-like protein
          Length = 251

 Score =  115 bits (288), Expect = 1e-26
 Identities = 59/125 (47%), Positives = 82/125 (65%), Gaps = 7/125 (5%)

Query: 15  LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
           LPE CIA ++S T+P D+CR+S V K   SAA S+T W+RFLPSD    I +S S  S  
Sbjct: 6   LPEECIATMISFTSPFDACRISAVSKLLRSAADSNTTWERFLPSDYRMYIDNSLSRFS-- 63

Query: 75  STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWPI 134
                 K L+L   + P++IE+G+ SF +EK+SG+K +MLSAR + I   D+P+FW W  
Sbjct: 64  -----NKQLFLRFCESPLLIEDGRTSFWMEKRSGKKCWMLSARKLDIVWVDSPEFWIWVS 118

Query: 135 LPESR 139
           +P+SR
Sbjct: 119 IPDSR 123


>At2g02250 lectin-like protein
          Length = 305

 Score =  114 bits (286), Expect = 2e-26
 Identities = 60/131 (45%), Positives = 87/131 (65%), Gaps = 8/131 (6%)

Query: 10  SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
           S+ + LPE CI+ I+S T+P D+C  + V K F SA  SD+VWD+FLPSD  S++     
Sbjct: 40  SLFDNLPEDCISNIISFTSPRDACVAASVSKTFESAVNSDSVWDKFLPSDYSSLV----P 95

Query: 70  ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLS-ARDISIALGDTPQ 128
            S +FS   SKK LY  + D+P+++E+G KSF LEK++G+K +MLS  + + I    TPQ
Sbjct: 96  PSRVFS---SKKELYFAICDNPVLVEDGGKSFWLEKENGKKCFMLSPKKSMWITWVSTPQ 152

Query: 129 FWDWPILPESR 139
           +W W  +PE+R
Sbjct: 153 YWRWISIPEAR 163


>At2g02360 putative phloem-specific lectin
          Length = 272

 Score =  112 bits (280), Expect = 8e-26
 Identities = 59/136 (43%), Positives = 84/136 (61%), Gaps = 7/136 (5%)

Query: 4   KTEEAKSMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISI 63
           + +   S  +  PE CI+ I+S T P D+C  + V K F S  KSD +W++FLP+D  S+
Sbjct: 6   RVKSESSPFDSFPEDCISYIISFTNPRDACVAATVSKTFESTVKSDIIWEKFLPADYESL 65

Query: 64  ISDSPSASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIAL 123
           I  S     +FS   SKK LY +L + P++ ++ KKS  LEK SG++  MLSA ++SI  
Sbjct: 66  IPPS----RVFS---SKKELYFSLCNDPVLFDDDKKSVWLEKASGKRCLMLSAMNLSIIW 118

Query: 124 GDTPQFWDWPILPESR 139
           GD PQ+W W  +PESR
Sbjct: 119 GDNPQYWQWIPIPESR 134


>At2g02340 putative phloem-specific lectin
          Length = 305

 Score =  108 bits (270), Expect = 1e-24
 Identities = 57/143 (39%), Positives = 91/143 (62%), Gaps = 6/143 (4%)

Query: 12  IEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSAS 71
           ++ LPE C++ I+S T+P D+C L+ V K F SA KSD VW++F+P +  S+IS S +  
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWEKFIPPEYESLISQSRAFK 95

Query: 72  SLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWD 131
            L     SKK LY  L D  ++I++GKKS  +EK + ++  M+SA +++IA G++PQ W 
Sbjct: 96  FL-----SKKELYFALCDKSVLIDDGKKSLWIEKANAKRCIMISAMNLAIAWGNSPQSWR 150

Query: 132 WPILPESRCVNCVIDLVFITTFD 154
           W   P++R    V +L+ +  F+
Sbjct: 151 WIPDPQAR-FETVAELLEVCLFE 172


>At2g02350 SKP1 interacting partner 3 (SKIP3)
          Length = 294

 Score =  103 bits (258), Expect = 3e-23
 Identities = 60/131 (45%), Positives = 86/131 (64%), Gaps = 8/131 (6%)

Query: 10  SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
           S ++ LPEGCI+ I+S T+P D+C  + V K F SA KSD VW++FLP+D  S+I    +
Sbjct: 22  STLDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWEKFLPTDYESLI----T 77

Query: 70  ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISI-ALGDTPQ 128
            S +FS   SKK LY +L + P++IE+GK S  LEK SG++  MLSA  +++ ++ D  Q
Sbjct: 78  PSRVFS---SKKELYFSLCNDPLLIEDGKMSLWLEKASGKRCIMLSATAMNLSSMADMSQ 134

Query: 129 FWDWPILPESR 139
            + W   PESR
Sbjct: 135 RFLWIPCPESR 145


>At2g02310 putative phloem-specific lectin
          Length = 307

 Score =  103 bits (258), Expect = 3e-23
 Identities = 53/129 (41%), Positives = 79/129 (61%), Gaps = 7/129 (5%)

Query: 10  SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
           S  + LPE CI+ I+S T+P D C  + V K F  A + D++W++FLPS+  S+I     
Sbjct: 43  SPFDDLPEDCISNIISFTSPRDVCVSASVSKSFAHAVQCDSIWEKFLPSEYESLIPP--- 99

Query: 70  ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
               +    SKK LY TL   P+++E+GKKSF LE  SG+K  +L+A+++ I  G+ P++
Sbjct: 100 ----WRVFSSKKDLYFTLCYDPVLVEDGKKSFWLETASGKKCVLLAAKELWITGGNNPEY 155

Query: 130 WDWPILPES 138
           W W  L ES
Sbjct: 156 WQWIELCES 164


>At1g09155 unknown protein
          Length = 289

 Score =  101 bits (251), Expect = 2e-22
 Identities = 55/126 (43%), Positives = 76/126 (59%), Gaps = 4/126 (3%)

Query: 14  VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
           +LPE C+A ILS T P D+   + V   F  A  SD VW++FLP+D   +IS S     +
Sbjct: 2   MLPEACVATILSFTTPADTISSAAVSSVFRVAGDSDFVWEKFLPTDYCHVISRSTDPHRI 61

Query: 74  FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
           FS   SKK LY  L +  I+I+NG+K F++EK SG+  Y+LS+RD+SI   D   +W W 
Sbjct: 62  FS---SKKELYRCLCE-SILIDNGRKIFKIEKLSGKISYILSSRDLSITWSDQRHYWSWS 117

Query: 134 ILPESR 139
              +SR
Sbjct: 118 PRSDSR 123


>At1g56250 hypothetical protein
          Length = 282

 Score = 96.7 bits (239), Expect = 5e-21
 Identities = 56/126 (44%), Positives = 75/126 (59%), Gaps = 4/126 (3%)

Query: 14  VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
           +LPE CIA IL+ T+P D+   S V   F  A  SD VW++FLPSD  S+IS S      
Sbjct: 3   MLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSDYKSLISQSTDHHWN 62

Query: 74  FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
            S   SKK +Y  L D  ++I+N +K F++ K SG+  Y+LSARDISI   D   +W W 
Sbjct: 63  IS---SKKEIYRCLCD-SLLIDNARKLFKINKFSGKISYVLSARDISITHSDHASYWSWS 118

Query: 134 ILPESR 139
            + +SR
Sbjct: 119 NVSDSR 124


>At2g02270 putative phloem-specific lectin
          Length = 265

 Score = 94.7 bits (234), Expect = 2e-20
 Identities = 54/126 (42%), Positives = 76/126 (59%), Gaps = 7/126 (5%)

Query: 10  SMIEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPS 69
           S  + LPE CI+ I+S T P D+C  + V K F SA +SD+VW++FLP D  S++ +S  
Sbjct: 11  SPFDGLPENCISNIISFTTPRDACFAASVSKAFESAVQSDSVWEKFLPLDYSSLVPES-- 68

Query: 70  ASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQF 129
                    SKK L  +L   P++IE GKKSF L+K SG K  MLS + + I+  ++PQF
Sbjct: 69  -----RVFLSKKELCFSLCRVPLLIEGGKKSFWLDKTSGEKCIMLSPKGMVISWVNSPQF 123

Query: 130 WDWPIL 135
            + P L
Sbjct: 124 EEVPEL 129


>At1g56240 hypothetical protein
          Length = 284

 Score = 94.4 bits (233), Expect = 2e-20
 Identities = 54/126 (42%), Positives = 75/126 (58%), Gaps = 4/126 (3%)

Query: 14  VLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSL 73
           +LPE C+A IL+ T+P D+   S V   F  A  SD VW++FLPS   S+IS S     +
Sbjct: 3   MLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWEKFLPSHYKSLISQSTDHHRI 62

Query: 74  FSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWP 133
           FS   SKK +Y  L D  ++I+N +K F++ K SG+  Y+LSARDISI   D   +  W 
Sbjct: 63  FS---SKKEIYRCLCD-SLLIDNARKLFKINKFSGKISYILSARDISITYSDHASYCSWS 118

Query: 134 ILPESR 139
            + +SR
Sbjct: 119 NVSDSR 124


>At2g02300 putative phloem-specific lectin
          Length = 284

 Score = 89.0 bits (219), Expect = 1e-18
 Identities = 60/142 (42%), Positives = 85/142 (59%), Gaps = 11/142 (7%)

Query: 15  LPEGCIAKILSHTA-PVDSCRLSLVCKGFCSAAKSDTVWDRFLPS-DLISIISDSPSASS 72
           LP+ C+A I S T+ P D+   +LV K F     SD+VW++FLP  D +S++  S     
Sbjct: 37  LPDDCLAIISSFTSTPRDAFLAALVSKSFGLQFNSDSVWEKFLPPPDYVSLLPKS----R 92

Query: 73  LFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDW 132
           +FS   SKK LY  L D P    NGK SF+L+K SG+K  MLSA+ + I+    P++W W
Sbjct: 93  VFS---SKKELYFALCD-PFPNHNGKMSFRLDKASGKKCVMLSAKKLLISRVVNPKYWKW 148

Query: 133 PILPESRCVNCVIDLVFITTFD 154
             +PESR  + V +L+ I +FD
Sbjct: 149 ISIPESR-FDEVPELLNIDSFD 169


>At2g02320 unknown protein
          Length = 307

 Score = 87.4 bits (215), Expect = 3e-18
 Identities = 51/140 (36%), Positives = 78/140 (55%), Gaps = 10/140 (7%)

Query: 15  LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
           LPE CI+ I+S T+P D+C  +LV K F SA +SD VW++F+P +  S++S S   S   
Sbjct: 43  LPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWEKFIPPEYESLLSRSQHFS--- 99

Query: 75  STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWPI 134
               SKK L+  L D  ++I   KK   +EK +G++  MLSA  ++++   T   W W  
Sbjct: 100 ----SKKELFFALCDESVLINVSKKDLWIEKATGKRCMMLSASALNLS---THHTWKWIT 152

Query: 135 LPESRCVNCVIDLVFITTFD 154
            P S  +  V +L+    F+
Sbjct: 153 NPVSAWLETVPELLTTRWFE 172


>At3g53000 unknown protein
          Length = 300

 Score = 66.6 bits (161), Expect = 5e-12
 Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 4/125 (3%)

Query: 15  LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
           +PE C+A +  +  P + C L+ + + F  AA SD+VW++ LP +   ++   P      
Sbjct: 24  IPESCVACVFMYLTPPEICNLAGLNRSFRGAASSDSVWEKKLPENYQDLLDLLPPER--- 80

Query: 75  STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWPI 134
             S SKK ++  LS  PI  ++  K   +++ +GR    +SAR +SI   +  ++W+W  
Sbjct: 81  YHSLSKKDIFAVLS-RPIPFDDDNKEVWIDRVTGRVCMAISARGMSITGIEDRRYWNWIP 139

Query: 135 LPESR 139
             ESR
Sbjct: 140 TEESR 144


>At5g52120 unknown protein
          Length = 291

 Score = 59.7 bits (143), Expect = 6e-10
 Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 5/132 (3%)

Query: 12  IEVLPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSD----LISIISDS 67
           +E +PE CI  +  +  P + C L+ V K F  A++SD VW+  LPS+    +  I+ D 
Sbjct: 21  LEDVPENCITAMFMYMEPPEICLLARVNKSFHRASRSDAVWEDKLPSNYKFLVRRILEDQ 80

Query: 68  PSASSLFSTSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTP 127
                       KK +Y  L   P + + G K   L+K+SG+    +S + + I   D  
Sbjct: 81  QQVGVKDKLIYRKKEIYARLC-RPNLFDTGTKEAWLDKRSGKVFLAISPKAMKITGIDDR 139

Query: 128 QFWDWPILPESR 139
           ++W+     ESR
Sbjct: 140 RYWEHISSDESR 151


>At3g61060 unknown protein
          Length = 290

 Score = 58.9 bits (141), Expect = 1e-09
 Identities = 38/125 (30%), Positives = 64/125 (50%), Gaps = 3/125 (2%)

Query: 15  LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
           LPE C+A I++   P + CRL+ + + F  A+ +D +W+  LP++   I        +L 
Sbjct: 28  LPENCVALIMTRLDPPEICRLARLNRMFRRASSADFIWESKLPANYRVIAHKVFDEITL- 86

Query: 75  STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWPI 134
            T   KK LY  LS  P + ++G K   ++K +GR    +S++ + I   D  ++W    
Sbjct: 87  -TKLIKKDLYAKLS-QPNLFDDGTKELWIDKNTGRLCLSISSKALRITGIDDRRYWSHIP 144

Query: 135 LPESR 139
             ESR
Sbjct: 145 TDESR 149


>At1g63090 unknown protein
          Length = 289

 Score = 53.5 bits (127), Expect = 5e-08
 Identities = 36/116 (31%), Positives = 58/116 (49%), Gaps = 4/116 (3%)

Query: 15  LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
           LPE C+A IL +  PV+ CR S +   F  A+ +D VW+  LP D   I+         F
Sbjct: 29  LPESCVALILQNLDPVEICRFSKLNTAFHGASWADFVWESKLPPDYKLILE---KILGSF 85

Query: 75  STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFW 130
             +  K+ ++  LS      E  KK++ ++K++G      SA+ +SI   D  ++W
Sbjct: 86  PDNLRKRDIFTFLSRVNSFDEGNKKAW-VDKRTGGLCLCTSAKGLSITGIDDRRYW 140


>At1g12710 unknown protein
          Length = 291

 Score = 52.0 bits (123), Expect = 1e-07
 Identities = 35/125 (28%), Positives = 60/125 (48%), Gaps = 4/125 (3%)

Query: 15  LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLF 74
           LPE C+A I+ +  PV+ CR S + + F  A+ +D VW+  LP +   ++         F
Sbjct: 31  LPEACVAIIVENLDPVEICRFSKLNRAFRGASWADCVWESKLPQNYRDVLEKILGG---F 87

Query: 75  STSPSKKSLYLTLSDHPIVIENGKKSFQLEKQSGRKIYMLSARDISIALGDTPQFWDWPI 134
             +  K+ LY  LS      ++  K   ++K++      +SA+ +SI   D  ++W    
Sbjct: 88  PENLQKRHLYAFLS-RINSFDDATKKVWIDKRTSGVCLSISAKGLSITGIDDRRYWSHIP 146

Query: 135 LPESR 139
             ESR
Sbjct: 147 TDESR 151


>At5g39450 unknown protein
          Length = 579

 Score = 39.7 bits (91), Expect = 7e-04
 Identities = 17/38 (44%), Positives = 20/38 (51%)

Query: 15 LPEGCIAKILSHTAPVDSCRLSLVCKGFCSAAKSDTVW 52
          LPE  IA I    +P D C LSL CK  C    S+ +W
Sbjct: 22 LPEDVIAVIARFVSPRDICNLSLCCKSLCDVVDSERIW 59


>At4g19195 putatative protein
          Length = 654

 Score = 33.1 bits (74), Expect = 0.065
 Identities = 20/77 (25%), Positives = 34/77 (43%)

Query: 21  AKILSHTAPVDSCRLSLVCKGFCSAAKSDTVWDRFLPSDLISIISDSPSASSLFSTSPSK 80
           AK+       D+   + +  GFC +  +D  +  F    L  I  DS +  +L  ++  +
Sbjct: 107 AKVFERMPERDATTWNAMLSGFCQSGHTDKAFSLFREMRLNEITPDSVTVMTLIQSASFE 166

Query: 81  KSLYLTLSDHPIVIENG 97
           KSL L  + H + I  G
Sbjct: 167 KSLKLLEAMHAVGIRLG 183


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.320    0.133    0.400 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,581,456
Number of Sequences: 26719
Number of extensions: 142461
Number of successful extensions: 599
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 537
Number of HSP's gapped (non-prelim): 54
length of query: 159
length of database: 11,318,596
effective HSP length: 91
effective length of query: 68
effective length of database: 8,887,167
effective search space: 604327356
effective search space used: 604327356
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)


Medicago: description of AC146559.4