BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146557.10 - phase: 0
(2492 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g20390 hypothetical protein 763 0.0
At3g31530 hypothetical protein 461 e-129
At2g15410 putative retroelement pol polyprotein 402 e-111
At2g13330 F14O4.9 380 e-105
At2g14400 putative retroelement pol polyprotein 323 6e-88
At2g15100 putative retroelement pol polyprotein 311 4e-84
At2g14380 putative retroelement pol polyprotein 295 2e-79
At1g37200 hypothetical protein 284 4e-76
At4g03800 275 3e-73
At2g10780 pseudogene 267 7e-71
At1g37060 Athila retroelment ORF 1, putative 266 1e-70
At4g10580 putative reverse-transcriptase -like protein 262 2e-69
At2g04670 putative retroelement pol polyprotein 258 4e-68
At2g07660 putative retroelement pol polyprotein 251 3e-66
At3g11970 hypothetical protein 249 2e-65
At1g36590 hypothetical protein 249 2e-65
At2g14650 putative retroelement pol polyprotein 248 3e-65
At1g35370 hypothetical protein 239 2e-62
At2g14040 putative retroelement pol polyprotein 232 2e-60
At2g06320 putative retroelement pol polyprotein 204 4e-52
>At1g20390 hypothetical protein
Length = 1791
Score = 763 bits (1969), Expect = 0.0
Identities = 432/1117 (38%), Positives = 632/1117 (55%), Gaps = 49/1117 (4%)
Query: 1386 ELVNIGTEENKREIKIGATLEEGVKRKIIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPT 1445
E+VNI + R + +GA + ++ ++I LL+ FAWS EDM G+DP I H +
Sbjct: 712 EMVNIDESDPTRCVGVGAEISPSIRLELIALLKRNSKTFAWSIEDMKGIDPAITAHELNV 771
Query: 1446 KPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMC 1505
P PV+QK R+ P+ A + EV+K + AG ++ V+YPEW+AN V V KK+GK R+C
Sbjct: 772 DPTFKPVKQKRRKLGPERARAVNEEVEKLLKAGQIIEVKYPEWLANPVVVKKKNGKWRVC 831
Query: 1506 VDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITP 1565
VD+ DLNKA PKD++PLPHID LV+ T+ + + SFMD FSGYNQI M +D+EKTSF+T
Sbjct: 832 VDYTDLNKACPKDSYPLPHIDRLVEATSGNGLLSFMDAFSGYNQILMHKDDQEKTSFVTD 891
Query: 1566 WGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKM 1625
GT+CYKVM FGL NAGATYQR + + D + VEVY+DDM+VKS E HVE+L+K
Sbjct: 892 RGTYCYKVMSFGLKNAGATYQRFVNKMLADQIGRTVEVYIDDMLVKSLKPEDHVEHLSKC 951
Query: 1626 FERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGF 1685
F+ L Y ++LNP KCTFGV SG+ LG++V+++GIE +P ++RAI E+P+PR ++V+
Sbjct: 952 FDVLNTYGMKLNPTKCTFGVTSGEFLGYVVTKRGIEANPKQIRAILELPSPRNAREVQRL 1011
Query: 1686 LGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPPVEG 1745
GR+ ++RFIS T C P + LL++ W+ + +EAF+ +K YL PPILV P G
Sbjct: 1012 TGRIAALNRFISRSTDKCLPFYNLLKRRAQFDWDKDSEEAFEKLKDYLSTPPILVKPEVG 1071
Query: 1746 RPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAK 1805
L +Y+AV D ++ VL ++D ++ I+Y SK + ETRY ++EK A+ +A+
Sbjct: 1072 ETLYLYIAVSDHAVSSVLVREDR--GEQRPIFYTSKSLVEAETRYPVIEKAALAVVTSAR 1129
Query: 1806 RLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILAD 1865
+LR Y +HT +++ P++ + +G++ +W + LSEYDI F+ + A+K +LAD
Sbjct: 1130 KLRPYFQSHTIAVLTD-QPLRVALHSPSQSGRMTKWAVELSEYDIDFRPRPAMKSQVLAD 1188
Query: 1866 HLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLIEEGPDPNSKWGLVFDGAVNAYGKGI 1925
L PL + EE W L DG+ +A G GI
Sbjct: 1189 FLIELPLQSAERAVSGNRGEE-----------------------WSLYVDGSSSARGSGI 1225
Query: 1926 GAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQI 1985
G +VSP + + R+ F TNN+AEYE I G+ A M+I + + DS L+ Q+
Sbjct: 1226 GIRLVSPTAEVLEQSFRLRFVATNNVAEYEVLIAGLRLAAGMQITTIHAFTDSQLIAGQL 1285
Query: 1986 KGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDV- 2044
GE+E + K+ Y + + F +L IPR +N ADALA L+ + +D+
Sbjct: 1286 SGEYEAKNEKMDAYLKIVQLMTKDFENFKLSKIPRGDNAPADALAALA----LTSDSDLR 1341
Query: 2045 PLIKVQRLERPS-----HVFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQD 2099
+I V+ +++PS V + + + D W +I+ +L G D
Sbjct: 1342 RIIPVESIDKPSIDSTDAVEIVNTIRSSNAPDPADPTDWRVEIRDYL-----SDGTLPSD 1396
Query: 2100 KKTLRRL---ASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTHATGHTM 2156
K T RRL A+++ L + L K + +L C+ E ++M + H+G G H+ G +
Sbjct: 1397 KWTARRLRIKAAKYTLMKEHLLKVSAFGAMLNCLHGTEINEIMKETHEGAAGNHSGGRAL 1456
Query: 2157 SRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIG 2216
+ KL + G+YW M DC + KC +CQ +A IH P L +P+PF W +D++G
Sbjct: 1457 ALKLKKLGFYWPTMISDCKTFTAKCEQCQRHAPTIHQPTELLRAGVAPYPFMRWAMDIVG 1516
Query: 2217 RIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNG 2276
+ AS RFILV DYFTKWVEA SY + V F+ IICR+G+P +IITDNG
Sbjct: 1517 PM--PASRQKRFILVMTDYFTKWVEAESYATIRANDVQNFVWKFIICRHGLPYEIITDNG 1574
Query: 2277 TNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKD-WHEMLP 2335
+ + + C +KI + S+P PQ NG EA NK I ++K + K W + L
Sbjct: 1575 SQFISLSFENFCASWKIRLNKSTPRYPQGNGQAEATNKTILSGLKKRLDEKKGAWADELD 1634
Query: 2336 YALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLN 2395
L YRTT RS+T TPF+ YGMEA+ P EV SLR M K E + D+L+
Sbjct: 1635 GVLWSYRTTPRSATDQTPFAHAYGMEAMAPAEVGYSSLRRSMMVKNPELN-DRMMLDRLD 1693
Query: 2396 LIEEKRMDAMARGQSYQARMKTAFDKKVRPREFKVGELVLKRRISQQPD-PRGKWAPNYE 2454
+EE R A+ R Q+YQ +++KV R F VG+LVL++ + GK N+E
Sbjct: 1694 DLEEIRNAALCRIQNYQLAAAKHYNQKVHNRHFDVGDLVLRKVFENTAEINAGKLGANWE 1753
Query: 2455 GPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKYF 2491
G Y V K G L M G +P N+ +K+Y+
Sbjct: 1754 GSYQVSKIVRPGDYELLTMSGTAVPRTWNSMHLKRYY 1790
Score = 73.6 bits (179), Expect = 1e-12
Identities = 48/176 (27%), Positives = 82/176 (46%), Gaps = 7/176 (3%)
Query: 1060 FSEEELPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRS 1119
F++ +L HN L + + ++ VL+DTGSS++++ K L ++ ++
Sbjct: 555 FTDVDLEGLDTPHNDPLVVELIISDSRVTRVLIDTGSSVDLIFKDVLTAMNITDRQIKPV 614
Query: 1120 TFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTST 1179
+ + FDG +G I LPI +G V F V+ A Y+ +LG PWIH A+ ST
Sbjct: 615 SKPLAGFDGDFVMTIGTIKLPIFVGGLIAWVKFVVIGKPAVYNVILGTPWIHQMQAIPST 674
Query: 1180 LHQKLKFVKNGKLVTIHG-------EEAYLVSQLLSFSCIEAGSAEGTAFQGLTIE 1228
HQ +KF + + T+ +Y S+L + ++ T G+ E
Sbjct: 675 YHQCVKFPTHNGIFTLRAPKEAKTPSRSYEESELCRTEMVNIDESDPTRCVGVGAE 730
>At3g31530 hypothetical protein
Length = 831
Score = 461 bits (1185), Expect = e-129
Identities = 286/868 (32%), Positives = 448/868 (50%), Gaps = 126/868 (14%)
Query: 1539 SFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTH 1598
S+ ++ + + M+PED+EKT+F T G FCY+VMPFGL NAGATY+R + +F
Sbjct: 83 SYCHSWTLFVVMMMNPEDQEKTAFYTEQGIFCYRVMPFGLKNAGATYERFVNKIFALQIG 142
Query: 1599 KEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQK 1658
K +EVY+DDM+VKS E+ H+ +L + F++L Y ++LNP KC FGVRS
Sbjct: 143 KTMEVYIDDMLVKSMTEKDHISHLRECFKQLNLYNVKLNPAKCRFGVRS----------- 191
Query: 1659 GIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVW 1718
GIE +P ++ A+ M +P+ +++V+ GR+ ++RFIS T C + +LR+N+ W
Sbjct: 192 GIEANPKQIEALLGMASPQNKREVQCLTGRVAALNRFISRSTEKCLAFYDVLRRNKKFEW 251
Query: 1719 NDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYY 1778
C+EAF +KKYL PPIL PV G P +Y+AV D ++ L ++D +K I+Y
Sbjct: 252 TTRCEEAFQELKKYLATPPILAKPVIGEPQYLYVAVSDTAVSGELVREDRGEQK--LIFY 309
Query: 1779 LSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKI 1838
+S+ FT E+RY +EK A+ +A++LR Y +H+ ++ M P++ I + +G++
Sbjct: 310 VSQTFTSAESRYPQMEKLALAVVMSAQKLRPYFQSHSIIVMGSM-PLRVILHSPSQSGRL 368
Query: 1839 ARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEP 1898
A+W + LSEYDI ++ + K +LAD + P + + E P
Sbjct: 369 AKWTIELSEYDIEYQNKTCAKSQVLADFIVELPTKEAR-------------------ENP 409
Query: 1899 LIEEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACI 1958
L ++ W L DG+ + G G+G + SP G E TNN+AEYEA +
Sbjct: 410 L-------DTTWLLHVDGSSSKQGSGVGIRLTSPTG-----------EATNNVAEYEALV 451
Query: 1959 FGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHI 2018
G+ A ++I + DS L+ NQ GE+ T K+ Y + + L F + EL I
Sbjct: 452 AGLNLAWGLKIGKTRAFCDSQLIANQFNGEYTTQDKKMEAYLIHVQNLAKNFDEFELTRI 511
Query: 2019 PRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPS-------HVFAIGDVIDQAGEN 2071
PR EN ADALA L+S + +P V+ +E+PS HV I DQ +
Sbjct: 512 PRGENTSADALAALASTSDTSLKRVIP---VEFIEKPSIELGKEEHVLPIQISADQDDPD 568
Query: 2072 VVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVD 2131
+ W I ++ + P + K + L+ A+RF+L LYK L+ CV+
Sbjct: 569 DCN-SEWMEPIISYISEGKLP--SDKWKARKLKAQAARFVLVDTKLYKWRLSGPLMTCVE 625
Query: 2132 EHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKI 2191
++M ++H G+ +A I
Sbjct: 626 AEAICKIMKEIHSGS----------------------------------------HAPTI 645
Query: 2192 HVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTKQ 2251
H P L+ ++SP+PF W +D+IG + P S + +LV DYF+KW+EA SY ++
Sbjct: 646 HQPAELLSSIASPYPFMRWSMDIIGPMHP--SKQKKLVLVLTDYFSKWIEAESYASIKDA 703
Query: 2252 VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEA 2311
V F+ +I+CR+G+P +I+TDNG+ + Q C+++ I S+P PQ NG EA
Sbjct: 704 QVENFVLKHILCRHGIPYEIVTDNGSQFISTRFQGFCDKWGIRLSKSTPRYPQGNGQAEA 763
Query: 2312 ANKNIKRIVQKMVTTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIP 2371
AN+ L L +RTT R +T TPF+ +YG E V+P E+ +P
Sbjct: 764 ANE-------------------LEGVLWLHRTTPRRATRETPFASIYGTECVIPAEMIVP 804
Query: 2372 SLRVIMEAKLSEAEWCQSRYDQLNLIEE 2399
SLR + + ++ + Q+ D+L+LI+E
Sbjct: 805 SLRRSLSPE-NDPDNTQTPLDELDLIDE 831
Score = 41.6 bits (96), Expect = 0.006
Identities = 42/142 (29%), Positives = 57/142 (39%), Gaps = 21/142 (14%)
Query: 1134 LGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNG--- 1190
LG I LP+ +V F + D Y+ ++G PW++ AV ST H LKF +
Sbjct: 3 LGTIKLPVRAKGVTKIVDFSITDQPTVYNAIIGTPWLNQFRAVASTYHLCLKFPTSDSVW 62
Query: 1191 -KLVTIHGEEAYLVSQLLSFS-----------CIEAGSAEGTAF---QGLTIEGAEP--- 1232
KL E +QLL S + E TAF QG+ P
Sbjct: 63 EKLGHERAEAVKAENQLLETSYCHSWTLFVVMMMNPEDQEKTAFYTEQGIFCYRVMPFGL 122
Query: 1233 KEAGAAMASLKDAQRAIQEGQT 1254
K AGA + A+Q G+T
Sbjct: 123 KNAGATYERFVNKIFALQIGKT 144
>At2g15410 putative retroelement pol polyprotein
Length = 1787
Score = 402 bits (1033), Expect = e-111
Identities = 203/497 (40%), Positives = 309/497 (61%), Gaps = 24/497 (4%)
Query: 1363 IPYEITRLLEQEKKAIQPHQEEIELVNIGTEENKREIKIGATLEEGVKRKIIQLLREYPD 1422
I Y + + Q+++ P + + VNI + R + I L ++ +++ LR+
Sbjct: 695 IIYNVILVPTQDERP-NPQKGTVVQVNIDESDPSRCVGIRIDLPSELQNELVNFLRQNAA 753
Query: 1423 IFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMT 1482
FAWS EDMPG+D + H + P P++QK R+ PD + EV+K +DAG ++
Sbjct: 754 TFAWSVEDMPGIDSAVTCHELNVDPTYKPLKQKRRKLGPDRTKDVNEEVKKLLDAGSIVE 813
Query: 1483 VEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMD 1542
V YP+W+ N V V KK+GK R+C+DF DLNKA PKD+FPLPHID LV+ TA +++ SFMD
Sbjct: 814 VRYPDWLRNPVVVKKKNGKWRVCIDFTDLNKACPKDSFPLPHIDRLVEATAGNELLSFMD 873
Query: 1543 GFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVE 1602
FSGYNQI M DREKT FIT GT+CYKVMPFGL NAGATY R + +F D +E
Sbjct: 874 AFSGYNQILMHQNDREKTVFITDQGTYCYKVMPFGLKNAGATYPRLVNQMFTDQLDHSME 933
Query: 1603 VYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEV 1662
VY+DDM+VKS E+H+ +L + F+ L +Y ++LNP+KCTFGV SG+ LG++V+++GIE
Sbjct: 934 VYIDDMLVKSLRAEEHITHLRQCFQVLNRYNMKLNPSKCTFGVTSGEFLGYLVTRRGIEA 993
Query: 1663 DPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDEC 1722
+P ++ AI ++P+PR ++V+ +GR+ ++RFIS T C P ++LLR N+ W+++C
Sbjct: 994 NPKQISAIIDLPSPRNTREVQRLIGRIAALNRFISRSTDKCLPFYQLLRANKRFEWDEKC 1053
Query: 1723 QEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKK 1782
+ EG L +Y+AV ++ VL ++D ++H I+Y+SK
Sbjct: 1054 E--------------------EGETLYLYIAVSTSAVSGVLVREDR--GEQHPIFYVSKT 1091
Query: 1783 FTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQ 1842
E RY LEK A+ +A++LR Y ++T +++ P++ I + +G++A+W
Sbjct: 1092 LDGAELRYPTLEKLAFAVVISARKLRPYFKSYTVEVLTN-QPLRTILHSPSQSGRLAKWA 1150
Query: 1843 MLLSEYDIVFKTQKAIK 1859
+ LSEYDI +K + K
Sbjct: 1151 VELSEYDIAYKNRTCAK 1167
Score = 318 bits (816), Expect = 2e-86
Identities = 204/608 (33%), Positives = 299/608 (48%), Gaps = 72/608 (11%)
Query: 1945 FECTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYAR 2004
F +NN AEYEA I G+ A + +K + Y DS LV +Q G +E + ++ Y R
Sbjct: 1190 FPASNNEAEYEALIAGLRLAHGIEVKKIQAYCDSQLVASQFSGNYEAKNERMDAYLKVVR 1249
Query: 2005 RLLTYFTKVELHHIPRDENQMADALATLSSMFRVN-------HWNDVPLIKVQ-RLERPS 2056
L F EL IPR +N ADALA L+S + DVP IK+Q + +PS
Sbjct: 1250 ELSYNFEVFELTKIPRSDNAPADALAVLASTSDPDLRRVIPVECIDVPSIKIQGTITKPS 1309
Query: 2057 HVFAIGDVIDQAGENVVDYKP--------------------------------------- 2077
I +Q +V P
Sbjct: 1310 EYTVIDLTAEQLSIVMVILPPATDRSEDAGPSGNLVCSSDPGQSSGCDRSDDSNRSADSD 1369
Query: 2078 ------WYYDIKQFLLSREYPPGASKQDKKTLRRLASR---FLLDGDILYKRNYDMVLLR 2128
W +I+ ++ R P +DK RRL +R + L + L + + VLL
Sbjct: 1370 SPASTNWIEEIRSYIADRIVP-----KDKWAARRLRARSAQYTLPHEHLLRWSATGVLLS 1424
Query: 2129 CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYA 2188
C+D+ EA+Q+M ++H+G G H+ G ++ K+ + G YW M DC ++ +C KCQ +A
Sbjct: 1425 CLDDEEAQQVMREIHEGAGGNHSGGRALALKIRKHGQYWPTMNADCEKFVARCEKCQGHA 1484
Query: 2189 DKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 2248
IH+P L P+PF W +D+I AS ++ILV DYFTKW EA SY +
Sbjct: 1485 PFIHIPSEVLQTAMPPYPFMRWAMDIIRPF--PASRQKKYILVMTDYFTKWFEAESYARI 1542
Query: 2249 TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 2308
+ V F+ NIIC +G+P +I+TDNGT + + C ++KI S+P PQ NG
Sbjct: 1543 QSKEVQNFVWKNIICHHGLPYEIVTDNGTQFTSLQFEGFCAKWKIRLSKSTPRYPQCNGQ 1602
Query: 2309 VEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2367
EA NK I ++K + K W + L L YRTT R ST TPFSL YGMEA+ P E
Sbjct: 1603 AEATNKTILDGLKKRLDEKKGAWADELDGVLWSYRTTPRRSTDRTPFSLTYGMEALAPCE 1662
Query: 2368 VEIPSLR---VIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVR 2424
+P++R +I + L++ Q D L+ +EE+R A+ R Q+YQ ++KKV+
Sbjct: 1663 AGLPTVRRSMLINDPTLND----QMLLDNLDTLEEQRDQALLRIQNYQQAAAKFYNKKVK 1718
Query: 2425 PREFKVGELVLKRRISQQPD-PRGKWAPNYEGPYVVKKAFSGGALILTHMDGVELPNPVN 2483
R F G+LVL++ + GK ++EGPY++ K G L MDG +P N
Sbjct: 1719 NRLFAEGDLVLRKVFENTVEQDAGKLGAHWEGPYLISKVVKPGVYELLTMDGTPIPRSWN 1778
Query: 2484 ADIVKKYF 2491
+ +K+Y+
Sbjct: 1779 SANLKRYY 1786
>At2g13330 F14O4.9
Length = 889
Score = 380 bits (976), Expect = e-105
Identities = 205/538 (38%), Positives = 302/538 (56%), Gaps = 59/538 (10%)
Query: 1497 KKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPED 1556
+K+GK R+C+DFRDLNKA PKD+FPLPHID LV+ T + + SFMD F GYNQI M +
Sbjct: 289 EKNGKWRVCIDFRDLNKACPKDSFPLPHIDRLVEATVEHEKLSFMDAFYGYNQILMRRDG 348
Query: 1557 REKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEE 1616
+EKT+FIT GT+ YKVMPFGL NAG TYQR + +F D K +EVY+DDM+VKS E+
Sbjct: 349 QEKTAFITDRGTYYYKVMPFGLKNAGTTYQRLVNRMFVDQLGKTIEVYIDDMLVKSAHEK 408
Query: 1617 QHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAP 1676
HV L + F+ L K++++LNP KC+F V+S + L ++V+++GIE +P ++ A EMP+P
Sbjct: 409 DHVPQLRECFKILIKFEMKLNPEKCSFEVQSREFLEYLVTERGIEANPKQIAAFIEMPSP 468
Query: 1677 RTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEP 1736
+ ++V+ GR+ ++ FIS C P ++ LRK + WN +C++AF +K YL EP
Sbjct: 469 KMAREVQRLTGRIPALNGFISRSANKCVPFYQPLRKGKEFDWNKDCEQAFKQLKAYLTEP 528
Query: 1737 PILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKT 1796
PIL P +G PL +Y T+ + R +EK
Sbjct: 529 PILAKPEKGEPLYLY--------------------------------TNRDKRCPAMEKL 556
Query: 1797 CCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQK 1856
+ + ++LR Y +H ++ PI+ I +G++A+W + L EYDI ++T+
Sbjct: 557 ALTVVMSVRKLRLYFQSHPI-VVMTSQPIRTILHSLTQSGRLAKWAIELREYDIEYRTRT 615
Query: 1857 AIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCEEPLIEEGPDPNSKWGLVFDG 1916
++K +LAD + PL D +G + N KW L DG
Sbjct: 616 SLKAQVLADFVIKLPLADL--------------------------DGTNSNKKWLLHVDG 649
Query: 1917 AVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEYEACIFGIEEAIDMRIKHLDIYG 1976
+ N G G+G + SP G I + ++ F +NN +EYEA I GI+ A + I+ + Y
Sbjct: 650 SSNRQGSGVGIQLTSPTGEVIEQSLQLGFNASNNESEYEALIAGIKLAQEKGIREIHAYS 709
Query: 1977 DSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSS 2034
DS LV +Q GE+E ++ Y + + L F +L IPR EN AD LA L+S
Sbjct: 710 DSQLVTSQFHGEYEAKDERMEAYLELVKTLAQQFESFKLTRIPRGENTSADTLAALAS 767
Score = 74.3 bits (181), Expect = 8e-13
Identities = 43/144 (29%), Positives = 73/144 (49%)
Query: 1056 NNLWFSEEELPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTP 1115
+ + F E E+ + K H+ AL I ++ + +S ++VDTGSS++V+ + + +
Sbjct: 45 DGITFWESEITDLDKPHDDALVIRIDVGNYELSCIMVDTGSSVDVLFYDAFKRTGHLDSK 104
Query: 1116 LRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGA 1175
L+ + F G +G I LP L F V+D A ++ +LGRPW+H A
Sbjct: 105 LQGRKTPLTGFAGDTTFSIGTIQLPTIARGVRQLTNFLVVDKKAPFNAILGRPWLHVMKA 164
Query: 1176 VTSTLHQKLKFVKNGKLVTIHGEE 1199
V ST HQ +KF + ++G +
Sbjct: 165 VPSTYHQCIKFPSYKGIAVVYGSQ 188
Score = 32.7 bits (73), Expect = 2.7
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 1385 IELVNIGTEENKREIKIGATLEEGVKRKIIQLLREYPDIFAWSYEDMPGL 1434
I V I + KR + IG L+ V+ +I L+E D FAWS ++ G+
Sbjct: 237 ITQVCIDESDPKRCVGIGHDLDLTVREDLITFLKENKDSFAWSSANLQGI 286
>At2g14400 putative retroelement pol polyprotein
Length = 1466
Score = 323 bits (829), Expect = 6e-88
Identities = 158/355 (44%), Positives = 239/355 (66%), Gaps = 2/355 (0%)
Query: 1457 RRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASP 1516
R+ + A + EV K + G + V+YP+W+AN V V KK+GK R+C+DF DLNKA P
Sbjct: 470 RKLGVERAKAVNDEVDKLLKIGSIREVQYPDWLANTVVVKKKNGKDRVCIDFTDLNKACP 529
Query: 1517 KDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPF 1576
KD+FPLPHID LV++TA +++ SFMD FSGYNQI M+PED+EKT FIT G +CYKVMPF
Sbjct: 530 KDSFPLPHIDRLVESTAGNELLSFMDAFSGYNQIMMNPEDQEKTLFITDRGIYCYKVMPF 589
Query: 1577 GLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRL 1636
GL NAGATY R + +F + K +EVY+DDM++KS +E HV++L + F L +Y+++L
Sbjct: 590 GLRNAGATYPRLVNKMFSEHVGKTMEVYIDDMLIKSLKKEDHVKHLEECFAILNQYQMKL 649
Query: 1637 NPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFI 1696
NP KCTFGV SG+ LG+IV+++GIE +P+++ A MP+P+ K+V+ GR+ ++RFI
Sbjct: 650 NPAKCTFGVPSGEFLGYIVTKRGIEANPNQINAFLNMPSPKNFKEVQRLTGRIAALNRFI 709
Query: 1697 SHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFD 1756
S T P +++L+ N+ +W+++C+EAF +K YL PP+L P L +Y++V +
Sbjct: 710 SRSTDKSLPFYQILKGNKEFLWDEKCEEAFGQLKAYLTSPPVLFKPELDEKLYLYVSVSN 769
Query: 1757 ESMGCVLGQQDETGKKEHAIYYLSKKFT-DCETRYTMLEKTCCALAWAAKRLRHY 1810
++ VL ++D G+++ Y + +F D E + + +E + AK R +
Sbjct: 770 HAVSGVLIREDR-GEQKPIYYIIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKF 823
Score = 224 bits (570), Expect = 6e-58
Identities = 162/538 (30%), Positives = 255/538 (47%), Gaps = 80/538 (14%)
Query: 1980 LVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVELHHIPRDENQMADALATLSSMF--R 2037
+++NQ G++E +++ Y + L F K EL IPR +N ADALA L+S
Sbjct: 790 IIVNQFNGDYEAKDSRMEAYLHVVKDLAKNFRKFELIRIPRGQNTTADALAALASTSDPE 849
Query: 2038 VNHWNDVPLIKVQRLERPSHVFAIGDVIDQA---GENVVDYKPWYYDIKQFLLSREYPPG 2094
VN V I + ++ F + A G+ V+ P +K+ P
Sbjct: 850 VNSIIPVECISERSIKEEKEAFVVTRSRAAARDRGDTAVELPP----VKRRKSKEATVPK 905
Query: 2095 ASKQDKKTLRRLASRFL-----------LDGDIL--------------YKRNYDMVLLRC 2129
+ Q+ + + +D DIL Y+R L
Sbjct: 906 PAVQENIGIELIEEVISDAKIEAETEPWVDEDILAPNEHPEPEALNSLYRRGVSDPYLLS 965
Query: 2130 VDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYAD 2189
+ E +M +VH+G G+H++G M+ K+ + YYW M DC +YA++C +CQ++A
Sbjct: 966 IFGPVVEIVMSEVHEGLCGSHSSGRAMAFKIKKMCYYWPTMITDCVKYAQRCKRCQLHAP 1025
Query: 2190 KIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVT 2249
IH P + +S+P+PF W +D+IG + +++ G +++LV DYF+KW+EA +
Sbjct: 1026 LIHQPSELFSSISAPYPFMRWSMDIIGPLH-RSTRGVQYLLVLTDYFSKWIEAEA----- 1079
Query: 2250 KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAV 2309
I+ +G+ K+ + S+ PQ NG
Sbjct: 1080 -----------ILLNWGI------------------------KVSY--STLRYPQGNGQA 1102
Query: 2310 EAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEV 2368
EAANK I ++K + K W++ L L YRTT R STG TPFSLVYGM+AV+P E+
Sbjct: 1103 EAANKTILSNLKKRLNHLKGGWYDELQPVLWAYRTTPRRSTGETPFSLVYGMKAVVPAEL 1162
Query: 2369 EIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRPREF 2428
+P LR EA L+E E D L+ I E+R A+ + Q+YQ ++ KV+ R F
Sbjct: 1163 NVPGLR-RTEAPLNEKENSAMLDDSLDTINERRDQALIQIQNYQHAAARYYNSKVKSRPF 1221
Query: 2429 KVGELVLKRRI-SQQPDPRGKWAPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNAD 2485
VG+ VLKR +++ + GK N+EGPY+V + G L ++ + P N +
Sbjct: 1222 FVGDYVLKRVFDNKKEEGAGKLGINWEGPYIVTEVVRNGVYRLKDLEDRPVQRPWNVN 1279
Score = 39.3 bits (90), Expect = 0.029
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 1057 NLWFSEEELPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPL 1116
++ F E+E +SH+ AL ++++ + +S +L+DTGSS++++ +TL+++ +
Sbjct: 408 SILFDEKETQHLERSHDDALVVTLDVANFEVSRILIDTGSSVDLIFLSTLERMGISRADV 467
Query: 1117 RRSTFLVKAFDGSRKNVLGEIDLPITIG 1144
R V+ K V E+D + IG
Sbjct: 468 NRRKLGVE----RAKAVNDEVDKLLKIG 491
>At2g15100 putative retroelement pol polyprotein
Length = 1329
Score = 311 bits (796), Expect = 4e-84
Identities = 224/786 (28%), Positives = 378/786 (47%), Gaps = 98/786 (12%)
Query: 1717 VWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAI 1776
+WN+ C+EAF +K+YL EP +L G L +Y+AV + ++ V + + + K+ I
Sbjct: 630 IWNESCEEAFKQLKRYLSEPSVLAKREFGEQLFLYIAVSESAVTGVQVRVERSDKR--PI 687
Query: 1777 YYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTG 1836
+Y+ +TRY M+EK A+ AA++LR Y +H +++ + P++ I +G
Sbjct: 688 FYV-------KTRYPMMEKLALAVVTAARKLRPYFQSHPIVVLTSL-PLRTILHSPTQSG 739
Query: 1837 KIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEEIMYLKSKDCE 1896
++ +W + LSE+D+ F+ + ++ ++ ++ F +++S++
Sbjct: 740 RLGKWAIELSEFDLEFRARTSLNSTMDTSR------------QWGFIK---TWVRSRN-- 782
Query: 1897 EPLIEEGPDPNSKWG--LVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFECTNNMAEY 1954
+ + P N G D + AY + V G F + N+ A
Sbjct: 783 ---LSDAPTANRYSGEYEAKDACMEAYLNLVREV----SGRFEQFELTRIPRAENSAANA 835
Query: 1955 EACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRLLTYFTKVE 2014
A + E R+ ++ ++ +++I + R RRL +
Sbjct: 836 LAALASTFEVTLPRVIPVETISQPSIRLDEI---------SFVTTRAMRRRLDAQSAENG 886
Query: 2015 LHHIPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENVVD 2074
LH + DE +++DA+ P+ + + D + D
Sbjct: 887 LHQLGDDE-EISDAV------------------------HPTEIVENQSLPDNHNAPLPD 921
Query: 2075 YKP--WYYD----IKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLR 2128
P W D I+ ++L+ P A K + L+ +RF + DILY+R +
Sbjct: 922 QPPHDWGADWREPIRDYILNGTLP--AEKWAARKLKATCARFCIANDILYRRIFSAPDAV 979
Query: 2129 CVDEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYA 2188
C+ + +M +VHDGT G H G +++ K+ + GYYW + DC YARKC +CQ +A
Sbjct: 980 CIFGEQTRTVMKEVHDGTCGNHTGGRSLAFKVRKYGYYWPTLVADCEAYARKCEQCQKHA 1039
Query: 2189 DKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNV 2248
I P L +S+P+PF W +D++G + T+ VEAA+Y+N+
Sbjct: 1040 PLILQPAELLTTVSAPYPFMKWLMDIVGPLHVS---------------TRGVEAAAYSNI 1084
Query: 2249 TKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 2308
T V FI +IICR+G+P +I+TDNG+ + + CEE++I +S+P PQ NG
Sbjct: 1085 THVQVWNFIWKDIICRHGLPYEIVTDNGSQFISEQFEVFCEEWQIRLSHSTPRYPQGNGQ 1144
Query: 2309 VEAANKNIKRIVQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2367
EA NK I ++K + YK W L L RTT R +T TPFSL+YGMEAV+P E
Sbjct: 1145 AEAMNKTIISNLKKKLNAYKGAWFGELQNVLWAVRTTPRRATDETPFSLIYGMEAVIPAE 1204
Query: 2368 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRPRE 2427
+++PS R I + +E E + D ++ I+E+R A+AR Q+Y ++ VR R
Sbjct: 1205 IKVPSARRIRNPQ-NETENNEMIIDVIDTIDERRNRALARMQNYHNAGARYYNSNVRNRS 1263
Query: 2428 FKVGELVLKRRISQQPDPR--GKWAPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNAD 2485
F+VG LVL RR+ Q + GK ++EGPY + G L +M+G + N+
Sbjct: 1264 FEVGTLVL-RRVQQNKAEKGAGKLGISWEGPYKITHVVRNGVYRLINMEGKTVRRAWNSM 1322
Query: 2486 IVKKYF 2491
+K+++
Sbjct: 1323 HLKRFY 1328
Score = 172 bits (436), Expect = 2e-42
Identities = 84/151 (55%), Positives = 106/151 (69%)
Query: 1431 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVA 1490
M G+ ++ H + P PV+QK R+ PD A + EV + ++ G + V+YPEW+A
Sbjct: 412 MTGISTEVISHELNVDPTFKPVKQKRRKLGPDRAQAVNIEVVRLLEVGRIREVKYPEWLA 471
Query: 1491 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1550
N V V KK+GK R+CVDF DLNKA KD FPLPHID LV++T ++ SFMD FSGYNQI
Sbjct: 472 NPVVVKKKNGKWRVCVDFTDLNKACSKDFFPLPHIDRLVESTTGHEMLSFMDAFSGYNQI 531
Query: 1551 KMSPEDREKTSFITPWGTFCYKVMPFGLINA 1581
M+PED+EKTSFIT GT+ YKVMPFGL NA
Sbjct: 532 LMNPEDQEKTSFITECGTYYYKVMPFGLKNA 562
Score = 47.0 bits (110), Expect = 1e-04
Identities = 35/107 (32%), Positives = 51/107 (46%), Gaps = 6/107 (5%)
Query: 1096 SSLNVMPKTTLDQLSYRGTPLRR---STFLVKAFDGSRKNVLGEIDLPITIGPENFLVTF 1152
S+ N PK + + T LR+ T + S LG + LP+T +V F
Sbjct: 314 SASNAAPKAPQPATTKKPTELRKPAAGTCTTMLCETSMS--LGTVVLPVTAQGVVKMVEF 371
Query: 1153 QVMDINASYSCLLGRPWIHDAGAVTSTLHQKLKF-VKNGKLVTIHGE 1198
V D A+Y+ +LG PW+++ V ST HQ +KF GK+ I E
Sbjct: 372 TVFDRPAAYNVILGTPWLYEMKVVPSTYHQCVKFPTPVGKMTGISTE 418
>At2g14380 putative retroelement pol polyprotein
Length = 764
Score = 295 bits (755), Expect = 2e-79
Identities = 141/282 (50%), Positives = 196/282 (69%)
Query: 1430 DMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWV 1489
DM G+DP + H + P V+QK R+ P+ + + EV K +DAG ++ V+YPEW+
Sbjct: 476 DMVGIDPEVACHELNVDPTFKLVKQKRRKLGPERSKAVNDEVDKLLDAGSIVEVKYPEWL 535
Query: 1490 ANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQ 1549
AN V V KK+ K R+C+DF DLNKA PKD+FPLPHID +V+ T +++ SFMD FSGYNQ
Sbjct: 536 ANPVVVKKKNDKWRVCIDFTDLNKACPKDSFPLPHIDRMVEATTGNELLSFMDAFSGYNQ 595
Query: 1550 IKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMI 1609
I M +D+EKTSFI GT+CYKVMPFGL N GA YQR + +F K +EVY+DDM+
Sbjct: 596 IPMHKDDQEKTSFIIDRGTYCYKVMPFGLKNVGARYQRLVNQMFAPQLGKTMEVYIDDML 655
Query: 1610 VKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRA 1669
VKST H+++L FE L KY ++LNP KC FGV SG+ LG+IV+++GIE +P ++RA
Sbjct: 656 VKSTRSADHIDHLKACFETLNKYNMKLNPAKCLFGVTSGEFLGYIVTKRGIEANPKQIRA 715
Query: 1670 IREMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLR 1711
I ++ +PR +K+V+ GR+ ++RFI+ T P ++LLR
Sbjct: 716 ILDLQSPRNKKEVQRLTGRIAGLNRFIARSTDKSLPFYQLLR 757
Score = 81.6 bits (200), Expect = 5e-15
Identities = 57/195 (29%), Positives = 88/195 (44%), Gaps = 27/195 (13%)
Query: 1032 EQAYVDHEVTVDRFGGIVGNITACNN---------------LW------------FSEEE 1064
+Q + D V R I+G +TAC + LW F+ E+
Sbjct: 277 DQQHNDAPVPRRRVNMIMGGLTACRDSFRSIKEYIKSGAATLWSSPATKEMTPLTFTSED 336
Query: 1065 LPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGTPLRRSTFLVK 1124
L HN L I ++ ++ +L+DTGSS+NV+ K L ++ ++ S +
Sbjct: 337 LFGVDLPHNDPLVIELHIGESEVTRILIDTGSSVNVVFKDVLQKMKVHDRHIKPSVRPLT 396
Query: 1125 AFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAGAVTSTLHQKL 1184
FDG+ G I LPI +G F V+D Y+ +LG PWIHD A+ S+ HQ +
Sbjct: 397 GFDGNTMMTNGTIKLPIYLGGAATWHKFVVVDKPTIYNIILGTPWIHDMQAIPSSYHQCI 456
Query: 1185 KFVKNGKLVTIHGEE 1199
K + + TI G +
Sbjct: 457 KIPTSIGIETIRGNQ 471
>At1g37200 hypothetical protein
Length = 1564
Score = 284 bits (727), Expect = 4e-76
Identities = 136/298 (45%), Positives = 197/298 (65%), Gaps = 4/298 (1%)
Query: 1380 PHQEEIELVNIGTEENKREIKIGATLEEGVKRKIIQLLREYPDIFAWSYEDMPGLDPMIV 1439
P + I V I + K+ + +G L+ ++ I L+E D FAWS ++ G+ +
Sbjct: 614 PQKSSITQVYIDESDPKQCVGVGQDLDPAIREDFITFLKENKDSFAWSSANLQGISLEVT 673
Query: 1440 EHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKD 1499
H + P P++QK R+ P+ A ++ EV + + G + V+YP+W+AN V V K+
Sbjct: 674 SHELNVDPTYRPIKQKRRKLGPERAKAVQDEVDRLLKIGSIREVKYPDWLANPVVVKNKN 733
Query: 1500 GKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREK 1559
GK R+C+DF DLNKA PKD+FPLPHID LV TA ++ SFMD FSGYNQI M P+D+EK
Sbjct: 734 GKWRVCIDFMDLNKACPKDSFPLPHIDRLVKATAGHELLSFMDAFSGYNQILMRPDDQEK 793
Query: 1560 TSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHV 1619
T+FIT CYKVMPFGL N GATYQR + +F D K +E+Y+DDM+VKS E+ H+
Sbjct: 794 TAFITD----CYKVMPFGLKNTGATYQRLVNRMFADQLGKTMELYIDDMLVKSAHEKDHL 849
Query: 1620 EYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPR 1677
L + F+ L K++++LNP KC+FGV SG+ LG++V+Q+GIE +P ++ A +MP+P+
Sbjct: 850 PQLRECFKILNKFEMKLNPEKCSFGVPSGEFLGYLVTQRGIEANPKQIAAFIDMPSPK 907
Score = 245 bits (625), Expect = 3e-64
Identities = 167/555 (30%), Positives = 261/555 (46%), Gaps = 91/555 (16%)
Query: 1767 DETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIK 1826
D G+K IYY+SK D ET Y +EK A+ +A++LR YL +H ++ PI+
Sbjct: 927 DHEGQKP--IYYVSKTLIDAETHYRAMEKLALAVVMSARKLRQYLQSHPI-VVMTSQPIR 983
Query: 1827 YIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDDYQPIEFDFPDEE 1886
I + ++A+W + LSEYDI ++T+ + K +LAD + PL D
Sbjct: 984 TILHSTTQSSRLAKWAIELSEYDIEYRTRTSFKAQVLADFVIELPLADL----------- 1032
Query: 1887 IMYLKSKDCEEPLIEEGPDPNSKWGLVFDGAVNAYGKGIGAVIVSPQGHHIPFTARILFE 1946
+G + N KW L DG+ N G G G + SP G I + R+ F
Sbjct: 1033 ---------------DGTNSNKKWLLHVDGSSNRQGSGEGIQLTSPTGEVIEQSFRLGFN 1077
Query: 1947 CTNNMAEYEACIFGIEEAIDMRIKHLDIYGDSALVINQIKGEWETHHAKLIPYRDYARRL 2006
+NN +EYEA I GI+ A MRI+ + + DS LV +Q GE+E ++ Y + + L
Sbjct: 1078 ASNNESEYEALIDGIKLAQGMRIRDIHAHSDSQLVTSQFHGEYEAKDERMEAYLELVKTL 1137
Query: 2007 LTYFTKVELHHIPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAI----- 2061
F EL IPR EN DALA L+S +P V+ +E PS +
Sbjct: 1138 TQQFESFELTRIPRGENTSTDALAALASTLDPFVKRIIP---VEGIEHPSIDLTVKHAGM 1194
Query: 2062 ----------------------------GDVIDQA----GENVVDYKP-----WYYDIKQ 2084
G ++A E + Y+P W I
Sbjct: 1195 ETSATCNFTRVTRSTTAAARALAAAAEAGAAEEEAKLRTPEQLASYEPEPYNDWRIPIID 1254
Query: 2085 FLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAEQLMHDVHD 2144
++ PP K + + L+ ++R+ + L KR+ + C + + LM +H+
Sbjct: 1255 YIERGITPP--DKWETRKLKAQSARYCIMEGRLMKRSVAGPYMVCTYGQQTKDLMKSMHE 1312
Query: 2145 GTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSP 2204
G G+H +G T+ +L DC ++ +C KCQ +A +H PP ++ +SSP
Sbjct: 1313 GQCGSHYSGRTLRCIMLA----------DCIAHSLRCDKCQRHAPTLHQPPEEMSSISSP 1362
Query: 2205 WPFSMWGIDMIGRIEPKASNGH---RFILVAIDYFTKWVEAASYTNVTKQVVAKFIKNNI 2261
+PF W +D++ +E AS G + +LV DY TKW+E ++ VT++ V F+ NI
Sbjct: 1363 YPFMKWSMDVVRPME--ASGGKKRLKNLLVLTDYSTKWIEGKAFQQVTEKQVEVFLLENI 1420
Query: 2262 ICRYGVPSKIITDNG 2276
+ R+G+P +I+TDNG
Sbjct: 1421 VYRHGIPYEIVTDNG 1435
Score = 52.8 bits (125), Expect = 3e-06
Identities = 34/98 (34%), Positives = 53/98 (53%), Gaps = 2/98 (2%)
Query: 2395 NLIEEKRMDAMARGQSYQARMKTAFDKKVRPREFKVGELVLKRRISQQPD-PRGKWAPNY 2453
+ I+E+R AM + Q+YQ ++ ++ R F+VGELVL++ S + GK N+
Sbjct: 1465 DFIDERRDHAMIQVQNYQQPAVRYYNSNIKIRRFEVGELVLRKVFSNTRELNAGKLGTNW 1524
Query: 2454 EGPYVVKKAFSGGALILTHM-DGVELPNPVNADIVKKY 2490
EGPY + + G L + +GV P NA +KKY
Sbjct: 1525 EGPYRITEVVRDGIYKLVKVFNGVPELRPWNAMHLKKY 1562
Score = 43.1 bits (100), Expect = 0.002
Identities = 25/90 (27%), Positives = 45/90 (49%), Gaps = 6/90 (6%)
Query: 1159 ASYSCLLGRPWIHDAGAVTSTLHQKLKFVKNGKLVTIHGEE-----AYLVS-QLLSFSCI 1212
A ++ +LGRPW+H AV ST HQ +KF + I+G + Y+ S +L+ + +
Sbjct: 530 APFNAILGRPWLHAMKAVPSTYHQCIKFPSEKGIAVIYGSQRSSRRCYMGSYELIKKAEL 589
Query: 1213 EAGSAEGTAFQGLTIEGAEPKEAGAAMASL 1242
E + T+ ++P + G +S+
Sbjct: 590 VVLMIEDKLAEMKTVRSSDPSQCGPQKSSI 619
>At4g03800
Length = 637
Score = 275 bits (702), Expect = 3e-73
Identities = 139/337 (41%), Positives = 213/337 (62%), Gaps = 21/337 (6%)
Query: 1431 MPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVA 1490
MP +DP I+ H + P P++QK R+ + A + ++ K + G + V+YP+WVA
Sbjct: 321 MPDIDPSIICHELNVDPRFKPLKQKRRKLGVERAKAVNGKIDKLLKIGSIREVQYPDWVA 380
Query: 1491 NIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQI 1550
V V KK+GK R+C+DF DLNKA PKD+FPLPHID LV++TA +++ +FMD F GYNQI
Sbjct: 381 ITVVVKKKNGKDRVCIDFTDLNKACPKDSFPLPHIDRLVESTAGNELLTFMDAFLGYNQI 440
Query: 1551 KMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIV 1610
M+PED+EKTSFIT + GATYQ + +F++ K +EV +DD +V
Sbjct: 441 MMNPEDQEKTSFIT---------------DRGATYQWLVNKMFNEHLRKTMEVSIDDTLV 485
Query: 1611 KSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAI 1670
KS +E HV++L + FE L +Y+++LN KCTFGV SG+ LG+IV+++GIE +P+++ A
Sbjct: 486 KSLKKEDHVKHLGECFEILNQYQMKLNLAKCTFGVPSGEFLGYIVTKRGIEANPNQINAF 545
Query: 1671 REMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIK 1730
+ P+ R K+V+ GR+ S T P +++L+ N +W+++C+EAF +K
Sbjct: 546 LKTPSLRNFKEVQRLTGRI------ASRSTDKSLPFYQILKGNNGFLWDEKCEEAFRQLK 599
Query: 1731 KYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQD 1767
YL PP+L P L +Y+ V + ++ VL ++D
Sbjct: 600 AYLTTPPVLSKPEADEKLYLYVFVSNHAVSGVLVRED 636
Score = 77.8 bits (190), Expect = 7e-14
Identities = 51/144 (35%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 1055 CNNLWFSEEELPEAGKSHNLALHISVNCKSDMISNVLVDTGSSLNVMPKTTLDQLSYRGT 1114
C+++ F EEE + H+ AL I+++ + IS +LVDTGSS++++ + G
Sbjct: 182 CSSVSFDEEETRHIERPHDDALIITLDVANFKISRILVDTGSSVDLI---------FLGP 232
Query: 1115 PLRRSTFLVKAFDGSRKNVLGEIDLPITIGPENFLVTFQVMDINASYSCLLGRPWIHDAG 1174
P + AF LG I LP+ G + +V F V D A+Y+ +LG PWI
Sbjct: 233 PSP-----LVAFTSESAMSLGTIKLPVLAGKMSKIVDFVVFDKPATYNIILGTPWIFQMK 287
Query: 1175 AVTSTLHQKLKFVKNGKLVTIHGE 1198
AV ST HQ LKF + + TI G+
Sbjct: 288 AVPSTYHQWLKFPTSNGVETIWGD 311
>At2g10780 pseudogene
Length = 1611
Score = 267 bits (682), Expect = 7e-71
Identities = 162/477 (33%), Positives = 252/477 (51%), Gaps = 24/477 (5%)
Query: 1384 EIELVNIGTEENKREIKIGATLEEGVKRKIIQLLREYPDIFAWSYEDMPGL-DPMIVEHR 1442
E L I T+E +GA+ E K I ++ E+ D+FA P DP +E
Sbjct: 605 EAYLATITTKE------VGASAE----LKDIPIVNEFSDVFAAVSGVPPDRSDPFTIE-- 652
Query: 1443 IPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKV 1502
+P P+ + R P K+K ++++ +D GF+ P W A ++ V KKDG
Sbjct: 653 --LEPGTTPISKAPYRMAPAEMAKLKKQLEELLDKGFIRPSSSP-WGAPVLFVKKKDGSF 709
Query: 1503 RMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 1562
R+C+D+R LNK + K+ +PLP ID L+D ++ FS +D SGY+QI + P D KT+F
Sbjct: 710 RLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAF 769
Query: 1563 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYL 1622
T + F + VMPFGL NA A + + M +F D + V ++++D++V S E H E+L
Sbjct: 770 RTRYDHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFINDILVYSKSWEAHQEHL 829
Query: 1623 TKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQV 1682
+ ERLR+++L +KC+F RS LG ++S +G+ VDP+K+R+I+E P PR ++
Sbjct: 830 RAVLERLREHELFAKLSKCSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEI 889
Query: 1683 RGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPP 1742
R FLG Y RF+ + P+ +L K+ W+DEC+++F +K L P+LV P
Sbjct: 890 RSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLTNAPVLVLP 949
Query: 1743 VEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAW 1802
EG P +Y +GCVL Q K I Y S++ E Y + A+ +
Sbjct: 950 EEGEPYTVYTDASIVGLGCVLMQ------KGSVIAYASRQLRKHEKNYPTHDLEMAAVVF 1003
Query: 1803 AAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEY--DIVFKTQKA 1857
K R YL + + +KYIF + + + RW L+++Y DI + KA
Sbjct: 1004 FLKIWRSYLYGAKVQIYTDHKSLKYIFTQPELNLRQRRWMELVADYNLDIAYHPGKA 1060
Score = 98.6 bits (244), Expect = 4e-20
Identities = 104/481 (21%), Positives = 200/481 (40%), Gaps = 43/481 (8%)
Query: 2013 VELHHIPRDENQMADALATLSSMFRVNHWNDVPLIKVQRLERPSHVFAIGDVIDQAGENV 2072
+++ + P NQ+ADAL+ S + V L+ + HV A+ ++ G
Sbjct: 1051 LDIAYHPGKANQVADALSRRRSEVEAER-SQVDLVNMMGT---LHVNALSKEVEPLGLGA 1106
Query: 2073 VDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDE 2132
D I+ R+ Q+ KT + ++ +G I+ CV
Sbjct: 1107 ADQADLLSRIR-LAQERDEEIKGWAQNNKTEYQTSN----NGTIVVNGRV------CVPN 1155
Query: 2133 HEA--EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADK 2190
A E+++ + H F H + M R L R Y+W+ M+ D ++ KC CQ+ +
Sbjct: 1156 DRALKEEILREAHQSKFSIHPGSNKMYRDLKRY-YHWVGMKKDVARWVAKCPTCQLVKAE 1214
Query: 2191 IHVPPHALNVMSSP-WPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVT 2249
VP L + P W + +D + + + H + V +D TK + ++
Sbjct: 1215 HQVPSGLLQNLPIPEWKWDHITMDFVTGLPTGIKSKHNAVWVVVDRLTKSAHFMAISDKD 1274
Query: 2250 -KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGA 2308
+++A+ + I+ +G+P I++D T + +A + + S+ Y PQ +
Sbjct: 1275 GAEIIAEKYIDEIVRLHGIPVSIVSDRDTRFTSKFWKAFQKALGTRVNLSTAYHPQTDEQ 1334
Query: 2309 VEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLE 2367
E + ++ +++ V + +W + L Y + ++S G +P+ +YG PL
Sbjct: 1335 SERTIQTLEDMLRACVLDWGGNWEKYLRLVEFAYNNSFQASIGMSPYEALYGRACRTPL- 1393
Query: 2368 VEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRPRE 2427
+ E +L +++ ++ K +A R +SY +K+ + E
Sbjct: 1394 ----CWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYA-------NKRRKELE 1442
Query: 2428 FKVGELVLKRRISQQP----DPRGKWAPNYEGPYVVKKAFSGGALILTHMDGVELPNPVN 2483
F+VG+LV + ++ + R K +P Y GPY V + A L +LP +N
Sbjct: 1443 FQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKVIERVGAVAYKL------DLPPKLN 1496
Query: 2484 A 2484
A
Sbjct: 1497 A 1497
>At1g37060 Athila retroelment ORF 1, putative
Length = 1734
Score = 266 bits (679), Expect = 1e-70
Identities = 156/497 (31%), Positives = 252/497 (50%), Gaps = 49/497 (9%)
Query: 1413 IIQLLREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQ 1472
+I L +Y +S +D+ G+ P + HRI + E + RR +P++ +K E+
Sbjct: 861 LITELMKYRKAIGYSLDDIKGISPTLCTHRIHLENESYSSIEPQRRLNPNLKEVVKKEIL 920
Query: 1473 KQIDAGFLMTVEYPEWVANIVPVPKKDGKV------------------RMCVDFRDLNKA 1514
K +DAG + + WV+ + VPKK G RMC+++R LN A
Sbjct: 921 KLLDAGVIYPISDSTWVSPVHCVPKKGGMTVVKNSKDELIPTRTITGHRMCIEYRKLNVA 980
Query: 1515 SPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVM 1574
S K++FPLP ID +++ A + F+D +SG+ QI + P D+ KT+F P+GTF YK M
Sbjct: 981 SRKEHFPLPFIDHMLERLANHPYYCFLDSYSGFFQIPIHPNDQGKTTFTCPYGTFAYKRM 1040
Query: 1575 PFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKL 1634
PFGL NA AT+QR MT++F D+ + VEV++DD V + + L ++ +R + L
Sbjct: 1041 PFGLCNAPATFQRCMTSIFSDLIEEMVEVFMDDFSVYGSSFSSCLLNLCRVLKRCEETNL 1100
Query: 1635 RLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISR 1694
LN KC F VR G +LG +S++GIEVD K+ + ++ P+T K +R FLG +
Sbjct: 1101 VLNWEKCHFMVREGIVLGRKISEEGIEVDKAKIDVMMQLQPPKTVKDIRSFLGHAGFYRI 1160
Query: 1695 FISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAV 1754
FI + P+ +LL K ++DEC AF IK+ L+ PI+ P P +
Sbjct: 1161 FIKDFSKLARPLTRLLCKETEFAFDDECLTAFKLIKEALITAPIVQAPNWDFPFEII--- 1217
Query: 1755 FDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNH 1814
D + RY EK A+ +A ++ R YLV
Sbjct: 1218 ---------------------------TMDDAQVRYATTEKELLAVVFAFEKFRSYLVGS 1250
Query: 1815 TTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLAYQPLDD 1874
+ + +++I+ K ++ RW +LL E+D+ +K I+ + ADHL+ ++D
Sbjct: 1251 KVTIYTDHAALRHIYAKKDTKPRLLRWILLLQEFDMEIVDKKGIENGV-ADHLSRMRIED 1309
Query: 1875 YQPIEFDFPDEEIMYLK 1891
I+ P+E++M ++
Sbjct: 1310 EVLIDDSMPEEQLMAIQ 1326
Score = 203 bits (516), Expect = 1e-51
Identities = 143/419 (34%), Positives = 209/419 (49%), Gaps = 43/419 (10%)
Query: 2077 PWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDILYKRNYDMVLLRCVDEHEAE 2136
PWY D +L+S E PP S +KK + + F D LY D + CV E E E
Sbjct: 1334 PWYADHVNYLVSGEEPPNLSSYEKKKFFKDINHFYWDEPYLYTLCKDKIYRTCVSEDEIE 1393
Query: 2137 QLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPP 2195
++ H +G H AT TMS K+L+AG++W +M D ++ KC +
Sbjct: 1394 GILLHCHGFAYGGHFATFKTMS-KILQAGFWWPSMFKDAQEFISKCDSFE---------- 1442
Query: 2196 HALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEA-ASYTNVTKQVVA 2254
F +WGID +G +S G+++ILVAIDY +KWVEA AS+TN +VV
Sbjct: 1443 ----------NFDVWGIDFMGPF--PSSYGNKYILVAIDYVSKWVEAIASHTN-DARVVL 1489
Query: 2255 KFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANK 2314
K K I R+GVP +I+D G + N + L ++ ++H S G VE +N+
Sbjct: 1490 KLFKTIIFPRFGVPRIVISDGGKHFINKGFENLLKKHGVKHKTS--------GQVEISNR 1541
Query: 2315 NIKRIVQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSL 2373
IK I++K V +T KDW L L YRT ++ G TPF+L+YG LP+E+E ++
Sbjct: 1542 EIKAILEKTVGSTRKDWSAKLNDTLWAYRTAFKTPIGTTPFNLLYGKSCHLPVELEYKAM 1601
Query: 2374 RVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRPREFKVGEL 2433
+ + R QLN + + R++A + Y+ R K+ DKK+ R+FKVG+
Sbjct: 1602 WAVKLLNFDIKTAEEKRLIQLNDLNKIRLEAYESSKIYKERTKSFHDKKIVSRDFKVGDQ 1661
Query: 2434 VL--KRRISQQPDPRGKWAPNYEGPYVVKKAFSGGALILTHMDGVELPNPVNADIVKKY 2490
VL R+ P GK + GP+ V GA+ L +G VN +KKY
Sbjct: 1662 VLLFNSRLRLFP---GKLKSRWSGPFSVTAVRPYGAITLAGKNG---DFTVNGQRLKKY 1714
>At4g10580 putative reverse-transcriptase -like protein
Length = 1240
Score = 262 bits (669), Expect = 2e-69
Identities = 150/456 (32%), Positives = 246/456 (53%), Gaps = 13/456 (2%)
Query: 1414 IQLLREYPDIFAWSYEDMPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKSEVQ 1472
I++++E+ D+F + + GL P + I +P P+ + R P ++K +++
Sbjct: 457 IRVVQEFQDVF----QSLQGLPPSQSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLK 512
Query: 1473 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1532
+ GF+ P W A ++ V KKDG R+C+D+R+LN+ + K+ +PLP ID L+D
Sbjct: 513 DLLGKGFIRPSTSP-WGAPVLFVKKKDGSFRLCIDYRELNRVTVKNRYPLPRIDELLDQL 571
Query: 1533 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1592
+ FS +D SGY+QI ++ D KT+F T +G F + VMPFGL NA A + R M ++
Sbjct: 572 RGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAVFMRLMNSV 631
Query: 1593 FHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1652
F + + V +++DD++V S E+ +L ++ E+LR+ KL +KC+F R LG
Sbjct: 632 FQEFLDEFVIIFIDDILVYSKSPEEQEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLG 691
Query: 1653 FIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1712
IVS +G+ VDP+K+ AIR+ P P ++R FLG Y RF+ + P+ KL K
Sbjct: 692 HIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLGWAGYYRRFVKGFASMAQPMTKLTGK 751
Query: 1713 NQPVVWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKK 1772
+ P VW+ EC+E F S+K+ L P+L P G+P ++Y +GCVL Q +
Sbjct: 752 DVPFVWSQECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQHGK---- 807
Query: 1773 EHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKA 1832
I Y S++ E Y + A+ +A K R YL + + +KYIF +
Sbjct: 808 --VIAYASRQLMKHEGNYPTHDLEMAAVIFALKIWRSYLYGGKVQVFTDHKSLKYIFTQP 865
Query: 1833 AVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1868
+ + RW L+++YD+ K +++ D L+
Sbjct: 866 ELNLRQRRWMELVADYDLEIAYHPG-KANVVVDALS 900
Score = 32.7 bits (73), Expect = 2.7
Identities = 28/113 (24%), Positives = 50/113 (43%), Gaps = 10/113 (8%)
Query: 2161 LRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSP-WPFSMWGIDMIGRIE 2219
L+ Y W+ M+ D + +C CQ+ + V L + P W + +D++ +
Sbjct: 965 LKRYYQWVGMKMDVANWVAECDVCQLVKAEHQVLGGMLQSLPIPEWKWDFITMDLV--VG 1022
Query: 2220 PKASNGHRFILVAIDYFTKWVEAASYTNVTK----QVVAKFIKNNIICRYGVP 2268
+ S I V +D TK +A + + K V+AK + I+ +GVP
Sbjct: 1023 LRVSRTKDAIWVIVDRLTK---SAHFLAIRKTDGAAVLAKKFVSEIVKLHGVP 1072
>At2g04670 putative retroelement pol polyprotein
Length = 1411
Score = 258 bits (658), Expect = 4e-68
Identities = 149/456 (32%), Positives = 244/456 (52%), Gaps = 13/456 (2%)
Query: 1414 IQLLREYPDIFAWSYEDMPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKSEVQ 1472
I++++E+ D+F + + GL P + I +P P+ + R P ++K +++
Sbjct: 483 IRVIQEFEDVF----QSLQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMTELKKQLE 538
Query: 1473 KQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNT 1532
+ GF+ P W A ++ V KKDG R+C+D+R LN + K+ +PLP ID L+D
Sbjct: 539 DLLGKGFIRPSTSP-WGAPVLFVKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQL 597
Query: 1533 AQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTL 1592
+ FS +D SGY+QI ++ D KT+F T +G F + VMPF L NA A + R M ++
Sbjct: 598 RGATCFSKIDLTSGYHQIPIAEADVRKTAFRTRYGHFEFVVMPFALTNAPAAFMRLMNSV 657
Query: 1593 FHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLG 1652
F + + V +++DD++V S E+H +L ++ E+LR+ KL +KC+F R LG
Sbjct: 658 FQEFLDEFVIIFIDDILVYSKSPEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREIGFLG 717
Query: 1653 FIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRK 1712
IVS +G+ VDP+K+ AIR+ P P ++R FL Y RF+ + P+ KL K
Sbjct: 718 HIVSAEGVSVDPEKIEAIRDWPRPTNATEIRSFLRLTGYYRRFVKGFASMAQPMTKLTGK 777
Query: 1713 NQPVVWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKK 1772
+ P VW+ EC+E F S+K+ L P+L P G+P ++Y +GCVL Q+ +
Sbjct: 778 DVPFVWSPECEEGFVSLKEMLTSTPVLALPEHGQPYMVYTDASRVGLGCVLMQRGK---- 833
Query: 1773 EHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKA 1832
I Y S++ E Y + + +A K R YL + + +KYIF +
Sbjct: 834 --VIAYASRQLRKHEGNYPTHDLEMAVVIFALKIWRSYLYGGKVQVFTDHKSLKYIFNQP 891
Query: 1833 AVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1868
+ + RW L+++YD+ K +++AD L+
Sbjct: 892 ELNLRQMRWMELVADYDLEIAYHPG-KANVVADALS 926
Score = 79.7 bits (195), Expect = 2e-14
Identities = 77/336 (22%), Positives = 137/336 (39%), Gaps = 57/336 (16%)
Query: 2131 DEHEAEQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADK 2190
DE +++ + H F H M R L R Y W+ M+ D + +C CQ+ +
Sbjct: 1012 DEELRREILSEAHASMFSIHPGATKMYRDLKRY-YQWVGMKRDVANWVAECDVCQLVKAE 1070
Query: 2191 IHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASYTNVTK 2250
VP ++W V +D TK +A + + K
Sbjct: 1071 HQVPD------------AIW--------------------VIMDRLTK---SAHFLAIRK 1095
Query: 2251 Q----VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMN 2306
V+AK + I+ +GVP I++D + +A + + S+ Y PQ +
Sbjct: 1096 TDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTFAFWRAFQAKMGTKVQMSTAYHPQTD 1155
Query: 2307 GAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLP 2365
G E + ++ +++ V + W + L Y + ++S G PF +YG P
Sbjct: 1156 GQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYQASIGMAPFEALYGRPCWTP 1215
Query: 2366 LEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRP 2425
L + E + A++ Q +++ +++ +A AR +SY DK+ R
Sbjct: 1216 LR-----WTQVEERSIYGADYVQETTERIRVLKLNMKEAQARQRSYA-------DKRRRE 1263
Query: 2426 REFKVGELV-LKRRISQQPDP---RGKWAPNYEGPY 2457
EF+VG+ V LK + + P+ K +P Y GP+
Sbjct: 1264 LEFEVGDRVYLKMAMLRGPNRSILETKLSPRYMGPF 1299
>At2g07660 putative retroelement pol polyprotein
Length = 949
Score = 251 bits (642), Expect = 3e-66
Identities = 150/430 (34%), Positives = 232/430 (53%), Gaps = 22/430 (5%)
Query: 1384 EIELVNIGTEENKREIKIGATLEEGVKRKIIQLLREYPDIFAWSYEDMPGL-DPMIVEHR 1442
E L I T+E +GA+ E K I ++ E+ D+FA P DP +E
Sbjct: 100 EAYLATITTKE------VGASAE----LKDILIVNEFSDVFAAVSGVPPDRSDPFTIE-- 147
Query: 1443 IPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKV 1502
+P P+ + R P ++K ++++ + GF+ P W A ++ V KKDG
Sbjct: 148 --LEPGTTPISKAPYRMAPAEMAELKKQLEELLAKGFIRPSSSP-WGAPVLFVKKKDGSF 204
Query: 1503 RMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSF 1562
R+C+D+R LNK + K+ +PLP ID L+D ++ FS +D SGY+QI + P D KT+F
Sbjct: 205 RLCIDYRGLNKVTVKNKYPLPRIDELMDQLGGAQWFSKIDLASGYHQIPIEPTDVRKTAF 264
Query: 1563 ITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYL 1622
T +G F + VMPFGL NA A + + M +F D + V +++DD++V S E H E+L
Sbjct: 265 RTRYGHFEFVVMPFGLTNAPAAFMKMMNGVFRDFLDEFVIIFIDDILVHSKSWEAHQEHL 324
Query: 1623 TKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQV 1682
+ ERLR+++L +K +F RS LG ++S +G+ VDP+K+R+I+E P PR ++
Sbjct: 325 RAVLERLREHELFAKLSKFSFWQRSVGFLGHVISDQGVSVDPEKIRSIKEWPRPRNATEI 384
Query: 1683 RGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPP 1742
R FLG Y RF+ + P+ +L K+ W+DEC+++F +K L+ P+LV P
Sbjct: 385 RSFLGLAGYYRRFVMSFASMAQPLTRLTGKDTAFNWSDECEKSFLELKAMLINAPVLVLP 444
Query: 1743 VEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAW 1802
EG P +Y +GCVL Q K I Y S++ E Y + A+ +
Sbjct: 445 EEGEPYTVYTDASIVGLGCVLMQ------KGSVIAYASRQLRKHEKNYPTHDLEMAAVVF 498
Query: 1803 AAKRLRHYLV 1812
A K R YL+
Sbjct: 499 ALKIWRSYLI 508
Score = 102 bits (254), Expect = 3e-21
Identities = 79/340 (23%), Positives = 150/340 (43%), Gaps = 22/340 (6%)
Query: 2129 CVDEHEA--EQLMHDVHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQI 2186
CV A E+++ + H F H + M R L R Y+W+ M D ++ KC CQ+
Sbjct: 544 CVPNDRALKEEILREAHQSKFSIHPGSNKMYRDLKRY-YHWVGMRKDVARWVAKCPTCQL 602
Query: 2187 YADKIHVPPHAL-NVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYFTKWVEAASY 2245
+ VP L N+ S W + +D + R+ + H + V +D TK +
Sbjct: 603 VKAEHQVPSGLLQNLPISEWKWDHITMDFVTRLPTGIKSKHNAVWVVVDRLTKSAHFMAI 662
Query: 2246 TNVT-KQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQ 2304
++ +++A+ + I+ +G+P I++D T + A + + S+ Y PQ
Sbjct: 663 SDKDGAEIIAEKYIDEIMRLHGIPVSIVSDRDTRFTSKFWNAFQKALGTRVNLSTAYHPQ 722
Query: 2305 MNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAV 2363
+G E + ++ +++ V + +W + L Y + ++S G +P+ +YG
Sbjct: 723 TDGQSERTIQTLEDMLRACVLDWGGNWEKYLRLIEFAYNNSFQASIGMSPYEALYGRACR 782
Query: 2364 LPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKV 2423
PL + E +L +++ ++ K +A R +SY +K+
Sbjct: 783 TPL-----CWTPVGERRLFGPTIVDETTERMKFLKIKLKEAQDRQKSYA-------NKRR 830
Query: 2424 RPREFKVGELVLKRRISQQP----DPRGKWAPNYEGPYVV 2459
+ EF+VG+LV + ++ + R K +P Y GPY V
Sbjct: 831 KELEFQVGDLVYLKAMTYKGAGRFTSRKKLSPRYVGPYKV 870
>At3g11970 hypothetical protein
Length = 1499
Score = 249 bits (635), Expect = 2e-65
Identities = 155/467 (33%), Positives = 249/467 (53%), Gaps = 15/467 (3%)
Query: 1404 TLEEGVKRKIIQLLREYPDIFAWSYEDMPGLDPMIVEH--RIPTKPECPPVRQKLRRTHP 1461
T E G + + ++L EYPDIF + L P +H +I PV Q+ R
Sbjct: 556 TSELGEESVVEEVLNEYPDIFI----EPTALPPFREKHNHKIKLLEGSNPVNQRPYRYSI 611
Query: 1462 DMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFP 1521
+I V+ + G + P + + +V V KKDG R+CVD+R+LN + KD+FP
Sbjct: 612 HQKNEIDKLVEDLLTNGTVQASSSP-YASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFP 670
Query: 1522 LPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINA 1581
+P I+ L+D + +FS +D +GY+Q++M P+D +KT+F T G F Y VMPFGL NA
Sbjct: 671 IPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNA 730
Query: 1582 GATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKC 1641
AT+Q M +F K V V+ DD++V S+ E+H ++L ++FE +R KL +KC
Sbjct: 731 PATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKC 790
Query: 1642 TFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFISHMTA 1701
F V + LG +S +GIE DP K++A++E P P T KQ+RGFLG Y RF+
Sbjct: 791 AFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGV 850
Query: 1702 TCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDESMGC 1761
GP+ L K W Q+AF+ +K L + P+L P+ + ++ + +G
Sbjct: 851 IAGPL-HALTKTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGA 909
Query: 1762 VLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISR 1821
VL Q+ H + Y+S++ + ++ EK A+ +A ++ RHYL+ + +
Sbjct: 910 VLMQEG------HPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTD 963
Query: 1822 MDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1868
+KY+ E+ T +W L E+D + ++ K +++AD L+
Sbjct: 964 QRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQG-KENVVADALS 1009
Score = 83.6 bits (205), Expect = 1e-15
Identities = 86/327 (26%), Positives = 138/327 (41%), Gaps = 25/327 (7%)
Query: 2142 VHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVM 2201
+H G H+ G ++ + ++ +YW M D Y R C CQ P L +
Sbjct: 1088 LHGSGVGGHS-GRDVTHQRVKGLFYWKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL 1146
Query: 2202 SSPWPFSMWGIDMIGRIEP-KASNGHRFILVAIDYFTKWVEAASYTN-VTKQVVAKFIKN 2259
P P ++W + IE S G I+V +D +K + ++ + VA +
Sbjct: 1147 --PIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAHAYLD 1204
Query: 2260 NIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRI 2319
N+ +G P+ I++D + + + +S Y PQ +G E N+ ++
Sbjct: 1205 NVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETY 1264
Query: 2320 VQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIME 2378
++ M W + L A + Y T SS+ TPF +VYG V P V +P L E
Sbjct: 1265 LRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQ--VPP--VHLPYLP--GE 1318
Query: 2379 AKLS-EAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRPREFKVGELVL-- 2435
+K++ A Q R D L ++ M A Q RMK D+ REF++G+ V
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRA-------QHRMKQFADQHRTEREFEIGDYVYVK 1371
Query: 2436 ---KRRISQQPDPRGKWAPNYEGPYVV 2459
R+ S K +P Y GPY +
Sbjct: 1372 LQPYRQQSVVMRANQKLSPKYFGPYKI 1398
>At1g36590 hypothetical protein
Length = 1499
Score = 249 bits (635), Expect = 2e-65
Identities = 155/467 (33%), Positives = 249/467 (53%), Gaps = 15/467 (3%)
Query: 1404 TLEEGVKRKIIQLLREYPDIFAWSYEDMPGLDPMIVEH--RIPTKPECPPVRQKLRRTHP 1461
T E G + + ++L EYPDIF + L P +H +I PV Q+ R
Sbjct: 556 TSELGEESVVEEVLNEYPDIFI----EPTALPPFREKHNHKIKLLEGSNPVNQRPYRYSI 611
Query: 1462 DMALKIKSEVQKQIDAGFLMTVEYPEWVANIVPVPKKDGKVRMCVDFRDLNKASPKDNFP 1521
+I V+ + G + P + + +V V KKDG R+CVD+R+LN + KD+FP
Sbjct: 612 HQKNEIDKLVEDLLTNGTVQASSSP-YASPVVLVKKKDGTWRLCVDYRELNGMTVKDSFP 670
Query: 1522 LPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGLINA 1581
+P I+ L+D + +FS +D +GY+Q++M P+D +KT+F T G F Y VMPFGL NA
Sbjct: 671 IPLIEDLMDELGGAVIFSKIDLRAGYHQVRMDPDDIQKTAFKTHSGHFEYLVMPFGLTNA 730
Query: 1582 GATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNPNKC 1641
AT+Q M +F K V V+ DD++V S+ E+H ++L ++FE +R KL +KC
Sbjct: 731 PATFQGLMNFIFKPFLRKFVLVFFDDILVYSSSLEEHRQHLKQVFEVMRANKLFAKLSKC 790
Query: 1642 TFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFISHMTA 1701
F V + LG +S +GIE DP K++A++E P P T KQ+RGFLG Y RF+
Sbjct: 791 AFAVPKVEYLGHFISAQGIETDPAKIKAVKEWPQPTTLKQLRGFLGLAGYYRRFVRSFGV 850
Query: 1702 TCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDESMGC 1761
GP+ L K W Q+AF+ +K L + P+L P+ + ++ + +G
Sbjct: 851 IAGPL-HALTKTDAFEWTAVAQQAFEDLKAALCQAPVLSLPLFDKQFVVETDACGQGIGA 909
Query: 1762 VLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWLISR 1821
VL Q+ H + Y+S++ + ++ EK A+ +A ++ RHYL+ + +
Sbjct: 910 VLMQEG------HPLAYISRQLKGKQLHLSIYEKELLAVIFAVRKWRHYLLQSHFIIKTD 963
Query: 1822 MDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1868
+KY+ E+ T +W L E+D + ++ K +++AD L+
Sbjct: 964 QRSLKYLLEQRLNTPIQQQWLPKLLEFDYEIQYRQG-KENVVADALS 1009
Score = 79.0 bits (193), Expect = 3e-14
Identities = 85/327 (25%), Positives = 138/327 (41%), Gaps = 25/327 (7%)
Query: 2142 VHDGTFGTHATGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVM 2201
+H G H+ G ++ + ++ +Y M D Y R C CQ P L +
Sbjct: 1088 LHGSGVGGHS-GRDVTHQRVKGLFYSKGMIKDIQAYIRSCGTCQQCKSDPAASPGLLQPL 1146
Query: 2202 SSPWPFSMWGIDMIGRIEP-KASNGHRFILVAIDYFTKWVEAASYTN-VTKQVVAKFIKN 2259
P P ++W + IE S G I+V +D +K + ++ + VA+ +
Sbjct: 1147 --PIPDTIWSEVSMDFIEGLPVSGGKTVIMVVVDRLSKAAHFIALSHPYSALTVAQAYLD 1204
Query: 2260 NIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRI 2319
N+ +G P+ I++D + + + +S Y PQ +G E N+ ++
Sbjct: 1205 NVFKLHGCPTSIVSDRDVVFTSEFWREFFTLQGVALKLTSAYHPQSDGQTEVVNRCLETY 1264
Query: 2320 VQKMVTTYKD-WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIME 2378
++ M W + L A + Y T SS+ TPF +VYG V P V +P L E
Sbjct: 1265 LRCMCHDRPQLWSKWLALAEYWYNTNYHSSSRMTPFEIVYGQ--VPP--VHLPYLP--GE 1318
Query: 2379 AKLS-EAEWCQSRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRPREFKVGELVL-- 2435
+K++ A Q R D L ++ M A Q RMK D+ REF++G+ V
Sbjct: 1319 SKVAVVARSLQEREDMLLFLKFHLMRA-------QHRMKQFADQHRTEREFEIGDYVYVK 1371
Query: 2436 ---KRRISQQPDPRGKWAPNYEGPYVV 2459
R+ S K +P Y GPY +
Sbjct: 1372 LQPYRQQSVVMRANQKLSPKYFGPYKI 1398
>At2g14650 putative retroelement pol polyprotein
Length = 1328
Score = 248 bits (633), Expect = 3e-65
Identities = 154/501 (30%), Positives = 252/501 (49%), Gaps = 25/501 (4%)
Query: 1371 LEQEKKAIQPHQEEIELVNIGTEENKREIKIGATLEEGVKRKIIQLLREYPDIFAWSYED 1430
L+ + + + E LV G + I A E + K + E+ D+F +
Sbjct: 401 LDCHRGRVSFERPEGSLVYQGVRPTSGSLVISAVQAEKMIEKGCEAYLEFEDVF----QS 456
Query: 1431 MPGLDPMIVE-HRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWV 1489
+ GL P + I +P P+ + R P ++K +++ + A L
Sbjct: 457 LQGLPPSRSDPFTIELEPGTAPLSKAPYRMAPAEMAELKKQLEDLLGAPVLF-------- 508
Query: 1490 ANIVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQ 1549
V KKDG R+C+D+R LN + K+ +PLP ID L+D + FS +D SGY+
Sbjct: 509 -----VKKKDGSFRLCIDYRGLNWVTVKNKYPLPRIDELLDQLRGATCFSKIDLTSGYHL 563
Query: 1550 IKMSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMI 1609
I ++ D KT+F T +G F + VMPFGL NA A + R M ++F ++ + V +++DD++
Sbjct: 564 IPIAEADVRKTAFRTRYGHFEFVVMPFGLTNAPAAFMRLMNSVFQEVLDEFVIIFIDDIL 623
Query: 1610 VKSTDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRA 1669
V S E+H +L ++ E+LR+ KL +KC+F R LG IVS +G+ VDP+K+ A
Sbjct: 624 VYSKSLEEHEVHLRRVMEKLREQKLFAKLSKCSFWQREMGFLGHIVSAEGVSVDPEKIEA 683
Query: 1670 IREMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSI 1729
IR+ P ++R FLG Y RF+ + P+ KL K+ P VW+ EC+E F S+
Sbjct: 684 IRDWHTPTNATEIRSFLGLAGYYRRFVKGFASMAQPMTKLTGKDVPFVWSPECEEGFVSL 743
Query: 1730 KKYLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETR 1789
K+ L P+L P G P ++Y +GCVL Q+ + I Y S++ E
Sbjct: 744 KEMLTSTPVLALPEHGEPYMVYTDASGVGLGCVLMQRGK------VIAYASRQLRKHEGN 797
Query: 1790 YTMLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYD 1849
Y + A+ +A K R YL + + +KYIF + + + +W L+++YD
Sbjct: 798 YPTHDLEMAAVIFALKIWRSYLYGGNVQVFTDHKSLKYIFTQPELNLRQRQWMELVADYD 857
Query: 1850 IVFKTQKAIKGSILADHLAYQ 1870
+ K +++AD L+++
Sbjct: 858 LEIAYHPG-KANVVADALSHK 877
Score = 72.0 bits (175), Expect = 4e-12
Identities = 71/295 (24%), Positives = 125/295 (42%), Gaps = 27/295 (9%)
Query: 2173 DCYQYARKCHKCQIYADKIHVPPHALNVMSSP-WPFSMWGIDMIGRIEPKASNGHRFILV 2231
D + +C CQ+ + VP L + P W + ID + + S I V
Sbjct: 942 DVANWVAECDVCQLVKAEHQVPGGMLQSLPIPEWKWDFITIDFV--VGLPVSRTKDAIWV 999
Query: 2232 AIDYFTKWVEAASYTNVTKQ----VVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQAL 2287
+D TK +A + + K V+AK + I+ +GVP I++D + + +A
Sbjct: 1000 IVDRLTK---SAHFLAIRKTDGAAVLAKKYVSEIVKLHGVPVSIVSDRDSKFTSAFWRAF 1056
Query: 2288 CEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTY-KDWHEMLPYALHGYRTTVR 2346
E + S+ Y PQ G E + ++ +++ V + W + L Y +
Sbjct: 1057 QAEMGTKVQMSTAYHPQTYGQSERTIQTLEDMLRMCVLDWGGHWADHLSLVEFAYNNSYP 1116
Query: 2347 SSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMA 2406
+S G PF +Y PL L + E + A++ Q +++ +++ +A
Sbjct: 1117 ASIGMAPFEALYERPCRTPL-----CLTQVGERSIYGADYVQETTERIRVLKLNMKEAQD 1171
Query: 2407 RGQSYQARMKTAFDKKVRPREFKVGELV-LKRRISQQPD---PRGKWAPNYEGPY 2457
R +SY DK+ R EF+VG+ V LK + + P+ K +P Y GP+
Sbjct: 1172 RQRSYA-------DKRRRELEFEVGDRVYLKMAMLRGPNRSISETKLSPRYMGPF 1219
>At1g35370 hypothetical protein
Length = 1447
Score = 239 bits (609), Expect = 2e-62
Identities = 160/497 (32%), Positives = 260/497 (52%), Gaps = 20/497 (4%)
Query: 1373 QEKKAIQPHQEEIELVNIGTEENKREIKIGATLEEGVKRKIIQ-LLREYPDIFAWSYEDM 1431
Q+ +A Q + + + ++E + I A + V+ ++Q ++ E+PD+FA +
Sbjct: 503 QKTQADQIQLAMVCVREVVSDEEQEIGSISALTSDVVEESVVQNIVEEFPDVFAEPTDLP 562
Query: 1432 PGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQIDAGFLMTVEYPEWVAN 1491
P + +H+I PV Q+ R +I VQ I +G + P + +
Sbjct: 563 PFREKH--DHKIKLLEGANPVNQRPYRYVVHQKDEIDKIVQDMIKSGTIQVSSSP-FASP 619
Query: 1492 IVPVPKKDGKVRMCVDFRDLNKASPKDNFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIK 1551
+V V KKDG R+CVD+ +LN + KD F +P I+ L+D S VFS +D +GY+Q++
Sbjct: 620 VVLVKKKDGTWRLCVDYTELNGMTVKDRFLIPLIEDLMDELGGSVVFSKIDLRAGYHQVR 679
Query: 1552 MSPEDREKTSFITPWGTFCYKVMPFGLINAGATYQRGMTTLFHDMTHKEVEVYVDDMIVK 1611
M P+D +KT+F T G F Y VM FGL NA AT+Q M ++F D K V V+ DD+++
Sbjct: 680 MDPDDIQKTAFKTHNGHFEYLVMLFGLTNAPATFQSLMNSVFRDFLRKFVLVFFDDILIY 739
Query: 1612 STDEEQHVEYLTKMFERLRKYKLRLNPNKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIR 1671
S+ E+H E+L +FE +R +KL F S + LG +S + IE DP K++A++
Sbjct: 740 SSSIEEHKEHLRLVFEVMRLHKL--------FAKGSKEHLGHFISAREIETDPAKIQAVK 791
Query: 1672 EMPAPRTEKQVRGFLGRLNYISRFISHMTATCGPIFKLLRKNQPVVWNDECQEAFDSIKK 1731
E P P T KQVRGFLG Y RF+ + GP+ L K W+ E Q AFD++K
Sbjct: 792 EWPTPTTVKQVRGFLGFAGYYRRFVRNFGVIAGPL-HALTKTDGFCWSLEAQSAFDTLKA 850
Query: 1732 YLLEPPILVPPVEGRPLIMYLAVFDESMGCVLGQQDETGKKEHAIYYLSKKFTDCETRYT 1791
L P+L PV + ++ E+ C G + +K H + Y+S++ + +
Sbjct: 851 VLCNAPVLALPVFDKQFMV------ETDACGQGIRAVLMQKGHPLAYISRQLKGKQLHLS 904
Query: 1792 MLEKTCCALAWAAKRLRHYLVNHTTWLISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIV 1851
+ EK A +A ++ RHYL+ + + +KY+ E+ T +W L E+D
Sbjct: 905 IYEKELLAFIFAVRKWRHYLLPSHFIIKTDQRSLKYLLEQRLNTPVQQQWLPKLLEFDYE 964
Query: 1852 FKTQKAIKGSILADHLA 1868
+ ++ K +++AD L+
Sbjct: 965 IQYRQG-KENLVADALS 980
Score = 86.3 bits (212), Expect = 2e-16
Identities = 87/347 (25%), Positives = 148/347 (42%), Gaps = 26/347 (7%)
Query: 2152 TGHTMSRKLLRAGYYWMAMEHDCYQYARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWG 2211
+G S + +++ +YW M D + R C CQ P L + P P +W
Sbjct: 1068 SGRDASHQRVKSLFYWKGMVKDIQAFIRSCGTCQQCKSDNAAYPGLLQPL--PIPDKIWC 1125
Query: 2212 IDMIGRIEPKASNGHR-FILVAIDYFTKWVEAASYTN-VTKQVVAKFIKNNIICRYGVPS 2269
+ IE ++G + I+V +D +K + + + VA+ +N+ +G P+
Sbjct: 1126 DVSMDFIEGLPNSGGKSVIMVVVDRLSKAAHFVALAHPYSALTVAQAFLDNVYKHHGCPT 1185
Query: 2270 KIITDNGTNLNNNVVQALCEEFKIEHHNSSPYRPQMNGAVEAANKNIKRIVQKMVTTYKD 2329
I++D ++ + + +E SS Y PQ +G E N+ ++ ++ M
Sbjct: 1186 SIVSDRDVLFTSDFWKEFFKLQGVELRMSSAYHPQSDGQTEVVNRCLENYLRCMCHARPH 1245
Query: 2330 -WHEMLPYALHGYRTTVRSSTGATPFSLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQ 2388
W++ LP A + Y T SS+ TPF LVYG + L +V + A+ Q
Sbjct: 1246 LWNKWLPLAEYWYNTNYHSSSQMTPFELVYGQAPPIHLPYLPGKSKVAVVARS-----LQ 1300
Query: 2389 SRYDQLNLIEEKRMDAMARGQSYQARMKTAFDKKVRPREFKVGELVL-----KRRISQQP 2443
R + L ++ M A Q RMK D+ R F +G+ V R+ S
Sbjct: 1301 ERENMLLFLKFHLMRA-------QHRMKQFADQHRTERTFDIGDFVYVKLQPYRQQSVVL 1353
Query: 2444 DPRGKWAPNYEGPY-VVKKAFSGGALILTHMDGVELPNPVNADIVKK 2489
K +P Y GPY +++K G ++ +LP+ V DI +K
Sbjct: 1354 RVNQKLSPKYFGPYKIIEKC--GEVMVGNVTTSTQLPS-VLPDIFEK 1397
>At2g14040 putative retroelement pol polyprotein
Length = 841
Score = 232 bits (592), Expect = 2e-60
Identities = 147/470 (31%), Positives = 230/470 (48%), Gaps = 77/470 (16%)
Query: 1417 LREYPDIFAWSYEDMPGLDPMIVEHRIPTKPECPPVRQKLRRTHPDMALKIKSEVQKQID 1476
LR+Y +S +D+ G+ P + H I + E + RR + ++ +K E+ K +D
Sbjct: 340 LRKYRKALGYSLDDITGISPTLCMHMIHLEGESITSVEHQRRLNSNLRDVVKKEIMKLLD 399
Query: 1477 AGFLMTVEYPEWVANIVPVPKKDGKV------------------RMCVDFRDLNKASPKD 1518
AG + + WV+ + VPKK G + RMC+D+R LN A+ KD
Sbjct: 400 AGIIYPISDSTWVSPVHVVPKKGGVIVIKNEKNELIPTRTVTGHRMCIDYRKLNSATRKD 459
Query: 1519 NFPLPHIDVLVDNTAQSKVFSFMDGFSGYNQIKMSPEDREKTSFITPWGTFCYKVMPFGL 1578
NFPL ID +++ + + F+DG+ G+ QI + P+D+EKT+F P+GTF Y+ MPFGL
Sbjct: 460 NFPLSFIDQMLERLSNQPYYCFLDGYLGFFQILIHPDDQEKTTFTCPYGTFAYRRMPFGL 519
Query: 1579 INAGATYQRGMTTLFHDMTHKEVEVYVDDMIVKSTDEEQHVEYLTKMFERLRKYKLRLNP 1638
NA AT+Q M +F DM +EV++DD +V E++H L LN
Sbjct: 520 CNAPATFQHCMKYIFSDMIEDFMEVFIDDFLVLQRCEDKH---------------LVLNW 564
Query: 1639 NKCTFGVRSGKLLGFIVSQKGIEVDPDKVRAIREMPAPRTEKQVRGFLGRLNYISRFISH 1698
K F VR G +LG +S+KG+EVD K+ +R FLG + RFI
Sbjct: 565 EKSHFMVRDGIVLGHKISEKGVEVDRAKIEIMR-------------FLGHAGFYRRFIKD 611
Query: 1699 MTATCGPIFKLLRKNQPVVWNDECQEAFDSIKKYLLEPPILVPPVEGRPLIMYLAVFDES 1758
+ P +LL K Q ++D C +AF+ +K+ L+ I+ PP P + D
Sbjct: 612 FSKIARPCTQLLCKEQKSEFDDTCLQAFNIVKESLVSALIVQPPEWELPFEVICDASDYV 671
Query: 1759 MGCVLGQQDETGKKEHAIYYLSKKFTDCETRYTMLEKTCCALAWAAKRLRHYLVNHTTWL 1818
+G VLGQ+ + KK HAIYY S+ + ++ HT
Sbjct: 672 VGAVLGQRKD--KKLHAIYYASRTLDGAQ-----------------------VIVHTVHA 706
Query: 1819 ISRMDPIKYIFEKAAVTGKIARWQMLLSEYDIVFKTQKAIKGSILADHLA 1868
++Y+ K ++ RW +LL ++D+ K +K I+ + AD+L+
Sbjct: 707 -----ALRYLLSKKDAKPRLLRWILLLQDFDLEIKDKKGIENEV-ADNLS 750
>At2g06320 putative retroelement pol polyprotein
Length = 466
Score = 204 bits (520), Expect = 4e-52
Identities = 144/440 (32%), Positives = 218/440 (48%), Gaps = 16/440 (3%)
Query: 2058 VFAIGDVIDQAGENVVDYKPWYYDIKQFLLSREYPPGASKQDKKTLRRLASRFLLDGDIL 2117
+F+IG Q V PWY D +L PP + ++K R + D L
Sbjct: 20 LFSIGKEFHQLNA-VEGGSPWYADHVNYLACGIEPPNLTSYERKNFFRDIHHYYWDEPYL 78
Query: 2118 YKRNYDMVLLRCVDEHEAEQLMHDVHDGTFGTH-ATGHTMSRKLLRAGYYWMAMEHDCYQ 2176
Y D + V E E E ++ HD +G H AT T+S K+L+AG++W M D +
Sbjct: 79 YTLCKDKIYRSYVSEDEVEGILLHCHDSAYGGHFATFKTVS-KILQAGFWWPTMFKDAQE 137
Query: 2177 YARKCHKCQIYADKIHVPPHALNVMSSPWPFSMWGIDMIGRIEPKASNGHRFILVAIDYF 2236
+ KC CQ + N + F +WGID +G +S G+++ILV +DY
Sbjct: 138 FVSKCDSCQRKGNISRRNEMPQNPILEVDIFDVWGIDFMGPFP--SSYGNKYILVVVDYV 195
Query: 2237 TKWVEA-ASYTNVTKQVVAKFIKNNIICRYGVPSKIITDNGTNLNNNVVQALCEEFKIEH 2295
+KWVEA AS TN K VV K K I R+GV +I+D G + N V + L ++ ++H
Sbjct: 196 SKWVEAIASPTNDAK-VVLKLFKTIIFPRFGVSWVVISDGGKHFINKVFENLLKKHGVKH 254
Query: 2296 HNSSPYRPQMNGAVEAANKNIKRIVQKMV-TTYKDWHEMLPYALHGYRTTVRSSTGATPF 2354
++PY PQ +G VE +N+ IK I++K V T KDW L AL Y+T ++ G TPF
Sbjct: 255 KVATPYHPQTSGQVEISNREIKTILEKTVGITRKDWSTKLDDALWAYKTAFKTPIGTTPF 314
Query: 2355 SLVYGMEAVLPLEVEIPSLRVIMEAKLSEAEWCQSRYDQLNLIEEKRMDAMARGQSYQAR 2414
+L+ L +E+E ++ + + R QL+ ++E R++A + Y+ R
Sbjct: 315 NLLCVKSCHLHVELEYKAMWAVKLLNFDIKTAEEKRLIQLSELDEIRLEAYESSKIYKER 374
Query: 2415 MKTAFDKKVRPREFKVGELVL--KRRISQQPDPRGKWAPNYEGPYVVKKAFSGGALILTH 2472
K DKK+ ++F+VG+ VL R+ P GK + GP+ + + GA+ L
Sbjct: 375 TKLFHDKKIITKDFQVGDQVLLFNSRLKIFP---GKLKSRWSGPFCITEVRPYGAVTLAG 431
Query: 2473 MDGVELPNPVNADIVKKYFA 2492
GV VN +KKY A
Sbjct: 432 KSGV---FTVNGQRLKKYLA 448
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.319 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 58,154,856
Number of Sequences: 26719
Number of extensions: 2682317
Number of successful extensions: 9406
Number of sequences better than 10.0: 234
Number of HSP's better than 10.0 without gapping: 113
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 8219
Number of HSP's gapped (non-prelim): 763
length of query: 2492
length of database: 11,318,596
effective HSP length: 116
effective length of query: 2376
effective length of database: 8,219,192
effective search space: 19528800192
effective search space used: 19528800192
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 69 (31.2 bits)
Medicago: description of AC146557.10