BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC146527.6 - phase: 0 /pseudo
(1019 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g20460 putative retroelement pol polyprotein 597 e-170
At2g16000 putative retroelement pol polyprotein 589 e-168
At2g16670 putative retroelement pol polyprotein 586 e-167
At1g70010 hypothetical protein 580 e-165
At1g57640 579 e-165
At4g22040 LTR retrotransposon like protein 577 e-165
At1g31210 putative reverse transcriptase 567 e-161
At4g17450 retrotransposon like protein 566 e-161
At3g61330 copia-type polyprotein 531 e-151
At3g60170 putative protein 530 e-150
At1g58140 hypothetical protein 530 e-150
At1g48710 hypothetical protein 530 e-150
At1g26990 polyprotein, putative 513 e-145
At3g25450 hypothetical protein 506 e-143
At2g23330 putative retroelement pol polyprotein 503 e-142
At2g13940 putative retroelement pol polyprotein 498 e-141
At2g15650 putative retroelement pol polyprotein 498 e-141
At4g10990 putative retrotransposon polyprotein 465 e-131
At2g05390 putative retroelement pol polyprotein 465 e-131
At2g24660 putative retroelement pol polyprotein 460 e-129
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 597 bits (1539), Expect = e-170
Identities = 318/745 (42%), Positives = 461/745 (61%), Gaps = 22/745 (2%)
Query: 284 SFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAV 343
+F EF ++ GI+S SCP TP QN V ERK++H+L+V R L+ +S++ +W + + TAV
Sbjct: 700 AFTEFYKAKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSNMSLPYWGDCVLTAV 759
Query: 344 HLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLG 403
LINR PS + N++PF L G P+YS L+ FGC+CY ++R KF +S C FLG
Sbjct: 760 FLINRTPSALLSNKTPFEVLTGKLPDYSQLKTFGCLCYSSTSSKQRHKFLPRSRACVFLG 819
Query: 404 YSPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISIL----PLFYDSHSR 459
Y KG+ D + +SRNV F E + AS ++ + PL +
Sbjct: 820 YPFGFKGYKLLDLESNVVHISRNVEFHEELFPLASSQQSATTASDVFTPMDPLSSGNSIT 879
Query: 460 QQPSKPLLT-----YKRRSTATHGPPQDNSLVAGPVEEPAPLRRS---SRESKPPERYIN 511
P ++ KRR T QD ++ P+ S S+ S YIN
Sbjct: 880 SHLPSPQISPSTQISKRRITKFPAHLQDYHCYFVNKDDSHPISSSLSYSQISPSHMLYIN 939
Query: 512 CMTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFS 571
+S IPIP SY +A ++ W AI+ E+ A+E TW+I P K +G K+VF+
Sbjct: 940 ----NISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEITSLPPGKKAVGCKWVFT 995
Query: 572 IKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMD 631
+K +DGS++R+KA +V G Q+ GLDY ETF+PVAKM TV+ +L ++AS+ W L+Q+D
Sbjct: 996 VKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVKLLLKVSASKKWYLNQLD 1055
Query: 632 VKNAFLHGDLQEEVYIKLPNGMP-----TPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTL 686
+ NAFL+GDL+E +Y+KLP+G + PN VC+LK+S+YGLKQA R WF KF ++L
Sbjct: 1056 ISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIYGLKQASRQWFLKFSNSL 1115
Query: 687 LGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELG 746
L F + D +LF++ +VLLVYVDDIV+ + + A + L ++F ++ELG
Sbjct: 1116 LALGFEKQHGDHTLFVRCIGSEFIVLLVYVDDIVIASTTEQAAQSLTEALKASFKLRELG 1175
Query: 747 RLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDD 806
L YFLGLEV EG+ L+Q+KY +L+ A + + PM N++ +++G L+D
Sbjct: 1176 PLKYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSIPMTPNIRLSKNDGLLLED 1235
Query: 807 PTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFF 866
YR+LVG L+Y+TITRPDI+FAV+ + +F APR HL+AV ++++Y+ GT+ +GLF+
Sbjct: 1236 KEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAAVYKVLQYIKGTVGQGLFY 1295
Query: 867 PVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAM 926
+ L+ Y+DADW CPD+R+STTG+ MF+G++ ISW+ KKQ +VS+SS EAEYRA+
Sbjct: 1296 SAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRSKKQPTVSRSSAEAEYRAL 1355
Query: 927 SAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREA 986
+ A E+ WL LL L P L++D+T+A+ IA NPV+HERTKHIE+DCH++RE
Sbjct: 1356 ALASCEMAWLSTLLLALRVHSGVPI-LYSDSTAAVYIATNPVFHERTKHIEIDCHTVREK 1414
Query: 987 YDRRIINLPHVSTSVQTADIFTKSL 1011
D + L HV T Q ADI TK L
Sbjct: 1415 LDNGQLKLLHVKTKDQVADILTKPL 1439
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 589 bits (1519), Expect = e-168
Identities = 319/761 (41%), Positives = 462/761 (59%), Gaps = 52/761 (6%)
Query: 285 FQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVH 344
F F GI+S SCP TP QN V ERK++H+L+V R L+ +S VP W + + TAV
Sbjct: 690 FTSFYAEKGIVSFHSCPETPEQNSVVERKHQHILNVARALMFQSQVPLSLWGDCVLTAVF 749
Query: 345 LINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGY 404
LINR PS + N++P+ L G P Y LR FGC+CY P++R KF +S C FLGY
Sbjct: 750 LINRTPSQLLMNKTPYEILTGTAPVYEQLRTFGCLCYSSTSPKQRHKFQPRSRACLFLGY 809
Query: 405 SPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSHSRQQPSK 464
KG+ D + +SRNV F E + A + SS L LF P
Sbjct: 810 PSGYKGYKLMDLESNTVFISRNVQFHEEVFPLAKNPGSESS----LKLF-------TPMV 858
Query: 465 PLLTYKRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRESKPPERYIN------------- 511
P+ + T TH P S + + + P S R KPP +
Sbjct: 859 PVSSGIISDT-THSP----SSLPSQISDLPPQISSQRVRKPPAHLNDYHCNTMQSDHKYP 913
Query: 512 ---------------CMTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVP 556
C ++ IPIP++Y +A + W +A+++E+ A+E+ TW+I
Sbjct: 914 ISSTISYSKISPSHMCYINNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITT 973
Query: 557 CPSSVKPLGSKFVFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTI 616
P K +G K+VF++K +DG+++RYKA LV G Q+ GLDY +TF+PVAKMTT++ +
Sbjct: 974 LPKGKKAVGCKWVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLL 1033
Query: 617 LAIAASQAWPLHQMDVKNAFLHGDLQEEVYIKLPNG------MPTPSPNTVCKLKRSLYG 670
L ++AS+ W L Q+DV NAFL+G+L+EE+++K+P G + PS N V +LKRS+YG
Sbjct: 1034 LKVSASKKWFLKQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPS-NVVLRLKRSIYG 1092
Query: 671 LKQAPRVWFEKFRSTLLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAIS 730
LKQA R WF+KF S+LL F ++ D +LFL+ V++LVYVDDIV+ + + A +
Sbjct: 1093 LKQASRQWFKKFSSSLLSLGFKKTHGDHTLFLKMYDGEFVIVLVYVDDIVIASTSEAAAA 1152
Query: 731 RIKNLLHSTFHMKELGRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPM 790
++ L F +++LG L YFLGLEV G+ + Q+KY +L+Q G+ V PM
Sbjct: 1153 QLTEELDQRFKLRDLGDLKYFLGLEVARTTAGISICQRKYALELLQSTGMLACKPVSVPM 1212
Query: 791 EVNVKYRRDEGDHLDDPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQ 850
N+K R+D+GD ++D QYR++VG L+Y+TITRPDI+FAV+ + +F APR HL+A
Sbjct: 1213 IPNLKMRKDDGDLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAY 1272
Query: 851 QIIRYLLGTLKRGLFFPVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKK 910
++++Y+ GT+ +GLF+ S + L+ ++D+DWA C D+R+STT + MF+G++ ISW+ KK
Sbjct: 1273 RVLQYIKGTVGQGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKK 1332
Query: 911 QDSVSKSSTEAEYRAMSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYH 970
Q +VS+SS EAEYRA++ A E++WL LL L S P L++D+T+AI IA NPV+H
Sbjct: 1333 QHTVSRSSAEAEYRALALATCEMVWLFTLLVSLQASPPVPI-LYSDSTAAIYIATNPVFH 1391
Query: 971 ERTKHIEVDCHSIREAYDRRIINLPHVSTSVQTADIFTKSL 1011
ERTKHI++DCH++RE D + L HV T Q ADI TK L
Sbjct: 1392 ERTKHIKLDCHTVRERLDNGELKLLHVRTEDQVADILTKPL 1432
>At2g16670 putative retroelement pol polyprotein
Length = 1333
Score = 586 bits (1510), Expect = e-167
Identities = 327/791 (41%), Positives = 447/791 (56%), Gaps = 66/791 (8%)
Query: 287 EFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVHLI 346
+F Q G+I +RSC +TP +N ERK+RHLL+V R L ++++P +FW E + TA +LI
Sbjct: 526 KFFQEQGVIHERSCVATPERNDRVERKHRHLLNVARALRFQANLPIQFWGECVLTAAYLI 585
Query: 347 NRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGYSP 406
NR PS + + +P+ RL+ P + LRVFG +CY H + KF +S C F+GY
Sbjct: 586 NRTPSSVLNDSTPYERLHKKQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPH 645
Query: 407 HQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHD------------------------- 441
QKG+ +D VSR+V+F E ++ F H+
Sbjct: 646 GQKGWRLFDLEQNEFFVSRDVVFSELEFPFRISHEQNVIEEEEEALWAPIVDGLIEEEVH 705
Query: 442 -----------LVSSPISILPLFYDSHSRQQPSKPLLTY-----KRRSTATHGPPQDNSL 485
VSSPIS P S S S PL T +T+ P +L
Sbjct: 706 LGQNAGPTPPICVSSPIS--PSATSSRSEHSTSSPLDTEVVPTPATSTTSASSPSSPTNL 763
Query: 486 --------------VAGPVEEPAPLRRSSRESKPP----ERYINCMTATLSSIPIPSSYK 527
P P P R+S+R PP + +N S + S
Sbjct: 764 QFLPLSRAKPTTAQAVAPPAVPPPRRQSTRNKAPPVTLKDFVVNTTVCQESPSKLNSILY 823
Query: 528 QAMENDCWQKAIESELL-----ALEENQTWDIVPCPSSVKPLGSKFVFSIKLRSDGSIDR 582
Q + D ++ S A EEN TW I P + +GS++V+ +K SDGS++R
Sbjct: 824 QLQKRDDTRRFSASHTTYVAIDAQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVER 883
Query: 583 YKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDVKNAFLHGDLQ 642
YKA LV LGNKQ+ G DY ETFAPVAKM TVR L +A + W +HQMDV NAFLHGDL+
Sbjct: 884 YKARLVALGNKQKEGEDYGETFAPVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLR 943
Query: 643 EEVYIKLPNGMPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGFEFSQSRYDPSLFL 702
EEVY+KLP G PN VC+L+++LYGLKQAPR WFEK + L + F QS D SLF
Sbjct: 944 EEVYMKLPPGFEASHPNKVCRLRKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFT 1003
Query: 703 QRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYFLGLEVHYHHEG 762
+ +L+YVDD+++TG+ Q A + K L S FHMK+LG L YFLG+EV G
Sbjct: 1004 LVKGSVRIKILIYVDDLIITGNSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARSTTG 1063
Query: 763 VFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQYRKLVGSLIYVTI 822
+++ Q+KY D++ GL + P+E N K L DP +YR+LVG LIY+ +
Sbjct: 1064 IYICQRKYALDIISETGLLGVKPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLAV 1123
Query: 823 TRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVGSSIKLQAYSDADW 882
TR D++F+VH +++FMQ PR H +A +++RYL +G+F ++ + D+DW
Sbjct: 1124 TRLDLAFSVHILARFMQEPREDHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSDW 1183
Query: 883 AGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEIIWLRGLLTE 942
AG P +R+S TG+ + G++PISWK KKQD+VSKSS EAEYRAMS SE++WL+ LL
Sbjct: 1184 AGDPMSRRSVTGYFVQFGDSPISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFS 1243
Query: 943 LGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDRRIINLPHVSTSVQ 1002
LG S QP + D+ SAI IA NPV+HERTKHIE+D H +R+ + + +I HV T+ Q
Sbjct: 1244 LGVSHVQPMIMCCDSKSAIYIATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQ 1303
Query: 1003 TADIFTKSLTR 1013
ADIFTK L R
Sbjct: 1304 LADIFTKPLGR 1314
>At1g70010 hypothetical protein
Length = 1315
Score = 580 bits (1494), Expect = e-165
Identities = 307/761 (40%), Positives = 459/761 (59%), Gaps = 37/761 (4%)
Query: 284 SFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAV 343
+F +F S GI+ SCP TP QN V ERK++H+L+V R+L +SH+P +W + + TAV
Sbjct: 538 NFTQFYHSKGIVPYHSCPETPQQNSVVERKHQHILNVARSLFFQSHIPISYWGDCILTAV 597
Query: 344 HLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLG 403
+LINR+P+P + ++ PF L P Y ++VFGC+CY P++R KF+ ++ CAF+G
Sbjct: 598 YLINRLPAPILEDKCPFEVLTKTVPTYDHIKVFGCLCYASTSPKDRHKFSPRAKACAFIG 657
Query: 404 YSPHQKGFLCYDPNLRRIRVSRNVIF-------------QENKYFF------------AS 438
Y KG+ D I VSR+V+F QE + FF +S
Sbjct: 658 YPSGFKGYKLLDLETHSIIVSRHVVFHEELFPFLGSDLSQEEQNFFPDLNPTPPMQRQSS 717
Query: 439 HH---DLVSSPISILPLFYDSHSRQQPSKPLLTYKRRSTATHGPPQDNSLVAGPVEEPAP 495
H SS + ILP +++ +PS K + A +S+V+ E
Sbjct: 718 DHVNPSDSSSSVEILPSANPTNNVPEPSVQTSHRKAKKPAYLQDYYCHSVVSSTPHEIRK 777
Query: 496 LRRSSRESKPPERYINCMTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIV 555
R + P ++ C+ T PS+Y +A + W+ A+ +E LE TW++
Sbjct: 778 FLSYDRINDPYLTFLACLDKTKE----PSNYTEAEKLQVWRDAMGAEFDFLEGTHTWEVC 833
Query: 556 PCPSSVKPLGSKFVFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRT 615
P+ + +G +++F IK SDGS++RYKA LV G Q+ G+DY+ETF+PVAK+ +V+
Sbjct: 834 SLPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNETFSPVAKLNSVKL 893
Query: 616 ILAIAASQAWPLHQMDVKNAFLHGDLQEEVYIKLPNGMPTPS-----PNTVCKLKRSLYG 670
+L +AA L Q+D+ NAFL+GDL EE+Y++LP G + PN VC+LK+SLYG
Sbjct: 894 LLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLPPNAVCRLKKSLYG 953
Query: 671 LKQAPRVWFEKFRSTLLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAIS 730
LKQA R W+ KF STLLG F QS D + FL+ + + +LVY+DDI++ ++ A+
Sbjct: 954 LKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKISDGIFLCVLVYIDDIIIASNNDAAVD 1013
Query: 731 RIKNLLHSTFHMKELGRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPM 790
+K+ + S F +++LG L YFLGLE+ +G+ ++Q+KY DL+ G PM
Sbjct: 1014 ILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLDETGQLGCKPSSIPM 1073
Query: 791 EVNVKYRRDEGDHLDDPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQ 850
+ ++ + D G + YR+L+G L+Y+ ITRPDI+FAV+ +++F APR HL AV
Sbjct: 1074 DPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQFSMAPRKAHLQAVY 1133
Query: 851 QIIRYLLGTLKRGLFFPVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKK 910
+I++Y+ GT+ +GLF+ S ++L+ Y++AD+ C D+R+ST+G+CMFLG++ I WK +K
Sbjct: 1134 KILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYCMFLGDSLICWKSRK 1193
Query: 911 QDSVSKSSTEAEYRAMSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYH 970
QD VSKSS EAEYR++S A E++WL L EL +PT L DN +AI IA N V+H
Sbjct: 1194 QDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCDNEAAIHIANNHVFH 1253
Query: 971 ERTKHIEVDCHSIREAYDRRIINLPHVSTSVQTADIFTKSL 1011
ERTKHIE DCHS+RE + + L H++T +Q AD FTK L
Sbjct: 1254 ERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPL 1294
>At1g57640
Length = 1444
Score = 579 bits (1492), Expect = e-165
Identities = 333/802 (41%), Positives = 464/802 (57%), Gaps = 79/802 (9%)
Query: 286 QEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVHL 345
+E+ GI + SC TP QNG ERK+RH+L++ R L +S++P +FW E + +A +L
Sbjct: 625 REYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 684
Query: 346 INRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGYS 405
INR PS + +SP+ LY P YS LRVFG +CY H + KF A+S C F+GY
Sbjct: 685 INRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGY- 743
Query: 406 PH------------QKGFL----------------------------CYDP--------- 416
PH QK F+ C P
Sbjct: 744 PHGQKGWRLFDLEEQKFFVSRDVIFQETEFPYSKMSCNEEDERVLVDCVGPPFIEEAIGP 803
Query: 417 ------NLRRIRVSRNV----IFQENKYFFASHHDLVSSPISILPLFYDSHSRQQPSKPL 466
N+ V NV I E +S + VS +S L F S + Q PL
Sbjct: 804 RTIIGRNIGEATVGPNVATGPIIPEINQESSSPSEFVS--LSSLDPFLASSTVQTADLPL 861
Query: 467 -------LTYKRRSTATHGPPQDNSLVAGPVE-EPAPLRRSSRESKPPERYINCMTATLS 518
+ +R S T P + + V V E SS P E+Y++C T S
Sbjct: 862 SSTTPAPIQLRRSSRQTQKPMKLKNFVTNTVSVESISPEASSSSLYPIEKYVDCHRFTSS 921
Query: 519 SIPI---------PSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFV 569
P++Y +AM + W++A+ +E+ +L NQT+ IV P + LG+K+V
Sbjct: 922 HKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWV 981
Query: 570 FSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQ 629
+ IK RSDG+I+RYKA LVVLGN Q+ G+DYDETFAPVAKM+TVR L +AA++ W +HQ
Sbjct: 982 YKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQ 1041
Query: 630 MDVKNAFLHGDLQEEVYIKLPNGMPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGF 689
MDV NAFLHGDL+EEVY+KLP G P+ VC+L +SLYGLKQAPR WF K S L +
Sbjct: 1042 MDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQY 1101
Query: 690 EFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLT 749
F+QS D SLF V +LVYVDD++++GS DA+++ K+ L S FHMK+LG L
Sbjct: 1102 GFTQSLSDYSLFSYNNDGIFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLK 1161
Query: 750 YFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQ 809
YFLG+EV + +G +L+Q+KY+ D++ GL A P+E N K L D ++
Sbjct: 1162 YFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSR 1221
Query: 810 YRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVG 869
YR+LVG LIY+ +TRP++S++VHT+++FMQ PR H +A +++RYL +G+
Sbjct: 1222 YRRLVGRLIYLVVTRPELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSST 1281
Query: 870 SSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAA 929
S++++ + D+D+A CP TR+S TG+ + LG+ PISWK KKQ +VS+SS EAEYRAM+
Sbjct: 1282 STLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKKQPTVSRSSAEAEYRAMAFL 1341
Query: 930 CSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDR 989
E++WL+ +L +LG S Q + +D+ SAI ++ NPV HERTKH+EVDCH IR+A
Sbjct: 1342 TQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILD 1401
Query: 990 RIINLPHVSTSVQTADIFTKSL 1011
II V + Q ADI TK+L
Sbjct: 1402 GIIATSFVPSHKQLADILTKAL 1423
>At4g22040 LTR retrotransposon like protein
Length = 1109
Score = 577 bits (1488), Expect = e-165
Identities = 306/726 (42%), Positives = 439/726 (60%), Gaps = 62/726 (8%)
Query: 286 QEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVHL 345
+E+ GI + SC TP QNG ERK+RH+L++ R L +S++P +FW E + +A +L
Sbjct: 425 REYFLHKGIAHETSCVGTPHQNGRVERKHRHILNIARALRFQSYLPIQFWGECILSAAYL 484
Query: 346 INRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGYS 405
INR PS + +SP+ LY P YS LRVFG +CY H + KF A+S C F+GY
Sbjct: 485 INRTPSMLLQGKSPYEMLYKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYP 544
Query: 406 PHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSHSRQQPSKP 465
QKG+ +D +E K+F +
Sbjct: 545 HGQKGWRLFD-------------LEEQKFFVS---------------------------- 563
Query: 466 LLTYKRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRESKPPERYINCMTATLSSIPIPSS 525
++ E P +R + + ++ +TA + P++
Sbjct: 564 -----------------RDVIFQETEFPYSKMSCNRFTSSHKAFLAAVTAGME----PTT 602
Query: 526 YKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFSIKLRSDGSIDRYKA 585
Y +AM + W++A+ +E+ +L NQT+ IV P + LG+K+V+ IK RSDG+I+RYKA
Sbjct: 603 YNEAMVDKAWREAMSAEIESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKA 662
Query: 586 HLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDVKNAFLHGDLQEEV 645
LVVLGN Q+ G+DYDETFAPVAKM+TVR L +AA++ W +HQMDV NAFLHGDL+EEV
Sbjct: 663 RLVVLGNCQKEGVDYDETFAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEV 722
Query: 646 YIKLPNGMPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGFEFSQSRYDPSLFLQRT 705
Y+KLP G P+ VC+L +SLYGLKQAPR WF K S L + F+QS D SLF
Sbjct: 723 YMKLPQGFQCDDPSKVCRLHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFSYNN 782
Query: 706 PKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYFLGLEVHYHHEGVFL 765
V +LVYVDD++++GS DA+++ K+ L S FHMK+LG L YFLG+EV + +G +L
Sbjct: 783 DGVFVHVLVYVDDLIISGSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQGFYL 842
Query: 766 NQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQYRKLVGSLIYVTITRP 825
+Q+KY+ D++ GL A P+E N K L D ++YR+LVG LIY+ +TRP
Sbjct: 843 SQRKYVLDIISEMGLLGARPSAFPLEQNHKLSLSTSPLLSDSSRYRRLVGRLIYLAVTRP 902
Query: 826 DISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVGSSIKLQAYSDADWAGC 885
++S++VHT+++FMQ PR H +A +++RYL +G+ S++++ + D+D+A C
Sbjct: 903 ELSYSVHTLAQFMQNPRQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAAC 962
Query: 886 PDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEIIWLRGLLTELGF 945
P TR+S TG+ + LG+ PISWK KKQ ++S+SS EAEYRAM+ E++WL+ +L +LG
Sbjct: 963 PLTRRSLTGYFVQLGDTPISWKTKKQPTISRSSAEAEYRAMAFLTQELMWLKRVLYDLGV 1022
Query: 946 SQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDRRIINLPHVSTSVQTAD 1005
S Q + +D+ SAI ++ NPV HERTKH+EVDCH IR+A II V + Q AD
Sbjct: 1023 SHVQAMRIFSDSKSAIALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLAD 1082
Query: 1006 IFTKSL 1011
I TK+L
Sbjct: 1083 ILTKAL 1088
>At1g31210 putative reverse transcriptase
Length = 1415
Score = 567 bits (1461), Expect = e-161
Identities = 312/771 (40%), Positives = 456/771 (58%), Gaps = 38/771 (4%)
Query: 278 GEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCE 337
GE++S+ + L +GI + SCP TP QNG+AERK+RHL+++ ++L SH P +FW E
Sbjct: 584 GEFVSNKLKTHLSEHGIHHRISCPYTPQQNGLAERKHRHLVELGLSMLFHSHTPQKFWVE 643
Query: 338 ALSTAVHLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSV 397
+ TA ++INR+PS + N SP+ L+G P+YS+LRVFG CY L P + KF +S+
Sbjct: 644 SFFTANYIINRLPSSVLKNLSPYEALFGEKPDYSSLRVFGSACYPCLRPLAQNKFDPRSL 703
Query: 398 ECAFLGYSPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSH 457
+C FLGY+ KG+ C+ P ++ +SRNVIF E++ F + + S L H
Sbjct: 704 QCVFLGYNSQYKGYRCFYPPTGKVYISRNVIFNESELPFKEKYQSLVPQYSTPLLQAWQH 763
Query: 458 SR-----------QQPSKP--LLTYK-RRSTATHGPPQDNSLVAGPVEEPAPL------- 496
++ Q SKP L TY + T P+ S G EE P+
Sbjct: 764 NKISEISVPAAPVQLFSKPIDLNTYAGSQVTEQLTDPEPTSNNEGSDEEVNPVAEEIAAN 823
Query: 497 ------------RRSSRESKPPERYINCMTATLSSIPIPSSYKQAMENDCWQKAIESELL 544
R + KP RY +T+ +++ P + AM++ W +A+ E+
Sbjct: 824 QEQVINSHAMTTRSKAGIQKPNTRYA-LITSRMNTAE-PKTLASAMKHPGWNEAVHEEIN 881
Query: 545 ALEENQTWDIVPCPSSVKPLGSKFVFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETF 604
+ TW +VP + L SK+VF KL DGSID+ KA LV G QE G+DY ETF
Sbjct: 882 RVHMLHTWSLVPPTDDMNILSSKWVFKTKLHPDGSIDKLKARLVAKGFDQEEGVDYLETF 941
Query: 605 APVAKMTTVRTILAIAASQAWPLHQMDVKNAFLHGDLQEEVYIKLPNGMPTPS-PNTVCK 663
+PV + T+R +L ++ S+ WP+ Q+DV NAFLHG+LQE V++ P+G P P VC+
Sbjct: 942 SPVVRTATIRLVLDVSTSKGWPIKQLDVSNAFLHGELQEPVFMYQPSGFIDPQKPTHVCR 1001
Query: 664 LKRSLYGLKQAPRVWFEKFRSTLLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTG 723
L +++YGLKQAPR WF+ F + LL + F S+ DPSLF+ ++ LL+YVDDI++TG
Sbjct: 1002 LTKAIYGLKQAPRAWFDTFSNFLLDYGFVCSKSDPSLFVCHQDGKILYLLLYVDDILLTG 1061
Query: 724 SDQDAISRIKNLLHSTFHMKELGRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNA 783
SDQ + + L + F MK+LG YFLG+++ + G+FL+Q Y D++Q AG+++
Sbjct: 1062 SDQSLLEDLLQALKNRFSMKDLGPPRYFLGIQIEDYANGLFLHQTAYATDILQQAGMSDC 1121
Query: 784 TLVDTPMEVNVKYRRDEGDHLDDPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRH 843
+ TP+ + E +PT +R L G L Y+TITRPDI FAV+ + + M +P
Sbjct: 1122 NPMPTPLPQQLDNLNSE--LFAEPTYFRSLAGKLQYLTITRPDIQFAVNFICQRMHSPTT 1179
Query: 844 FHLSAVQQIIRYLLGTLKRGLFFPVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAP 903
+++I+RY+ GT+ GL S++ L AYSD+D AGC +TR+STTG+C+ LG+
Sbjct: 1180 SDFGLLKRILRYIKGTIGMGLPIKRNSTLTLSAYSDSDHAGCKNTRRSTTGFCILLGSNL 1239
Query: 904 ISWKCKKQDSVSKSSTEAEYRAMSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQI 963
ISW K+Q +VS SSTEAEYRA++ A EI W+ LL +LG Q PT ++ DN SA+ +
Sbjct: 1240 ISWSAKRQPTVSNSSTEAEYRALTYAAREITWISFLLRDLGIPQYLPTQVYCDNLSAVYL 1299
Query: 964 AANPVYHERTKHIEVDCHSIREAYDRRIINLPHVSTSVQTADIFTKSLTRQ 1014
+ANP H R+KH + D H IRE +I H+S + Q AD+FTKSL R+
Sbjct: 1300 SANPALHNRSKHFDTDYHYIREQVALGLIETQHISATFQLADVFTKSLPRR 1350
>At4g17450 retrotransposon like protein
Length = 1433
Score = 567 bits (1460), Expect = e-161
Identities = 299/745 (40%), Positives = 446/745 (59%), Gaps = 28/745 (3%)
Query: 285 FQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVH 344
F + ++GI++ SCP TP QN V ERK++H+L+V R LL +S++P FW + + TAV
Sbjct: 676 FTDLFAAHGIVAYHSCPETPEQNSVVERKHQHILNVARALLFQSNIPLEFWGDCVLTAVF 735
Query: 345 LINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGY 404
LINR+P+P + N+SP+ +L PP Y +L+ FGC+CY P++R KF ++ C FLGY
Sbjct: 736 LINRLPTPVLNNKSPYEKLKNIPPAYESLKTFGCLCYSSTSPKQRHKFEPRARACVFLGY 795
Query: 405 SPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSHSRQQPSK 464
KG+ D + +SR+VIF E+ + F S + PL Q P++
Sbjct: 796 PLGYKGYKLLDIETHAVSISRHVIFHEDIFPFISS-TIKDDIKDFFPLL------QFPAR 848
Query: 465 PL-LTYKRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRESKPPERY--INCMTAT----- 516
L ++ S P QD S V PL S R+ KPP+ +C T
Sbjct: 849 TDDLPLEQTSIIDTHPHQDVSSSKALVPFD-PL--SKRQKKPPKHLQDFHCYNNTTEPFH 905
Query: 517 -----LSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFS 571
+++ IP Y +A + W A++ E+ A+ TW +V P + K +G K+VF+
Sbjct: 906 AFINNITNAVIPQRYSEAKDFKAWCDAMKEEIGAMVRTNTWSVVSLPPNKKAIGCKWVFT 965
Query: 572 IKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMD 631
IK +DGSI+RYKA LV G QE GLDY+ETF+PVAK+T+VR +L +AA W +HQ+D
Sbjct: 966 IKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSVRMMLLLAAKMKWSVHQLD 1025
Query: 632 VKNAFLHGDLQEEVYIKLPNGMP-----TPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTL 686
+ NAFL+GDL EE+Y+K+P G P+ +C+L +S+YGLKQA R W+ K +TL
Sbjct: 1026 ISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSIYGLKQASRQWYLKLSNTL 1085
Query: 687 LGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELG 746
G F +S D +LF++ ++ +LVYVDDI++ + DA+++ L S F +++LG
Sbjct: 1086 KGMGFQKSNADHTLFIKYANGVLMGVLVYVDDIMIVSNSDDAVAQFTAELKSYFKLRDLG 1145
Query: 747 RLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDD 806
YFLG+E+ +G+ + Q+KYI +L+ G + P++ +VK +++G L D
Sbjct: 1146 AAKYFLGIEIARSEKGISICQRKYILELLSTTGFLGSKPSSIPLDPSVKLNKEDGVPLTD 1205
Query: 807 PTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFF 866
T YRKLVG L+Y+ ITRPDI++AV+T+ +F AP HLSAV +++RYL GT+ +GLF+
Sbjct: 1206 STSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLSAVHKVLRYLKGTVGQGLFY 1265
Query: 867 PVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAM 926
L+ Y+D+D+ C D+R+ +CMF+G+ +SWK KKQD+VS S+ EAE+RAM
Sbjct: 1266 SADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWKSKKQDTVSMSTAEAEFRAM 1325
Query: 927 SAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREA 986
S E+IWL L + P L+ DNT+A+ I N V+HERTK +E+DC+ REA
Sbjct: 1326 SQGTKEMIWLSRLFDDFKVPFIPPAYLYCDNTAALHIVNNSVFHERTKFVELDCYKTREA 1385
Query: 987 YDRRIINLPHVSTSVQTADIFTKSL 1011
+ + V T Q AD TK++
Sbjct: 1386 VESGFLKTMFVETGEQVADPLTKAI 1410
>At3g61330 copia-type polyprotein
Length = 1352
Score = 531 bits (1368), Expect = e-151
Identities = 275/745 (36%), Positives = 437/745 (57%), Gaps = 13/745 (1%)
Query: 278 GEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCE 337
GE+ S F ++ + NGI Q + P +P QNGV ERKNR +L++ R++L +P W E
Sbjct: 599 GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVVERKNRTILEMARSMLKSKRLPKELWAE 658
Query: 338 ALSTAVHLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSV 397
A++ AV+L+NR P+ S+ ++P G P S LRVFG + + H+P ++R+K +S
Sbjct: 659 AVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSE 718
Query: 398 ECAFLGYSPHQKGFLCYDPNLRRIRVSRNVIF-QENKYFFASHHDLVSSPISILPLFYDS 456
+ F+GY + KG+ Y+P+ ++ +SRN++F +E ++ + S+ + + P F +
Sbjct: 719 KYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEE----DYNFFPHFEED 774
Query: 457 HSRQQPSKPLLTYKRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRES-KPPERYINCMTA 515
+P T +S + E P RS +E + E N
Sbjct: 775 EPEPTREEP----PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLF 830
Query: 516 TLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFSIKLR 575
L + P +++A+E W+ A++ E+ ++++N TW++ P+ K +G K+V+ K
Sbjct: 831 CLFAECEPMDFQKAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKN 890
Query: 576 SDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDVKNA 635
S G ++RYKA LV G Q G+DYDE FAPVA++ TVR I+++AA W +HQMDVK+A
Sbjct: 891 SKGEVERYKARLVAKGYSQRVGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSA 950
Query: 636 FLHGDLQEEVYIKLPNG-MPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGFEFSQS 694
FL+GDL+EEVYI+ P G + + V +LK+ LYGLKQAPR W + +F +
Sbjct: 951 FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKVLYGLKQAPRAWNTRIDKYFKEKDFIKC 1010
Query: 695 RYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYFLGL 754
Y+ +L+++ + +++ +YVDD++ TG++ K + F M ++G ++Y+LG+
Sbjct: 1011 PYEHALYIKIQKEDILIACLYVDDLIFTGNNPSIFEEFKKEMTKEFEMTDIGLMSYYLGI 1070
Query: 755 EVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQYRKLV 814
EV G+F+ Q+ Y +++++ + ++ V TPME +K + E DPT ++ LV
Sbjct: 1071 EVKQEDNGIFITQEGYAKEVLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLV 1130
Query: 815 GSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVGSSIKL 874
GSL Y+T TRPDI +AV VS++M+ P H A ++I+RY+ GT+ GL + S KL
Sbjct: 1131 GSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKL 1190
Query: 875 QAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEII 934
YSD+DW G D RKST+G+ ++G+ +W KKQ V+ S+ EAEY A ++ I
Sbjct: 1191 VGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAI 1250
Query: 935 WLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDRRIINL 994
WLR LL EL Q++PT + DN SAI +A NPV+H+R+KHI+ H IRE ++ + L
Sbjct: 1251 WLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQL 1310
Query: 995 PHVSTSVQTADIFTKSLTRQRHNFL 1019
+V T Q AD FTK L +R NF+
Sbjct: 1311 EYVKTHDQVADFFTKPL--KRENFI 1333
>At3g60170 putative protein
Length = 1339
Score = 530 bits (1365), Expect = e-150
Identities = 273/752 (36%), Positives = 443/752 (58%), Gaps = 18/752 (2%)
Query: 278 GEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCE 337
GE+ S+ F EF +S+GI Q + TP QNGVAERKNR +++ VR++L E VP FW E
Sbjct: 567 GEFTSNEFGEFCRSHGISRQLTAAFTPQQNGVAERKNRTIMNAVRSMLSERQVPKMFWSE 626
Query: 338 ALSTAVHLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSV 397
A +VH+ NR P+ ++ +P G P RVFGC+ YVH+P Q+R+K +S
Sbjct: 627 ATKWSVHIQNRSPTAAVEGMTPEEAWSGRKPVVEYFRVFGCIGYVHIPDQKRSKLDDKSK 686
Query: 398 ECAFLGYSPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSH 457
+C FLG S K + YDP +++I +S++V+F E+K + D+ + +++ D
Sbjct: 687 KCVFLGVSEESKAWRLYDPVMKKIVISKDVVFDEDKSWDWDQADVEAKEVTLECGDEDDE 746
Query: 458 SRQQPSKPLLTYKRRSTATHGPPQDNSLVAGPVEEPAPLR-RSSRESKPP---------- 506
+ +P+ + + ++A P+P+ + +RE +PP
Sbjct: 747 KNSEVVEPIAVASPNHVGSDNNVSSSPILAPSSPAPSPVAAKVTRERRPPGWMADYETGE 806
Query: 507 ----ERYINCMTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVK 562
E ++ M + + P + A+++ W++A+E E+ ++ +N TW++ P
Sbjct: 807 GEEIEENLSVMLLMMMTEADPIQFDDAVKDKIWREAMEHEIESIVKNNTWELTTLPKGFT 866
Query: 563 PLGSKFVFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAAS 622
P+G K+V+ KL DG +D+YKA LV G Q YG+DY E FAPVA++ TVRTILAI++
Sbjct: 867 PIGVKWVYKTKLNEDGEVDKYKARLVAKGYAQCYGIDYTEVFAPVARLDTVRTILAISSQ 926
Query: 623 QAWPLHQMDVKNAFLHGDLQEEVYIKLPNG-MPTPSPNTVCKLKRSLYGLKQAPRVWFEK 681
W + Q+DVK+AFLHG+L+EEVY++ P G + V KL+++LYGLKQAPR W+ +
Sbjct: 927 FNWEIFQLDVKSAFLHGELKEEVYVRQPEGFIREGEEEKVYKLRKALYGLKQAPRAWYSR 986
Query: 682 FRSTLLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFH 741
+ L EF + + +LF + ++++ +YVDD++ TGSD+ K + F
Sbjct: 987 IEAYFLKEEFERCPSEHTLFTKTRVGNILIVSLYVDDLIFTGSDKAMCDEFKKSMMLEFE 1046
Query: 742 MKELGRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEG 801
M +LG++ +FLG+EV G+F+ Q++Y ++++ G+ + V P+ K +DE
Sbjct: 1047 MSDLGKMKHFLGIEVKQSDGGIFICQRRYAREVLARFGMDESNAVKNPIVPGTKLTKDEN 1106
Query: 802 DHLDDPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLK 861
D T +++LVGSL+Y+T+TRPD+ + V +S+FM PR H A ++I+RYL GT++
Sbjct: 1107 GEKVDETMFKQLVGSLMYLTVTRPDLMYGVCLISRFMSNPRMSHWLAAKRILRYLKGTVE 1166
Query: 862 RGLFF--PVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSST 919
G+F+ S+KL A++D+D+AG + R+ST+G+ + + I W KKQ V+ S+T
Sbjct: 1167 LGIFYRRRKNRSLKLMAFTDSDYAGDLNDRRSTSGFVFLMASGAICWASKKQPVVALSTT 1226
Query: 920 EAEYRAMSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVD 979
EAEY A + + +WLR +L +LG + T ++ DN+S IQ++ +PV H ++KHIEV
Sbjct: 1227 EAEYIAAAFCACQCVWLRKVLEKLGAEEKSATVINCDNSSTIQLSKHPVLHGKSKHIEVR 1286
Query: 980 CHSIREAYDRRIINLPHVSTSVQTADIFTKSL 1011
H +R+ + ++ L + T Q ADIFTK L
Sbjct: 1287 FHYLRDLVNGDVVKLEYCPTEDQVADIFTKPL 1318
>At1g58140 hypothetical protein
Length = 1320
Score = 530 bits (1365), Expect = e-150
Identities = 273/739 (36%), Positives = 432/739 (57%), Gaps = 41/739 (5%)
Query: 278 GEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCE 337
GE+ S F ++ + NGI Q + P +P QNGVAERKNR +L++ R++L +P W E
Sbjct: 599 GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658
Query: 338 ALSTAVHLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSV 397
A++ AV+L+NR P+ S+ ++P G P S LRVFG + + H+P ++R+K +S
Sbjct: 659 AVACAVYLLNRSPTKSVSGKTPQEAWSGRKPGVSHLRVFGSIAHAHVPDEKRSKLDDKSE 718
Query: 398 ECAFLGYSPHQKGFLCYDPNLRRIRVSRNVIF-QENKYFFASHHDLVSSPISILPLFYDS 456
+ F+GY + KG+ Y+P+ ++ +SRN++F +E ++ + S+ + + P F +
Sbjct: 719 KYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEE----DYNFFPHFEED 774
Query: 457 HSRQQPSKPLLTYKRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRESKPPERYINCMTAT 516
+P P EEP S S+ E+ C
Sbjct: 775 KPEPTREEP-----------------------PSEEPTTPPTSPTSSQIEEK---CE--- 805
Query: 517 LSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFSIKLRS 576
P +++A+E W+ A++ E+ ++++N TW++ P+ K +G K+V+ K S
Sbjct: 806 ------PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAKKNS 859
Query: 577 DGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDVKNAF 636
G ++RYKA LV G Q G+DYDE FAPVA++ TVR I+++AA W +HQMDVK+AF
Sbjct: 860 KGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAF 919
Query: 637 LHGDLQEEVYIKLPNG-MPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGFEFSQSR 695
L+GDL+EEVYI+ P G + + V +LK++LYGLKQAPR W + +F +
Sbjct: 920 LNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCP 979
Query: 696 YDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYFLGLE 755
Y+ +L+++ + +++ +YVDD++ TG++ K + F M ++G ++Y+LG+E
Sbjct: 980 YEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIE 1039
Query: 756 VHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQYRKLVG 815
V G+F+ Q+ Y +++++ + ++ V TPME +K + E DPT ++ LVG
Sbjct: 1040 VKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVG 1099
Query: 816 SLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVGSSIKLQ 875
SL Y+T TRPDI +AV VS++M+ P H A ++I+RY+ GT+ GL + S KL
Sbjct: 1100 SLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLV 1159
Query: 876 AYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEIIW 935
YSD+DW G D RKST+G+ ++G+ +W KKQ V+ S+ EAEY A ++ IW
Sbjct: 1160 GYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIW 1219
Query: 936 LRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDRRIINLP 995
LR LL EL Q++PT + DN SAI +A NPV+H+R+KHI+ H IRE ++ + L
Sbjct: 1220 LRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLE 1279
Query: 996 HVSTSVQTADIFTKSLTRQ 1014
+V T Q ADIFTK L R+
Sbjct: 1280 YVKTHDQVADIFTKPLKRE 1298
>At1g48710 hypothetical protein
Length = 1352
Score = 530 bits (1364), Expect = e-150
Identities = 274/740 (37%), Positives = 435/740 (58%), Gaps = 11/740 (1%)
Query: 278 GEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCE 337
GE+ S F ++ + NGI Q + P +P QNGVAERKNR +L++ R++L +P W E
Sbjct: 599 GEFTSKEFLKYCEDNGIRRQLTVPRSPQQNGVAERKNRTILEMARSMLKSKRLPKELWAE 658
Query: 338 ALSTAVHLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSV 397
A++ AV+L+NR P+ S+ ++P G S LRVFG + + H+P ++R+K +S
Sbjct: 659 AVACAVYLLNRSPTKSVSGKTPQEAWSGRKSGVSHLRVFGSIAHAHVPDEKRSKLDDKSE 718
Query: 398 ECAFLGYSPHQKGFLCYDPNLRRIRVSRNVIF-QENKYFFASHHDLVSSPISILPLFYDS 456
+ F+GY + KG+ Y+P+ ++ +SRN++F +E ++ + S+ + + P F +
Sbjct: 719 KYIFIGYDNNSKGYKLYNPDTKKTIISRNIVFDEEGEWDWNSNEE----DYNFFPHFEED 774
Query: 457 HSRQQPSKPLLTYKRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRES-KPPERYINCMTA 515
+P T +S + E P RS +E + E N
Sbjct: 775 EPEPTREEP----PSEEPTTPPTSPTSSQIEESSSERTPRFRSIQELYEVTENQENLTLF 830
Query: 516 TLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFSIKLR 575
L + P +++A+E W+ A++ E+ ++++N TW++ P+ K +G K+V+ K
Sbjct: 831 CLFAECEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKN 890
Query: 576 SDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDVKNA 635
S G ++RYKA LV G Q G+DYDE FAPVA++ TVR I+++AA W +HQMDVK+A
Sbjct: 891 SKGEVERYKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSA 950
Query: 636 FLHGDLQEEVYIKLPNG-MPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGFEFSQS 694
FL+GDL+EEVYI+ P G + + V +LK++LYGLKQAPR W + +F +
Sbjct: 951 FLNGDLEEEVYIEQPQGYIVKGEEDKVLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKC 1010
Query: 695 RYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYFLGL 754
Y+ +L+++ + +++ +YVDD++ TG++ K + F M ++G ++Y+LG+
Sbjct: 1011 PYEHALYIKIQKEDILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGI 1070
Query: 755 EVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQYRKLV 814
EV G+F+ Q+ Y +++++ + ++ V TPME +K + E DPT ++ LV
Sbjct: 1071 EVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLV 1130
Query: 815 GSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVGSSIKL 874
GSL Y+T TRPDI +AV VS++M+ P H A ++I+RY+ GT+ GL + S KL
Sbjct: 1131 GSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKL 1190
Query: 875 QAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEII 934
YSD+DW G D RKST+G+ ++G+ +W KKQ V S+ EAEY A ++ I
Sbjct: 1191 VGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAI 1250
Query: 935 WLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDRRIINL 994
WLR LL EL Q++PT + DN SAI +A NPV+H+R+KHI+ H IRE ++ + L
Sbjct: 1251 WLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQL 1310
Query: 995 PHVSTSVQTADIFTKSLTRQ 1014
+V T Q ADIFTK L R+
Sbjct: 1311 EYVKTHDQVADIFTKPLKRE 1330
>At1g26990 polyprotein, putative
Length = 1436
Score = 513 bits (1320), Expect = e-145
Identities = 283/758 (37%), Positives = 421/758 (55%), Gaps = 65/758 (8%)
Query: 285 FQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVH 344
F E GI + CP TP QN V ERK++HLL+V R L+ +S +P +W + + TAV
Sbjct: 691 FNELFAKEGIKADHPCPETPEQNFVVERKHQHLLNVARALMFQSGIPLEYWGDCVLTAVF 750
Query: 345 LINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGY 404
LINR+ SP I NE+P+ RL P+YS+L+ FGC+CY P+ RTKF ++ C FLGY
Sbjct: 751 LINRLLSPVINNETPYERLTKGKPDYSSLKAFGCLCYCSTSPKSRTKFDPRAKACIFLGY 810
Query: 405 SPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSHSRQQPSK 464
KG+ D + +SR+VIF E+ + FAS + + + P Y
Sbjct: 811 PMGYKGYKLLDIETYSVSISRHVIFYEDIFPFASSN-ITDAAKDFFPHIYLPAPNNDEHL 869
Query: 465 PLLTYKRRSTATHGPPQDNSLVAGPVEEPAPLRRS------------------------- 499
PL+ + S A H + +S++ P E + +R
Sbjct: 870 PLV--QSSSDAPHNHDESSSMIFVPSEPKSTRQRKLPSHLQDFHCYNNTPTTTKTSPYPL 927
Query: 500 ------SRESKPPERYINCMTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWD 553
S S+P +IN +TAT +P Y +A + W A+ E+ A TW
Sbjct: 928 TNYISYSYLSEPFGAFINIITAT----KLPQKYSEARLDKVWNDAMGKEISAFVRTGTWS 983
Query: 554 IVPCPSSVKPLGSKFVFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTV 613
I P+ +G K++ +IK +DGSI+R+KA LV G Q+ G+D+ TF+PVAKM TV
Sbjct: 984 ICDLPAGKVAVGCKWIITIKFLADGSIERHKARLVAKGYTQQEGIDFFNTFSPVAKMVTV 1043
Query: 614 RTILAIAASQAWPLHQMDVKNAFLHGDLQEEVYIKLPNGMPTPSPNTVCKLKRSLYGLKQ 673
+ +L++A W LHQ+D+ NA L+GDL+EE+Y+KLP G + G +
Sbjct: 1044 KVLLSLAPKMKWYLHQLDISNALLNGDLEEEIYMKLPPGYS------------EIQGQEV 1091
Query: 674 APRVWFEKFRSTLLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIK 733
+P ++ D +LF++ +V+LVYVDDI++ + + A + +
Sbjct: 1092 SPN---------------AKCHGDHTLFVKAQDGFFLVVLVYVDDILIASTTEAASAELT 1136
Query: 734 NLLHSTFHMKELGRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVN 793
+ L S F +++LG +FLG+E+ + +G+ L Q+KY+ DL+ + ++ PME N
Sbjct: 1137 SQLSSFFQLRDLGEPKFFLGIEIARNADGISLCQRKYVLDLLASSDFSDCKPSSIPMEPN 1196
Query: 794 VKYRRDEGDHLDDPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQII 853
K +D G L+D QYR+++G L Y+ +TRPDI+FAV ++++ AP HL A+ +I+
Sbjct: 1197 QKLSKDTGTLLEDGKQYRRILGKLQYLCLTRPDINFAVSKLAQYSSAPTDIHLQALHKIL 1256
Query: 854 RYLLGTLKRGLFFPVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDS 913
RYL GT+ +GLF+ ++ L+ +SD+DW CPDTR+ TG+ +F+GN+ +SW+ KKQD
Sbjct: 1257 RYLKGTIGQGLFYGADTNFDLRGFSDSDWQTCPDTRRCVTGFAIFVGNSLVSWRSKKQDV 1316
Query: 914 VSKSSTEAEYRAMSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERT 973
VS SS EAEYRAMS A E+IWL +LT P L+ DN +A+ IA N V+HERT
Sbjct: 1317 VSMSSAEAEYRAMSVATKELIWLGYILTAFKIPFTHPAYLYCDNEAALHIANNSVFHERT 1376
Query: 974 KHIEVDCHSIREAYDRRIINLPHVSTSVQTADIFTKSL 1011
KHIE DCH +RE + I+ V T Q AD TK L
Sbjct: 1377 KHIENDCHKVRECIEAGILKTIFVRTDNQLADTLTKPL 1414
>At3g25450 hypothetical protein
Length = 1343
Score = 506 bits (1304), Expect = e-143
Identities = 282/755 (37%), Positives = 432/755 (56%), Gaps = 23/755 (3%)
Query: 278 GEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCE 337
GE++SH FQEF GI + P TP QNGV ER+NR LL + R++L ++P+ W E
Sbjct: 557 GEFLSHEFQEFCAKEGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMNMPNYLWGE 616
Query: 338 ALSTAVHLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSV 397
A+ + +LINR+ + S+ N++P+ PN LRVFGCV Y + K +S
Sbjct: 617 AVRHSTYLINRVGTRSLSNQTPYEVFKHKKPNVEHLRVFGCVSYAKVEVPNLKKLDDRSR 676
Query: 398 ECAFLGYSPHQKGFLCYDPNLRRIRVSRNVIFQENKYFF----ASHHDLVSSPISILPLF 453
+LG P K + DP RRI VSR+V+F EN+ + +S D S +I
Sbjct: 677 MLVYLGTEPGSKAYRLLDPTKRRIFVSRDVVFDENRSWMWQESSSETDKESGTFTITLSE 736
Query: 454 YDSHSRQQPSKPLLTYKRRSTATHGPPQDNSLVA--------GPVEEPAPLRRSSRESKP 505
+ ++ + + T + +D +++ EEP P+RRS R+
Sbjct: 737 FGNNGVTE--NDISTEPEETEEAEINGEDENIIEEAETEEHDQSQEEPQPVRRSQRQVIR 794
Query: 506 P---ERYINCMTATLSSIPI-----PSSYKQAMENDCWQKAIESELLALEENQTWDIVPC 557
P + Y+ C + + P +K+A ++ W+ A + E+ ++E+N+TW +V
Sbjct: 795 PNYLKDYVLCAEIEAEHLLLAVNDEPWDFKEANKSKEWRDACKEEIQSIEKNRTWSLVDL 854
Query: 558 PSSVKPLGSKFVFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTIL 617
P K +G K+VF +K SDGSI++YKA LV G Q +G+D++E FAPVA++ TVR I+
Sbjct: 855 PVGSKAIGVKWVFKLKHNSDGSINKYKARLVAKGYVQRHGVDFEEVFAPVARIETVRLII 914
Query: 618 AIAASQAWPLHQMDVKNAFLHGDLQEEVYIKLPNGMPT-PSPNTVCKLKRSLYGLKQAPR 676
A+AAS W +H +DVK AFLHG+L+E+VY+ P G S V KL ++LYGL+QAPR
Sbjct: 915 ALAASNGWEIHHLDVKTAFLHGELREDVYVSQPEGFTNKESKEKVYKLHKALYGLRQAPR 974
Query: 677 VWFEKFRSTLLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLL 736
W K L +F + +PSL+ ++ + ++V+ VYVDD++VTGS+ D I K +
Sbjct: 975 AWNTKLNEILKELKFEKCHKEPSLYRKQEGENILVVAVYVDDLLVTGSNLDIILNFKKGM 1034
Query: 737 HSTFHMKELGRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKY 796
F M +LG+LTY+LG+EV +G+ L Q++Y + +++ AG++ V+TPM +++
Sbjct: 1035 VGKFEMSDLGKLTYYLGIEVLQSKDGITLKQERYAKKILEEAGMSKCNTVNTPMIASLEL 1094
Query: 797 RRDEGDHLDDPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYL 856
+ + + D T YR+ +G L Y+ TRPD+S+ V +S+++Q PR H +A++QI+RYL
Sbjct: 1095 SKAQDEKRIDETDYRRNIGCLRYLLHTRPDLSYNVGILSRYLQEPRESHGAALKQILRYL 1154
Query: 857 LGTLKRGLFFPVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSK 916
GT GL+F G + L YSD+ D KST G +L + PI+W +KQ V+
Sbjct: 1155 QGTTSHGLYFKKGENAGLIGYSDSSHNVDLDDGKSTGGHIFYLNDCPITWCSQKQQVVTL 1214
Query: 917 SSTEAEYRAMSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHI 976
SS EAE+ A + A + IWL+ LL E+ ++ + + DN SAI + NPV+H R+KHI
Sbjct: 1215 SSCEAEFMAATEAAKQAIWLQELLAEVIGTECEKVTIRVDNKSAIALTKNPVFHGRSKHI 1274
Query: 977 EVDCHSIREAYDRRIINLPHVSTSVQTADIFTKSL 1011
H IRE + I + HV Q ADI TK+L
Sbjct: 1275 HRRYHFIRECVENGQIEVEHVPGVRQKADILTKAL 1309
>At2g23330 putative retroelement pol polyprotein
Length = 1496
Score = 503 bits (1295), Expect = e-142
Identities = 254/505 (50%), Positives = 342/505 (67%), Gaps = 1/505 (0%)
Query: 509 YINCMTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKF 568
+I M A L S P +K A+ W +A+ E+ ALE N TWDI P K + SK+
Sbjct: 974 HIAFMAAILDSNE-PKHFKDAILIKEWCEAMSKEIDALEANHTWDITDLPHGKKAISSKW 1032
Query: 569 VFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLH 628
V+ +K SDG+++R+KA LVV+GN Q+ G+D+ ETFAPVAK+TTVRTILA+AA++ W +H
Sbjct: 1033 VYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTTVRTILAVAAAKDWEVH 1092
Query: 629 QMDVKNAFLHGDLQEEVYIKLPNGMPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLG 688
QMDV NAFLHGDL+EEVY++LP G P+ VC+L++SLYGLKQAPR WF K + L
Sbjct: 1093 QMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLKQAPRCWFSKLSTALRN 1152
Query: 689 FEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRL 748
F+QS D SLF + ++ +LVYVDD++V G++ DAI R K+ LH FHMK+LG+L
Sbjct: 1153 IGFTQSYEDYSLFSLKNGDTIIHVLVYVDDLIVAGNNLDAIDRFKSQLHKCFHMKDLGKL 1212
Query: 749 TYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPT 808
YFLGLEV +G L+Q+KY D+V+ GL P+ +N K G +P
Sbjct: 1213 KYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIALNHKLASITGPVFTNPE 1272
Query: 809 QYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPV 868
QYR+LVG IY+TITRPD+S+AVH +S+FMQAP H A +++RYL G+ +G+F
Sbjct: 1273 QYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALRLVRYLKGSPAQGIFLRS 1332
Query: 869 GSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSA 928
SS+ + AY D+D+ CP TR+S + + ++LG++PISWK KKQD+VS SS EAEYRAM+
Sbjct: 1333 DSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQDTVSYSSAEAEYRAMAY 1392
Query: 929 ACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYD 988
E+ WL+ LL +LG P LH D+ +AI IAANPV+HERTKHIE DCH +R+A
Sbjct: 1393 TLKELKWLKALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHERTKHIESDCHKVRDAVL 1452
Query: 989 RRIINLPHVSTSVQTADIFTKSLTR 1013
++I H+ T Q AD+ TKSL R
Sbjct: 1453 DKLITTEHIYTEDQVADLLTKSLPR 1477
Score = 147 bits (370), Expect = 4e-35
Identities = 88/279 (31%), Positives = 144/279 (51%), Gaps = 25/279 (8%)
Query: 288 FLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVHLIN 347
+ Q++GI+ Q SC TP QNG ERK+RH+L+V R L + ++P +FW E++ TA HLIN
Sbjct: 637 YFQTHGILHQTSCVDTPQQNGRVERKHRHILNVARACLFQGNLPVKFWGESILTATHLIN 696
Query: 348 RMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGYSPH 407
R PS + ++P+ L+G P+Y LR FGC+CY H+ P+ + KFT++S +C F+GY
Sbjct: 697 RTPSAVLKGKTPYELLFGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHG 756
Query: 408 QKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSHSRQQPSKPLL 467
+K + YD +I SR+V F E+ Y +A+ S + + P P+ P++
Sbjct: 757 KKAWRVYDLETGKIFASRDVRFHEDIYPYAT---ATQSNVPLPP----------PTPPMV 803
Query: 468 T---YKRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRESKPPERYINCMTATLSSIPIPS 524
+ ST D+S + P + S P R I+ +T S+ P+P
Sbjct: 804 NDDWFLPISTQVDSTNVDSSSSSSPAQ--------SGSIDQPPRSIDQSPST-STNPVPE 854
Query: 525 SYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKP 563
+ + ++I+ L + T +++ S P
Sbjct: 855 EIGSIVPSSSPSRSIDRSTSDLSASDTTELLSTGESSTP 893
>At2g13940 putative retroelement pol polyprotein
Length = 1501
Score = 498 bits (1283), Expect = e-141
Identities = 271/609 (44%), Positives = 372/609 (60%), Gaps = 37/609 (6%)
Query: 444 SSPISILPLFYDSHSRQQPSKPLLT------------YKRRSTATHGPPQDNSLVA-GPV 490
SSP+S+ P S S P+ P++ ++ ATH PP+ N V +
Sbjct: 884 SSPLSVSP----SGSPNTPTTPIVVPVASPIPVSPPKQRKSKRATHPPPKLNDYVLYNAM 939
Query: 491 EEPAPLRR----SSRESKPPERYINCMTATLSSIPIPSS----------------YKQAM 530
P+ + S+ S P + + +T +S SS +K+A+
Sbjct: 940 YTPSSIHALPADPSQSSTVPGKSLFPLTDYVSDAAFSSSHRAYLAAITDNVEPKHFKEAV 999
Query: 531 ENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFSIKLRSDGSIDRYKAHLVVL 590
+ W A+ +E+ ALE N+TWDIV P +GS++VF K SDG+++RYKA LVV
Sbjct: 1000 QIKVWNDAMFTEVDALEINKTWDIVDLPPGKVAIGSQWVFKTKYNSDGTVERYKARLVVQ 1059
Query: 591 GNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDVKNAFLHGDLQEEVYIKLP 650
GNKQ G DY ETFAPV +MTTVRT+L A+ W ++QMDV NAFLHGDL+EEVY+KLP
Sbjct: 1060 GNKQVEGEDYKETFAPVVRMTTVRTLLRNVAANQWEVYQMDVHNAFLHGDLEEEVYMKLP 1119
Query: 651 NGMPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGFEFSQSRYDPSLFLQRTPKGMV 710
G P+ VC+L++SLYGLKQAPR WF+K +LL F F QS D SLF +
Sbjct: 1120 PGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIEL 1179
Query: 711 VLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYFLGLEVHYHHEGVFLNQQKY 770
+L+YVDD+++ G+D + + K+ L F MK+LG+L YFLG+EV EG+FL+Q+KY
Sbjct: 1180 RVLIYVDDLLICGNDGYMLQKFKDYLSRCFSMKDLGKLKYFLGIEVSRGPEGIFLSQRKY 1239
Query: 771 IQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQYRKLVGSLIYVTITRPDISFA 830
D++ +G + TP+E N D+G L DP YR+LVG L+Y+ TRP++S++
Sbjct: 1240 ALDVIADSGNLGSRPAHTPLEQNHHLASDDGPLLSDPKPYRRLVGRLLYLLHTRPELSYS 1299
Query: 831 VHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVGSSIKLQAYSDADWAGCPDTRK 890
VH +++FMQ PR H A +++RYL G+ +G+ + L+ Y D+DW CP TR+
Sbjct: 1300 VHVLAQFMQNPREAHFDAALRVVRYLKGSPGQGILLNADPDLTLEVYCDSDWQSCPLTRR 1359
Query: 891 STTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEIIWLRGLLTELGFSQDQP 950
S + + + LG +PISWK KKQD+VS SS EAEYRAMS A EI WLR LL ELG Q P
Sbjct: 1360 SISAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSYALKEIKWLRKLLKELGIEQSTP 1419
Query: 951 TPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDRRIINLPHVSTSVQTADIFTKS 1010
L+ D+ +AI IAANPV+HERTKHIE DCHS+R+A II HV T+ Q AD+FTK+
Sbjct: 1420 ARLYCDSKAAIHIAANPVFHERTKHIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTKA 1479
Query: 1011 LTRQRHNFL 1019
L R + +L
Sbjct: 1480 LGRNQFLYL 1488
Score = 139 bits (349), Expect = 1e-32
Identities = 68/150 (45%), Positives = 95/150 (63%)
Query: 288 FLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVHLIN 347
+ + NGII Q SC TP QNG ERK+RH+L+V R LL ++ +P +FW E++ TA +LIN
Sbjct: 664 YFRENGIIHQTSCVGTPQQNGRVERKHRHILNVARALLFQASLPIKFWGESILTAAYLIN 723
Query: 348 RMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGYSPH 407
R PS + +P+ L+G P YS LRVFG CYVH +++ KF +S C F+GY
Sbjct: 724 RTPSSILSGRTPYEVLHGSKPVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFG 783
Query: 408 QKGFLCYDPNLRRIRVSRNVIFQENKYFFA 437
+KG+ YD VSR+VIF+E + +A
Sbjct: 784 KKGWKVYDIERNEFLVSRDVIFREEVFPYA 813
>At2g15650 putative retroelement pol polyprotein
Length = 1347
Score = 498 bits (1281), Expect = e-141
Identities = 271/746 (36%), Positives = 434/746 (57%), Gaps = 18/746 (2%)
Query: 288 FLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVHLIN 347
F + GI Q + P +P QNG AERKNR L+++ R++L+E +P + W EA+ T+ +L N
Sbjct: 587 FCEDEGINRQVTLPYSPQQNGAAERKNRSLVEMARSMLVEQDLPLKLWAEAVYTSAYLQN 646
Query: 348 RMPSPSIGNE-SPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGYSP 406
R+PS +I ++ +P + GH PN S LR+FG +CYVH+P Q+R K A++ +GYS
Sbjct: 647 RLPSKAIEDDVTPMEKWCGHKPNVSHLRIFGSICYVHIPDQKRRKLDAKAKCGILIGYSN 706
Query: 407 HQKGFLCYDPNLRRIRVSRNVIFQENKYF-FASHHDLVSSPISILPLFYDSHSRQQPSKP 465
KG+ + ++ VSR+V+FQE+K + + ++ + + + +S +Q+ S
Sbjct: 707 QTKGYRVFLLEDEKVEVSRDVVFQEDKKWDWDKQEEVKKTFVMSINDIQESRDQQETSSH 766
Query: 466 LLTY-------KRRSTATHGPPQDNSLVAGPVEEPAPLRRSSRE--SKPP----ERYINC 512
L+ T++H Q N E +S +E K P +
Sbjct: 767 DLSQIDDHANNGEGETSSHVLSQVNDQEERETSESPKKYKSMKEILEKAPRMENDEAAQG 826
Query: 513 MTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFSI 572
+ A L + P +Y +A + W++A+ E+ +E+N+TW +V P + K+++ I
Sbjct: 827 IEACLVANEEPQTYDEARGDKEWEEAMNEEIKVIEKNRTWKLVDKPEKKNVISVKWIYKI 886
Query: 573 KLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDV 632
K + G+ ++KA LV G QEYG+DY ETFAPV++ T+R +LA AA W L+QMDV
Sbjct: 887 KTDASGNHVKHKARLVARGFSQEYGIDYLETFAPVSRYDTIRALLAYAAQMKWRLYQMDV 946
Query: 633 KNAFLHGDLQEEVYIKLPNGMPTPSPNT-VCKLKRSLYGLKQAPRVWFEKFRSTLLGFEF 691
K+AFL+G+L+EEVY+ P G V +L ++LYGLKQAPR W+E+ S + F
Sbjct: 947 KSAFLNGELEEEVYVTQPPGFVIEGKEEKVLRLYKALYGLKQAPRAWYERIDSYFIQNGF 1006
Query: 692 SQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYF 751
++S D +L+ ++ + ++++ +YVDD+++TG++ I+ K + F M +LG L YF
Sbjct: 1007 ARSMNDAALYSKKKGEDVLIVSLYVDDLIITGNNTHLINTFKKNMKDEFEMTDLGLLNYF 1066
Query: 752 LGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLD--DPTQ 809
LG+EV+ G+FL+Q+KY L+ G+ + V TP+ K + EGD + DPT+
Sbjct: 1067 LGMEVNQDDSGIFLSQEKYANKLIDKFGMKESKSVSTPLTPQGKRKGVEGDDKEFADPTK 1126
Query: 810 YRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVG 869
YR++VG L+Y+ +RPD+ +A +S++M +P H ++++RY+ GT G+ F
Sbjct: 1127 YRRIVGGLLYLCASRPDVMYASSYLSRYMSSPSIQHYQEAKRVLRYVKGTSNFGVLFTSK 1186
Query: 870 SSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAA 929
+ +L YSD+DW G + +KSTTG+ LG A W+ KQ +V++S+ EAEY A+ AA
Sbjct: 1187 ETPRLVGYSDSDWGGSLEDKKSTTGYVFTLGLAMFCWQSCKQQTVAQSTAEAEYIAVCAA 1246
Query: 930 CSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDR 989
++ IWL+ L + G + P+ DN SAI I NPV H RTKHIE+ H +REA +
Sbjct: 1247 TNQAIWLQRLFEDFGLKFKEGIPILCDNKSAIAIGRNPVQHRRTKHIEIKYHFVREAEHK 1306
Query: 990 RIINLPHVSTSVQTADIFTKSLTRQR 1015
+I L + Q AD+ TK+L+ R
Sbjct: 1307 GLIQLEYCKGEDQLADVLTKALSVSR 1332
>At4g10990 putative retrotransposon polyprotein
Length = 1203
Score = 465 bits (1196), Expect = e-131
Identities = 267/686 (38%), Positives = 382/686 (54%), Gaps = 80/686 (11%)
Query: 404 YSPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSS----PISILPLFYDSHSR 459
Y KG+ D I ++RNV+F E K+ F + L S P SILPL H
Sbjct: 335 YPSGYKGYKVLDLESHSISITRNVVFHETKFPFKTSKFLKESVDMFPNSILPLPAPLHFV 394
Query: 460 QQPSKPL-----------LTYKRRSTATHGPPQDNSLVAGPVE------EPAPLRRSSRE 502
+ S PL T S+A+ PP +++ + P+ R R
Sbjct: 395 E--SMPLDDDLRADDNNASTSNSASSASSIPPLPSTVNTQNTDALDIDTNSVPIARPKRN 452
Query: 503 SKPP----ERYINCMT-------ATLSSIPIPSS-------------------------- 525
+K P E + N + T +SI PSS
Sbjct: 453 AKAPAYLSEYHCNSVPFLSSLSPTTSTSIETPSSSIPPKKITTPYPMSTAISYDKLTPLF 512
Query: 526 ---------------YKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVF 570
+ QAM+++ W +A EL ALE+N+TW + +G K+VF
Sbjct: 513 HSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWIVESLTEGKNVVGCKWVF 572
Query: 571 SIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQM 630
+IK DGSI+RYKA LV G Q+ G+DY ETF+PVAK +V+ +L +AA+ W L QM
Sbjct: 573 TIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSVKLLLGLAAATGWSLTQM 632
Query: 631 DVKNAFLHGDLQEEVYIKLPNGMPTPS-----PNTVCKLKRSLYGLKQAPRVWFEKFRST 685
DV NAFLHG+L EE+Y+ LP G P+ VC+L +SLYGLKQA R W+++ S
Sbjct: 633 DVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSLYGLKQASRQWYKRLSSV 692
Query: 686 LLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKEL 745
LG F QS D ++F++ + ++V+LVYVDD+++ +D A+ +K LL S F +K+L
Sbjct: 693 FLGANFIQSPADNTMFVKVSCTSIIVVLVYVDDLMIASNDSSAVENLKELLRSEFKIKDL 752
Query: 746 GRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLD 805
G +FLGLE+ EG+ + Q+KY Q+L++ GL+ PM+ N+ ++ G L
Sbjct: 753 GPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSSIPMDPNLHLTKEMGTLLP 812
Query: 806 DPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLF 865
+ T YR+LVG L+Y+ ITRPDI+FAVHT+S+F+ AP H+ A +++RYL G +GL
Sbjct: 813 NATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDIHMQAAHKVLRYLKGNPGQGLM 872
Query: 866 FPVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRA 925
+ S + L +SDADW C D+R+S TG+C++LG + I+WK KKQ VS+SSTE+EYR+
Sbjct: 873 YSASSELCLNGFSDADWGTCKDSRRSVTGFCIYLGTSLITWKSKKQSVVSRSSTESEYRS 932
Query: 926 MSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIRE 985
++ A EIIWL+ LL +L + P L DN SA+ +A NPV+HERTKHIE+DCH++R+
Sbjct: 933 LAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLATNPVFHERTKHIEIDCHTVRD 992
Query: 986 AYDRRIINLPHVSTSVQTADIFTKSL 1011
+ HV T Q ADI TK L
Sbjct: 993 QIKAGKLKTLHVPTGNQLADILTKPL 1018
Score = 33.1 bits (74), Expect = 0.82
Identities = 26/77 (33%), Positives = 35/77 (44%), Gaps = 17/77 (22%)
Query: 264 PIFIK------NQNISL*QWGEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAER----- 312
P+F+K N I + +F +F++ G+I Q SC TP QN V ER
Sbjct: 280 PVFVKLIFTQYNAKIKAIRSDNVKELAFTKFVKEQGMIHQFSCAYTPQQNSVVERYPSGY 339
Query: 313 KNRHLLDVVRTLLLESH 329
K +LD LESH
Sbjct: 340 KGYKVLD------LESH 350
>At2g05390 putative retroelement pol polyprotein
Length = 1307
Score = 465 bits (1196), Expect = e-131
Identities = 269/758 (35%), Positives = 406/758 (53%), Gaps = 32/758 (4%)
Query: 278 GEYMSHSFQEFLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCE 337
GE++S FQ+F GI + P TP QNGV ER+NR LL + R++L +P+ W E
Sbjct: 525 GEFVSQEFQDFCAKEGINRHLTAPYTPQQNGVVERRNRTLLGMTRSILKHMKMPNYLWGE 584
Query: 338 ALSTAVHLINRMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSV 397
A+ + ++INR+ + S+ N++P+ PN LRVFGC+ Y + K +S
Sbjct: 585 AVRHSTYIINRVGTRSLQNQTPYEVFKQRKPNVEHLRVFGCIGYAKIEGPHLRKLDDRSK 644
Query: 398 ECAFLGYSPHQKGFLCYDPNLRRIRVSRNVIFQENKYFFASHHDLVSSPISILPLFYDSH 457
+LG P K + DP R+I N + +S S L L +
Sbjct: 645 MLVYLGTEPGSKAYRLLDPTNRKIIKWNNSDSETRD---------ISGTFS-LTLGEFGN 694
Query: 458 SRQQPSKPLLTYKR-----RSTATHGPPQDNSLVAGPVEEPAP--------LRRSSRESK 504
+ Q S + T K S G + N EE P LRRS+R+
Sbjct: 695 NGIQESDDIETEKNGEESENSHEEEGENEHNEQEQIDAEETQPSHATPLPTLRRSTRQVG 754
Query: 505 PPERY--------INCMTATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVP 556
P I L+ P +K+A + W+ A + E+L++E+N+TW ++
Sbjct: 755 KPNYLDDYVLMAEIEGEQVLLAINDEPWDFKEANKLKEWRDACKEEILSIEKNKTWSLID 814
Query: 557 CPSSVKPLGSKFVFSIKLRSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTI 616
P K +G K+VF IK SDGSI++YKA LV G Q +G+DYDE FA VA++ T+R I
Sbjct: 815 LPVRRKVIGLKWVFKIKRNSDGSINKYKARLVAKGYVQRHGIDYDEVFAHVARIETIRVI 874
Query: 617 LAIAASQAWPLHQMDVKNAFLHGDLQEEVYIKLPNGMPTP-SPNTVCKLKRSLYGLKQAP 675
+A+AAS W +H +DVK AFLHG+L+E+VY+ P G + V KL ++LYGLKQAP
Sbjct: 875 IALAASNGWEVHHLDVKTAFLHGELREDVYVTQPEGFTNKDNEGKVYKLHKALYGLKQAP 934
Query: 676 RVWFEKFRSTLLGFEFSQSRYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNL 735
R W K L F + +PS++ ++ K ++++ +YVDD++VTGS D I K
Sbjct: 935 RAWNTKLNKILQELNFVKCSKEPSVYRRQEEKKLLIVAIYVDDLLVTGSSLDLILCFKKD 994
Query: 736 LHSTFHMKELGRLTYFLGLEVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVK 795
+ F M +LG+LTY+LG+EV + G+ L Q++Y +++ AG++N V PM ++
Sbjct: 995 MAGKFEMSDLGQLTYYLGIEVLHRKNGIILRQERYAMKIIEEAGMSNCNPVLIPMAAGLE 1054
Query: 796 YRRDEGDHLDDPTQYRKLVGSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRY 855
+ + + YR+++G L Y+ TRPD+S+ V +S+++Q PR H +A++Q++RY
Sbjct: 1055 LCKAQEEKCITERDYRRMIGCLRYIVHTRPDLSYCVGVLSRYLQQPRESHGNALKQVLRY 1114
Query: 856 LLGTLKRGLFFPVGSSIKLQAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVS 915
L GT+ GL+ G L YSD+ + D KST G +L PI+W +KQ V+
Sbjct: 1115 LKGTMSHGLYLKRGFKSGLVGYSDSSHSADLDDGKSTAGHIFYLHQCPITWCSQKQQVVA 1174
Query: 916 KSSTEAEYRAMSAACSEIIWLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKH 975
SS EAE+ A + A + IWL+ L E+ + + + DN SAI + N V+H R+KH
Sbjct: 1175 LSSCEAEFMAATEAAKQAIWLQDLFAEVCGTTSEKVMIRVDNKSAIALTKNLVFHGRSKH 1234
Query: 976 IEVDCHSIREAYDRRIINLPHVSTSVQTADIFTKSLTR 1013
I H IRE + ++ + HV Q ADI TK L R
Sbjct: 1235 IHRRYHFIRECVENNLVEVDHVPGVEQRADILTKPLGR 1272
>At2g24660 putative retroelement pol polyprotein
Length = 1156
Score = 460 bits (1183), Expect = e-129
Identities = 241/505 (47%), Positives = 321/505 (62%), Gaps = 21/505 (4%)
Query: 515 ATLSSIPIPSSYKQAMENDCWQKAIESELLALEENQTWDIVPCPSSVKPLGSKFVFSIKL 574
A +++ P +K+A+ W A+ E+ ALE N+TWDIV P +GS++V+ K
Sbjct: 631 AAITANDEPKHFKEAVRIKVWNDAMFKEVDALEINKTWDIVDLPPGKVAIGSQWVYKTKY 690
Query: 575 RSDGSIDRYKAHLVVLGNKQEYGLDYDETFAPVAKMTTVRTILAIAASQAWPLHQMDVKN 634
+DGSI+RYKA LVV GNKQ G DY+ETFAPV KMTTVRT+L + A+ W ++QMDV N
Sbjct: 691 NADGSIERYKARLVVQGNKQVEGEDYNETFAPVVKMTTVRTLLRLVAANQWEVYQMDVNN 750
Query: 635 AFLHGDLQEEVYIKLPNGMPTPSPNTVCKLKRSLYGLKQAPRVWFEKFRSTLLGFEFSQS 694
AFLHGDL EEVY+KLP G P+ VC+L++SLYGLKQAPR WF+K LL F F Q
Sbjct: 751 AFLHGDLDEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAPRCWFKKLSDALLRFGFVQG 810
Query: 695 RYDPSLFLQRTPKGMVVLLVYVDDIVVTGSDQDAISRIKNLLHSTFHMKELGRLTYFLGL 754
D S F + +LVYVDD+++ G+D + + K L F MK+LG+L YFLG+
Sbjct: 811 HEDYSFFSYTRNGIELRVLVYVDDLLICGNDGYMLQKFKEYLGRCFSMKDLGKLKYFLGI 870
Query: 755 EVHYHHEGVFLNQQKYIQDLVQLAGLTNATLVDTPMEVNVKYRRDEGDHLDDPTQYRKLV 814
EV EG+FL+Q+KY D++ +G TP+E N D+G L D YR+LV
Sbjct: 871 EVSRGSEGIFLSQRKYALDIITDSGNLGCRPALTPLEQNHHLATDDGPLLADAKPYRRLV 930
Query: 815 GSLIYVTITRPDISFAVHTVSKFMQAPRHFHLSAVQQIIRYLLGTLKRGLFFPVGSSIKL 874
G L+Y+ TRP++S++VH +S+FMQ PR HL+A +I+R+L G+ +G+ + ++L
Sbjct: 931 GRLLYLLHTRPELSYSVHVLSQFMQTPREAHLAAAMRIVRFLKGSPGQGILLNADTELQL 990
Query: 875 QAYSDADWAGCPDTRKSTTGWCMFLGNAPISWKCKKQDSVSKSSTEAEYRAMSAACSEII 934
Y D+D+ CP TR+S + + + LG +PISWK KKQD+VS SS EAEYRAMS A EI
Sbjct: 991 DVYCDSDFQTCPKTRRSLSAYVVLLGGSPISWKTKKQDTVSHSSAEAEYRAMSVALREIK 1050
Query: 935 WLRGLLTELGFSQDQPTPLHADNTSAIQIAANPVYHERTKHIEVDCHSIREAYDRRIINL 994
WLR LL EL ANPV+HERTKHIE DCHS+R+A II
Sbjct: 1051 WLRKLLKEL---------------------ANPVFHERTKHIESDCHSVRDAVRDGIITT 1089
Query: 995 PHVSTSVQTADIFTKSLTRQRHNFL 1019
HV T+ Q ADIFTK+L R + +L
Sbjct: 1090 HHVRTNEQLADIFTKALGRSQFLYL 1114
Score = 135 bits (340), Expect = 1e-31
Identities = 71/169 (42%), Positives = 105/169 (62%), Gaps = 3/169 (1%)
Query: 288 FLQSNGIISQRSCPSTP*QNGVAERKNRHLLDVVRTLLLESHVPSRFWCEALSTAVHLIN 347
+ + +GI+ Q SC TP QNG ERK+RH+L+V R +L ++ +P +FW EA+ TA +LIN
Sbjct: 225 YFREHGIVHQTSCVGTPQQNGRVERKHRHILNVARAILFQASLPIQFWGEAVLTAAYLIN 284
Query: 348 RMPSPSIGNESPFTRLYGHPPNYSTLRVFGCVCYVHLPPQERTKFTAQSVECAFLGYSPH 407
R P+ SP+ L+ PNY LRVFG CYVH +++ KF +S C F+GY
Sbjct: 285 RTPTSLHNGLSPYEILHNSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFA 344
Query: 408 QKGFLCYDPNLRRIRVSRNVIFQENKY-FFASHHDLVSSPISILPLFYD 455
QKG+ +D + VSR+V+F+E+ + + A++ D VS+ S PL D
Sbjct: 345 QKGWKVFDMEKKEFLVSRDVVFREDVFPYAATNTDHVSA--SPAPLLVD 391
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.339 0.147 0.496
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,247,686
Number of Sequences: 26719
Number of extensions: 950862
Number of successful extensions: 3548
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 3090
Number of HSP's gapped (non-prelim): 221
length of query: 1019
length of database: 11,318,596
effective HSP length: 109
effective length of query: 910
effective length of database: 8,406,225
effective search space: 7649664750
effective search space used: 7649664750
T: 11
A: 40
X1: 15 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 39 (21.8 bits)
S2: 65 (29.6 bits)
Medicago: description of AC146527.6