BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145767.1 - phase: 0
(191 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14410 putative bHLH transcription factor (bHLH104) 198 2e-51
At3g23210 putative bHLH transcription factor (bHLH034) 160 3e-40
At5g54680 putative bHLH transcription factor (bHLH105) 144 4e-35
At1g51070 bHLH transcription factor (bHLH115) like protein 132 9e-32
At3g19860 putative bHLH transcription factor (bHLH121) 68 3e-12
At4g36060 transcription factor BHLH11 like protein 57 6e-09
At5g65770 nuclear matrix constituent protein 1 (NMCP1)-like 41 4e-04
At5g50780 putative protein 37 0.006
At4g17880 putative transcription factor BHLH4 35 0.019
At3g05130 hypothetical protein 35 0.024
At2g34730 putative myosin heavy chain 35 0.024
At5g48660 putative protein 35 0.032
At3g19370 unknown protein 35 0.032
At2g22760 putative bHLH transcription factor (bHLH019) 34 0.041
At5g59210 unknown protein 34 0.054
At5g28770 bZip transcription factor BZO2H3 / AtbZip63 34 0.054
At5g22800 alanyl-tRNA synthetase 34 0.054
At1g68790 putative nuclear matrix constituent protein 1 (NMCP1) 34 0.054
At4g38065 hypothetical protein 33 0.070
At5g26350 putative protein 33 0.092
>At4g14410 putative bHLH transcription factor (bHLH104)
Length = 283
Score = 198 bits (503), Expect = 2e-51
Identities = 100/138 (72%), Positives = 117/138 (84%), Gaps = 3/138 (2%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNE 113
RF DLS+VLEPGR +TDKPAILDDAIR+L+QL+ EA +L+E+N+KLLEEIK LKAEKNE
Sbjct: 149 RFMDLSSVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNE 208
Query: 114 LREEKLVLKADKEKIEKQLKSMPVSPAGFMPPPPMAAYQASVNKMAVYPNYGYIPMWHYL 173
LREEKLVLKADKEK E+QLKSM +GF+P P A + NKMAVYP+YGY+PMWHY+
Sbjct: 209 LREEKLVLKADKEKTEQQLKSMTAPSSGFIPHIPAA---FNHNKMAVYPSYGYMPMWHYM 265
Query: 174 PQSARDTSQDHELRPPAA 191
PQS RDTS+D ELRPPAA
Sbjct: 266 PQSVRDTSRDQELRPPAA 283
>At3g23210 putative bHLH transcription factor (bHLH034)
Length = 291
Score = 160 bits (406), Expect = 3e-40
Identities = 89/142 (62%), Positives = 109/142 (76%), Gaps = 6/142 (4%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNE 113
+F DLS+VLEPGR +TDK AILDDAIRV++QL+ EA EL+E+N+KLLEEIK LKA+KNE
Sbjct: 152 KFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNE 211
Query: 114 LREEKLVLKADKEKIEKQLKSMPVSPAGFMPPPPMAAYQASVNKMAVYPNYGY----IPM 169
LREEKLVLKA+KEK+E+QLKSM V GFMP AA+ + +KMAV YGY +PM
Sbjct: 212 LREEKLVLKAEKEKMEQQLKSMVVPSPGFMPSQHPAAFHS--HKMAVAYPYGYYPPNMPM 269
Query: 170 WHYLPQSARDTSQDHELRPPAA 191
W LP + RDTS+D + PP A
Sbjct: 270 WSPLPPADRDTSRDLKNLPPVA 291
>At5g54680 putative bHLH transcription factor (bHLH105)
Length = 234
Score = 144 bits (362), Expect = 4e-35
Identities = 75/145 (51%), Positives = 99/145 (67%), Gaps = 7/145 (4%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNE 113
+F +L A+LEPG P +TDK AIL DA+R+++QL+ EAQ+LK+SN L ++IK LK EKNE
Sbjct: 90 KFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKELKTEKNE 149
Query: 114 LREEKLVLKADKEKIEKQLKSMPVSPAGFMPPPPM-------AAYQASVNKMAVYPNYGY 166
LR+EK LK +KEK+E+QLK+M F P PPM A QA NKM +Y
Sbjct: 150 LRDEKQRLKTEKEKLEQQLKAMNAPQPSFFPAPPMMPTAFASAQGQAPGNKMVPIISYPG 209
Query: 167 IPMWHYLPQSARDTSQDHELRPPAA 191
+ MW ++P ++ DTSQDH LRPP A
Sbjct: 210 VAMWQFMPPASVDTSQDHVLRPPVA 234
>At1g51070 bHLH transcription factor (bHLH115) like protein
Length = 226
Score = 132 bits (333), Expect = 9e-32
Identities = 70/142 (49%), Positives = 99/142 (69%), Gaps = 4/142 (2%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNE 113
+F +LS+VLEPGR +TDK AI++DAIR+++Q + EAQ+LK+ N L E+IK LK EKNE
Sbjct: 85 KFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELKDEKNE 144
Query: 114 LREEKLVLKADKEKIEKQLKSMPVSPAG---FMP-PPPMAAYQASVNKMAVYPNYGYIPM 169
LR+EK LK +KE+I++QLK++ P F+P P ++ QA +K+ + Y M
Sbjct: 145 LRDEKQKLKVEKERIDQQLKAIKTQPQPQPCFLPNPQTLSQAQAPGSKLVPFTTYPGFAM 204
Query: 170 WHYLPQSARDTSQDHELRPPAA 191
W ++P +A DTSQDH LRPP A
Sbjct: 205 WQFMPPAAVDTSQDHVLRPPVA 226
>At3g19860 putative bHLH transcription factor (bHLH121)
Length = 284
Score = 67.8 bits (164), Expect = 3e-12
Identities = 52/145 (35%), Positives = 76/145 (51%), Gaps = 19/145 (13%)
Query: 55 FCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNEL 114
F +L VL+P RP + DK IL D +++L +L +E +LK L +E + L EKN+L
Sbjct: 25 FVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTALTDESRELTQEKNDL 83
Query: 115 REEKLVLKADKEKI----EKQLKSMPVSPAG-------FMPPPPMAAYQASVNKMAVYPN 163
REEK LK+D E + +++L+SM SP G M PPP Y + A+ P
Sbjct: 84 REEKTSLKSDIENLNLQYQQRLRSM--SPWGAAMDHTVMMAPPPSFPYPMPI---AMPP- 137
Query: 164 YGYIPMWHYLPQSARDTSQDHELRP 188
G IPM +P +Q+ + P
Sbjct: 138 -GSIPMHPSMPSYTYFGNQNPSMIP 161
>At4g36060 transcription factor BHLH11 like protein
Length = 286
Score = 57.0 bits (136), Expect = 6e-09
Identities = 31/78 (39%), Positives = 47/78 (59%), Gaps = 1/78 (1%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNE 113
+F +L L+P RP ++DK ++L D I++L + + LK E L +E + L EK+E
Sbjct: 63 QFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQESRELIQEKSE 121
Query: 114 LREEKLVLKADKEKIEKQ 131
LREEK LK+D E + Q
Sbjct: 122 LREEKATLKSDIEILNAQ 139
>At5g65770 nuclear matrix constituent protein 1 (NMCP1)-like
Length = 1042
Score = 40.8 bits (94), Expect = 4e-04
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 71 DKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEK 130
DK +D A + L LK+E EL KL EE+ L+A+K E+ E LK +K K E
Sbjct: 501 DKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEA 560
Query: 131 QLKSMPV 137
+ + + V
Sbjct: 561 EWEHIDV 567
Score = 31.2 bits (69), Expect = 0.35
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 81 RVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLK 122
R ++LK +ELK EKL + L+AE++E+R E LK
Sbjct: 725 REWAELKDSVEELKVQREKLETQRHMLRAERDEIRHEIEELK 766
Score = 28.5 bits (62), Expect = 2.3
Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
Query: 91 QELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQ 131
Q LKE EK LE ++ E L E+L +K D+E+ E++
Sbjct: 689 QSLKEMAEKELEHVQ---VELKRLDAERLEIKLDRERRERE 726
>At5g50780 putative protein
Length = 823
Score = 37.0 bits (84), Expect = 0.006
Identities = 25/80 (31%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Query: 64 PGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKA 123
PG+ KP R LSQL+ E EL+E +K E L+ + RE + L+A
Sbjct: 704 PGKSSELPKP---QSGPRTLSQLEQENNELRERLDKKEEVFLLLQKDLRRERELRKTLEA 760
Query: 124 DKEKIEKQLKSMPVSPAGFM 143
+ E ++ +LK M A +
Sbjct: 761 EVETLKNKLKEMDKEQASLI 780
>At4g17880 putative transcription factor BHLH4
Length = 589
Score = 35.4 bits (80), Expect = 0.019
Identities = 23/83 (27%), Positives = 45/83 (53%), Gaps = 6/83 (7%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAE--- 110
RF L AV+ + DK ++L DAI +S+LK++ Q+ + E+L ++I + E
Sbjct: 431 RFYSLRAVVP--NVSKMDKASLLGDAISYISELKSKLQKAESDKEELQKQIDVMNKEAGN 488
Query: 111 -KNELREEKLVLKADKEKIEKQL 132
K+ +++ K + + IE ++
Sbjct: 489 AKSSVKDRKCLNQESSVLIEMEV 511
>At3g05130 hypothetical protein
Length = 634
Score = 35.0 bits (79), Expect = 0.024
Identities = 26/87 (29%), Positives = 41/87 (46%), Gaps = 7/87 (8%)
Query: 53 CRFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAE-- 110
C+ LS L R + LD+ R LK E + ++ K LEE++ +K E
Sbjct: 425 CKVDQLSNALAQVELRREEADKALDEEKRNGEDLKAEVLKSEKMVAKTLEELEKVKIERK 484
Query: 111 -----KNELREEKLVLKADKEKIEKQL 132
KN+L + LK++ K+EK+L
Sbjct: 485 SLFSAKNDLESQSESLKSENVKLEKEL 511
Score = 30.0 bits (66), Expect = 0.78
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 91 QELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
+E K + L EIK L +EKNE+ K+ K E++E++L +
Sbjct: 246 EEKKNEIDGLKREIKVLLSEKNEMEIVKIEQKGVIEELERKLDKL 290
>At2g34730 putative myosin heavy chain
Length = 829
Score = 35.0 bits (79), Expect = 0.024
Identities = 29/92 (31%), Positives = 47/92 (50%), Gaps = 4/92 (4%)
Query: 48 IVIVCCRFCDLSAVLEPGRPVRTDK-PAILDDAIRVLSQLK---TEAQELKESNEKLLEE 103
I +V + DL + +E DK A+ + R L ++K T+ L+E E E
Sbjct: 608 IEVVSQQINDLQSQVERQETEIQDKIEALSVVSARELEKVKGYETKISSLREELELARES 667
Query: 104 IKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
+K +K EK + E+ KA+KE ++KQL S+
Sbjct: 668 LKEMKDEKRKTEEKLSETKAEKETLKKQLVSL 699
>At5g48660 putative protein
Length = 219
Score = 34.7 bits (78), Expect = 0.032
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 2/51 (3%)
Query: 83 LSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLK 133
L QL+ E ELKE EK +EIK L+ + + + E + KA+ E EK+ K
Sbjct: 129 LEQLQKERTELKEKEEKASKEIKQLQVKLSSITER--LKKAETESKEKEKK 177
>At3g19370 unknown protein
Length = 704
Score = 34.7 bits (78), Expect = 0.032
Identities = 16/62 (25%), Positives = 38/62 (60%)
Query: 76 LDDAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
L++++ + L+ E + L+E+ EK+ E++ K+ K +L + + +A+ + +K+L S+
Sbjct: 490 LEESVEKIRNLEAEMKTLRENKEKVEAEMETEKSMKEDLDTKLNITRANLNETQKKLSSL 549
Query: 136 PV 137
V
Sbjct: 550 EV 551
Score = 33.1 bits (74), Expect = 0.092
Identities = 19/45 (42%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 89 EAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLK 133
E QEL++ E+ +E+I+ L+AE LRE K ++A+ E EK +K
Sbjct: 482 EKQELRKKLEESVEKIRNLEAEMKTLRENKEKVEAEME-TEKSMK 525
>At2g22760 putative bHLH transcription factor (bHLH019)
Length = 295
Score = 34.3 bits (77), Expect = 0.041
Identities = 26/66 (39%), Positives = 37/66 (55%), Gaps = 4/66 (6%)
Query: 54 RFCDLSAVLEPGRPVRTDKPAILDDAIRVLSQLKTEAQELKESNE--KLLEEIKCLKAEK 111
+F LSA+L PG + DK ILDDAI + QL+ + + LKE E + +E + +K K
Sbjct: 134 KFIALSALL-PGLK-KADKVTILDDAISRMKQLQEQLRTLKEEKEATRQMESMILVKKSK 191
Query: 112 NELREE 117
EE
Sbjct: 192 VFFDEE 197
>At5g59210 unknown protein
Length = 434
Score = 33.9 bits (76), Expect = 0.054
Identities = 19/58 (32%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Query: 83 LSQLKTEAQELKESNEKLLEEIKCLKAEKNELRE--EKLVLKADKEKIEKQLKSMPVS 138
L++ +T L ++L ++I L + +E+ E +K+ DKEK+EKQL M V+
Sbjct: 219 LAEEQTRVASLMSEKQELEQKISVLSSRASEVSESGQKVFSVEDKEKLEKQLHDMAVA 276
>At5g28770 bZip transcription factor BZO2H3 / AtbZip63
Length = 307
Score = 33.9 bits (76), Expect = 0.054
Identities = 25/103 (24%), Positives = 46/103 (44%), Gaps = 21/103 (20%)
Query: 83 LSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSMPVSPAGF 142
LS+L+T+ +L+ N KL++ + + N+ E VLKA+ E + ++K
Sbjct: 169 LSELETQVSQLRVENSKLMKGLTDVTQTFNDASVENRVLKANIETLRAKVKMA------- 221
Query: 143 MPPPPMAAYQASVNKMAVYPNYGYIPMWHYLPQSARDTSQDHE 185
+ +V ++ G+ PM+H +PQ S E
Sbjct: 222 ---------EETVKRLT-----GFNPMFHNMPQIVSTVSLPSE 250
>At5g22800 alanyl-tRNA synthetase
Length = 954
Score = 33.9 bits (76), Expect = 0.054
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 81 RVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKA 123
R+ S LK +A+++ E LLEE++ + E ++LR + V KA
Sbjct: 784 RLCSTLKVKAEDVTNRVENLLEELRAARKEASDLRSKAAVYKA 826
>At1g68790 putative nuclear matrix constituent protein 1 (NMCP1)
Length = 1085
Score = 33.9 bits (76), Expect = 0.054
Identities = 16/53 (30%), Positives = 32/53 (60%)
Query: 86 LKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSMPVS 138
LK E ++L NE+LLE+ +CL+ K+E+ E + +I ++ +S+ ++
Sbjct: 438 LKAEEKKLHMENERLLEDKECLRKLKDEIEEIGTETTKQESRIREEHESLRIT 490
Score = 30.4 bits (67), Expect = 0.60
Identities = 16/49 (32%), Positives = 28/49 (56%)
Query: 87 KTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
K E E +L ++I +K E+ L +E+ LK DKE+ EK+ +++
Sbjct: 491 KEERVEFLRLQSELKQQIDKVKQEEELLLKEREELKQDKERFEKEWEAL 539
Score = 27.7 bits (60), Expect = 3.9
Identities = 14/58 (24%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 78 DAIRVLSQLKTE----AQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQ 131
+++R+ + + E ELK+ +K+ +E + L E+ EL+++K + + E ++K+
Sbjct: 485 ESLRITKEERVEFLRLQSELKQQIDKVKQEEELLLKEREELKQDKERFEKEWEALDKK 542
>At4g38065 hypothetical protein
Length = 1050
Score = 33.5 bits (75), Expect = 0.070
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 78 DAIRVLSQLKTEAQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
+A + ++L+T+ ELKE ++ E+++ +AEK EL +E L +K + + M
Sbjct: 929 EATKSRAELETKQTELKEVTTQMQEKLRTSEAEKTELVKEVASLSTEKRNLLSFISEM 986
>At5g26350 putative protein
Length = 126
Score = 33.1 bits (74), Expect = 0.092
Identities = 17/46 (36%), Positives = 28/46 (59%)
Query: 90 AQELKESNEKLLEEIKCLKAEKNELREEKLVLKADKEKIEKQLKSM 135
A E K E++K K EKN+L EEK L+ +K+++E++ K +
Sbjct: 36 ADEEKPFGSATNEDMKKHKEEKNKLEEEKKKLEKEKKQLEEEKKQL 81
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.321 0.136 0.405
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,376,057
Number of Sequences: 26719
Number of extensions: 181051
Number of successful extensions: 1751
Number of sequences better than 10.0: 197
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 91
Number of HSP's that attempted gapping in prelim test: 1412
Number of HSP's gapped (non-prelim): 414
length of query: 191
length of database: 11,318,596
effective HSP length: 94
effective length of query: 97
effective length of database: 8,807,010
effective search space: 854279970
effective search space used: 854279970
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Medicago: description of AC145767.1