BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145512.11 - phase: 0 
         (127 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At4g34770 unknown protein (At4g34770)                                  28  1.6
At5g63230 unknown protein                                              26  6.2
At5g57180 CIA2                                                         26  6.2
At4g25610 unknown protein                                              26  6.2
At1g77610 unknown protein                                              26  6.2
At1g52880 NAM-like protein                                             26  6.2
At1g21870 glucose 6 phosphate/phosphate translocator, putative         26  6.2

>At4g34770 unknown protein (At4g34770)
          Length = 104

 Score = 27.7 bits (60), Expect = 1.6
 Identities = 15/46 (32%), Positives = 23/46 (49%), Gaps = 4/46 (8%)

Query: 55  DTYHLHLFHMQVEYFNGNMDKALLENKWNHAEVDFGFPFMFSGIHV 100
           +TYH   F + + Y N  + + LL    N AE +FGF     G+ +
Sbjct: 46  ETYHRKRFVIPISYLNHPLFQGLL----NLAEEEFGFDHPMGGLTI 87


>At5g63230 unknown protein
          Length = 178

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 38  NTFFYTHGRKIDRCSRPDTYHLHLFHMQVEYFNGNMDKALLEN 80
           N ++++HGR  D CSR   + + + +   E    N+D A  +N
Sbjct: 76  NAYYHSHGRVEDACSR--QWCMAMPNATGEQLQANIDYACSQN 116


>At5g57180 CIA2
          Length = 435

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 10/38 (26%), Positives = 18/38 (47%)

Query: 71  GNMDKALLENKWNHAEVDFGFPFMFSGIHVLKEKSNMK 108
           G +++ ++ N WN +   F FP        L+E  + K
Sbjct: 218 GKLEQMMMINSWNRSSNGFNFPLGLGLRSALRENDDTK 255


>At4g25610 unknown protein
          Length = 586

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 22/77 (28%), Positives = 28/77 (35%), Gaps = 9/77 (11%)

Query: 47  KIDRCSRPDTYHLHLFHMQVEYFNGNMDKALLENKWNHAEVDFGFPFMFSGIHVLKEKSN 106
           K D+ S P T  +   H     FN +  KA L  +W  A          S  HV    S 
Sbjct: 494 KEDKRSNPTTPEVKNAHHISLQFNNHEAKAFLAKRWKEAT---------SAEHVTLVLSQ 544

Query: 107 MKDIRFTNPENDANIVL 123
             DI   N    +N V+
Sbjct: 545 ETDISGNNTHESSNGVI 561


>At1g77610 unknown protein
          Length = 336

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 77  LLENKWNHAEVDFGFPFMFSGIHVL 101
           ++ NKW   ++DF FP   S +H +
Sbjct: 24  IIMNKWIFQKLDFKFPLSVSCVHFI 48


>At1g52880 NAM-like protein
          Length = 320

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 11/45 (24%), Positives = 22/45 (48%)

Query: 52  SRPDTYHLHLFHMQVEYFNGNMDKALLENKWNHAEVDFGFPFMFS 96
           S    +H HL H+ ++  +   D  + ++++ H      FP +FS
Sbjct: 180 STASRHHHHLHHIHLDNDHHRHDMMIDDDRFRHVPPGLHFPAIFS 224


>At1g21870 glucose 6 phosphate/phosphate translocator, putative
          Length = 341

 Score = 25.8 bits (55), Expect = 6.2
 Identities = 9/25 (36%), Positives = 15/25 (60%)

Query: 77  LLENKWNHAEVDFGFPFMFSGIHVL 101
           ++ NKW   ++DF FP   S +H +
Sbjct: 30  IIMNKWIFQKLDFKFPLSVSCVHFI 54


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.326    0.140    0.463 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,194,760
Number of Sequences: 26719
Number of extensions: 131172
Number of successful extensions: 315
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 311
Number of HSP's gapped (non-prelim): 7
length of query: 127
length of database: 11,318,596
effective HSP length: 87
effective length of query: 40
effective length of database: 8,994,043
effective search space: 359761720
effective search space used: 359761720
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 54 (25.4 bits)