BLASTP 2.2.2 [Dec-14-2001]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= AC145331.13 + phase: 0 /partial
         (365 letters)

Database: ara_mips 
           26,719 sequences; 11,318,596 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

At2g19940 putative N-acetyl-gamma-glutamyl-phosphate reductase        547  e-156
At1g43880 hypothetical protein                                         30  2.7
At2g27880 Argonaute (AGO1)-like protein                                28  6.0
At4g34000 abscisic acid responsive elements-binding factor (ABRE...    28  7.9

>At2g19940 putative N-acetyl-gamma-glutamyl-phosphate reductase
          Length = 359

 Score =  547 bits (1409), Expect = e-156
 Identities = 262/345 (75%), Positives = 307/345 (88%)

Query: 21  QNNVRVGVLGASGYTGSEILRLLANHPQFGVALMTADRKAGQAISSVFPHLGTQDLPDLI 80
           + ++R+G+LGASGYTG+EI+RLLANHP F V LMTADRKAGQ++ SVFPHL  Q LP L+
Sbjct: 14  EKDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHLRAQKLPTLV 73

Query: 81  AIKDANFSDVDAVFCCLPHGTTQEIIKGLPKHLKIVDLSADFRLRDVSEYEEWYGQPHRA 140
           ++KDA+FS VDAVFCCLPHGTTQEIIK LP  LKIVDLSADFRLR+++EYEEWYGQPH+A
Sbjct: 74  SVKDADFSTVDAVFCCLPHGTTQEIIKELPTALKIVDLSADFRLRNIAEYEEWYGQPHKA 133

Query: 141 PDLQKEAIYGLTEVLREEIKNARLVANPGCYPTSIQLPLVPLIKANLIQTTNIIVDAKSG 200
            +LQKE +YGLTE+LRE+IK ARLVANPGCYPT+IQLPLVPL+KANLI+  NII+DAKSG
Sbjct: 134 VELQKEVVYGLTEILREDIKKARLVANPGCYPTTIQLPLVPLLKANLIKHENIIIDAKSG 193

Query: 201 VSGAGRSAKENLLFTEVTEGMSSYGVTRHRHAPEIEQGLADAAGSKVTISFTPHLIPMSR 260
           VSGAGR AKE  L++E+ EG+SSYGVTRHRH PEIEQGL+D A SKVT+SFTPHL+PM R
Sbjct: 194 VSGAGRGAKEANLYSEIAEGISSYGVTRHRHVPEIEQGLSDVAQSKVTVSFTPHLMPMIR 253

Query: 261 GMQSTIYVEMAPGVRIDDLRHQLQLSYEDEEFVVLLENGVIPRTHSVKGSNYCLFNVFPD 320
           GMQSTIYVEMAPGVR +DL  QL+ SYEDEEFV +L+ GV+PRTH+V+GSNYC  +VFPD
Sbjct: 254 GMQSTIYVEMAPGVRTEDLHQQLKTSYEDEEFVKVLDEGVVPRTHNVRGSNYCHMSVFPD 313

Query: 321 RIPGRAIIISVIDNLVKGASGQALQNLNLIMGFPENLGLQYLPLF 365
           RIPGRAIIISVIDNLVKGASGQALQNLN+++G+PE  GL + PLF
Sbjct: 314 RIPGRAIIISVIDNLVKGASGQALQNLNIMLGYPETTGLLHQPLF 358


>At1g43880 hypothetical protein
          Length = 409

 Score = 29.6 bits (65), Expect = 2.7
 Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 9/82 (10%)

Query: 188 IQTTNIIVDAKSGVSGAGRSAKENLLFTEVTEGMSSYGVTRHRHAPEIEQGLADAAGSKV 247
           +Q  N    A++G   A  +A +N+L        S+   T H   PE+  G + AAG  V
Sbjct: 8   VQRANAGALARAGDLSAAVTAAQNILAVS-----SASASTSHPSLPEVNTGTSAAAGQSV 62

Query: 248 TI----SFTPHLIPMSRGMQST 265
            I     F P  +  S G  S+
Sbjct: 63  NILVAQVFGPSAVVRSDGAPSS 84


>At2g27880 Argonaute (AGO1)-like protein
          Length = 997

 Score = 28.5 bits (62), Expect = 6.0
 Identities = 25/86 (29%), Positives = 39/86 (45%), Gaps = 7/86 (8%)

Query: 173 TSIQLPLVPLI-----KANLIQTTNIIVDAKSGVSGAGRSAKENLLFTEVTEGMSSYGVT 227
           T+ Q+P+   +     + N+   T  +  +   VS A  S+KE    TEV+E MS+  +T
Sbjct: 68  TATQVPVASAVSGGRGRGNIGDPTFSVASSSKTVSVAS-SSKEESKNTEVSETMSNLQIT 126

Query: 228 RHRHAPEIEQGLADAAGSKVTISFTP 253
                PE+   L  A+   VT    P
Sbjct: 127 STETKPEM-TSLPPASSKAVTFPVRP 151


>At4g34000 abscisic acid responsive elements-binding factor
           (ABRE/ABF3) / bZip transcription factor AtbZip37
          Length = 449

 Score = 28.1 bits (61), Expect = 7.9
 Identities = 19/52 (36%), Positives = 26/52 (49%), Gaps = 4/52 (7%)

Query: 45  NHPQFGVALMTADRKAGQAISSVFPHLGTQDLPDLI--AIKDANFSDVDAVF 94
           NHP     L   D K G  +++V P  G+Q  PDL   +  DA+ S V  +F
Sbjct: 309 NHPMNNNLLQAVDFKTGVTVAAVSP--GSQMSPDLTPKSALDASLSPVPYMF 358


  Database: ara_mips
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,978,382
  Number of sequences in database:  6832
  
  Database: /data/blast2/ara_mips_chr2
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,737,135
  Number of sequences in database:  4184
  
  Database: /data/blast2/ara_mips_chr3
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,236,886
  Number of sequences in database:  5377
  
  Database: /data/blast2/ara_mips_chr4
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 1,748,816
  Number of sequences in database:  4030
  
  Database: /data/blast2/ara_mips_chr5
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 2,569,679
  Number of sequences in database:  6098
  
  Database: /data/blast2/ara_mips_chl
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 25,951
  Number of sequences in database:  85
  
  Database: /data/blast2/ara_mips_mit
    Posted date:  Jul 15, 2004 10:29 AM
  Number of letters in database: 21,747
  Number of sequences in database:  113
  
Lambda     K      H
   0.319    0.138    0.398 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,813,423
Number of Sequences: 26719
Number of extensions: 324377
Number of successful extensions: 789
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 788
Number of HSP's gapped (non-prelim): 4
length of query: 365
length of database: 11,318,596
effective HSP length: 101
effective length of query: 264
effective length of database: 8,619,977
effective search space: 2275673928
effective search space used: 2275673928
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)