BLAST2 result
BLASTP 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= AC145330.14 - phase: 0
(1199 letters)
Database: ara_mips
26,719 sequences; 11,318,596 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g10990 putative retrotransposon polyprotein 517 e-146
At1g70010 hypothetical protein 510 e-144
At2g16000 putative retroelement pol polyprotein 506 e-143
At2g13940 putative retroelement pol polyprotein 504 e-142
At2g23330 putative retroelement pol polyprotein 500 e-141
At4g17450 retrotransposon like protein 498 e-140
At2g20460 putative retroelement pol polyprotein 493 e-139
At2g16670 putative retroelement pol polyprotein 491 e-139
At1g57640 489 e-138
At4g22040 LTR retrotransposon like protein 488 e-138
At2g24660 putative retroelement pol polyprotein 468 e-132
At4g23160 putative protein 457 e-128
At1g47650 hypothetical protein 456 e-128
At1g59265 polyprotein, putative 456 e-128
At1g58889 polyprotein, putative 454 e-127
At1g44510 polyprotein, putative 446 e-125
At4g02960 putative polyprotein of LTR transposon 444 e-124
At4g16870 retrotransposon like protein 438 e-122
At1g48710 hypothetical protein 436 e-122
At1g58140 hypothetical protein 436 e-122
>At4g10990 putative retrotransposon polyprotein
Length = 1203
Score = 517 bits (1332), Expect = e-146
Identities = 262/584 (44%), Positives = 391/584 (66%), Gaps = 18/584 (3%)
Query: 603 PILQPCQESE-PRNDPNHHPNPGKSSIPKCRGKSSSITTS-DDPDLHIPIAIRKPVRSCT 660
PI +P + ++ P +H N S+P S + +TS + P IP P + T
Sbjct: 445 PIARPKRNAKAPAYLSEYHCN----SVPFLSSLSPTTSTSIETPSSSIP-----PKKITT 495
Query: 661 KHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWK 720
+PM+ +SY L+ F ++ + PK +A+K KW A EE+ ALE+NKTW
Sbjct: 496 PYPMSTAISYDKLTPLFHSYICAYNVETEPKAFTQAMKSEKWTRAANEELHALEQNKTWI 555
Query: 721 IMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTV 780
+ +L GKN VGCKWVFT+KYN D ++ERYKARLVA+GFTQ GIDY ETF+PVAK +V
Sbjct: 556 VESLTEGKNVVGCKWVFTIKYNPDGSIERYKARLVAQGFTQQEGIDYMETFSPVAKFGSV 615
Query: 781 RVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLN-----VCKLQKSL 835
++LL LA W L Q+DV NAFL+G+L EE+YM P G+ G++ VC+L KSL
Sbjct: 616 KLLLGLAAATGWSLTQMDVSNAFLHGELDEEIYMSLPQGYTPPTGISLPSKPVCRLLKSL 675
Query: 836 YGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIV 895
YGLKQ+ R W+++ + ++Q+ +D+T+F++ S I +++VYVDD+++ +D
Sbjct: 676 YGLKQASRQWYKRLSSVFLGANFIQSPADNTMFVKVSCTS-IIVVLVYVDDLMIASNDSS 734
Query: 896 EMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPAD 955
++ LK+ L EF+IKDLG ++FLG+E+ARS +GI V QRKY +LLE+ G+SGC+P+
Sbjct: 735 AVENLKELLRSEFKIKDLGPARFFLGLEIARSSEGISVCQRKYAQNLLEDVGLSGCKPSS 794
Query: 956 TPMELNAKLW-EKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLE 1014
PM+ N L E G + + Y+ LVG+L+YL TRPDI F+V +SQF+ +P + H++
Sbjct: 795 IPMDPNLHLTKEMGTLLPNATSYRELVGRLLYLCITRPDITFAVHTLSQFLSAPTDIHMQ 854
Query: 1015 AVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWR 1074
A +++LRYLK NPG+GL + +++ ++ F+DADW R+S TG+C Y+ +L+TW+
Sbjct: 855 AAHKVLRYLKGNPGQGLMYSASSELCLNGFSDADWGTCKDSRRSVTGFCIYLGTSLITWK 914
Query: 1075 SKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNP 1134
SKKQ VV+RSS E+E+R++AQ CE++W+Q+LL++L + + P KLFCD+K+A+ +A NP
Sbjct: 915 SKKQSVVSRSSTESEYRSLAQATCEIIWLQQLLKDLHVTMTCPAKLFCDNKSALHLATNP 974
Query: 1135 VQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSL 1178
V H+RTKHIEID H ++++I +G + +V + Q ADILTK L
Sbjct: 975 VFHERTKHIEIDCHTVRDQIKAGKLKTLHVPTGNQLADILTKPL 1018
Score = 36.6 bits (83), Expect = 0.089
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 35/127 (27%)
Query: 401 NFPNTALVSVKPSPTWIIDSGATDHMTGESSLFASYSPCAGNHKIKIADGSLSAI--AGK 458
N ++L +V S WIIDSGA+ H+ + ++F +G + + +G+ AI G
Sbjct: 84 NHTLSSLQNVLSSDAWIIDSGASSHVCSDLTMFRELIHVSG-VTVTLPNGTRVAITHTGT 142
Query: 459 DC--------------------------------QANFFHSHCIFKDLNTGKMIGSAKKS 486
C A+FF C ++L G MIG K
Sbjct: 143 ICITSTLILHNVLLVPDFKFNLISVCCLVKTLSYSAHFFADCCYIQELTRGLMIGRGKTY 202
Query: 487 GGLYYLD 493
LY L+
Sbjct: 203 NNLYILE 209
>At1g70010 hypothetical protein
Length = 1315
Score = 510 bits (1314), Expect = e-144
Identities = 260/613 (42%), Positives = 399/613 (64%), Gaps = 23/613 (3%)
Query: 603 PILQPCQESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIRKP------- 655
P L P + ++ + +P+ SS+ S+ T++ P+ + + RK
Sbjct: 704 PDLNPTPPMQRQSSDHVNPSDSSSSVEIL---PSANPTNNVPEPSVQTSHRKAKKPAYLQ 760
Query: 656 ------VRSCTKHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEE 709
V S T H + KF+SY ++ + F + L + P N EA K+ W++A+ E
Sbjct: 761 DYYCHSVVSSTPHEIRKFLSYDRINDPYLTFLACLDKTKEPSNYTEAEKLQVWRDAMGAE 820
Query: 710 MRALEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSE 769
LE TW++ +LPA K +GC+W+F +KYNSD +VERYKARLVA+G+TQ GIDY+E
Sbjct: 821 FDFLEGTHTWEVCSLPADKRCIGCRWIFKIKYNSDGSVERYKARLVAQGYTQKEGIDYNE 880
Query: 770 TFAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLN-- 827
TF+PVAKLN+V++LL +A L QLD+ NAFLNGDL EE+YM P G+ + G +
Sbjct: 881 TFSPVAKLNSVKLLLGVAARFKLSLTQLDISNAFLNGDLDEEIYMRLPQGYASRQGDSLP 940
Query: 828 ---VCKLQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYV 884
VC+L+KSLYGLKQ+ R W+ KF+ ++ G++Q+ DHT F++ S DG ++VY+
Sbjct: 941 PNAVCRLKKSLYGLKQASRQWYLKFSSTLLGLGFIQSYCDHTCFLKIS-DGIFLCVLVYI 999
Query: 885 DDIILTGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLE 944
DDII+ ++ +D LK + F+++DLG LKYFLG+E+ RS KGI +SQRKY LDLL+
Sbjct: 1000 DDIIIASNNDAAVDILKSQMKSFFKLRDLGELKYFLGLEIVRSDKGIHISQRKYALDLLD 1059
Query: 945 ETGMSGCRPADTPMELNAKL-WEKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQ 1003
ETG GC+P+ PM+ + + G V++G Y+RL+G+L+YL TRPDI F+V+ ++Q
Sbjct: 1060 ETGQLGCKPSSIPMDPSMVFAHDSGGDFVEVGPYRRLIGRLMYLNITRPDITFAVNKLAQ 1119
Query: 1004 FMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYC 1063
F +P + HL+AVY+IL+Y+K G+GL++ T++ + ++ +AD+ R+ST+GYC
Sbjct: 1120 FSMAPRKAHLQAVYKILQYIKGTIGQGLFYSATSELQLKVYANADYNSCRDSRRSTSGYC 1179
Query: 1064 AYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCD 1123
++ +L+ W+S+KQ VV++SSAEAE+R+++ EL+W+ L+EL++ + P LFCD
Sbjct: 1180 MFLGDSLICWKSRKQDVVSKSSAEAEYRSLSVATDELVWLTNFLKELQVPLSKPTLLFCD 1239
Query: 1124 SKAAISIAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNF 1183
++AAI IA+N V H+RTKHIE D H ++E+++ G L ++ + Q AD TK L +F
Sbjct: 1240 NEAAIHIANNHVFHERTKHIESDCHSVRERLLKGLFELYHINTELQIADPFTKPLYPSHF 1299
Query: 1184 ERLIVKLGMTNIY 1196
RLI K+G+ NI+
Sbjct: 1300 HRLISKMGLLNIF 1312
Score = 151 bits (381), Expect = 2e-36
Identities = 112/402 (27%), Positives = 185/402 (45%), Gaps = 48/402 (11%)
Query: 117 LDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTMESTIKKPYMFLPTAKNVW 176
++ K KLGF+ G I P DP + W+ NS + +WLL+++ I ++ PTA +W
Sbjct: 5 IEAKNKLGFVDGSIPKPDDDDPYCKIWRRCNSMVKSWLLNSVSKEIYTSILYFPTAAAIW 64
Query: 177 DAVKATYSDIQNSS--RIFDLKSRLWQAKQSDRDVTTYYNELMALWQELDLCYDDNWRCT 234
K Y+ SS R++ L+ ++ +Q + D+++Y+ LW+EL R
Sbjct: 65 ---KDLYTRFHKSSLPRLYKLRQQIHSLRQGNLDLSSYHTRTQTLWEEL-TSLQAVPRTV 120
Query: 235 EDSVLFLKRQENDRVFVLLAGLNNCLDEVRGRILGRIPLPTLQETFSEVRREEARQSVMM 294
ED L +E +RV L GLN+C D VR +IL + LP+L E F+ + ++E ++S +
Sbjct: 121 ED---LLIERETNRVIDFLMGLNDCYDTVRSQILMKKTLPSLSEVFNMIDQDETQRSARI 177
Query: 295 GKSASITESSALVTKGNEEGKRDG------KKPFCDHCNRQWHTRDTCWKLHGKPPNWKK 348
+ +T S V+ + + +G ++P C +C+R H DTC+K HG P ++K
Sbjct: 178 STTPGMTSSVFPVSNQSSQSALNGDTYQKKERPVCSYCSRPGHVEDTCYKKHGYPTSFKS 237
Query: 349 KGG--KEGRALQATTSDQE--HQSSSSSFPFTKEQLDQLYKMFGS--QTPSCSIAQIGNF 402
K K + A +E + +S S+ T Q+ QL S Q PS +
Sbjct: 238 KQKFVKPSISANAAIGSEEVVNNTSVSTGDLTTSQIQQLVSFLSSKLQPPSTPVQ----- 292
Query: 403 PNTALVSVKPSPTWIIDSGATDHMTGESSLFASYSPCAGNHKI----------KIADGSL 452
P +SV P+ S ++G L G H I K S+
Sbjct: 293 PEVHSISVSSDPS---SSSTVCPISGSVHL--------GRHLILNDVLFIPQFKFNLLSV 341
Query: 453 SAIA-GKDCQANFFHSHCIFKDLNTGKMIGSAKKSGGLYYLD 493
S++ C+ F + C+ +D M+G K+ LY +D
Sbjct: 342 SSLTKSMGCRIWFDETSCVLQDATRELMVGMGKQVANLYIVD 383
>At2g16000 putative retroelement pol polyprotein
Length = 1454
Score = 506 bits (1303), Expect = e-143
Identities = 260/589 (44%), Positives = 387/589 (65%), Gaps = 9/589 (1%)
Query: 615 NDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIRKPVRSCTKHPMAKFVSYSNLS 674
+D H P+ S I + SS P H+ ++S K+P++ +SYS +S
Sbjct: 866 SDTTHSPSSLPSQISDLPPQISSQRVRKPP-AHLNDYHCNTMQSDHKYPISSTISYSKIS 924
Query: 675 SSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMTLPAGKNTVGCK 734
S + + ++ + IP N EA +W EAV E+ A+EK TW+I TLP GK VGCK
Sbjct: 925 PSHMCYINNITKIPIPTNYAEAQDTKEWCEAVDAEIGAMEKTNTWEITTLPKGKKAVGCK 984
Query: 735 WVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVRVLLSLAVNLDWPL 794
WVFT+K+ +D +ERYKARLVAKG+TQ G+DY++TF+PVAK+ T+++LL ++ + W L
Sbjct: 985 WVFTLKFLADGNLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKVSASKKWFL 1044
Query: 795 NQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGL-----NVCKLQKSLYGLKQSPRAWFEKF 849
QLDV NAFLNG+L+EE++M P G+ ++ G+ V +L++S+YGLKQ+ R WF+KF
Sbjct: 1045 KQLDVSNAFLNGELEEEIFMKIPEGYAERKGIVLPSNVVLRLKRSIYGLKQASRQWFKKF 1104
Query: 850 TWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLKKNLAKEFE 909
+ S+ G+ + DHTLF++ DG+ I++VYVDDI++ +L + L + F+
Sbjct: 1105 SSSLLSLGFKKTHGDHTLFLKM-YDGEFVIVLVYVDDIVIASTSEAAAAQLTEELDQRFK 1163
Query: 910 IKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELNAKL-WEKG 968
++DLG LKYFLG+EVAR+ GI + QRKY L+LL+ TGM C+P PM N K+ + G
Sbjct: 1164 LRDLGDLKYFLGLEVARTTAGISICQRKYALELLQSTGMLACKPVSVPMIPNLKMRKDDG 1223
Query: 969 NVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPG 1028
++ DI +Y+R+VGKL+YL TRPDI F+V+ + QF +P HL A YR+L+Y+K G
Sbjct: 1224 DLIEDIEQYRRIVGKLMYLTITRPDITFAVNKLCQFSSAPRTTHLTAAYRVLQYIKGTVG 1283
Query: 1029 KGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEA 1088
+GL++ ++D + F D+DWA R+STT + +V +L++WRSKKQ V+RSSAEA
Sbjct: 1284 QGLFYSASSDLTLKGFADSDWASCQDSRRSTTSFTMFVGDSLISWRSKKQHTVSRSSAEA 1343
Query: 1089 EFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRTKHIEIDRH 1148
E+RA+A CE++W+ LL L+ +P+ L+ DS AAI IA NPV H+RTKHI++D H
Sbjct: 1344 EYRALALATCEMVWLFTLLVSLQASPPVPI-LYSDSTAAIYIATNPVFHERTKHIKLDCH 1402
Query: 1149 FIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNIYA 1197
++E++ +G + L +V + +Q ADILTK L FE L K+ + NI++
Sbjct: 1403 TVRERLDNGELKLLHVRTEDQVADILTKPLFPYQFEHLKSKMSILNIFS 1451
Score = 158 bits (399), Expect = 2e-38
Identities = 130/473 (27%), Positives = 211/473 (44%), Gaps = 84/473 (17%)
Query: 100 RLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTME 159
RLD NY +WS + + LD K K GFI G + P +D N+R W NS + +WLL+++
Sbjct: 78 RLDETNYGDWSVAMLISLDAKNKTGFIDGTLSRPLESDLNFRLWSRCNSMVKSWLLNSVS 137
Query: 160 STIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMAL 219
I + + + A ++W + + + ++ N R ++L + +Q ++ YY L L
Sbjct: 138 PQIYRSILRMNDASDIWRDLNSRF-NVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTL 196
Query: 220 WQELDLCYDDNWRCTEDSVLFLKRQ-ENDRVFVLLAGLNNCLDEVRGRILGRIPLPTLQE 278
W +LD + CT + L+++ E ++ LAGLN VR +I+ + LP+L E
Sbjct: 197 WDQLDSTEALDEPCTCGKAMRLQQKAEQAKIVKFLAGLNESYAIVRRQIIAKKALPSLGE 256
Query: 279 TFSEVRREEARQSVM-------------MGKSASITESSALVTKGNEEGKRDGKKPFCDH 325
+ + ++ ++QS + +S S+ + V G +G +P C
Sbjct: 257 VYHILDQDNSQQSFSNVVAPPAAFQVSEITQSPSMDPTVCYVQNGPNKG-----RPICSF 311
Query: 326 CNRQWHTRDTCWKLHGKPPNWKKKGGKEGRALQ---------ATTSDQEHQSSSSSFPFT 376
NR H + C+K HG PP + K GK G LQ A +S+ S +
Sbjct: 312 YNRVGHIAERCYKKHGFPPGFTPK-GKAGEKLQKPKPLAANVAESSEVNTSLESMVGNLS 370
Query: 377 KEQLDQLYKMFGSQ---TP-----SCSIAQIGNF-----PNT----ALVSVK----PSPT 415
KEQL Q MF SQ TP + S +Q N P+T +++V S T
Sbjct: 371 KEQLQQFIAMFSSQLQNTPPSTYATASTSQSDNLGICFSPSTYSFIGILTVARHTLSSAT 430
Query: 416 WIIDSGATDHMTGESSLFASYS---------------PCAGNHKIKIADG---------- 450
W+IDSGAT H++ + SLF+S +G +K+ D
Sbjct: 431 WVIDSGATHHVSHDRSLFSSLDTSVLSAVNLPTGPTVKISGVGTLKLNDDILLKNVLFIP 490
Query: 451 -------SLSAIAGK-DCQANFFHSHCIFKDLNTGKMIGSAKKSGGLYYLDNG 495
S+S++ + F + C +DL G+M+G ++ LY LD G
Sbjct: 491 EFRLNLISISSLTDDIGSRVIFDKNSCEIQDLIKGRMLGQGRRVANLYLLDVG 543
>At2g13940 putative retroelement pol polyprotein
Length = 1501
Score = 504 bits (1297), Expect = e-142
Identities = 251/538 (46%), Positives = 365/538 (67%), Gaps = 2/538 (0%)
Query: 663 PMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIM 722
P+ +VS + SSS A+ + ++ PK+ +EA++I W +A+ E+ ALE NKTW I+
Sbjct: 965 PLTDYVSDAAFSSSHRAYLAAITDNVEPKHFKEAVQIKVWNDAMFTEVDALEINKTWDIV 1024
Query: 723 TLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVRV 782
LP GK +G +WVF KYNSD TVERYKARLV +G Q G DY ETFAPV ++ TVR
Sbjct: 1025 DLPPGKVAIGSQWVFKTKYNSDGTVERYKARLVVQGNKQVEGEDYKETFAPVVRMTTVRT 1084
Query: 783 LLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLNVCKLQKSLYGLKQSP 842
LL W + Q+DV NAFL+GDL+EEVYM PPGF VC+L+KSLYGLKQ+P
Sbjct: 1085 LLRNVAANQWEVYQMDVHNAFLHGDLEEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQAP 1144
Query: 843 RAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLKK 902
R WF+K + S+ + G++Q+ D++LF N+ ++ +LI YVDD+++ G+D + + K
Sbjct: 1145 RCWFKKLSDSLLRFGFVQSYEDYSLFSYTRNNIELRVLI-YVDDLLICGNDGYMLQKFKD 1203
Query: 903 NLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELNA 962
L++ F +KDLG LKYFLG+EV+R +GI +SQRKY LD++ ++G G RPA TP+E N
Sbjct: 1204 YLSRCFSMKDLGKLKYFLGIEVSRGPEGIFLSQRKYALDVIADSGNLGSRPAHTPLEQNH 1263
Query: 963 KLW-EKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRILR 1021
L + G + D Y+RLVG+L+YL HTRP++++SV V++QFM +P E H +A R++R
Sbjct: 1264 HLASDDGPLLSDPKPYRRLVGRLLYLLHTRPELSYSVHVLAQFMQNPREAHFDAALRVVR 1323
Query: 1022 YLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVV 1081
YLK +PG+G+ D + ++ D+DW + R+S + Y + G+ ++W++KKQ V
Sbjct: 1324 YLKGSPGQGILLNADPDLTLEVYCDSDWQSCPLTRRSISAYVVLLGGSPISWKTKKQDTV 1383
Query: 1082 ARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRTK 1141
+ SSAEAE+RAM+ + E+ W++KLL+EL ++ P +L+CDSKAAI IA NPV H+RTK
Sbjct: 1384 SHSSAEAEYRAMSYALKEIKWLRKLLKELGIEQSTPARLYCDSKAAIHIAANPVFHERTK 1443
Query: 1142 HIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNIYAPT 1199
HIE D H +++ + G I +V + EQ AD+ TK+L R F L+ KLG+ N++ PT
Sbjct: 1444 HIESDCHSVRDAVRDGIITTQHVRTTEQLADVFTKALGRNQFLYLMSKLGVQNLHTPT 1501
Score = 139 bits (350), Expect = 1e-32
Identities = 118/467 (25%), Positives = 193/467 (41%), Gaps = 80/467 (17%)
Query: 101 LDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTMES 160
L+G NY +W+ + L K K GFI G I P DPNY W + NS I+ W+ +++E
Sbjct: 49 LNGDNYNQWATEMLNALQAKRKTGFINGTIPRPPPNDPNYENWTAVNSMIVGWIRTSIEP 108
Query: 161 TIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMALW 220
+K F+ A +W +K +S + N RI ++++L +Q + V YY L LW
Sbjct: 109 KVKATVTFISDAHLLWKDLKQRFS-VGNKVRIHQIRAQLSSCRQDGQAVIEYYGRLSNLW 167
Query: 221 QELDL------CYDDNWRCTEDSVLFLKRQENDRVFVLLAGLNNC-LDEVRGRILGRIPL 273
+E ++ C RC S K +E +++ + GL+ + ++ PL
Sbjct: 168 EEYNIYKPVTVCTCGLCRCGATSEP-TKEREEEKIHQFVLGLDESRFGGLCATLINMDPL 226
Query: 274 PTLQETFSEVRREEARQS---VMMGKSASI-----------------TESSALVTKGNEE 313
P+L E +S V REE R + V K ++ + S + T G+
Sbjct: 227 PSLGEIYSRVIREEQRLASVHVREQKEEAVGFLARREQLDHHSRVDASSSRSEHTGGSRS 286
Query: 314 GKRDGKKPFCDHCNRQWHTRDTCWKLHGKPPNWKK--------------KGGKEGRALQA 359
+ C +C R H + CW++ G P W + +G GR
Sbjct: 287 NSIIKGRVTCSNCGRTGHEKKECWQIVGFPDWWSERNGGRGSNGRGRGGRGSNGGRGQGQ 346
Query: 360 TTSDQEHQSSSSSFP-FTKEQLDQLYKMFGSQTPSCSIAQIGNFPNTALVSVKPSPTWII 418
+ S+SS FP FT+E + L ++ ++ S S + N + L I+
Sbjct: 347 VMAAHATSSNSSVFPEFTEEHMRVLSQLVKEKSNSGSTS---NNNSDRLSGKTKLGDIIL 403
Query: 419 DSGATDHMTGESSLFASYSP--------CAGNHKIKIADGSLS----------------- 453
DSGA+ HMTG S + P G+ ++ G L+
Sbjct: 404 DSGASHHMTGTLSSLTNVVPVPPCPVGFADGSKAFALSVGVLTLSNTVSLTNVLFVPSLN 463
Query: 454 --------AIAGKDCQANFFHSHCIFKDLNTGKMIGSAKKSGGLYYL 492
+ C A F + C +D ++ +IGS ++ GG+YYL
Sbjct: 464 CTLISVSKLLKQTQCLATFTDTLCFLQDRSSKTLIGSGEERGGVYYL 510
>At2g23330 putative retroelement pol polyprotein
Length = 1496
Score = 500 bits (1288), Expect = e-141
Identities = 249/541 (46%), Positives = 370/541 (68%), Gaps = 3/541 (0%)
Query: 660 TKHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTW 719
T +P++ F++ S S++ AF + + PK+ ++A+ I +W EA+ +E+ ALE N TW
Sbjct: 957 TLYPLSDFLTNSGYSANHIAFMAAILDSNEPKHFKDAILIKEWCEAMSKEIDALEANHTW 1016
Query: 720 KIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNT 779
I LP GK + KWV+ +KYNSD T+ER+KARLV G Q G+D+ ETFAPVAKL T
Sbjct: 1017 DITDLPHGKKAISSKWVYKLKYNSDGTLERHKARLVVMGNHQKEGVDFKETFAPVAKLTT 1076
Query: 780 VRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLNVCKLQKSLYGLK 839
VR +L++A DW ++Q+DV NAFL+GDL+EEVYM PPGF+ VC+L+KSLYGLK
Sbjct: 1077 VRTILAVAAAKDWEVHQMDVHNAFLHGDLEEEVYMRLPPGFKCSDPSKVCRLRKSLYGLK 1136
Query: 840 QSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDR 899
Q+PR WF K + +++ G+ Q+ D++LF N I ++VYVDD+I+ G+++ +DR
Sbjct: 1137 QAPRCWFSKLSTALRNIGFTQSYEDYSLF-SLKNGDTIIHVLVYVDDLIVAGNNLDAIDR 1195
Query: 900 LKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPME 959
K L K F +KDLG LKYFLG+EV+R G +SQRKY LD+++ETG+ GC+P+ P+
Sbjct: 1196 FKSQLHKCFHMKDLGKLKYFLGLEVSRGPDGFCLSQRKYALDIVKETGLLGCKPSAVPIA 1255
Query: 960 LNAKLWE-KGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYR 1018
LN KL G V + +Y+RLVG+ IYL TRPD++++V ++SQFM +P H EA R
Sbjct: 1256 LNHKLASITGPVFTNPEQYRRLVGRFIYLTITRPDLSYAVHILSQFMQAPLVAHWEAALR 1315
Query: 1019 ILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQ 1078
++RYLK +P +G++ + + ++ + D+D+ + R+S + Y Y+ + ++W++KKQ
Sbjct: 1316 LVRYLKGSPAQGIFLRSDSSLIINAYCDSDYNACPLTRRSLSAYVVYLGDSPISWKTKKQ 1375
Query: 1079 GVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHD 1138
V+ SSAEAE+RAMA + EL W++ LL++L + P+KL CDS+AAI IA NPV H+
Sbjct: 1376 DTVSYSSAEAEYRAMAYTLKELKWLKALLKDLGVHHSSPMKLHCDSEAAIHIAANPVFHE 1435
Query: 1139 RTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNIYAP 1198
RTKHIE D H +++ ++ I ++ + +Q AD+LTKSL RP FERL+ LG+T+ Y P
Sbjct: 1436 RTKHIESDCHKVRDAVLDKLITTEHIYTEDQVADLLTKSLPRPTFERLLSTLGVTD-YVP 1494
Query: 1199 T 1199
+
Sbjct: 1495 S 1495
Score = 151 bits (382), Expect = 2e-36
Identities = 107/360 (29%), Positives = 164/360 (44%), Gaps = 39/360 (10%)
Query: 101 LDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTMES 160
L NY EWS+ ++ L K KLGFI G I P+ DP W + NS I+ W+ ++++
Sbjct: 39 LKENNYAEWSEELQNFLRAKQKLGFIDGSIPKPAA-DPELSLWIAINSMIVGWIRTSIDP 97
Query: 161 TIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMALW 220
TI+ F+ A +W+ ++ +S + N R LK + Q + V YY L+ LW
Sbjct: 98 TIRSTVGFVSEASQLWENLRRRFS-VGNGVRKTLLKDEIAACTQDGQPVLAYYGRLIKLW 156
Query: 221 QELDLCYDDNWRCTEDSVLFL-KRQENDRVFVLLAGLNNCLDEVRGRILGRIPLPTLQET 279
+EL Y C ++ + K +E+DRV L GL++ +R I PLP L +
Sbjct: 157 EELQN-YKSGRECKCEAASDIEKEREDDRVHKFLLGLDSRFSSIRSSITDIEPLPDLYQV 215
Query: 280 FSEVRREEARQSVMMGKSASITESSALVTKGNEEGK-RDGKKPFCDHCNRQWHTRDTCWK 338
+S V REE + K TE+ + + + RD FC HCNR+ H C+
Sbjct: 216 YSRVVREEQNLNASRTKDVVKTEAIGFSVQSSTTPRFRDKSTLFCTHCNRKGHEVTQCFL 275
Query: 339 LHGKPPNWKKKGGKE------GRALQATTSDQEHQSSSSSFPFTK--------------- 377
+HG P W ++ +E GR S + SS P T+
Sbjct: 276 VHGYPDWWLEQNPQENQPSTRGRGSNGRGSSSGRGGNRSSAPTTRGRGRANNAQAAAPTV 335
Query: 378 -----EQLDQLYKMFGSQTPSCSIAQIGNFPNTALVSVKPSPTWIIDSGATDHMTGESSL 432
+Q+ QL + +Q PS S ++ NT L +ID+GA+ HMTG+ S+
Sbjct: 336 SGDGNDQIAQLISLLQAQRPSSSSERLSG--NTCLTD------GVIDTGASHHMTGDCSI 387
>At4g17450 retrotransposon like protein
Length = 1433
Score = 498 bits (1281), Expect = e-140
Identities = 241/544 (44%), Positives = 366/544 (66%), Gaps = 8/544 (1%)
Query: 661 KHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWK 720
KH + F Y+N + F AF + ++ IP+ EA W +A+ EE+ A+ + TW
Sbjct: 889 KH-LQDFHCYNNTTEPFHAFINNITNAVIPQRYSEAKDFKAWCDAMKEEIGAMVRTNTWS 947
Query: 721 IMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTV 780
+++LP K +GCKWVFT+K+N+D ++ERYKARLVAKG+TQ G+DY ETF+PVAKL +V
Sbjct: 948 VVSLPPNKKAIGCKWVFTIKHNADGSIERYKARLVAKGYTQEEGLDYEETFSPVAKLTSV 1007
Query: 781 RVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLN-----VCKLQKSL 835
R++L LA + W ++QLD+ NAFLNGDL EE+YM PPG+ D G +C+L KS+
Sbjct: 1008 RMMLLLAAKMKWSVHQLDISNAFLNGDLDEEIYMKIPPGYADLVGEALPPHAICRLHKSI 1067
Query: 836 YGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIV 895
YGLKQ+ R W+ K + ++K G+ ++ +DHTLF++++N G + ++VYVDDI++ +
Sbjct: 1068 YGLKQASRQWYLKLSNTLKGMGFQKSNADHTLFIKYAN-GVLMGVLVYVDDIMIVSNSDD 1126
Query: 896 EMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPAD 955
+ + L F+++DLGA KYFLG+E+ARS KGI + QRKYIL+LL TG G +P+
Sbjct: 1127 AVAQFTAELKSYFKLRDLGAAKYFLGIEIARSEKGISICQRKYILELLSTTGFLGSKPSS 1186
Query: 956 TPMELNAKLWEKGNVPV-DIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLE 1014
P++ + KL ++ VP+ D Y++LVGKL+YL TRPDIA++V+ + QF H+P HL
Sbjct: 1187 IPLDPSVKLNKEDGVPLTDSTSYRKLVGKLMYLQITRPDIAYAVNTLCQFSHAPTSVHLS 1246
Query: 1015 AVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWR 1074
AV+++LRYLK G+GL++ + D+ +TD+D+ R+ YC ++ LV+W+
Sbjct: 1247 AVHKVLRYLKGTVGQGLFYSADDKFDLRGYTDSDFGSCTDSRRCVAAYCMFIGDYLVSWK 1306
Query: 1075 SKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNP 1134
SKKQ V+ S+AEAEFRAM+QG E++W+ +L ++ K+ P L+CD+ AA+ I +N
Sbjct: 1307 SKKQDTVSMSTAEAEFRAMSQGTKEMIWLSRLFDDFKVPFIPPAYLYCDNTAALHIVNNS 1366
Query: 1135 VQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTN 1194
V H+RTK +E+D + +E + SG + +V + EQ AD LTK++ F +LI K+G+ N
Sbjct: 1367 VFHERTKFVELDCYKTREAVESGFLKTMFVETGEQVADPLTKAIHPAQFHKLIGKMGVCN 1426
Query: 1195 IYAP 1198
I+AP
Sbjct: 1427 IFAP 1430
Score = 138 bits (347), Expect = 2e-32
Identities = 115/452 (25%), Positives = 189/452 (41%), Gaps = 75/452 (16%)
Query: 101 LDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTMES 160
LDG NY WS +R+ LD K KL F+ G + P +D ++ W NS + WLL+ +
Sbjct: 85 LDGTNYNNWSIAMRMSLDAKNKLSFVDGSLPRPDVSDRMFKIWSRCNSMVKTWLLNVVTE 144
Query: 161 TIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMALW 220
+W+ + + + + N R + L+ + KQ + D++TYY + LW
Sbjct: 145 --------------MWNDLFSRFR-VSNLPRKYQLEQSIHTLKQGNLDLSTYYTKKKTLW 189
Query: 221 QELDLCYDDNWR-CTEDSVL-FLKRQENDRVFVLLAGLNNCLDEVRGRILGRIPLPTLQE 278
++L R C + V L+ E R+ L GLN+ +RG+IL P P L E
Sbjct: 190 EQLANTRVLTVRKCNCEHVKELLEEAETSRIIQFLMGLNDNFAHIRGQILNMKPRPGLTE 249
Query: 279 TFSEVRREEARQSV----MMGKSASI-TESSALVTKGNEEGKRDGKKPFCDHCNRQWHTR 333
++ + ++E+++ V + +A+ ++S ++ + KKP C +CN+ H
Sbjct: 250 IYNMLDQDESQRLVGNPTLSNPTAAFQVQASPIIDSQVNMAQGSYKKPKCSYCNKLGHLV 309
Query: 334 DTCWKLHGKPPNWK-KKGGKEGRALQATTSDQEHQSSSSSFPFTKEQL--DQLYKMFGSQ 390
D C+K HG PP K KG G A+T Q + + + E+ DQ+ M
Sbjct: 310 DKCYKKHGYPPGSKWTKGQTIGSTNLASTQLQPVNETPNEKTDSYEEFSTDQIQTMISYL 369
Query: 391 TPSCSIAQIGNFPNTALVSVKPSPT----------------------------------- 415
+ IA P T+ S+ SP+
Sbjct: 370 STKLHIASASPMPTTSSASISASPSVPMISQISGTFLSLFSNAYYDMLISSVSQEPAVSP 429
Query: 416 --WIIDSGATDHMTGESSLFASYSPCAGNHKIKIADGSLSAIAG----KDCQANFFHS-- 467
W+IDSGAT H+T L+ ++ N +++ + IAG + A H+
Sbjct: 430 RGWVIDSGATHHVTHNRDLYLNFRSLE-NTFVRLPNDCTVKIAGIGFIQLSDAISLHNVL 488
Query: 468 ------HCIFKDLNTGKMIGSAKKSGGLYYLD 493
+ +L MIG + G LY LD
Sbjct: 489 YIPEFKFNLISELTKELMIGRGSQVGNLYVLD 520
>At2g20460 putative retroelement pol polyprotein
Length = 1461
Score = 493 bits (1269), Expect = e-139
Identities = 250/541 (46%), Positives = 365/541 (67%), Gaps = 8/541 (1%)
Query: 662 HPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKI 721
HP++ +SYS +S S + + +S + IP++ EA +W A+ +E+ A+E+ TW+I
Sbjct: 919 HPISSSLSYSQISPSHMLYINNISKIPIPQSYHEAKDSKEWCGAIDQEIGAMERTDTWEI 978
Query: 722 MTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVR 781
+LP GK VGCKWVFTVK+++D ++ER+KAR+VAKG+TQ G+DY+ETF+PVAK+ TV+
Sbjct: 979 TSLPPGKKAVGCKWVFTVKFHADGSLERFKARIVAKGYTQKEGLDYTETFSPVAKMATVK 1038
Query: 782 VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLN-----VCKLQKSLY 836
+LL ++ + W LNQLD+ NAFLNGDL+E +YM P G+ D G + VC+L+KS+Y
Sbjct: 1039 LLLKVSASKKWYLNQLDISNAFLNGDLEETIYMKLPDGYADIKGTSLPPNVVCRLKKSIY 1098
Query: 837 GLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVE 896
GLKQ+ R WF KF+ S+ G+ + DHTLF+R + +L+VYVDDI++
Sbjct: 1099 GLKQASRQWFLKFSNSLLALGFEKQHGDHTLFVRCIG-SEFIVLLVYVDDIVIASTTEQA 1157
Query: 897 MDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADT 956
L + L F++++LG LKYFLG+EVAR+ +GI +SQRKY L+LL M C+P+
Sbjct: 1158 AQSLTEALKASFKLRELGPLKYFLGLEVARTSEGISLSQRKYALELLTSADMLDCKPSSI 1217
Query: 957 PMELNAKLWEK-GNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEA 1015
PM N +L + G + D Y+RLVGKL+YL TRPDI F+V+ + QF +P HL A
Sbjct: 1218 PMTPNIRLSKNDGLLLEDKEMYRRLVGKLMYLTITRPDITFAVNKLCQFSSAPRTAHLAA 1277
Query: 1016 VYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRS 1075
VY++L+Y+K G+GL++ +D + +TDADW R+STTG+ +V +L++WRS
Sbjct: 1278 VYKVLQYIKGTVGQGLFYSAEDDLTLKGYTDADWGTCPDSRRSTTGFTMFVGSSLISWRS 1337
Query: 1076 KKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPV 1135
KKQ V+RSSAEAE+RA+A CE+ W+ LL L++ +P+ L+ DS AA+ IA NPV
Sbjct: 1338 KKQPTVSRSSAEAEYRALALASCEMAWLSTLLLALRVHSGVPI-LYSDSTAAVYIATNPV 1396
Query: 1136 QHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNI 1195
H+RTKHIEID H ++EK+ +G + L +V + +Q ADILTK L F L+ K+ + NI
Sbjct: 1397 FHERTKHIEIDCHTVREKLDNGQLKLLHVKTKDQVADILTKPLFPYQFAHLLSKMSIQNI 1456
Query: 1196 Y 1196
+
Sbjct: 1457 F 1457
Score = 149 bits (377), Expect = 7e-36
Identities = 128/476 (26%), Positives = 208/476 (42%), Gaps = 87/476 (18%)
Query: 100 RLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTME 159
RLD Y +WS +R+ LD K KLGF+ G + P +DPN+R W NS + +WLL+++
Sbjct: 82 RLDETTYGDWSVAMRISLDAKNKLGFVDGSLPRPLESDPNFRLWSRCNSMVKSWLLNSVS 141
Query: 160 STIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMAL 219
I + + L A ++W + + ++ N R ++L + +Q ++ YY L L
Sbjct: 142 PQIYRSILRLNDATDIWRDLFDRF-NLTNLPRTYNLTQEIQDLRQGTMSLSEYYTLLKTL 200
Query: 220 WQELDL--CYDDNWRCTEDSVLFLKRQENDRVFVLLAGLNNCLDEVRGRILGRIPLPTLQ 277
W +LD DD C + +V ++ E ++ LAGLN VR +I+ + LP+L
Sbjct: 201 WDQLDSTEALDDPCTCGK-AVRLYQKAEKAKIMKFLAGLNESYAIVRRQIIAKKALPSLA 259
Query: 278 ETFSEVRREEARQS----VMMGKSASITE-SSALVTKGN----EEGKRDGKKPFCDHCNR 328
E + + ++ +++ V + ++E S + +T + G G +P C CNR
Sbjct: 260 EVYHILDQDNSQKGFFNVVAPPAAFQVSEVSHSPITSPEIMYVQSGPNKG-RPTCSFCNR 318
Query: 329 QWHTRDTCWKLHGKPPNWKKKGGKEGR-------ALQATTSDQE--HQSSSSSFPFTKEQ 379
H + C+K HG PP + KG + A Q T S + Q + + F+ +Q
Sbjct: 319 VGHIAERCYKKHGFPPGFTPKGKSSDKPPKPQAVAAQVTLSPDKMTGQLETLAGNFSPDQ 378
Query: 380 LDQLYKMFGSQ-----------------TPSCSIAQIGNF--PNT----ALVSVK----P 412
+ L +F SQ + S S+A G P+T +++V
Sbjct: 379 IQNLIALFSSQLQPQIVSPQTASSQHEASSSQSVAPSGILFSPSTYCFIGILAVSHNSLS 438
Query: 413 SPTWIIDSGATDHMTGESSLFASYS---------PCAGNHKIK----------------- 446
S TW+IDSGAT H++ + LF + P N +I
Sbjct: 439 SDTWVIDSGATHHVSHDRKLFQTLDTSIVSFVNLPTGPNVRISGVGTVLINKDIILQNVL 498
Query: 447 ---------IADGSLSAIAGKDCQANFFHSHCIFKDLNTGKMIGSAKKSGGLYYLD 493
I+ SL+ G + F S C +DL G +G K+ G LY LD
Sbjct: 499 FIPEFRLNLISISSLTTDLG--TRVIFDPSCCQIQDLTKGLTLGEGKRIGNLYVLD 552
>At2g16670 putative retroelement pol polyprotein
Length = 1333
Score = 491 bits (1265), Expect = e-139
Identities = 249/489 (50%), Positives = 342/489 (69%), Gaps = 2/489 (0%)
Query: 712 ALEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETF 771
A E+N TW I LP GK +G +WV+ VK+NSD +VERYKARLVA G Q G DY ETF
Sbjct: 846 AQEENHTWTIEDLPPGKRAIGSQWVYKVKHNSDGSVERYKARLVALGNKQKEGEDYGETF 905
Query: 772 APVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLNVCKL 831
APVAK+ TVR+ L +AV +W ++Q+DV NAFL+GDL+EEVYM PPGFE VC+L
Sbjct: 906 APVAKMATVRLFLDVAVKRNWEIHQMDVHNAFLHGDLREEVYMKLPPGFEASHPNKVCRL 965
Query: 832 QKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTG 891
+K+LYGLKQ+PR WFEK T ++K+ G+ Q+ +D++LF +I ILI YVDD+I+TG
Sbjct: 966 RKALYGLKQAPRCWFEKLTTALKRYGFQQSLADYSLFTLVKGSVRIKILI-YVDDLIITG 1024
Query: 892 DDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGC 951
+ + K+ LA F +KDLG LKYFLG+EVARS GI + QRKY LD++ ETG+ G
Sbjct: 1025 NSQRATQQFKEYLASCFHMKDLGPLKYFLGIEVARSTTGIYICQRKYALDIISETGLLGV 1084
Query: 952 RPADTPMELNAKLW-EKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYE 1010
+PA+ P+E N KL + D RY+RLVG+LIYLA TR D+AFSV ++++FM P E
Sbjct: 1085 KPANFPLEQNHKLGLSTSPLLTDPQRYRRLVGRLIYLAVTRLDLAFSVHILARFMQEPRE 1144
Query: 1011 EHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNL 1070
+H A R++RYLK++PG+G++ +++ D ++ + D+DWAG + R+S TGY +
Sbjct: 1145 DHWAAALRVVRYLKADPGQGVFLRRSGDFQITGWCDSDWAGDPMSRRSVTGYFVQFGDSP 1204
Query: 1071 VTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISI 1130
++W++KKQ V++SSAEAE+RAM+ ELLW+++LL L + P+ + CDSK+AI I
Sbjct: 1205 ISWKTKKQDTVSKSSAEAEYRAMSFLASELLWLKQLLFSLGVSHVQPMIMCCDSKSAIYI 1264
Query: 1131 AHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKL 1190
A NPV H+RTKHIEID HF++++ V G I +V + Q ADI TK L R F +KL
Sbjct: 1265 ATNPVFHERTKHIEIDYHFVRDEFVKGVITPRHVGTTSQLADIFTKPLGRDCFSAFRIKL 1324
Query: 1191 GMTNIYAPT 1199
G+ N+YAPT
Sbjct: 1325 GIRNLYAPT 1333
Score = 54.3 bits (129), Expect = 4e-07
Identities = 33/111 (29%), Positives = 57/111 (50%), Gaps = 6/111 (5%)
Query: 242 KRQENDRVFVLLAGLNNCLDE-VRGRILGRIPLPTLQETFSEVRREE---ARQSVMMGKS 297
K +E D+V L+GL++ L VR ++ RIP+ L+E ++ VR+EE + ++
Sbjct: 90 KDREEDKVHEFLSGLDDALFRTVRSSLVSRIPVQPLEEVYNIVRQEEDLLRNGANVLDDQ 149
Query: 298 ASITESSALVTKGNEEGKRD--GKKPFCDHCNRQWHTRDTCWKLHGKPPNW 346
+ +A + +G+ D K C HCNR H ++C+ + G P W
Sbjct: 150 REVNAFAAQMRPKLYQGRGDEKDKSMVCKHCNRSGHASESCYAVIGYPEWW 200
>At1g57640
Length = 1444
Score = 489 bits (1260), Expect = e-138
Identities = 246/550 (44%), Positives = 369/550 (66%), Gaps = 4/550 (0%)
Query: 651 AIRKPVRSCTKHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEM 710
+I S + +P+ K+V +SS AF + ++ P EA+ W+EA+ E+
Sbjct: 896 SISPEASSSSLYPIEKYVDCHRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEI 955
Query: 711 RALEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSET 770
+L N+T+ I+ LP GK +G KWV+ +KY SD +ERYKARLV G Q G+DY ET
Sbjct: 956 ESLRVNQTFSIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDET 1015
Query: 771 FAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLNVCK 830
FAPVAK++TVR+ L +A DW ++Q+DV NAFL+GDL+EEVYM P GF+ VC+
Sbjct: 1016 FAPVAKMSTVRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCR 1075
Query: 831 LQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILT 890
L KSLYGLKQ+PR WF K + ++K+ G+ Q+ SD++LF ++NDG ++VYVDD+I++
Sbjct: 1076 LHKSLYGLKQAPRCWFSKLSSALKQYGFTQSLSDYSLFS-YNNDGIFVHVLVYVDDLIIS 1134
Query: 891 GDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSG 950
G + + K L F +KDLG LKYFLG+EV+R+ +G +SQRKY+LD++ E G+ G
Sbjct: 1135 GSCPDAVAQFKSYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLG 1194
Query: 951 CRPADTPMELNAKLWEKGNVPV--DIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSP 1008
RP+ P+E N KL P+ D RY+RLVG+LIYL TRP++++SV ++QFM +P
Sbjct: 1195 ARPSAFPLEQNHKL-SLSTSPLLSDSSRYRRLVGRLIYLVVTRPELSYSVHTLAQFMQNP 1253
Query: 1009 YEEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWG 1068
++H A R++RYLKSNPG+G+ T+ ++ + D+D+A + R+S TGY +
Sbjct: 1254 RQDHWNAAIRVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGD 1313
Query: 1069 NLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAI 1128
++W++KKQ V+RSSAEAE+RAMA EL+W++++L +L + +++F DSK+AI
Sbjct: 1314 TPISWKTKKQPTVSRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAI 1373
Query: 1129 SIAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIV 1188
+++ NPVQH+RTKH+E+D HFI++ I+ G I +V S++Q ADILTK+L +
Sbjct: 1374 ALSVNPVQHERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLR 1433
Query: 1189 KLGMTNIYAP 1198
KLG+ +++AP
Sbjct: 1434 KLGILDVHAP 1443
Score = 107 bits (266), Expect = 5e-23
Identities = 93/410 (22%), Positives = 167/410 (40%), Gaps = 63/410 (15%)
Query: 101 LDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTMES 160
L NY EW+ + L + K GF+ G I P P+ W + N+ +++W+ T++S
Sbjct: 38 LKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINALLVSWMKMTIDS 97
Query: 161 TIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMALW 220
+ A+++W+ ++ +S + N + +K+ L KQ V YY +L +W
Sbjct: 98 ELLTNISHRDVARDLWEQIRKRFS-VSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIW 156
Query: 221 QELD------LCYDDNWRC---TEDSVLFLKRQENDRVFVLLAGLNNC-LDEVRGRILGR 270
++ +C C T+ K +E+D V L GLN +R + R
Sbjct: 157 DNINSYRPLRICKCGRCICNLGTDQE----KYREDDMVHQYLYGLNETKFHTIRSSLTSR 212
Query: 271 IPLPTLQETFSEVRREE---------ARQSVMMGKSASITESSALVTKGNEEGKRDGKKP 321
+PLP L+E ++ VR+EE ++ + + + S ++++ ++ K
Sbjct: 213 VPLPGLEEVYNIVRQEEDMVNNRSSNEERTDVTAFAVQMRPRSEVISEKFANSEKLQNKK 272
Query: 322 FCDHCNRQWHTRDTCWKLHGKPPNW--------------KKKGGKEGRALQATTSDQEHQ 367
C HCNR H+ + C+ L G P W + G+ G +
Sbjct: 273 LCTHCNRGGHSPENCFVLIGYPEWWGDRPRGKSNSNGSTSRGRGRFGPGFNGGQPRPTYV 332
Query: 368 SSSSSFPF----------TKEQLDQLYKMFGSQTPS-CSIAQIGNFPNTALVSVKPSPT- 415
+ + PF T D + + Q + G N + S T
Sbjct: 333 NVVMTGPFPSSEHVNRVITDSDRDAVSGLTDEQWRGVVKLLNAGRSDNKSNAHETQSGTC 392
Query: 416 -----WIIDSGATDHMTGESSLFA---SYSP-----CAGNHKIKIADGSL 452
WI+D+GA+ HMTG L + S SP GN ++ +++G++
Sbjct: 393 SLFTSWILDTGASHHMTGNLELLSDMRSMSPVLIILADGNKRVAVSEGTV 442
Score = 30.4 bits (67), Expect = 6.4
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 49 TNNNGSTTTGSGGSGGGGPGGGGGPGGGSFGGGGPYGNNDGYSNIL-KFEVQRLDGKNYM 107
+N+NGST+ G G G G GG P + GP+ +++ + ++ + + G
Sbjct: 305 SNSNGSTSRGRGRFGPGFNGGQPRPTYVNVVMTGPFPSSEHVNRVITDSDRDAVSGLTDE 364
Query: 108 EWSQTVRLILDGK 120
+W V+L+ G+
Sbjct: 365 QWRGVVKLLNAGR 377
>At4g22040 LTR retrotransposon like protein
Length = 1109
Score = 488 bits (1257), Expect = e-138
Identities = 246/542 (45%), Positives = 369/542 (67%), Gaps = 5/542 (0%)
Query: 660 TKHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTW 719
T+ P +K +S + +SS AF + ++ P EA+ W+EA+ E+ +L N+T+
Sbjct: 571 TEFPYSK-MSCNRFTSSHKAFLAAVTAGMEPTTYNEAMVDKAWREAMSAEIESLRVNQTF 629
Query: 720 KIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNT 779
I+ LP GK +G KWV+ +KY SD +ERYKARLV G Q G+DY ETFAPVAK++T
Sbjct: 630 SIVNLPPGKRALGNKWVYKIKYRSDGAIERYKARLVVLGNCQKEGVDYDETFAPVAKMST 689
Query: 780 VRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLNVCKLQKSLYGLK 839
VR+ L +A DW ++Q+DV NAFL+GDL+EEVYM P GF+ VC+L KSLYGLK
Sbjct: 690 VRLFLGVAAARDWHVHQMDVHNAFLHGDLKEEVYMKLPQGFQCDDPSKVCRLHKSLYGLK 749
Query: 840 QSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDR 899
Q+PR WF K + ++K+ G+ Q+ SD++LF ++NDG ++VYVDD+I++G + +
Sbjct: 750 QAPRCWFSKLSSALKQYGFTQSLSDYSLFS-YNNDGVFVHVLVYVDDLIISGSCPDAVAQ 808
Query: 900 LKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPME 959
K L F +KDLG LKYFLG+EV+R+ +G +SQRKY+LD++ E G+ G RP+ P+E
Sbjct: 809 FKSYLESCFHMKDLGLLKYFLGIEVSRNAQGFYLSQRKYVLDIISEMGLLGARPSAFPLE 868
Query: 960 LNAKLWEKGNVPV--DIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVY 1017
N KL P+ D RY+RLVG+LIYLA TRP++++SV ++QFM +P ++H A
Sbjct: 869 QNHKL-SLSTSPLLSDSSRYRRLVGRLIYLAVTRPELSYSVHTLAQFMQNPRQDHWNAAI 927
Query: 1018 RILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKK 1077
R++RYLKSNPG+G+ T+ ++ + D+D+A + R+S TGY + ++W++KK
Sbjct: 928 RVVRYLKSNPGQGILLSSTSTLQINGWCDSDYAACPLTRRSLTGYFVQLGDTPISWKTKK 987
Query: 1078 QGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQH 1137
Q ++RSSAEAE+RAMA EL+W++++L +L + +++F DSK+AI+++ NPVQH
Sbjct: 988 QPTISRSSAEAEYRAMAFLTQELMWLKRVLYDLGVSHVQAMRIFSDSKSAIALSVNPVQH 1047
Query: 1138 DRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNIYA 1197
+RTKH+E+D HFI++ I+ G I +V S++Q ADILTK+L + KLG+ +++A
Sbjct: 1048 ERTKHVEVDCHFIRDAILDGIIATSFVPSHKQLADILTKALGEKEVRYFLRKLGILDVHA 1107
Query: 1198 PT 1199
PT
Sbjct: 1108 PT 1109
Score = 64.3 bits (155), Expect = 4e-10
Identities = 31/124 (25%), Positives = 60/124 (48%), Gaps = 1/124 (0%)
Query: 101 LDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTMES 160
L NY EW+ + L + K GF+ G I P P+ W + N+ +++W+ T++S
Sbjct: 38 LKTNNYEEWACGFKTALRSRKKFGFLDGTIPQPLDGSPDLEDWLTINALLVSWMKMTIDS 97
Query: 161 TIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMALW 220
+ A+++W+ ++ +S + N + +K+ L KQ V YY +L +W
Sbjct: 98 ELLTNISHRDVARDLWEQIRKRFS-VSNGPKNQKMKADLATCKQEGMTVEGYYGKLNKIW 156
Query: 221 QELD 224
++
Sbjct: 157 DNIN 160
>At2g24660 putative retroelement pol polyprotein
Length = 1156
Score = 468 bits (1205), Expect = e-132
Identities = 237/539 (43%), Positives = 351/539 (64%), Gaps = 23/539 (4%)
Query: 662 HPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKI 721
+P++ +VS S+ AF + ++ + PK+ +EA++I W +A+ +E+ ALE NKTW I
Sbjct: 611 YPLSDYVSDDCFSAGHKAFLAAITANDEPKHFKEAVRIKVWNDAMFKEVDALEINKTWDI 670
Query: 722 MTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVR 781
+ LP GK +G +WV+ KYN+D ++ERYKARLV +G Q G DY+ETFAPV K+ TVR
Sbjct: 671 VDLPPGKVAIGSQWVYKTKYNADGSIERYKARLVVQGNKQVEGEDYNETFAPVVKMTTVR 730
Query: 782 VLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLNVCKLQKSLYGLKQS 841
LL L W + Q+DV NAFL+GDL EEVYM PPGF VC+L+KSLYGLKQ+
Sbjct: 731 TLLRLVAANQWEVYQMDVNNAFLHGDLDEEVYMKLPPGFRHSHPDKVCRLRKSLYGLKQA 790
Query: 842 PRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLK 901
PR WF+K + ++ + G++Q D++ F N ++ +L VYVDD+++ G+D + + K
Sbjct: 791 PRCWFKKLSDALLRFGFVQGHEDYSFFSYTRNGIELRVL-VYVDDLLICGNDGYMLQKFK 849
Query: 902 KNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELN 961
+ L + F +KDLG LKYFLG+EV+R +GI +SQRKY LD++ ++G GCRPA TP+E N
Sbjct: 850 EYLGRCFSMKDLGKLKYFLGIEVSRGSEGIFLSQRKYALDIITDSGNLGCRPALTPLEQN 909
Query: 962 AKL-WEKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRIL 1020
L + G + D Y+RLVG+L+YL HTRP++++SV V+SQFM +P E HL A RI+
Sbjct: 910 HHLATDDGPLLADAKPYRRLVGRLLYLLHTRPELSYSVHVLSQFMQTPREAHLAAAMRIV 969
Query: 1021 RYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGV 1080
R+LK +PG+G+ + + ++ D+D+ R+S + Y + G+ ++W++KKQ
Sbjct: 970 RFLKGSPGQGILLNADTELQLDVYCDSDFQTCPKTRRSLSAYVVLLGGSPISWKTKKQDT 1029
Query: 1081 VARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRT 1140
V+ SSAEAE+RAM+ + E+ W++KLL+EL NPV H+RT
Sbjct: 1030 VSHSSAEAEYRAMSVALREIKWLRKLLKELA---------------------NPVFHERT 1068
Query: 1141 KHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNIYAPT 1199
KHIE D H +++ + G I +V +NEQ ADI TK+L R F L+ KLG+ +++ PT
Sbjct: 1069 KHIESDCHSVRDAVRDGIITTHHVRTNEQLADIFTKALGRSQFLYLMSKLGIQDLHTPT 1127
>At4g23160 putative protein
Length = 1240
Score = 457 bits (1176), Expect = e-128
Identities = 231/521 (44%), Positives = 346/521 (66%), Gaps = 8/521 (1%)
Query: 656 VRSCTKHPMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEK 715
V S T H +++F+SY +S + +F ++ + P EA + W A+ +E+ A+E
Sbjct: 52 VASLTIHDISQFLSYEKVSPLYHSFLVCIAKAKEPSTYNEAKEFLVWCGAMDDEIGAMET 111
Query: 716 NKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVA 775
TW+I TLP K +GCKWV+ +KYNSD T+ERYKARLVAKG+TQ GID+ ETF+PV
Sbjct: 112 THTWEICTLPPNKKPIGCKWVYKIKYNSDGTIERYKARLVAKGYTQQEGIDFIETFSPVC 171
Query: 776 KLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLN-----VCK 830
KL +V+++L+++ ++ L+QLD+ NAFLNGDL EE+YM PPG+ + G + VC
Sbjct: 172 KLTSVKLILAISAIYNFTLHQLDISNAFLNGDLDEEIYMKLPPGYAARQGDSLPPNAVCY 231
Query: 831 LQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILT 890
L+KS+YGLKQ+ R WF KF+ ++ G++Q+ SDHT F++ + + +L VYVDDII+
Sbjct: 232 LKKSIYGLKQASRQWFLKFSVTLIGFGFVQSHSDHTYFLKITATLFLCVL-VYVDDIIIC 290
Query: 891 GDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSG 950
++ +D LK L F+++DLG LKYFLG+E+ARS GI + QRKY LDLL+ETG+ G
Sbjct: 291 SNNDAAVDELKSQLKSCFKLRDLGPLKYFLGLEIARSAAGINICQRKYALDLLDETGLLG 350
Query: 951 CRPADTPMELNAKL-WEKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPY 1009
C+P+ PM+ + G VD Y+RL+G+L+YL TR DI+F+V+ +SQF +P
Sbjct: 351 CKPSSVPMDPSVTFSAHSGGDFVDAKAYRRLIGRLMYLQITRLDISFAVNKLSQFSEAPR 410
Query: 1010 EEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGN 1069
H +AV +IL Y+K G+GL++ + + +F+DA + R+ST GYC ++ +
Sbjct: 411 LAHQQAVMKILHYIKGTVGQGLFYSSQAEMQLQVFSDASFQSCKDTRRSTNGYCMFLGTS 470
Query: 1070 LVTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAIS 1129
L++W+SKKQ VV++SSAEAE+RA++ E++W+ + EL+L + P LFCD+ AAI
Sbjct: 471 LISWKSKKQQVVSKSSAEAEYRALSFATDEMMWLAQFFRELQLPLSKPTLLFCDNTAAIH 530
Query: 1130 IAHNPVQHDRTKHIEIDRHFIKEK-IVSGTICLPYVTSNEQ 1169
IA N V H+RTKHIE D H ++E+ + T+ + +EQ
Sbjct: 531 IATNAVFHERTKHIESDCHSVRERSVYQATLSYSFQAYDEQ 571
>At1g47650 hypothetical protein
Length = 1409
Score = 456 bits (1174), Expect = e-128
Identities = 235/521 (45%), Positives = 349/521 (66%), Gaps = 10/521 (1%)
Query: 669 SYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMTLPAGK 728
S++ S F ++ + + + +LK+ V E+ A+E TW+I TLPAGK
Sbjct: 710 SHTVFISRNVVFHEEVFPLAVDPKSESSLKLFTPMVPVSSEIGAMETTHTWEITTLPAGK 769
Query: 729 NTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVRVLLSLAV 788
VGCKWVF++K+ +D ++ERYKARLVAKG+TQ G+DY++TF+PVAK+ T+++LL ++
Sbjct: 770 KAVGCKWVFSLKFLADGSLERYKARLVAKGYTQKEGLDYTDTFSPVAKMTTIKLLLKISA 829
Query: 789 NLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGL-----NVCKLQKSLYGLKQSPR 843
+ W L QLDV NAFLNG+L+EE+YM P G+ + G+ +VC+L++S+YGLKQ+ R
Sbjct: 830 SKKWFLKQLDVSNAFLNGELEEEIYMKLPEGYAARKGITLPPNSVCRLKRSIYGLKQASR 889
Query: 844 AWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLKKN 903
WF+KF+ S+ G+ + DHTLF++ DG+ I++VYVDDI + +L ++
Sbjct: 890 QWFKKFSASLLDLGFKKTHGDHTLFIK-EYDGEFVIVLVYVDDIAIASTSEGAAIQLTQD 948
Query: 904 LAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELNAK 963
L + F+++DLG LKYFLG+E+AR+ GI + QRKY L+LL TGM C+P PM N K
Sbjct: 949 LQQRFKLRDLGDLKYFLGLEIARTEAGISICQRKYALELLASTGMVNCKPVSVPMIPNVK 1008
Query: 964 LWE-KGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRILRY 1022
+ + G++ D +Y+R+VGKL+YL TR DI F+V+ + QF +P HL+A YR+L+Y
Sbjct: 1009 MMKTDGDLLDDREQYRRIVGKLMYLTITRLDITFAVNKLCQFSSAPRTSHLQAAYRVLQY 1068
Query: 1023 LKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVA 1082
+K + G+GL++ + D + F D+DWA R+STTG+ +V +L++WRSKKQ VV+
Sbjct: 1069 IKGSVGQGLFYSASADLTLKGFADSDWASCPDSRRSTTGFSMFVGDSLISWRSKKQHVVS 1128
Query: 1083 RSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRTKH 1142
RSSAEAE+RA+A CEL+W+ LL LK +P+ L+ DS AI IA NPV H+RTKH
Sbjct: 1129 RSSAEAEYRALALVTCELVWLHTLLMSLKASYLVPV-LYSDSTTAIYIATNPVFHERTKH 1187
Query: 1143 IEIDRHFIKEKIVSGTICLPYVTSNEQ--TADILTKSLARP 1181
IE+D H ++EK+ +G + L +V + +Q TA +LA P
Sbjct: 1188 IELDCHTVREKLDNGELKLLHVRTEDQPSTAAYPPPNLAEP 1228
Score = 110 bits (274), Expect = 6e-24
Identities = 73/275 (26%), Positives = 133/275 (47%), Gaps = 17/275 (6%)
Query: 100 RLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTTDPNYRFWKSENSTIIAWLLSTME 159
RLD NY +W+ + + LD K K GFI G + P +D N+R W S + +WLL+++
Sbjct: 81 RLDETNYGDWNVAMLISLDAKNKSGFIDGTLPRPLESDKNFRLWSRCKSMVKSWLLNSVS 140
Query: 160 STIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQAKQSDRDVTTYYNELMAL 219
I + + + A ++W + + + ++ N R ++L + +Q ++ YY L L
Sbjct: 141 PQIYRSILRMNDASDIWRDLHSRF-NVTNLPRTYNLTQEIQDFRQGTLSLSEYYTRLKTL 199
Query: 220 WQELDLCYDDNWRCTEDSVLFLKRQ-ENDRVFVLLAGLNNCLDEVRGRILGRIPLPTLQE 278
W +L+ + + C + L+++ E ++ LLAGLN+ +R +I+ + LP+L E
Sbjct: 200 WDQLESTEELDDPCICGKAMRLQQKAEQAKIVKLLAGLNDSYAIIRRQIIAKKALPSLAE 259
Query: 279 TFSEVRREEARQ--SVMMGKSASITESSALVTKGNEEGKRDGKKPFCDHCNRQW--HTRD 334
+ + ++ ++Q S ++ A+ S A++ N+ C +W H +
Sbjct: 260 VYHILDQDNSQQGFSNVVAPPAAFQVSEAMMATNNDVNM------LCS----EWVGHIAE 309
Query: 335 TCWKLHGKPPNWKKKGGKEGRALQATTSDQEHQSS 369
C+K HG P + K GK G Q S H S
Sbjct: 310 RCYKKHGFPLGFTPK-GKGGDKSQVIDSGAIHHVS 343
>At1g59265 polyprotein, putative
Length = 1466
Score = 456 bits (1173), Expect = e-128
Identities = 262/678 (38%), Positives = 380/678 (55%), Gaps = 33/678 (4%)
Query: 537 PTNSGATFSNQNHNEQILDIDSNEEEPEMPQQNDSNKETKNRFNSSDPIWKGNVYERRDH 596
P++ A F N + LD + P P+ T R N P + + + H
Sbjct: 800 PSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEP------TAPRQNGPQPTTQPTQTQTQTH 853
Query: 597 KRGDEGPILQPCQESEPRNDPNHH-------PNPGKSSIPKCRGKSSSITTSDDPD---L 646
Q ++ P N+ P SS P +SS +TS P +
Sbjct: 854 SS-------QNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILI 906
Query: 647 HIPIAIRKPVRSCTKHPMAKFVSYSNLSSSFA------AFTSQLSTVEIPKNVQEALKIP 700
H P + + V + + P+ + + + L+ P+ +ALK
Sbjct: 907 HPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDE 966
Query: 701 KWKEAVLEEMRALEKNKTWKIMTLPAGKNT-VGCKWVFTVKYNSDNTVERYKARLVAKGF 759
+W+ A+ E+ A N TW ++ P T VGC+W+FT KYNSD ++ RYKARLVAKG+
Sbjct: 967 RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARLVAKGY 1026
Query: 760 TQAYGIDYSETFAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPG 819
Q G+DY+ETF+PV K ++R++L +AV+ WP+ QLDV NAFL G L ++VYM PPG
Sbjct: 1027 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPG 1086
Query: 820 FEDKFGLN-VCKLQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIA 878
F DK N VCKL+K+LYGLKQ+PRAW+ + + G++ + SD +LF+ I
Sbjct: 1087 FIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFV-LQRGKSIV 1145
Query: 879 ILIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKY 938
++VYVDDI++TG+D + NL++ F +KD L YFLG+E R G+ +SQR+Y
Sbjct: 1146 YMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRY 1205
Query: 939 ILDLLEETGMSGCRPADTPMELNAKL-WEKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFS 997
ILDLL T M +P TPM + KL G D Y+ +VG L YLA TRPDI+++
Sbjct: 1206 ILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYA 1265
Query: 998 VSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRK 1057
V+ +SQFMH P EEHL+A+ RILRYL P G++ KK N + ++DADWAG D
Sbjct: 1266 VNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYV 1325
Query: 1058 STTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLP 1117
ST GY Y+ + ++W SKKQ V RSS EAE+R++A E+ WI LL EL +++ P
Sbjct: 1326 STNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRP 1385
Query: 1118 LKLFCDSKAAISIAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKS 1177
++CD+ A + NPV H R KHI ID HFI+ ++ SG + + +V++++Q AD LTK
Sbjct: 1386 PVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1445
Query: 1178 LARPNFERLIVKLGMTNI 1195
L+R F+ K+G+T +
Sbjct: 1446 LSRTAFQNFASKIGVTRV 1463
Score = 94.4 bits (233), Expect = 4e-19
Identities = 103/479 (21%), Positives = 177/479 (36%), Gaps = 80/479 (16%)
Query: 86 NNDGYSNILKFEVQRLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTT--------- 136
NN N+ V +L NY+ WS+ V + DG GF+ G MP T
Sbjct: 11 NNTSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRV 70
Query: 137 DPNYRFWKSENSTIIAWLLSTMESTIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLK 196
+P+Y WK ++ I + +L + +++ TA +W+ ++ Y++ + + L+
Sbjct: 71 NPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYAN-PSYGHVTQLR 129
Query: 197 SRLWQAKQSDRDVTTYYNELMALWQELDLCYDDNWRCTEDSVLFLKRQENDRVFVLLAGL 256
++L Q + + + Y L+ + +L L L +++V +L L
Sbjct: 130 TQLKQWTKGTKTIDDYMQGLVTRFDQLAL-------------LGKPMDHDEQVERVLENL 176
Query: 257 NNCLDEVRGRILGRIPLPTLQETFSEVRREEAR------QSVMMGKSASITESSALVTKG 310
V +I + PTL E + E++ +V+ + +++ + T
Sbjct: 177 PEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNN 236
Query: 311 NEEGKRDGKKPFCDHCNRQWHTRDTCWKLHGKPPNWKKKGGKEGRALQATTSDQEHQSSS 370
N G R+ + ++ N + + H PN + G+ Q H +
Sbjct: 237 NNNGNRNNRYDNRNNNNNSKPWQQSSTNFH---PNNNQSKPYLGKC--QICGVQGHSAKR 291
Query: 371 SSFPFTKEQLDQLYKMFGSQTPSCSIAQIGNFPNTALVSVKPSPTWIIDSGATDHMTGES 430
S QL SQ P N AL S S W++DSGAT H+T +
Sbjct: 292 CS------QLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDF 345
Query: 431 SLFASYSPCAGNHKIKIADGSLSAIAG--------------------------------K 458
+ + + P G + +ADGS I+ +
Sbjct: 346 NNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 405
Query: 459 DCQAN-----FFHSHCIFKDLNTGKMIGSAKKSGGLYYLDNGPDFKDQPQQIMLSQNSE 512
C AN FF + KDLNTG + K LY P QP + S +S+
Sbjct: 406 LCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY---EWPIASSQPVSLFASPSSK 461
>At1g58889 polyprotein, putative
Length = 1466
Score = 454 bits (1169), Expect = e-127
Identities = 261/678 (38%), Positives = 379/678 (55%), Gaps = 33/678 (4%)
Query: 537 PTNSGATFSNQNHNEQILDIDSNEEEPEMPQQNDSNKETKNRFNSSDPIWKGNVYERRDH 596
P++ A F N + LD + P P+ T R N P + + + H
Sbjct: 800 PSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEP------TAPRQNGPQPTTQPTQTQTQTH 853
Query: 597 KRGDEGPILQPCQESEPRNDPNHH-------PNPGKSSIPKCRGKSSSITTSDDPD---L 646
Q ++ P N+ P SS P +SS +TS P +
Sbjct: 854 SS-------QNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPTPPSILI 906
Query: 647 HIPIAIRKPVRSCTKHPMAKFVSYSNLSSSFA------AFTSQLSTVEIPKNVQEALKIP 700
H P + + V + + P+ + + + L+ P+ +ALK
Sbjct: 907 HPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAVSLAAESEPRTAIQALKDE 966
Query: 701 KWKEAVLEEMRALEKNKTWKIMTLPAGKNT-VGCKWVFTVKYNSDNTVERYKARLVAKGF 759
+W+ A+ E+ A N TW ++ P T VGC+W+FT KYNSD ++ RYKAR VAKG+
Sbjct: 967 RWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYKARFVAKGY 1026
Query: 760 TQAYGIDYSETFAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPG 819
Q G+DY+ETF+PV K ++R++L +AV+ WP+ QLDV NAFL G L ++VYM PPG
Sbjct: 1027 NQRPGLDYAETFSPVIKSTSIRIVLGVAVDRSWPIRQLDVNNAFLQGTLTDDVYMSQPPG 1086
Query: 820 FEDKFGLN-VCKLQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIA 878
F DK N VCKL+K+LYGLKQ+PRAW+ + + G++ + SD +LF+ I
Sbjct: 1087 FIDKDRPNYVCKLRKALYGLKQAPRAWYVELRNYLLTIGFVNSVSDTSLFV-LQRGKSIV 1145
Query: 879 ILIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKY 938
++VYVDDI++TG+D + NL++ F +KD L YFLG+E R G+ +SQR+Y
Sbjct: 1146 YMLVYVDDILITGNDPTLLHNTLDNLSQRFSVKDHEELHYFLGIEAKRVPTGLHLSQRRY 1205
Query: 939 ILDLLEETGMSGCRPADTPMELNAKL-WEKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFS 997
ILDLL T M +P TPM + KL G D Y+ +VG L YLA TRPDI+++
Sbjct: 1206 ILDLLARTNMITAKPVTTPMAPSPKLSLYSGTKLTDPTEYRGIVGSLQYLAFTRPDISYA 1265
Query: 998 VSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRK 1057
V+ +SQFMH P EEHL+A+ RILRYL P G++ KK N + ++DADWAG D
Sbjct: 1266 VNRLSQFMHMPTEEHLQALKRILRYLAGTPNHGIFLKKGNTLSLHAYSDADWAGDKDDYV 1325
Query: 1058 STTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLP 1117
ST GY Y+ + ++W SKKQ V RSS EAE+R++A E+ WI LL EL +++ P
Sbjct: 1326 STNGYIVYLGHHPISWSSKKQKGVVRSSTEAEYRSVANTSSEMQWICSLLTELGIRLTRP 1385
Query: 1118 LKLFCDSKAAISIAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKS 1177
++CD+ A + NPV H R KHI ID HFI+ ++ SG + + +V++++Q AD LTK
Sbjct: 1386 PVIYCDNVGATYLCANPVFHSRMKHIAIDYHFIRNQVQSGALRVVHVSTHDQLADTLTKP 1445
Query: 1178 LARPNFERLIVKLGMTNI 1195
L+R F+ K+G+T +
Sbjct: 1446 LSRTAFQNFASKIGVTRV 1463
Score = 94.4 bits (233), Expect = 4e-19
Identities = 103/479 (21%), Positives = 177/479 (36%), Gaps = 80/479 (16%)
Query: 86 NNDGYSNILKFEVQRLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTT--------- 136
NN N+ V +L NY+ WS+ V + DG GF+ G MP T
Sbjct: 11 NNTSILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAPRV 70
Query: 137 DPNYRFWKSENSTIIAWLLSTMESTIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLK 196
+P+Y WK ++ I + +L + +++ TA +W+ ++ Y++ + + L+
Sbjct: 71 NPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYAN-PSYGHVTQLR 129
Query: 197 SRLWQAKQSDRDVTTYYNELMALWQELDLCYDDNWRCTEDSVLFLKRQENDRVFVLLAGL 256
++L Q + + + Y L+ + +L L L +++V +L L
Sbjct: 130 TQLKQWTKGTKTIDDYMQGLVTRFDQLAL-------------LGKPMDHDEQVERVLENL 176
Query: 257 NNCLDEVRGRILGRIPLPTLQETFSEVRREEAR------QSVMMGKSASITESSALVTKG 310
V +I + PTL E + E++ +V+ + +++ + T
Sbjct: 177 PEEYKPVIDQIAAKDTPPTLTEIHERLLNHESKILAVSSATVIPITANAVSHRNTTTTNN 236
Query: 311 NEEGKRDGKKPFCDHCNRQWHTRDTCWKLHGKPPNWKKKGGKEGRALQATTSDQEHQSSS 370
N G R+ + ++ N + + H PN + G+ Q H +
Sbjct: 237 NNNGNRNNRYDNRNNNNNSKPWQQSSTNFH---PNNNQSKPYLGKC--QICGVQGHSAKR 291
Query: 371 SSFPFTKEQLDQLYKMFGSQTPSCSIAQIGNFPNTALVSVKPSPTWIIDSGATDHMTGES 430
S QL SQ P N AL S S W++DSGAT H+T +
Sbjct: 292 CS------QLQHFLSSVNSQQPPSPFTPWQPRANLALGSPYSSNNWLLDSGATHHITSDF 345
Query: 431 SLFASYSPCAGNHKIKIADGSLSAIAG--------------------------------K 458
+ + + P G + +ADGS I+ +
Sbjct: 346 NNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYR 405
Query: 459 DCQAN-----FFHSHCIFKDLNTGKMIGSAKKSGGLYYLDNGPDFKDQPQQIMLSQNSE 512
C AN FF + KDLNTG + K LY P QP + S +S+
Sbjct: 406 LCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELY---EWPIASSQPVSLFASPSSK 461
>At1g44510 polyprotein, putative
Length = 1459
Score = 446 bits (1147), Expect = e-125
Identities = 270/725 (37%), Positives = 404/725 (55%), Gaps = 46/725 (6%)
Query: 503 QQIMLSQNSETNIGAPKENAQESIMELNPLVNEVPTNSGATFSNQNHNEQILDIDS---- 558
+ +M +++ + +E +Q S LV ++S ++ +N +L + S
Sbjct: 746 RHVMFDESTYPFAASIREQSQSS------LVTPPESSSSSSPANSGFPCSVLRLQSPPAS 799
Query: 559 NEEEPEMPQQNDSNKETKNRFNSSDPIWKGNVYERR--------------DHKRGDEGPI 604
+ E P PQQ + + + + S P V + H+ G E
Sbjct: 800 SPETPSPPQQQNDSPVSPRQTGSPTPSHHSQVRDSTLSPSPSVSNSEPTAPHENGPE--- 856
Query: 605 LQPCQESEPRND-----PNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIRKPVRSC 659
P +S P + PN +P SS + R S TT+ P+ IA RS
Sbjct: 857 --PEAQSNPNSPFIGPLPNPNPETNPSSSIEQRPVDKSTTTALPPN-QTTIAATSNSRSQ 913
Query: 660 ---TKHPMAKFVSYSNLSS--SFAAFTSQLSTVEI--PKNVQEALKIPKWKEAVLEEMRA 712
H M K S +N++ + + T L+ + P V +ALK KW+ A+ +E A
Sbjct: 914 PPKNNHQM-KTRSKNNITKPKTKTSLTVALTQPHLSEPNTVTQALKDKKWRFAMSDEFDA 972
Query: 713 LEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFA 772
++N TW ++ ++ VGC+WVF +KY + +++YKARLVAKGF Q YG+DY+ETF+
Sbjct: 973 QQRNHTWDLVPPNPTQHLVGCRWVFKLKYLPNGLIDKYKARLVAKGFNQQYGVDYAETFS 1032
Query: 773 PVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFG-LNVCKL 831
PV K T+RV+L +AV +WPL QLDV NAFL G L EEVYM PPGF DK +VC+L
Sbjct: 1033 PVIKATTIRVVLDVAVKKNWPLKQLDVNNAFLQGTLTEEVYMAQPPGFVDKDRPSHVCRL 1092
Query: 832 QKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTG 891
+K++YGLKQ+PRAW+ + + G++ + +D +LF+ +S+ + L+VYVDDII+TG
Sbjct: 1093 RKAIYGLKQAPRAWYMELKQHLLNIGFVNSLADTSLFI-YSHGTTLLYLLVYVDDIIVTG 1151
Query: 892 DDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGC 951
D + + +LA+ F IKD L YFLG+E R+ G+ + QRKY+ DLL + M
Sbjct: 1152 SDHKSVSAVLSSLAERFSIKDPTDLHYFLGIEATRTNTGLHLMQRKYMTDLLAKHNMLDA 1211
Query: 952 RPADTPMELNAKLWEKGNVPV-DIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYE 1010
+P TP+ + KL G + D Y+ +VG L YLA TRPDIAF+V+ +SQFMH P
Sbjct: 1212 KPVATPLPTSPKLTLHGGTKLNDASEYRSVVGSLQYLAFTRPDIAFAVNRLSQFMHQPTS 1271
Query: 1011 EHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNL 1070
+H +A R+LRYL G++ ++ + F+DADWAG D ST Y Y+ N
Sbjct: 1272 DHWQAAKRVLRYLAGTTTHGIFLNSSSPIHLHAFSDADWAGDSADYVSTNAYVIYLGRNP 1331
Query: 1071 VTWRSKKQGVVARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISI 1130
++W SKKQ V+RSS E+E+RA+A E+ W+ LL EL +++ +FCD+ A I
Sbjct: 1332 ISWSSKKQRGVSRSSTESEYRAVANAASEIRWLCSLLTELHIRLPHGPTIFCDNIGATYI 1391
Query: 1131 AHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKL 1190
NPV H R KHI +D HF++ I S + + +V++N+Q AD LTKSL+RP+F K+
Sbjct: 1392 CANPVFHSRMKHIALDYHFVRGMIQSRALRVSHVSTNDQLADALTKSLSRPHFLSARSKI 1451
Query: 1191 GMTNI 1195
G+ +
Sbjct: 1452 GVRQL 1456
Score = 77.8 bits (190), Expect = 3e-14
Identities = 76/375 (20%), Positives = 145/375 (38%), Gaps = 41/375 (10%)
Query: 92 NILKFEVQRLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTT---------DPNYRF 142
N+ V +L NY+ WS + +LDG G++ + +P T +P++
Sbjct: 24 NVNTSNVTKLTSTNYLMWSIQIHALLDGYDLAGYLDNSVVIPPETTTINSVVSANPSFTL 83
Query: 143 WKSENSTIIAWLLSTMESTIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQA 202
WK ++ I + L+ + ++ + +W + TY+ + I L+ ++ +
Sbjct: 84 WKRQDKLIFSALIGAISPAVQSLVSRATNSSQIWSTLNNTYAK-PSYGHIKQLRQQIQRL 142
Query: 203 KQSDRDVTTYYNELMALWQELDLCYDDNWRCTEDSVLFLKRQENDRVFVLLAGLNNCLDE 262
+ + + Y +L ++L + ++V +L GL
Sbjct: 143 TKGTKTIDEYVQSHTTRLDQL-------------AILGKPMEHEEQVEHILKGLPEEYKT 189
Query: 263 VRGRILGRIPLPTLQETFSEVRREEARQSVMMGKSASITESSALVTKGNEEGKRDGKKPF 322
V +I G+ PT+ E + E++ S + SS+ N +R+ F
Sbjct: 190 VVDQIEGKDNTPTITEIHERLINHESKLL-----SDEVPPSSSFPMSANAVQQRN----F 240
Query: 323 CDHCNRQWHTRDTCWKLHGKPPNWKKKGGKEGRALQATTSDQEHQSSSSSFP-FTKEQLD 381
++CN+ H H N + ++ Q T + S + +
Sbjct: 241 NNNCNQNQHKNRYQGNTHNNNTNTNSQPSTYNKSGQRTFKPYLGKCQICSVQGHSARRCP 300
Query: 382 QLYKMFGSQTPSCSIAQIGNFP-----NTALVSVKPSPTWIIDSGATDHMTGESSLFASY 436
QL M Q P+ S A P N A+ S + W++DSGAT H+T + + + +
Sbjct: 301 QLQAM---QLPASSSAHSPFTPWQPRANLAIGSPYAANPWLLDSGATHHITSDLNALSLH 357
Query: 437 SPCAGNHKIKIADGS 451
P G + IADG+
Sbjct: 358 QPYNGGEYVMIADGT 372
>At4g02960 putative polyprotein of LTR transposon
Length = 1456
Score = 444 bits (1141), Expect = e-124
Identities = 268/715 (37%), Positives = 392/715 (54%), Gaps = 51/715 (7%)
Query: 491 YLDNGPDFKDQPQQIMLSQNSETNIGAPKENAQESIMELNPLVN-EVPTNSGATFSNQNH 549
+LD P P + +Q S +N+ + ++ S P N PT N N
Sbjct: 773 HLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPSSSEPTAPSHNGPQPTAQPHQTQNSNS 832
Query: 550 NEQILDIDSNEEEPEMPQQNDSNKETKNRFNSSDPIWKGNVYERRDHKRGDEGPILQPCQ 609
N IL N P P N N+ NS P + PI P
Sbjct: 833 NSPIL----NNPNPNSPSPNSPNQ------NSPLP----------------QSPISSP-- 864
Query: 610 ESEPRNDPNHHPNPGKS-SIPKCRGKSSSITTSDDPDLHIPIAIR----KPVRSCTKHPM 664
H P P S S P SS+ T P L P I+ PV + +
Sbjct: 865 ---------HIPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATR 915
Query: 665 AKF-VSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMT 723
AK + N S+A + L+ P+ +A+K +W++A+ E+ A N TW ++
Sbjct: 916 AKDGIRKPNQKYSYA---TSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVP 972
Query: 724 LPAGKNT-VGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVRV 782
P T VGC+W+FT K+NSD ++ RYKARLVAKG+ Q G+DY+ETF+PV K ++R+
Sbjct: 973 PPPPSVTIVGCRWIFTKKFNSDGSLNRYKARLVAKGYNQRPGLDYAETFSPVIKSTSIRI 1032
Query: 783 LLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFGLN-VCKLQKSLYGLKQS 841
+L +AV+ WP+ QLDV NAFL G L +EVYM PPGF DK + VC+L+K++YGLKQ+
Sbjct: 1033 VLGVAVDRSWPIRQLDVNNAFLQGTLTDEVYMSQPPGFVDKDRPDYVCRLRKAIYGLKQA 1092
Query: 842 PRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLK 901
PRAW+ + + G++ + SD +LF+ I ++VYVDDI++TG+D V +
Sbjct: 1093 PRAWYVELRTYLLTVGFVNSISDTSLFV-LQRGRSIIYMLVYVDDILITGNDTVLLKHTL 1151
Query: 902 KNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELN 961
L++ F +K+ L YFLG+E R +G+ +SQR+Y LDLL T M +P TPM +
Sbjct: 1152 DALSQRFSVKEHEDLHYFLGIEAKRVPQGLHLSQRRYTLDLLARTNMLTAKPVATPMATS 1211
Query: 962 AKLW-EKGNVPVDIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRIL 1020
KL G D Y+ +VG L YLA TRPD++++V+ +SQ+MH P ++H A+ R+L
Sbjct: 1212 PKLTLHSGTKLPDPTEYRGIVGSLQYLAFTRPDLSYAVNRLSQYMHMPTDDHWNALKRVL 1271
Query: 1021 RYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGV 1080
RYL P G++ KK N + ++DADWAG D ST GY Y+ + ++W SKKQ
Sbjct: 1272 RYLAGTPDHGIFLKKGNTLSLHAYSDADWAGDTDDYVSTNGYIVYLGHHPISWSSKKQKG 1331
Query: 1081 VARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRT 1140
V RSS EAE+R++A EL WI LL EL +++ P ++CD+ A + NPV H R
Sbjct: 1332 VVRSSTEAEYRSVANTSSELQWICSLLTELGIQLSHPPVIYCDNVGATYLCANPVFHSRM 1391
Query: 1141 KHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNI 1195
KHI +D HFI+ ++ SG + + +V++++Q AD LTK L+R F+ K+G+ +
Sbjct: 1392 KHIALDYHFIRNQVQSGALRVVHVSTHDQLADTLTKPLSRVAFQNFSRKIGVIKV 1446
Score = 69.3 bits (168), Expect = 1e-11
Identities = 75/375 (20%), Positives = 139/375 (37%), Gaps = 51/375 (13%)
Query: 87 NDGYSNILKFEVQRLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTT---------D 137
N N+ V +L NY+ WS+ V + DG GF+ G MP T +
Sbjct: 12 NTNILNVNMSNVTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRVN 71
Query: 138 PNYRFWKSENSTIIAWLLSTMESTIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKS 197
P+Y W+ ++ I + +L + +++ TA +W+ ++ Y++ + + L+
Sbjct: 72 PDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYAN-PSYGHVTQLR- 129
Query: 198 RLWQAKQSDRDVTTYYNELMALWQELDLCYDDNWRCTEDSVLFLKRQENDRVFVLLAGLN 257
T +++L L + +D +++V +L L
Sbjct: 130 -----------FITRFDQLALLGKPMD--------------------HDEQVERVLENLP 158
Query: 258 NCLDEVRGRILGRIPLPTLQETFSEVRREEARQSVMMGKSASITESSA-LVTKGNEEGKR 316
+ V +I + P+L E + E++ ++ SA + +A +VT N R
Sbjct: 159 DDYKPVIDQIAAKDTPPSLTEIHERLINRESK--LLALNSAEVVPITANVVTHRNTNTNR 216
Query: 317 DGKKPFCDHCNRQWHTRDTCWKLHGKPPNWKKKGGKEGRALQATTSDQEHQSSSSSFPFT 376
+ + + R W+ + K S Q H +
Sbjct: 217 NQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKRC----- 271
Query: 377 KEQLDQLYKMFGSQTPSCSIAQIGNFPNTALVSVKPSPTWIIDSGATDHMTGESSLFASY 436
QL Q Q + N A+ S + W++DSGAT H+T + + + +
Sbjct: 272 -PQLHQFQSTTNQQQSTSPFTPWQPRANLAVNSPYNANNWLLDSGATHHITSDFNNLSFH 330
Query: 437 SPCAGNHKIKIADGS 451
P G + IADGS
Sbjct: 331 QPYTGGDDVMIADGS 345
>At4g16870 retrotransposon like protein
Length = 1474
Score = 438 bits (1126), Expect = e-122
Identities = 246/595 (41%), Positives = 355/595 (59%), Gaps = 12/595 (2%)
Query: 603 PILQPCQESEPRNDPNHHPNPGKSSIPKCRGKSSSITTSDDPDLHIPIAIRKPVRSCTKH 662
P P E EP P HP P K P + + TT D H P A ++ + K
Sbjct: 887 PNRNPTNEIEPTPAP--HPKPVK---PTTTTTTPNRTTVSDAS-HQPTAPQQNQHNM-KT 939
Query: 663 PMAKFVSYSNLSSSFAAFTSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIM 722
+ N S A S E P NV +ALK KW+ A+ +E A ++N TW ++
Sbjct: 940 RAKNNIKKPNTKFSLTATLPNRSPSE-PTNVTQALKDKKWRFAMSDEFDAQQRNHTWDLV 998
Query: 723 TLPAGKNTVGCKWVFTVKYNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVRV 782
+ + VGCKWVF +KY + +++YKARLVAKGF Q YG+DY+ETF+PV K T+R+
Sbjct: 999 PHES-QLLVGCKWVFKLKYLPNGAIDKYKARLVAKGFNQQYGVDYAETFSPVIKSTTIRL 1057
Query: 783 LLSLAVNLDWPLNQLDVKNAFLNGDLQEEVYMDSPPGFEDKFG-LNVCKLQKSLYGLKQS 841
+L +AV DW + QLDV NAFL G L EEVYM PPGF DK +VC+L+K++YGLKQ+
Sbjct: 1058 VLDVAVKKDWEIKQLDVNNAFLQGTLTEEVYMAQPPGFIDKDRPTHVCRLRKAIYGLKQA 1117
Query: 842 PRAWFEKFTWSVKKQGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLK 901
PRAW+ + + G++ + SD +LF+ + + ++VYVDDII+TG D +D +
Sbjct: 1118 PRAWYMELKQHLFNIGFVNSLSDASLFI-YCHGTTFVYVLVYVDDIIVTGSDKSSIDAVL 1176
Query: 902 KNLAKEFEIKDLGALKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELN 961
+LA+ F IKD L YFLG+E R+++G+ + QRKYI DLL + M+ +P TP+ +
Sbjct: 1177 TSLAERFSIKDPTDLHYFLGIEATRTKQGLHLMQRKYIKDLLAKHNMADAKPVLTPLPTS 1236
Query: 962 AKLWEKGNVPV-DIGRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRIL 1020
KL G + D Y+ +VG L YLA TRPDIA++V+ +SQ M P E+H +A R+L
Sbjct: 1237 PKLTLHGGTKLNDASEYRSVVGSLQYLAFTRPDIAYAVNRLSQLMPQPTEDHWQAAKRVL 1296
Query: 1021 RYLKSNPGKGLYFKKTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGV 1080
RYL G++ T+ ++ F+DADWAG D ST Y Y+ N ++W SKKQ
Sbjct: 1297 RYLAGTSTHGIFLDTTSPLNLHAFSDADWAGDSDDYVSTNAYVIYLGKNPISWSSKKQRG 1356
Query: 1081 VARSSAEAEFRAMAQGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRT 1140
VARSS E+E+RA+A E+ W+ LL +L +++ + +FCD+ A + NPV H R
Sbjct: 1357 VARSSTESEYRAVANAASEVKWLCSLLSKLHIRLPIRPSIFCDNIGATYLCANPVFHSRM 1416
Query: 1141 KHIEIDRHFIKEKIVSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGMTNI 1195
KHI ID HF++ I SG + + +V++ +Q AD LTK L+R +F+ K+G+ +
Sbjct: 1417 KHIAIDYHFVRNMIQSGALRVSHVSTRDQLADALTKPLSRAHFQSARFKIGVRQL 1471
Score = 81.6 bits (200), Expect = 2e-15
Identities = 91/401 (22%), Positives = 150/401 (36%), Gaps = 99/401 (24%)
Query: 92 NILKFEVQRLDGKNYMEWSQTVRLILDGKGKLGFITGEIQMPSTT---------DPNYRF 142
NI V +L NY+ WS + +LDG G + G I+ P+ T +P Y
Sbjct: 25 NINTSNVTKLTSNNYLMWSLQIHALLDGYELAGHLDGSIETPAPTLTTNNVVSANPQYTL 84
Query: 143 WKSENSTIIAWLLSTMESTIKKPYMFLPTAKNVWDAVKATYSDIQNSSRIFDLKSRLWQA 202
WK ++ I + L+ + ++ A +W + TY+ + I L++++ Q
Sbjct: 85 WKRQDRLIFSALIGAISPPVQPLVSRATKASQIWKTLTNTYAK-SSYDHIKQLRTQIKQL 143
Query: 203 KQSDRDVTTYYNELMALWQELDLCYDDNWRCTEDSVLFLKRQENDRVFVLLAGLNNCLDE 262
K+ + + Y L +L ++L + ++V +L GL
Sbjct: 144 KKGTKTIDEYVLSHTTLLDQL-------------AILGKPMEHEEQVERILEGLPEDYKT 190
Query: 263 VRGRILGRIPLPTLQETFSEVRREEARQSVMMGKSASITESSALV--------------- 307
V +I G+ P++ E + EA+ S+S SA V
Sbjct: 191 VVDQIEGKDNTPSITEIHERLINHEAKLLSTAALSSSSLPMSANVAQQRHHNNNRNNNQN 250
Query: 308 ---TKGN--------EEGKRDGKKPF------CDHCNRQWHTRDTCWKLHGKPPNWKKKG 350
T+GN + G++PF C CN Q H+ C +L P+
Sbjct: 251 KNRTQGNTYTNNWQPSANNKSGQRPFKPYLGKCQICNVQGHSARRCPQLQAMQPS----- 305
Query: 351 GKEGRALQATTSDQEHQSSSSSFPFTKEQLDQLYKMFGSQTPSCSIAQIGNFPNTALVSV 410
SSSS+ FT Q P ++A P TA
Sbjct: 306 -----------------SSSSASTFTPWQ------------PRANLAM--GAPYTA---- 330
Query: 411 KPSPTWIIDSGATDHMTGESSLFASYSPCAGNHKIKIADGS 451
W++DSGAT H+T + + A + P G+ + IADG+
Sbjct: 331 ---NNWLLDSGATHHITSDLNALALHQPYNGD-DVMIADGT 367
>At1g48710 hypothetical protein
Length = 1352
Score = 436 bits (1122), Expect = e-122
Identities = 222/509 (43%), Positives = 329/509 (64%), Gaps = 11/509 (2%)
Query: 690 PKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMTLPAGKNTVGCKWVFTVKYNSDNTVER 749
P + QEA++ W+ A+ EE+++++KN TW++ +LP G T+G KWV+ K NS VER
Sbjct: 838 PMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKTIGVKWVYKAKKNSKGEVER 897
Query: 750 YKARLVAKGFTQAYGIDYSETFAPVAKLNTVRVLLSLAVNLDWPLNQLDVKNAFLNGDLQ 809
YKARLVAKG+ Q GIDY E FAPVA+L TVR+++SLA W ++Q+DVK+AFLNGDL+
Sbjct: 898 YKARLVAKGYIQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVKSAFLNGDLE 957
Query: 810 EEVYMDSPPGF-----EDKFGLNVCKLQKSLYGLKQSPRAWFEKFTWSVKKQGYMQAQSD 864
EEVY++ P G+ EDK V +L+K+LYGLKQ+PRAW + K++ +++ +
Sbjct: 958 EEVYIEQPQGYIVKGEEDK----VLRLKKALYGLKQAPRAWNTRIDKYFKEKDFIKCPYE 1013
Query: 865 HTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGALKYFLGMEV 924
H L+++ + I I +YVDD+I TG++ + KK + KEFE+ D+G + Y+LG+EV
Sbjct: 1014 HALYIKIQKED-ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGLMSYYLGIEV 1072
Query: 925 ARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELNAKLWEKGNVP-VDIGRYQRLVGK 983
+ GI ++Q Y ++L++ M P TPME KL +K VD ++ LVG
Sbjct: 1073 KQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGS 1132
Query: 984 LIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFKKTNDRDVSI 1043
L YL TRPDI ++V VVS++M P H +A RILRY+K GL++ T+D +
Sbjct: 1133 LRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVG 1192
Query: 1044 FTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMAQGICELLWI 1103
++D+DW G V DRKST+G+ Y+ TW SKKQ +V S+ EAE+ A +C +W+
Sbjct: 1193 YSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWL 1252
Query: 1104 QKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRTKHIEIDRHFIKEKIVSGTICLPY 1163
+ LL+EL L + P K+F D+K+AI++A NPV HDR+KHI+ H+I+E + + L Y
Sbjct: 1253 RNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECVSKKDVQLEY 1312
Query: 1164 VTSNEQTADILTKSLARPNFERLIVKLGM 1192
V +++Q ADI TK L R +F ++ LG+
Sbjct: 1313 VKTHDQVADIFTKPLKREDFIKMRSLLGV 1341
Score = 32.7 bits (73), Expect = 1.3
Identities = 17/44 (38%), Positives = 24/44 (53%), Gaps = 3/44 (6%)
Query: 416 WIIDSGATDHMTGESSLFASYSPCA-GNHKIKIADGSLSAIAGK 458
W +DSGA++HM G S+FA GN + + D S + GK
Sbjct: 335 WYLDSGASNHMCGRKSMFAELDESVRGN--VALGDESKMEVKGK 376
>At1g58140 hypothetical protein
Length = 1320
Score = 436 bits (1121), Expect = e-122
Identities = 223/518 (43%), Positives = 333/518 (64%), Gaps = 11/518 (2%)
Query: 681 TSQLSTVEIPKNVQEALKIPKWKEAVLEEMRALEKNKTWKIMTLPAGKNTVGCKWVFTVK 740
+SQ+ P + QEA++ W+ A+ EE+++++KN TW++ +LP G +G KWV+ K
Sbjct: 797 SSQIEEKCEPMDFQEAIEKKTWRNAMDEEIKSIQKNDTWELTSLPNGHKAIGVKWVYKAK 856
Query: 741 YNSDNTVERYKARLVAKGFTQAYGIDYSETFAPVAKLNTVRVLLSLAVNLDWPLNQLDVK 800
NS VERYKARLVAKG++Q GIDY E FAPVA+L TVR+++SLA W ++Q+DVK
Sbjct: 857 KNSKGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETVRLIISLAAQNKWKIHQMDVK 916
Query: 801 NAFLNGDLQEEVYMDSPPGF-----EDKFGLNVCKLQKSLYGLKQSPRAWFEKFTWSVKK 855
+AFLNGDL+EEVY++ P G+ EDK V +L+K+LYGLKQ+PRAW + K+
Sbjct: 917 SAFLNGDLEEEVYIEQPQGYIVKGEEDK----VLRLKKALYGLKQAPRAWNTRIDKYFKE 972
Query: 856 QGYMQAQSDHTLFMRFSNDGKIAILIVYVDDIILTGDDIVEMDRLKKNLAKEFEIKDLGA 915
+ +++ +H L+++ + I I +YVDD+I TG++ + KK + KEFE+ D+G
Sbjct: 973 KDFIKCPYEHALYIKIQKED-ILIACLYVDDLIFTGNNPSMFEEFKKEMTKEFEMTDIGL 1031
Query: 916 LKYFLGMEVARSRKGIVVSQRKYILDLLEETGMSGCRPADTPMELNAKLWEKGNVP-VDI 974
+ Y+LG+EV + GI ++Q Y ++L++ M P TPME KL +K VD
Sbjct: 1032 MSYYLGIEVKQEDNGIFITQEGYAKEVLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDP 1091
Query: 975 GRYQRLVGKLIYLAHTRPDIAFSVSVVSQFMHSPYEEHLEAVYRILRYLKSNPGKGLYFK 1034
++ LVG L YL TRPDI ++V VVS++M P H +A RILRY+K GL++
Sbjct: 1092 TTFKSLVGSLRYLTCTRPDILYAVGVVSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYS 1151
Query: 1035 KTNDRDVSIFTDADWAGSVIDRKSTTGYCAYVWGNLVTWRSKKQGVVARSSAEAEFRAMA 1094
T+D + ++D+DW G V DRKST+G+ Y+ TW SKKQ +V S+ EAE+ A
Sbjct: 1152 TTSDYKLVGYSDSDWGGDVDDRKSTSGFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAAT 1211
Query: 1095 QGICELLWIQKLLEELKLKIDLPLKLFCDSKAAISIAHNPVQHDRTKHIEIDRHFIKEKI 1154
+C +W++ LL+EL L + P K+F D+K+AI++A NPV HDR+KHI+ H+I+E +
Sbjct: 1212 SCVCHAIWLRNLLKELSLPQEEPTKIFVDNKSAIALAKNPVFHDRSKHIDTRYHYIRECV 1271
Query: 1155 VSGTICLPYVTSNEQTADILTKSLARPNFERLIVKLGM 1192
+ L YV +++Q ADI TK L R +F ++ LG+
Sbjct: 1272 SKKDVQLEYVKTHDQVADIFTKPLKREDFIKMRSLLGV 1309
Score = 32.7 bits (73), Expect = 1.3
Identities = 17/44 (38%), Positives = 24/44 (53%), Gaps = 3/44 (6%)
Query: 416 WIIDSGATDHMTGESSLFASYSPCA-GNHKIKIADGSLSAIAGK 458
W +DSGA++HM G S+FA GN + + D S + GK
Sbjct: 335 WYLDSGASNHMCGRKSMFAELDESVRGN--VALGDESKMEVKGK 376
Database: ara_mips
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,978,382
Number of sequences in database: 6832
Database: /data/blast2/ara_mips_chr2
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,737,135
Number of sequences in database: 4184
Database: /data/blast2/ara_mips_chr3
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,236,886
Number of sequences in database: 5377
Database: /data/blast2/ara_mips_chr4
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 1,748,816
Number of sequences in database: 4030
Database: /data/blast2/ara_mips_chr5
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 2,569,679
Number of sequences in database: 6098
Database: /data/blast2/ara_mips_chl
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 25,951
Number of sequences in database: 85
Database: /data/blast2/ara_mips_mit
Posted date: Jul 15, 2004 10:29 AM
Number of letters in database: 21,747
Number of sequences in database: 113
Lambda K H
0.315 0.133 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,923,397
Number of Sequences: 26719
Number of extensions: 1393193
Number of successful extensions: 18128
Number of sequences better than 10.0: 420
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 89
Number of HSP's that attempted gapping in prelim test: 6640
Number of HSP's gapped (non-prelim): 3627
length of query: 1199
length of database: 11,318,596
effective HSP length: 110
effective length of query: 1089
effective length of database: 8,379,506
effective search space: 9125282034
effective search space used: 9125282034
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)
Medicago: description of AC145330.14